Cla006712 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla006712
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	COP9 signalosome complex subunit 7 (AHRD V1 -- F4HVW0_ARATH); contains Interpro domain(s) IPR000717 Proteasome component region PCI
Location	Chr6 : 3563535 .. 3572343 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATTGAGCAGAAGCAAACCGAGTTCATCGATCAGTTTGTAAAACAAGCTTCCTCTCTGAAAGGCTCCGCACTTGCGTCTGTTGTTACTGAGGCCACTTCTCACCCTTCCCTCTTCGCCTTCTCGGAAGTTCTTGCCGTTCCCAACGTCATCGTTCCCCCCCCCCCCCCCCCCCACCTTTTCACTGCTAGGTTTATTTTGTGCGAGTTGTTATTGGGTTTTCTTTTGTTCTATGTAATTCTTGCCTGGTTGATTGGGGAAGAATGTTTACAGGTGCATTAAGTGGGAAAATGTCGATCTATTTATTTATTTAAATTACATCGATAGGGATATGAATGATATATGTTGATTGCTTGAGAAACTAAGCCGATGAAGTGTATTATCTTTTTAATATTATTATTATTATTATTAATTGATTCTAGCTGAGAAAAGTAGGCTACGAAATACCTTTTTGTTCCAATAATGGATGTCTCCGCCTTCCTAACTTATGTTGCTAAACTATGAAGTGAAGTTAAATTTATCGTACATTTTAAAGCTGCGTAGATATTATTTCCAGTTAAAATACCACTTCTGTCAAGAAGAATGAGAACAACAACAAAAACCAAGCTATACAAAAATCAGGAAGGCTCCCTCGGACTTAAAAGTGGGTGTTACCAATCAAATCAAATTGATAAATTTCTGAATTGTACCAACCCATACCCAATAGTTTTTGTTTGGTTAGTTTTTCAACATATTATGTATTGAATCAAACTGAAACAAATGGATATTGCTCTTCATTTATTGTATAATCCTTATTAACTCGTTATTTATCAATACTAAGTTGTTTTCTGAAAGAAAAAGAAATCTCATTTTAGCTGCTCTATTGGACCCACGACCACCCTTGGTTTGTTTCAGTCAATCTTCCTCACCTGTATCTTCTTTCGTTTTTGATATATTGCTGCAAGATAGAGATGCAATCTTAGATGGCCTACACATTCAGCTTACACAAACTCAATGATTAAAGAAAAGTTCGACTGGTAAACACCACAGAGATGTTGAATTTGAAGTTGGCGACTCTGTTTTCTATGCTCATTCATTTGTAGTATCATTGTTCATTTATGGTTCTTGAAAGGTGGCATACAAGCTGCAACTGCCACCTACGTCGGAAATACACTCAATATTCTATGTCTCCCAACTCAAGGCAGACAAAGGTTGTCAATTATGGCTGAAATGGTTACCAACTAAAATGTGTCCTAAGTTTGAACTTCTGCCCTCCTGGGAACTCACCTGTCACTGTTGGTCTAATGCAAGGCTTATATGTGTTCGTTTAGTAGGTAGAACAATAACCTAAGGAAGCTATAGAGAAGACCTCAATCTCATCAATAGTTATTCTGCGTCTTTCACCTAGAAGGCAAGCTAAAGTTTGGATCAGTGGTTTGGATAGGAACCTTAGGCTGTGCGTACATATCATTTTAGGAGAAATGTGCCTAACATGATTGGGTTGTGTGATGCAACGTAGGGTGTGTGAATAAGGATGGGAGATGATTTTGTTAAATGATTAGAGTTTGTGGGCCTAAGAGGATGTATGTTAAGAGTAGGTAATGTGTTAGACATTCGGTCAGTTGTGGGCCCAAGTTGATAGATGGTAACTCAGCTCCTAGCGCTTGTGGTGAGTTCTAAGCCTTTTGAAGTGTTTGCGTTGTTTTTCTTTGGCTTTTTGTTGAGTTCAATTCTACTTATTTCATTTGATTTATTTATTTTTATTCTTTGCTATTCATGCATCCCTATGAAGAAAATGTGATCTATATGGACTAAAGGTAATTACTCCACAATTTTCTTGGTTTCTTTTTCCTTAATGCTTTGGCTACTAGAGTGGTGGTGGGTAATTCTTATTTATTTATTTTAAATGAATAAATAAAGATTATTTTTTATTCGTTATTTAATTATTTTTGAATATGTTCTTTTTGGGTTAATAAAGTGGCGGTGTTAATCAAATGTTTTTAGTGGATTGTTTTAACACCTTCGAATTGTAAAATGAATTCATTTTAATTGATGTTCTTCTTTGCAGTTAGAAGGAACTGAGCATTCTGTATATCTTGACGTGCTTCGCTTATTTGCATATGGAACATGGAGTGATTACAAGAGTAAGAGTTAAACTTTTATAAGATTCGTGGTATAATTTGAATGTTATCACTAAGTTTTATGTGTCTGATGTTGCAAAAAGACATTTATTTAAATATAAGTTGGTCAAGGATGTCATAAAGTTTTATTTATCTATTTTATTTGGTTTTGTTAAGAACTTGGATGCCCAAATTGACAGTTAAATTAGTGCTAGAATACTTAAATATTTCTTCATGAAAGTTCTGTTTCTTATAAATGCTCGTTCTGCTTGTTACCACTTACCATTTCGATATGGAATCTTGTATGTGGTTTTTCATTTCATTTTCAAAAGGAAGTTATTATCGATGATGTAGGTGCTTAATGCCTCAATAAGCCTAAGTGACAAGAGCAAACATTGCATGTCAATGCATGAGGCTATGGGCAAACTCACGCTTTCTTCATAGAGGGATAAACCTCAAACTCTTATTATGCCTCGGCCTTGATTTTGTAAATGTATGTTCAAAGATATGAACTCCCATCAGGAGTGAAATGAAACAAGAACAAAATTGCAAACCTTCTAAGGAGCATAAAAATGCAAAAGAGTTCCCAGTTGAATCAATATTATTGAAGAGTAATAACCAATATTTTAAAGGAAAATTATTATAAATAGAAAAAATATCAAACTATTTATAAATATAGAAAAATTTCACTGTCTATTAGCGATAGACCACGATAGACTTCTATCGCTTAAGCGATAGATGTCTATCGCGGTCTATTGCTAATAGTTAAGCTATAGAAGTCTATCGCGGTCTATTGCTAATAGACGGTAAAATTTTTCTATATTTGTAGATAGTTTGACTCATTTTGTTATATTTAAAAATAACCCTATTTTAAAAGGCTTAAGACGGTCTCAAGGAGTTTTGTTATGGAAAGGCGAGGCATAATCCTTGAGGCGGTATGGAGTGTAAGCCTCATTTTGAATTAAAAATATATTCTTAAAATTATAGGGGGTGTTTGTTTCAAGGGTTGGATTGGATGGGTTAGGCATCCTAAGCCCAACCCTTGTTTAGGGCAAGGATCTAGGAAGCCTTGGCTTCCTATATCTTTTCCCGTGGGTTTGAATAGTAAACACTATCCAAACCCATGGGTTACCCTTCTTTTTCTTTTCTCTCCCTAATTTAATTTAGAAAGTTTGCCGGCCATCTTCTGAAACCACCTTGGGTGACCGCCGTTGGTCAACTCCAACGGCCACCTCCTGATGATTGTCGCCAGTCAACCTCCGACAACTCCTCTCCCCTTCCCCCCGCTGGCAAACTTCTGGCCACCAACTTTGCCGGCCAACCTTCGACTGCCACCTTCGGCGACCTCCATTGGCCAACCTTGAAAAACATTAACAAAGGGTAATTGCATTGGATAGCACTTTTAGGGATAATAATTAGGTGTATAGTAACATTTTAAAAAAAATTTGCAAATATAGCAAAATCTATTAATGATAGACTTCTATCAGTGGTATGGTCTATCACTGATAGACTTTGAAACAAAATCTAAATTTTGCTATATTTGCAATTTTTTTTTGTATTGTGCTATATTTGTAAATACTTTGAATATGATTGCTATATTTGCAACTGCCCCTTAATAAAAACACTCTTAGTATATAACAAACTAAACAAACTTGTATATAAAAACACTTTTAAGAAAGAGTTGTCAAATACATGTTTGTTTTTATTAAAAGTGTTTAAATAAAAAAATGTTTTGAAAAACATTTTTTTCTAAGTCATTCCAAACAAGCCATTGGCTTCAATTGTATACTTAGGTATATTTATTTAGGCTATATGTTTAGAAAACCCTAATTTAATCTAATAATATTTTCATTTTTTTTTCGTTGGTCAATTTAACTAGCTCGAAAACTTAGAATCATTTTTTAAATATGAAGGTTTACAATGTTGCAAACAACTTAGTGGTCAAATAAAAATCAAAACTCAATATTTATGATTCTTTATTCGTAGAAACTATAGTTTTTCAATAATTGAATTTAACATAAAAATACTAATTTATTTCAATTTTAAGTTAGCATATTATAGTTAAAAAATTGATCATTTTCAAATTAGTTAAAGTGACAAAAGTCCACGAAATTTTATAGTAAAATTAAAATATCAAATTATTAAAAATAATAAATTAAATAAATTATAATTTTTGTCAAAAATCTCTATTTCAAAATTCAAAAAGAAAATTATTATTCTAAATTTTTTAGTTTGTTTTAATTAAGATGACAAATTTAAACAAATCTGAAATCTAATCACCGATCAAATACAAGAACATATTTCACAAACTCAAGATTTATAAATCTGCACTTCATTCCCAGGCTTTCTAAGTCTGTACTCCAAACATAGGCTTCTTGAACCTAGACTTCCAAAACCAAAACCTGCACTCCAAATACAGTTTTATTAAACCCAGGCTACCTAAACCTCTCAGCCTAACCCCCAGGCTTAAGATTCCAAACTTGCGTGCCAAACACCCCCATAGTGTTCTCGAGGGTTTTTGGTTGGGAAGGATATGGTGGCCCTTTATCTCCTCTGGTTTGCCAGCGATACATTTCTTTTTTTTCTTGGAAGAGAGGAGTATTTTTAGTATTTTTAGGCTTTTTTTTTTTAAATTTATTTTTTATTTTTATAATATGAACCAAAATTTTTCGTTTGAGGCCATTTCAAATCTTAAGATTAACATAGGAAAAAGTCATATTATCGGGCTAAATTGCAACTCCTCAAGCTCTGCAGATGCACGTCCTTTTGTGGGGTTGTGAGGTCGATGCTTTTCCTTCTTCCTATCTAGGTCTTCCCCTTGGTCATAACTCTAGGACCCTCTTGTTTTGGGACTATCATCGAGTAAAGTTCATAGGAGGCTCGGCTCACCTCTTGGAAAACGAGCTTTTCTCGAAAGGTGGAGACTTACCCTTATTTATTTGGTTTTGAGTGGTATTTCTACCTACTTGATGACCCAATTTAGAGTCCCTAGCATGGTTGGTAAGGTTCTTGGGAAGTTAATGAGGGATTTCTTATGGGAGGGATTGGCGAGGGAAATGGCTCACATCTTGTGCGTTGGAAGGTGGTTTCTAGGTTGTTGGACCAAGGGCTAGCTGAATGCCTCTGGCGTTTCAATCATGAAGCTGATACCTTATGGTGCAAGGTTTTATGTGCGGTAGGTTTTGCATGGAAGAGTTAACACCTTGGATCAAATTCGGCCTAAGGGTTCGTTTTGGTTGGGCCACATGGTTGTTTTCTTTGTAGGAAGGTGACTGAAGACCTTGATCATATCCTTGGGGTTGTGATTGTGCTTGAGTAATGTGTGGTTTGTTCATGGTGTTTTGCTATAGTTTTGTTAGCTTTTCAGGTGCAGGGAGACGATTGAGGAGCTTCTCCTTCGTTTGCAATTTCGTGAGAGAGTTCCTTTTGTGGCAGGTTAAGGTTTGTGCTATTCTGTGGGGATTGTGGGGGTGAGCGAACCAATAGAATCTCCATGGGCAGGAGTGATCATTCAACAATTTTGGTCCCTTGTTAGATTTTCTATTCTCGATGTCTAGGCCTTTTTGTAATTACTCCTTAGGTTTACTTGTAACTTACTCCCTTTTTGTGCTTTTTCTTTTATGTATGCTCGTGATTTCTTTCATTTTCTTTATGGAAGTCCGATCTTTTCATTAAAGAAGGATATCATAACCTATTTAACCTTTGCTTCCATCAATTAATTTTCTTTAGCTACAATTTCGTTGTTATACTCCAACTTTGAGGTGTGTACTGTTGATGAACTACATGCAATTCAAGTTTGTCAATGGTATATTTTGCAGGTAATTCCAGCCGCCTTCCAGAATTGGGCACTGATCAAGCCCTCAAACTAAAGCAACTTACTGTCCTTACATTGGCTGAGACAAACAAGGTATTCCTGCTGCACATTTGATCACATTTCCTTAACCCACTTGCAGATATATCTGGCTGATTTGTTGCGCCAAGAAAAAGATATATCTGGCTGATTTGAATTAGTTTGTAGTTCTGTTCTGCCTCACCTTTTGTGGATCTAACAACTTGTTGGAGTTGATGTAGAACGAACCATTGAGCTGGATTTAGAGGTGCAATAGTCTGTGGGTACATTGAAATCTAGTAGTTTAAAAGGTTCTGAAAAAAACTTTAATTGGGAAAATTATTTTGAAATTTTGGGAACTAATTATTATAAAAAGTAATATCTTTTGGAGGGTTTCAGAGCCCTTTGAAGCCTAAGCACGAGCATCAGTGAAGTAAGGTGTATTATATATAAGAAACCATAAATATTAGATTTATAAAATATAGTATTTTTTAAGAGGTCATGGGTTCAATCCATGGTGGTCACCTACCTAAGATTTAGTATCCTACGAGTTTCCTTGACACCTAAATGTTGTAAGGTTAGGTGGGTTGTCCTATGAGATTAGTTGAGGTGCGCGTAAGCTGGTCTGGACACTCATGGATAAGAAAAAATAATAATAAATAAAATATAGTATTTTGAACTATGAGGTAAAAAGAAAAAAAAGGAACCTGGTATTTGTTTAAGGATTAATAATAAATAAAATATAGTATTTTGAACTATGAGGTAAAGGAAAAAAAAGGAACCTGGTATTTGTTTAAGGATTAATCTTTGTTCTATTAAACATAGTCTTCTCAACCCCTTGCCCTTAGGTTCTCCTTTGTTCTCTGATGAAATATACCCGTTTGTTTATTTAAAAAAAAAAGCTGGATCTGGATAGTTTCTATGAAATTCTTGTTTCCTTTCAGTCTTTCTTTAGCAGCTAACTGTTAGTATATACTGAACATTGCTCCATTTTTCATAGGTTTCTTAAAAAAGCTTTTAGTTGATGATAAAATGTACATTCCTTGCATTCACCATTAAATTATTTCTCTATTCTGACTATTGATTTCATGCCCAGGTATTGGCCTATGACCAACTAATGCAGGAATTAGATGTTACAAATGTACGAGAACTGGAGGATTTTCTTATTAATGAATGCATGTACGCGGTATGTTCTACAGTTTGTACTTGATTGATTCTTCTTACTTCCAGTATTAGTATAATAGTACCAATCGGAACTTAGTTGATTCTCCTTGGCAGTATTATGATATTAGTACCCATGCGGCTTAATTGATTCCTCTTAGTTCTTACCAGTACTAGTATTGTATCTAAAAGGTCTTAGACCTATTTCACTTATATATTTTTTAAAATCGCATATTGACTAAACATAAAATTGAAATTTTAGGATTCCATTAGATATAAATTCAATTTTATATCTAATAGATATGTTATCAATTGATTTATTTCTTAAAAAATTGAATATTAGATCCAAAATTGAAAGTTTAGGGACTTTTTAGACACAAAATTGGAAGTTTAAGGGCCAAATAGACACAAATTTGAAAGTTGAGGGACTAAACTTATAATTTAACCTATGCATATTATTTTTCTACAGGAAGGTATATATTATTTCCATACAAGAAGGTAATTTAAAGCTGGTGCATTTATATCTAAAGAAACATGTTTGATGTAATTAACCCTCGATATTTATTATTTTTATGTTTATCCTTATGTTTCTACTTTTGTCTAATTTTTAGAAGTATATACCTAGAAAAAGGTTATATAAGCACAATTGTTATTCTTATGTTAACAGAGTGTTGCCACGTATTTATTGTACTTCATAAATATTAGACGTGTCCACCAAGTATGGATAACTCTCGTAACATTGCCATGATGTCATTTACGTGAAATTTTAGAGGGTTTTATACCAGTTAAATGATGTAAAGTCCAAAACCCTCAGACTCAGTGGCTCTTTGTACCTACTGCTATCTTAGGATTGGGACTCCCTTCATTCTTGGAGTCCTCAAAGGGGTTTGCATAACTTGCTAAACATTAAGATTTTTAATTTATTGAATTGGTTACTCATTTTTTTTGGGAGGAAGGATAAGCAATGCCCTTGAAATATCATGGACAAGGAGTGTATTCCCTGAAAATTTTCTTATTTGCTTACAGGGTATAGTCAGAGGAAAGTTGGATCAATTGCGAAGGTGCTTTGAGGTCTGTGCTTGTCTTGGTAGACTTGCTCTCAGAATATGGGCTTTATAAATTGCGACCATTGAAGTCCTTATATGCACATGCAGGTCCAGTTTGCTGCCGGGAGAGATTTGAGACCTGGGCAACTTGGAAGCATGATACGAACACTATCAAATTGGTAATTTACTTGTTTAAGTTTCATGGGGGGTCAGGCCCTTTTAAGGAAAGCACTTGCTCAAGAACTTGTTTTGTGCATGCCAGGAACGATCAACTGTGACCTTACCGAGTTTTATCCTAAATTGCTGAGATACTAGTTCTTTTGCTACCTCAAGTATCACGCATTTTAGTATTATTTGCAACTTCATTTCATATTCTTTTAATTAGTTAAGTTTCATAGTTGTATGTGTCCGTGTTTTTTTTCTTCTTTATTAACAATGAGTTGATTTTATAGCCCTTCTCTTGTCGTCTGCATTTGGTTGGGTGACATATATTTGAAATATGACAGTTCCTGTGTGTATCTAGGTTGACTACGTCAGACAATTTATTGGTCTCTATTCAAGAAAAGATAAAATGGGCCGATAATATGAGCGAATTGGACAAGAAACACCGAAAGGATGTTGAAGATAGGGTGGAAGAAGTTAAGAAATCACTTTCCTTGAAGGTCAGTTGA

mRNA sequence

ATGGATATTGAGCAGAAGCAAACCGAGTTCATCGATCAGTTTGTAAAACAAGCTTCCTCTCTGAAAGGCTCCGCACTTGCGTCTGTTGTTACTGAGGCCACTTCTCACCCTTCCCTCTTCGCCTTCTCGGAAGTTCTTGCCGTTCCCAACGTCATCTTAGAAGGAACTGAGCATTCTGTATATCTTGACGTGCTTCGCTTATTTGCATATGGAACATGGAGTGATTACAAGAGGGGTGTTTGTTTCAAGGGTTGGATTGGATGGGTTAGGCATCCTAAGCCCAACCCTTGTTTAGGGCAAGGATCTAGGAAGCCTTGGCTTCCTATATCTTTTCCCTTTGCCGGCCATCTTCTGAAACCACCTTGGGTGACCGCCGTTGGTCAACTCCAACGGCCACCTCCTGATGATTGTCGCCAGTCAACCTCCGACAACTCCTCTCCCCTTCCCCCCGCTGGCAAACTTCTGGCCACCAACTTTGCCGGCCAACCTTCGACTGCCACCTTCGGCGACCTCCATTGGCCAACCTTGAAAAACATTAACAAAGGGACCCTCTTGTTTTGGGACTATCATCGAGTAAAGTTCATAGGAGGCTCGGCTCACCTCTTGGAAAACGAGCTTTTCTCGAAAGGTAATTCCAGCCGCCTTCCAGAATTGGGCACTGATCAAGCCCTCAAACTAAAGCAACTTACTGTCCTTACATTGGCTGAGACAAACAAGGTATTGGCCTATGACCAACTAATGCAGGAATTAGATGTTACAAATGTACGAGAACTGGAGGATTTTCTTATTAATGAATGCATGTACGCGGGTATAGTCAGAGGAAAGTTGGATCAATTGCGAAGGTGCTTTGAGGTCCAGTTTGCTGCCGGGAGAGATTTGAGACCTGGGCAACTTGGAAGCATGATACGAACACTATCAAATTGGTTGACTACGTCAGACAATTTATTGGTCTCTATTCAAGAAAAGATAAAATGGGCCGATAATATGAGCGAATTGGACAAGAAACACCGAAAGGATGTTGAAGATAGGGTGGAAGAAGTTAAGAAATCACTTTCCTTGAAGGTCAGTTGA

Coding sequence (CDS)

ATGGATATTGAGCAGAAGCAAACCGAGTTCATCGATCAGTTTGTAAAACAAGCTTCCTCTCTGAAAGGCTCCGCACTTGCGTCTGTTGTTACTGAGGCCACTTCTCACCCTTCCCTCTTCGCCTTCTCGGAAGTTCTTGCCGTTCCCAACGTCATCTTAGAAGGAACTGAGCATTCTGTATATCTTGACGTGCTTCGCTTATTTGCATATGGAACATGGAGTGATTACAAGAGGGGTGTTTGTTTCAAGGGTTGGATTGGATGGGTTAGGCATCCTAAGCCCAACCCTTGTTTAGGGCAAGGATCTAGGAAGCCTTGGCTTCCTATATCTTTTCCCTTTGCCGGCCATCTTCTGAAACCACCTTGGGTGACCGCCGTTGGTCAACTCCAACGGCCACCTCCTGATGATTGTCGCCAGTCAACCTCCGACAACTCCTCTCCCCTTCCCCCCGCTGGCAAACTTCTGGCCACCAACTTTGCCGGCCAACCTTCGACTGCCACCTTCGGCGACCTCCATTGGCCAACCTTGAAAAACATTAACAAAGGGACCCTCTTGTTTTGGGACTATCATCGAGTAAAGTTCATAGGAGGCTCGGCTCACCTCTTGGAAAACGAGCTTTTCTCGAAAGGTAATTCCAGCCGCCTTCCAGAATTGGGCACTGATCAAGCCCTCAAACTAAAGCAACTTACTGTCCTTACATTGGCTGAGACAAACAAGGTATTGGCCTATGACCAACTAATGCAGGAATTAGATGTTACAAATGTACGAGAACTGGAGGATTTTCTTATTAATGAATGCATGTACGCGGGTATAGTCAGAGGAAAGTTGGATCAATTGCGAAGGTGCTTTGAGGTCCAGTTTGCTGCCGGGAGAGATTTGAGACCTGGGCAACTTGGAAGCATGATACGAACACTATCAAATTGGTTGACTACGTCAGACAATTTATTGGTCTCTATTCAAGAAAAGATAAAATGGGCCGATAATATGAGCGAATTGGACAAGAAACACCGAAAGGATGTTGAAGATAGGGTGGAAGAAGTTAAGAAATCACTTTCCTTGAAGGTCAGTTGA

Protein sequence

MDIEQKQTEFIDQFVKQASSLKGSALASVVTEATSHPSLFAFSEVLAVPNVILEGTEHSVYLDVLRLFAYGTWSDYKRGVCFKGWIGWVRHPKPNPCLGQGSRKPWLPISFPFAGHLLKPPWVTAVGQLQRPPPDDCRQSTSDNSSPLPPAGKLLATNFAGQPSTATFGDLHWPTLKNINKGTLLFWDYHRVKFIGGSAHLLENELFSKGNSSRLPELGTDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNMSELDKKHRKDVEDRVEEVKKSLSLKVS

Homology

[Close]

BLAST of Cla006712 vs. Swiss-Prot
Match: CSN7_ARATH (COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7 PE=1 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 8.2e-63
Identity = 119/146 (81.51%), Postives = 131/146 (89.73%), Query Frame = 1


Query: 209 KGNSSRLPELGTDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 268
           K N++RLP L  DQ LKLKQLTVLTLAE+NKVL YD LM ELDV+NVRELEDFLINECMY
Sbjct: 78  KCNATRLPHLSPDQILKLKQLTVLTLAESNKVLPYDTLMVELDVSNVRELEDFLINECMY 137

Query: 269 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADN 328
           AGIVRGKLDQL+RCFEV FAAGRDLRPGQLG+M+ TLSNWL TS+NLL+SIQ+KIKWADN
Sbjct: 138 AGIVRGKLDQLKRCFEVPFAAGRDLRPGQLGNMLHTLSNWLNTSENLLISIQDKIKWADN 197

Query: 329 MSELDKKHRKDVEDRVEEVKKSLSLK 355
           MSE+DKKHRK+ E+ VEEVKKSLS+K
Sbjct: 198 MSEMDKKHRKEAEEGVEEVKKSLSMK 223

HSP 2 Score: 112.1 bits (279), Expect = 1.3e-23
Identity = 56/78 (71.79%), Postives = 62/78 (79.49%), Query Frame = 1


Query: 1  MDIEQKQTEFIDQFVKQASSLKGSALASVVTEATSHPSLFAFSEVLAVPNVI-LEGTEHS 60
          MDIEQKQ E IDQ VK+AS+ K  AL  ++ EATSHPSLFAFSE+LA+PNV  LEGT  S
Sbjct: 1  MDIEQKQAEIIDQLVKRASTCKSEALGPLIIEATSHPSLFAFSEILALPNVAQLEGTTDS 60

Query: 61 VYLDVLRLFAYGTWSDYK 78
          VYLD+LRLFA+GTW DYK
Sbjct: 61 VYLDLLRLFAHGTWGDYK 78

[Close]

BLAST of Cla006712 vs. Swiss-Prot
Match: CSN7_DICDI (COP9 signalosome complex subunit 7 OS=Dictyostelium discoideum GN=csn7 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.2e-23
Identity = 65/187 (34.76%), Postives = 104/187 (55.61%), Query Frame = 1


Query: 163 PSTATFGDL-HWPTLKNINKGTLLFWDYHRVKFIGGSAHLLENELFSKGNSSRLPELGTD 222
           PS   FG+L   P ++ + +    F +Y+ +  I      ++     K     LP+L   
Sbjct: 40  PSVFVFGELLDMPNVQQLKETE--FKNYYDLLLIFAYGSFIDY----KNKKDSLPQLTPQ 99

Query: 223 QALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMYAGIVRGKLDQLRR 282
              KLKQLT++ L+ T+ V+ Y  L +++++TNVRELED +I+  +Y  I++GKLDQ  +
Sbjct: 100 MITKLKQLTIVFLSSTSNVIPYSVLQEQIEITNVRELEDLIIDS-IYQNIIKGKLDQKNK 159

Query: 283 CFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNMSELDKKHRKDVE 342
             E+ F+ GRD++P QL SMI  L+NW +TS  LL  I   I  +D +    +K +++ E
Sbjct: 160 HLEIDFSIGRDVQPEQLDSMINCLNNWSSTSQKLLDDISGLITHSDKVHLQYRKEKEEFE 219

Query: 343 DRVEEVK 349
            + E  K
Sbjct: 220 SKFEIAK 219

HSP 2 Score: 65.5 bits (158), Expect = 1.4e-09
Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 1


Query: 11 IDQFVKQASSLKGSALASVVTEATSHPSLFAFSEVLAVPNV-ILEGTEHSVYLDVLRLFA 70
          + QFV  A S KG A+ S++ +A +HPS+F F E+L +PNV  L+ TE   Y D+L +FA
Sbjct: 14 LKQFVVLAKSSKGRAIVSIIEKALNHPSVFVFGELLDMPNVQQLKETEFKNYYDLLLIFA 73

Query: 71 YGTWSDYK 78
          YG++ DYK
Sbjct: 74 YGSFIDYK 81

[Close]

BLAST of Cla006712 vs. Swiss-Prot
Match: CSN7B_BOVIN (COP9 signalosome complex subunit 7b OS=Bos taurus GN=COPS7B PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.4e-22
Identity = 54/146 (36.99%), Postives = 87/146 (59.59%), Query Frame = 1


Query: 211 NSSRLPELGTDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMYAG 270
           N   LPEL T Q  KLK LT+++LA   K + Y  L+++L++ N+RELED +I E +Y  
Sbjct: 81  NKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLRELEDLII-EAVYTD 140

Query: 271 IVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNMS 330
           I++GKLDQ  +  EV F  GRD+R   + ++++TL  W    + +L+ I++++  A+   
Sbjct: 141 IIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYK 200

Query: 331 ELDKKHRKDVEDRVEEVKKSLSLKVS 357
           E   + ++ VE  V  +KK+L    S
Sbjct: 201 ENHSRTQQQVEAEVTNIKKTLKATAS 225

HSP 2 Score: 55.1 bits (131), Expect = 1.9e-06
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 1


Query: 4  EQK-QTEFIDQFVKQASSLKGSALASVVTEATSHPSLFAFSEVLAVPNV--ILEGTEHSV 63
          EQK  +  ++QF+  A    GSAL +++++    P ++ F E+L + NV  + EG  ++ 
Sbjct: 4  EQKPSSNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGA-NAA 63

Query: 64 YLDVLRLFAYGTWSDY 77
          YL +L LFAYGT+ DY
Sbjct: 64 YLQLLNLFAYGTYPDY 78

[Close]

BLAST of Cla006712 vs. Swiss-Prot
Match: CSN7B_HUMAN (COP9 signalosome complex subunit 7b OS=Homo sapiens GN=COPS7B PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.4e-22
Identity = 54/146 (36.99%), Postives = 87/146 (59.59%), Query Frame = 1


Query: 211 NSSRLPELGTDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMYAG 270
           N   LPEL T Q  KLK LT+++LA   K + Y  L+++L++ N+RELED +I E +Y  
Sbjct: 81  NKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLRELEDLII-EAVYTD 140

Query: 271 IVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNMS 330
           I++GKLDQ  +  EV F  GRD+R   + ++++TL  W    + +L+ I++++  A+   
Sbjct: 141 IIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYK 200

Query: 331 ELDKKHRKDVEDRVEEVKKSLSLKVS 357
           E   + ++ VE  V  +KK+L    S
Sbjct: 201 ENHNRTQQQVEAEVTNIKKTLKATAS 225

HSP 2 Score: 55.1 bits (131), Expect = 1.9e-06
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 1


Query: 4  EQK-QTEFIDQFVKQASSLKGSALASVVTEATSHPSLFAFSEVLAVPNV--ILEGTEHSV 63
          EQK  +  ++QF+  A    GSAL +++++    P ++ F E+L + NV  + EG  ++ 
Sbjct: 4  EQKPSSNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGA-NAA 63

Query: 64 YLDVLRLFAYGTWSDY 77
          YL +L LFAYGT+ DY
Sbjct: 64 YLQLLNLFAYGTYPDY 78

[Close]

BLAST of Cla006712 vs. Swiss-Prot
Match: CSN7B_MOUSE (COP9 signalosome complex subunit 7b OS=Mus musculus GN=Cops7b PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.0e-21
Identity = 53/146 (36.30%), Postives = 86/146 (58.90%), Query Frame = 1


Query: 211 NSSRLPELGTDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMYAG 270
           N   LPEL   Q  KLK LT+++LA   K + Y  L+++L++ N+RELED +I E +Y  
Sbjct: 81  NKESLPELSVAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLRELEDLII-EAVYTD 140

Query: 271 IVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADNMS 330
           I++GKLDQ  +  EV F  GRD+R   + ++++TL  W    + +L+ I++++  A+   
Sbjct: 141 IIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYK 200

Query: 331 ELDKKHRKDVEDRVEEVKKSLSLKVS 357
           E   + ++ VE  V  +KK+L    S
Sbjct: 201 ENHHRTQQQVEAEVSNIKKTLKATAS 225

HSP 2 Score: 55.1 bits (131), Expect = 1.9e-06
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 1


Query: 4  EQK-QTEFIDQFVKQASSLKGSALASVVTEATSHPSLFAFSEVLAVPNV--ILEGTEHSV 63
          EQK  +  ++QF+  A    GSAL +++++    P ++ F E+L + NV  + EG  ++ 
Sbjct: 4  EQKPSSNLLEQFILLAKGTSGSALTTLISQVLEAPGVYVFGELLELANVQELAEGA-NAA 63

Query: 64 YLDVLRLFAYGTWSDY 77
          YL +L LFAYGT+ DY
Sbjct: 64 YLQLLNLFAYGTYPDY 78

[Close]

BLAST of Cla006712 vs. TrEMBL
Match: E5GCN7_CUCME (Cop9 complex subunit 7a OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 8.0e-73
Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 1


Query: 209 KGNSSRLPELGTDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 268
           K NSSRLPEL +DQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY
Sbjct: 78  KSNSSRLPELSSDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 137

Query: 269 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADN 328
           AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLG+MIRTLSNWLTTSDNLLVSIQEKIKWADN
Sbjct: 138 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIRTLSNWLTTSDNLLVSIQEKIKWADN 197

Query: 329 MSELDKKHRKDVEDRVEEVKKSLSLKVS 357
           MSELDKKHRKDV+DRVEEVKKSLSLKVS
Sbjct: 198 MSELDKKHRKDVDDRVEEVKKSLSLKVS 225

[Close]

BLAST of Cla006712 vs. TrEMBL
Match: E5GCN7_CUCME (Cop9 complex subunit 7a OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.7e-30
Identity = 70/78 (89.74%), Postives = 75/78 (96.15%), Query Frame = 1


Query: 1  MDIEQKQTEFIDQFVKQASSLKGSALASVVTEATSHPSLFAFSEVLAVPNVI-LEGTEHS 60
          MDIEQKQTEFID FVKQASSLKGSAL SVVT+ATSHPSLFAFSE+LAVP+V+ LEGTEHS
Sbjct: 1  MDIEQKQTEFIDHFVKQASSLKGSALGSVVTDATSHPSLFAFSEILAVPSVVELEGTEHS 60

Query: 61 VYLDVLRLFAYGTWSDYK 78
          +YLDVLRLFAYGTWSDYK
Sbjct: 61 IYLDVLRLFAYGTWSDYK 78

HSP 2 Score: 279.6 bits (714), Expect = 5.2e-72
Identity = 141/148 (95.27%), Postives = 145/148 (97.97%), Query Frame = 1


Query: 209 KGNSSRLPELGTDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 268
           K NSSRLPEL +DQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY
Sbjct: 78  KSNSSRLPELSSDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 137

Query: 269 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADN 328
           AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLG+MIRTLSNWLTTSDNLLVSIQEKIKWADN
Sbjct: 138 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIRTLSNWLTTSDNLLVSIQEKIKWADN 197

Query: 329 MSELDKKHRKDVEDRVEEVKKSLSLKVS 357
           MSELDKKHRKDV+DRVEEVKKSLSLK +
Sbjct: 198 MSELDKKHRKDVDDRVEEVKKSLSLKAN 225

[Close]

BLAST of Cla006712 vs. TrEMBL
Match: A0A0A0KFL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G104090 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 9.8e-31
Identity = 71/78 (91.03%), Postives = 75/78 (96.15%), Query Frame = 1


Query: 1  MDIEQKQTEFIDQFVKQASSLKGSALASVVTEATSHPSLFAFSEVLAVPNVI-LEGTEHS 60
          MDIEQKQTEFID FVKQASSLKGSAL SVVT+ATSHPSLFAFSE+LAVPNV+ LEGTEHS
Sbjct: 1  MDIEQKQTEFIDHFVKQASSLKGSALGSVVTDATSHPSLFAFSEILAVPNVVELEGTEHS 60

Query: 61 VYLDVLRLFAYGTWSDYK 78
          +YLDVLRLFAYGTWSDYK
Sbjct: 61 IYLDVLRLFAYGTWSDYK 78

HSP 2 Score: 263.5 bits (672), Expect = 3.8e-67
Identity = 133/146 (91.10%), Postives = 138/146 (94.52%), Query Frame = 1


Query: 209 KGNSSRLPELGTDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 268
           KGNS RLP+L  DQ LKLKQLTVLTLAETNKVL YDQLM ELDVTNVRELEDFLINECMY
Sbjct: 78  KGNSGRLPQLVPDQVLKLKQLTVLTLAETNKVLPYDQLMLELDVTNVRELEDFLINECMY 137

Query: 269 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADN 328
           AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMI+TLSNWL TSDNLL+SIQEKIKWAD 
Sbjct: 138 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLGTSDNLLISIQEKIKWADT 197

Query: 329 MSELDKKHRKDVEDRVEEVKKSLSLK 355
           MSELDKKHRK+VEDRVEEVKKSL+LK
Sbjct: 198 MSELDKKHRKEVEDRVEEVKKSLTLK 223

[Close]

BLAST of Cla006712 vs. TrEMBL
Match: A0A061E2E9_THECC (Proteasome component (PCI) domain protein isoform 2 OS=Theobroma cacao GN=TCM_005708 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.6e-23
Identity = 59/78 (75.64%), Postives = 69/78 (88.46%), Query Frame = 1


Query: 1  MDIEQKQTEFIDQFVKQASSLKGSALASVVTEATSHPSLFAFSEVLAVPNVI-LEGTEHS 60
          MDIEQKQ + ID FVKQAS+ +GSAL S++ EATSHPSLFAFSE+LAVP+V  LE TE+S
Sbjct: 1  MDIEQKQADLIDHFVKQASAQQGSALGSIILEATSHPSLFAFSEILAVPSVAELERTENS 60

Query: 61 VYLDVLRLFAYGTWSDYK 78
          VYL+VLRLFA+GTWSDYK
Sbjct: 61 VYLEVLRLFAHGTWSDYK 78

HSP 2 Score: 263.5 bits (672), Expect = 3.8e-67
Identity = 133/146 (91.10%), Postives = 138/146 (94.52%), Query Frame = 1


Query: 209 KGNSSRLPELGTDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 268
           KGNS RLP+L  DQ LKLKQLTVLTLAETNKVL YDQLM ELDVTNVRELEDFLINECMY
Sbjct: 78  KGNSGRLPQLVPDQVLKLKQLTVLTLAETNKVLPYDQLMLELDVTNVRELEDFLINECMY 137

Query: 269 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADN 328
           AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMI+TLSNWL TSDNLL+SIQEKIKWAD 
Sbjct: 138 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLGTSDNLLISIQEKIKWADT 197

Query: 329 MSELDKKHRKDVEDRVEEVKKSLSLK 355
           MSELDKKHRK+VEDRVEEVKKSL+LK
Sbjct: 198 MSELDKKHRKEVEDRVEEVKKSLTLK 223

[Close]

BLAST of Cla006712 vs. TrEMBL
Match: A0A061DUI6_THECC (Proteasome component (PCI) domain protein isoform 3 OS=Theobroma cacao GN=TCM_005708 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.6e-23
Identity = 59/78 (75.64%), Postives = 69/78 (88.46%), Query Frame = 1


Query: 1  MDIEQKQTEFIDQFVKQASSLKGSALASVVTEATSHPSLFAFSEVLAVPNVI-LEGTEHS 60
          MDIEQKQ + ID FVKQAS+ +GSAL S++ EATSHPSLFAFSE+LAVP+V  LE TE+S
Sbjct: 1  MDIEQKQADLIDHFVKQASAQQGSALGSIILEATSHPSLFAFSEILAVPSVAELERTENS 60

Query: 61 VYLDVLRLFAYGTWSDYK 78
          VYL+VLRLFA+GTWSDYK
Sbjct: 61 VYLEVLRLFAHGTWSDYK 78

HSP 2 Score: 263.5 bits (672), Expect = 3.8e-67
Identity = 133/146 (91.10%), Postives = 138/146 (94.52%), Query Frame = 1


Query: 209 KGNSSRLPELGTDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 268
           KGNS RLP+L  DQ LKLKQLTVLTLAETNKVL YDQLM ELDVTNVRELEDFLINECMY
Sbjct: 78  KGNSGRLPQLVPDQVLKLKQLTVLTLAETNKVLPYDQLMLELDVTNVRELEDFLINECMY 137

Query: 269 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADN 328
           AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMI+TLSNWL TSDNLL+SIQEKIKWAD 
Sbjct: 138 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIQTLSNWLGTSDNLLISIQEKIKWADT 197

Query: 329 MSELDKKHRKDVEDRVEEVKKSLSLK 355
           MSELDKKHRK+VEDRVEEVKKSL+LK
Sbjct: 198 MSELDKKHRKEVEDRVEEVKKSLTLK 223

[Close]

BLAST of Cla006712 vs. NCBI nr
Match: gi|307136429|gb|ADN34236.1| (cop9 complex subunit 7a [Cucumis melo subsp. melo])

HSP 1 Score: 282.3 bits (721), Expect = 1.1e-72
Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 1


Query: 209 KGNSSRLPELGTDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 268
           K NSSRLPEL +DQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY
Sbjct: 78  KSNSSRLPELSSDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 137

Query: 269 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADN 328
           AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLG+MIRTLSNWLTTSDNLLVSIQEKIKWADN
Sbjct: 138 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIRTLSNWLTTSDNLLVSIQEKIKWADN 197

Query: 329 MSELDKKHRKDVEDRVEEVKKSLSLKVS 357
           MSELDKKHRKDV+DRVEEVKKSLSLKVS
Sbjct: 198 MSELDKKHRKDVDDRVEEVKKSLSLKVS 225

[Close]

BLAST of Cla006712 vs. NCBI nr
Match: gi|307136429|gb|ADN34236.1| (cop9 complex subunit 7a [Cucumis melo subsp. melo])

HSP 1 Score: 140.6 bits (353), Expect = 5.4e-30
Identity = 70/78 (89.74%), Postives = 75/78 (96.15%), Query Frame = 1


Query: 1  MDIEQKQTEFIDQFVKQASSLKGSALASVVTEATSHPSLFAFSEVLAVPNVI-LEGTEHS 60
          MDIEQKQTEFID FVKQASSLKGSAL SVVT+ATSHPSLFAFSE+LAVP+V+ LEGTEHS
Sbjct: 1  MDIEQKQTEFIDHFVKQASSLKGSALGSVVTDATSHPSLFAFSEILAVPSVVELEGTEHS 60

Query: 61 VYLDVLRLFAYGTWSDYK 78
          +YLDVLRLFAYGTWSDYK
Sbjct: 61 IYLDVLRLFAYGTWSDYK 78

HSP 2 Score: 279.6 bits (714), Expect = 7.4e-72
Identity = 141/148 (95.27%), Postives = 145/148 (97.97%), Query Frame = 1


Query: 209 KGNSSRLPELGTDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 268
           K NSSRLPEL +DQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY
Sbjct: 78  KSNSSRLPELSSDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 137

Query: 269 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADN 328
           AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLG+MIRTLSNWLTTSDNLLVSIQEKIKWADN
Sbjct: 138 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIRTLSNWLTTSDNLLVSIQEKIKWADN 197

Query: 329 MSELDKKHRKDVEDRVEEVKKSLSLKVS 357
           MSELDKKHRKDV+DRVEEVKKSLSLK +
Sbjct: 198 MSELDKKHRKDVDDRVEEVKKSLSLKAN 225

[Close]

BLAST of Cla006712 vs. NCBI nr
Match: gi|449445513|ref|XP_004140517.1| (PREDICTED: COP9 signalosome complex subunit 7 isoform X1 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 1.4e-30
Identity = 71/78 (91.03%), Postives = 75/78 (96.15%), Query Frame = 1


Query: 1  MDIEQKQTEFIDQFVKQASSLKGSALASVVTEATSHPSLFAFSEVLAVPNVI-LEGTEHS 60
          MDIEQKQTEFID FVKQASSLKGSAL SVVT+ATSHPSLFAFSE+LAVPNV+ LEGTEHS
Sbjct: 1  MDIEQKQTEFIDHFVKQASSLKGSALGSVVTDATSHPSLFAFSEILAVPNVVELEGTEHS 60

Query: 61 VYLDVLRLFAYGTWSDYK 78
          +YLDVLRLFAYGTWSDYK
Sbjct: 61 IYLDVLRLFAYGTWSDYK 78

HSP 2 Score: 279.6 bits (714), Expect = 7.4e-72
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 1


Query: 209 KGNSSRLPELGTDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 268
           K NSSRLPEL +DQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY
Sbjct: 78  KSNSSRLPELSSDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 137

Query: 269 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADN 328
           AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLG+MIRTLSNWLTTSDNLLVSIQEKIKWADN
Sbjct: 138 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIRTLSNWLTTSDNLLVSIQEKIKWADN 197

Query: 329 MSELDKKHRKDVEDRVEEVKKSLSLKV 356
           MSELDKKHRKDV+DRVEEVKKSLSLK+
Sbjct: 198 MSELDKKHRKDVDDRVEEVKKSLSLKL 224

[Close]

BLAST of Cla006712 vs. NCBI nr
Match: gi|778712051|ref|XP_011656840.1| (PREDICTED: COP9 signalosome complex subunit 7 isoform X3 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 1.4e-30
Identity = 71/78 (91.03%), Postives = 75/78 (96.15%), Query Frame = 1


Query: 1  MDIEQKQTEFIDQFVKQASSLKGSALASVVTEATSHPSLFAFSEVLAVPNVI-LEGTEHS 60
          MDIEQKQTEFID FVKQASSLKGSAL SVVT+ATSHPSLFAFSE+LAVPNV+ LEGTEHS
Sbjct: 1  MDIEQKQTEFIDHFVKQASSLKGSALGSVVTDATSHPSLFAFSEILAVPNVVELEGTEHS 60

Query: 61 VYLDVLRLFAYGTWSDYK 78
          +YLDVLRLFAYGTWSDYK
Sbjct: 61 IYLDVLRLFAYGTWSDYK 78

HSP 2 Score: 279.6 bits (714), Expect = 7.4e-72
Identity = 141/148 (95.27%), Postives = 145/148 (97.97%), Query Frame = 1


Query: 209 KGNSSRLPELGTDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 268
           K NSSRLPEL +DQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY
Sbjct: 78  KSNSSRLPELSSDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 137

Query: 269 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADN 328
           AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLG+MIRTLSNWLTTSDNLLVSIQEKIKWADN
Sbjct: 138 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIRTLSNWLTTSDNLLVSIQEKIKWADN 197

Query: 329 MSELDKKHRKDVEDRVEEVKKSLSLKVS 357
           MSELDKKHRKDV+DRVEEVKKSLSLK +
Sbjct: 198 MSELDKKHRKDVDDRVEEVKKSLSLKAN 225

[Close]

BLAST of Cla006712 vs. NCBI nr
Match: gi|659119660|ref|XP_008459775.1| (PREDICTED: COP9 signalosome complex subunit 7 isoform X1 [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 5.4e-30
Identity = 70/78 (89.74%), Postives = 75/78 (96.15%), Query Frame = 1


Query: 1  MDIEQKQTEFIDQFVKQASSLKGSALASVVTEATSHPSLFAFSEVLAVPNVI-LEGTEHS 60
          MDIEQKQTEFID FVKQASSLKGSAL SVVT+ATSHPSLFAFSE+LAVP+V+ LEGTEHS
Sbjct: 1  MDIEQKQTEFIDHFVKQASSLKGSALGSVVTDATSHPSLFAFSEILAVPSVVELEGTEHS 60

Query: 61 VYLDVLRLFAYGTWSDYK 78
          +YLDVLRLFAYGTWSDYK
Sbjct: 61 IYLDVLRLFAYGTWSDYK 78

HSP 2 Score: 279.6 bits (714), Expect = 7.4e-72
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 1


Query: 209 KGNSSRLPELGTDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 268
           K NSSRLPEL +DQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY
Sbjct: 78  KSNSSRLPELSSDQALKLKQLTVLTLAETNKVLAYDQLMQELDVTNVRELEDFLINECMY 137

Query: 269 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGSMIRTLSNWLTTSDNLLVSIQEKIKWADN 328
           AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLG+MIRTLSNWLTTSDNLLVSIQEKIKWADN
Sbjct: 138 AGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIRTLSNWLTTSDNLLVSIQEKIKWADN 197

Query: 329 MSELDKKHRKDVEDRVEEVKKSLSLKV 356
           MSELDKKHRKDV+DRVEEVKKSLSLK+
Sbjct: 198 MSELDKKHRKDVDDRVEEVKKSLSLKL 224

The following BLAST results are available for this feature:

BLAST of Cla006712 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSN7_ARATH	8.2e-63	81.51	COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7 PE=1 SV=1	[more]
CSN7_DICDI	2.2e-23	34.76	COP9 signalosome complex subunit 7 OS=Dictyostelium discoideum GN=csn7 PE=1 SV=1	[more]
CSN7B_BOVIN	5.4e-22	36.99	COP9 signalosome complex subunit 7b OS=Bos taurus GN=COPS7B PE=2 SV=1	[more]
CSN7B_HUMAN	5.4e-22	36.99	COP9 signalosome complex subunit 7b OS=Homo sapiens GN=COPS7B PE=1 SV=1	[more]
CSN7B_MOUSE	2.0e-21	36.30	COP9 signalosome complex subunit 7b OS=Mus musculus GN=Cops7b PE=1 SV=1	[more]

BLAST of Cla006712 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GCN7_CUCME	8.0e-73	96.62	Cop9 complex subunit 7a OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
E5GCN7_CUCME	3.7e-30	89.74	Cop9 complex subunit 7a OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0KFL2_CUCSA	9.8e-31	91.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G104090 PE=4 SV=1	[more]
A0A061E2E9_THECC	2.6e-23	75.64	Proteasome component (PCI) domain protein isoform 2 OS=Theobroma cacao GN=TCM_00...	[more]
A0A061DUI6_THECC	2.6e-23	75.64	Proteasome component (PCI) domain protein isoform 3 OS=Theobroma cacao GN=TCM_00...	[more]

BLAST of Cla006712 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|307136429\|gb\|ADN34236.1\|	1.1e-72	96.62	cop9 complex subunit 7a [Cucumis melo subsp. melo]	[more]
gi\|307136429\|gb\|ADN34236.1\|	5.4e-30	89.74	cop9 complex subunit 7a [Cucumis melo subsp. melo]	[more]
gi\|449445513\|ref\|XP_004140517.1\|	1.4e-30	91.03	PREDICTED: COP9 signalosome complex subunit 7 isoform X1 [Cucumis sativus]	[more]
gi\|778712051\|ref\|XP_011656840.1\|	1.4e-30	91.03	PREDICTED: COP9 signalosome complex subunit 7 isoform X3 [Cucumis sativus]	[more]
gi\|659119660\|ref\|XP_008459775.1\|	5.4e-30	89.74	PREDICTED: COP9 signalosome complex subunit 7 isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000717	PCI_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010387	COP9 signalosome assembly
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0010017	red or far-red light signaling pathway
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0008150	biological_process
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0016571	histone methylation
cellular_component	GO:0008180	COP9 signalosome
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0000502	proteasome complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU16575	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU34860	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU36310	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU61934	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla006712	Cla006712.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU34860	WMU34860	transcribed_cluster
WMU36310	WMU36310	transcribed_cluster
WMU16575	WMU16575	transcribed_cluster
WMU61934	WMU61934	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 217..308 score: 1.4
None	No IPR available	PANTHER	PTHR15350	COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17	coord: 211..351 score: 2.2
None	No IPR available	SMART	SM00753	PINT	coord: 217..308 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla006712	Cla97C06G111920	Watermelon (97103) v2	wmwmbB408
Cla006712	Csa6G104090	Cucumber (Chinese Long) v2	cuwmB542
Cla006712	MELO3C022274	Melon (DHL92) v3.5.1	mewmB137
Cla006712	ClCG06G002540	Watermelon (Charleston Gray)	wcgwmB346
Cla006712	CSPI06G08200	Wild cucumber (PI 183967)	cpiwmB561
Cla006712	Cucsa.121160	Cucumber (Gy14) v1	cgywmB191
Cla006712	CmaCh17G005180	Cucurbita maxima (Rimu)	cmawmB351
Cla006712	CmaCh08G001430	Cucurbita maxima (Rimu)	cmawmB876
Cla006712	CmoCh17G004900	Cucurbita moschata (Rifu)	cmowmB346
Cla006712	CmoCh08G001440	Cucurbita moschata (Rifu)	cmowmB864
Cla006712	Lsi09G016800	Bottle gourd (USVL1VR-Ls)	lsiwmB036
Cla006712	Cp4.1LG12g04460	Cucurbita pepo (Zucchini)	cpewmB155
Cla006712	CsGy6G008280	Cucumber (Gy14) v2	cgybwmB505
Cla006712	MELO3C022274.2	Melon (DHL92) v3.6.1	medwmB134
Cla006712	Carg04970	Silver-seed gourd	carwmB0082
Cla006712	Carg26733	Silver-seed gourd	carwmB0132
Cla006712	CsaV3_6G008580	Cucumber (Chinese Long) v3	cucwmB567
Cla006712	Bhi12G001975	Wax gourd	wgowmB093

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla006712	Cucumber (Chinese Long) v3	cucwmB570
Cla006712	Cucumber (Gy14) v1	cgywmB190
Cla006712	Cucumber (Gy14) v1	cgywmB627
Cla006712	Cucumber (Chinese Long) v2	cuwmB544
Cla006712	Cucurbita pepo (Zucchini)	cpewmB337
Cla006712	Cucumber (Gy14) v2	cgybwmB509