Cla006612 (gene) Watermelon (97103) v1

NameCla006612
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr11 : 2069252 .. 2070214 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGCTCTTCTCGCACTCGCAGTGTCGCTCTCCTCTCAGTCTCGCTCTCCTTTCGATCTCGCTCTCTTCTCAGTCTCCGGTCCGAAAGCCGTCACCAGTCGCAGTCAGCCTCTCGCTCTCCTCTCGGTCTCGCTCTCCTCTCGATCTACCTCTCCTCTCGGTCTTCGATCCGACAGCAGTTGCCAGTCAGCCTTATTGCCTTAAATCAAGCCATTCGTCTGCCATCGTGACCACTCTGCTGGTTCGTCTTTGTTCATAATTTGGTCGTTCGTTTATATATATATTTAGTTTCATTTCATTTCAGCTTCGTAATTTTTTTTCTTCTACTGTTCTTCACTTAATTTTTTTTTTGTTTTTTTTTTATAAATTATAGATCTCTTGCCTCTTGGAACAGTAGGTTCTTCCAGCAGTGGCCGATTTCGAGGTTTGTAATTTTGTTCTCCCTATTGCCAAATTCACTTCTGGGTTGTGGTTGTTTGTTAATGTAAATATATATTTTTTAGTATTTGTTTTTTGTTTTGGATGTTCTATAAAATAGATTTTATGTTAGGTTGATGGTTGTTCTGTTTTTAATTTTTAAATTACAGATGTCTTGCCTCTTGGAACAGTAGGTTCTTCCAGCAGTGGCCGATTTCGAGGTTTGTAATTTTGTTCTCCCTGTAGCCAAATTCACTTCTGGGTTGTGGTTGTTTGTTAATGTAAATATATATTTTTTAGTATTTGTTTTTTGTTTTGGATGTTCTATAAAATAGATTTTATGTTAGTTTTGACTCTAGTTTTTCTATTTTTATAGATTATGGAGAGCAGTGGAAATCTTAGTCAAACTAGTCCTAGTCATAGTCCTAGTATTGCTCCCCTCGATCATGTCGTTGCTAATACTGTTGGAATTGGTAGTTCAAGTAAACCACCATTACATTCTAAGAAGAGATTTAGATCTACTAAGACAACCTCCACTGTATGA

mRNA sequence

ATGTCGCTCTTCTCGCACTCGCAGTGTCGCTCTCCTCTCAGTCTCGCTCTCCTTTCGATCTCGCTCTCTTCTCAGTCTCCGGTCCGAAAGCCGTCACCAGTCGCAGTCAGCCTCTCGCTCTCCTCTCGGTCTCGCTCTCCTCTCGATCTACCTCTCCTCTCGGTCTTCGATCCGACAGCAGTTGCCAGTCAGCCTTATTGCCTTAAATCAAGCCATTCGTCTGCCATCGTGACCACTCTGCTGGTTCTTCCAGCAGTGGCCGATTTCGAGGTTTGTAATTTTGTTCTCCCTGTAGCCAAATTCACTTCTGGGTTGTGGTTGTTTGTTAATATTATGGAGAGCAGTGGAAATCTTAGTCAAACTAGTCCTAGTCATAGTCCTAGTATTGCTCCCCTCGATCATGTCGTTGCTAATACTGTTGGAATTGGTAGTTCAAGTAAACCACCATTACATTCTAAGAAGAGATTTAGATCTACTAAGACAACCTCCACTGTATGA

Coding sequence (CDS)

ATGTCGCTCTTCTCGCACTCGCAGTGTCGCTCTCCTCTCAGTCTCGCTCTCCTTTCGATCTCGCTCTCTTCTCAGTCTCCGGTCCGAAAGCCGTCACCAGTCGCAGTCAGCCTCTCGCTCTCCTCTCGGTCTCGCTCTCCTCTCGATCTACCTCTCCTCTCGGTCTTCGATCCGACAGCAGTTGCCAGTCAGCCTTATTGCCTTAAATCAAGCCATTCGTCTGCCATCGTGACCACTCTGCTGGTTCTTCCAGCAGTGGCCGATTTCGAGGTTTGTAATTTTGTTCTCCCTGTAGCCAAATTCACTTCTGGGTTGTGGTTGTTTGTTAATATTATGGAGAGCAGTGGAAATCTTAGTCAAACTAGTCCTAGTCATAGTCCTAGTATTGCTCCCCTCGATCATGTCGTTGCTAATACTGTTGGAATTGGTAGTTCAAGTAAACCACCATTACATTCTAAGAAGAGATTTAGATCTACTAAGACAACCTCCACTGTATGA

Protein sequence

MSLFSHSQCRSPLSLALLSISLSSQSPVRKPSPVAVSLSLSSRSRSPLDLPLLSVFDPTAVASQPYCLKSSHSSAIVTTLLVLPAVADFEVCNFVLPVAKFTSGLWLFVNIMESSGNLSQTSPSHSPSIAPLDHVVANTVGIGSSSKPPLHSKKRFRSTKTTSTV
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla006612Cla006612.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla006612ClCG11G005920Watermelon (Charleston Gray)wcgwmB108
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla006612Cucumber (Chinese Long) v3cucwmB369
Cla006612Cucumber (Chinese Long) v3cucwmB558
Cla006612Watermelon (97103) v2wmwmbB362
Cla006612Watermelon (97103) v2wmwmbB371
Cla006612Wax gourdwgowmB347
Cla006612Watermelon (97103) v1wmwmB096
Cla006612Watermelon (97103) v1wmwmB155
Cla006612Cucurbita maxima (Rimu)cmawmB283
Cla006612Cucurbita maxima (Rimu)cmawmB648
Cla006612Cucurbita maxima (Rimu)cmawmB737
Cla006612Cucurbita maxima (Rimu)cmawmB740
Cla006612Cucurbita maxima (Rimu)cmawmB742
Cla006612Cucurbita moschata (Rifu)cmowmB274
Cla006612Cucurbita moschata (Rifu)cmowmB642
Cla006612Cucurbita moschata (Rifu)cmowmB731
Cla006612Cucurbita moschata (Rifu)cmowmB734
Cla006612Wild cucumber (PI 183967)cpiwmB358
Cla006612Wild cucumber (PI 183967)cpiwmB552
Cla006612Melon (DHL92) v3.5.1mewmB334
Cla006612Melon (DHL92) v3.5.1mewmB600
Cla006612Watermelon (Charleston Gray)wcgwmB266
Cla006612Cucumber (Chinese Long) v2cuwmB351
Cla006612Cucumber (Chinese Long) v2cuwmB533
Cla006612Cucurbita pepo (Zucchini)cpewmB095
Cla006612Cucurbita pepo (Zucchini)cpewmB196
Cla006612Cucurbita pepo (Zucchini)cpewmB461
Cla006612Cucurbita pepo (Zucchini)cpewmB464
Cla006612Bottle gourd (USVL1VR-Ls)lsiwmB165
Cla006612Bottle gourd (USVL1VR-Ls)lsiwmB277
Cla006612Cucumber (Gy14) v2cgybwmB328
Cla006612Cucumber (Gy14) v2cgybwmB497
Cla006612Melon (DHL92) v3.6.1medwmB331
Cla006612Silver-seed gourdcarwmB0024
Cla006612Silver-seed gourdcarwmB0261
Cla006612Silver-seed gourdcarwmB0673