Cla006561 (gene) Watermelon (97103) v1

NameCla006561
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionOs03g0331900 protein (Fragment) (AHRD V1 ***- Q0DS61_ORYSJ); contains Interpro domain(s) IPR013880 Yos1-like
LocationChr11 : 1341260 .. 1341493 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTGTGGACACTACTAGAGGGTTGTCTGCTTCTTGCTAACGCGCTGGCAATTCTGAATGAAGATCGCTTTCTTGCTCCTCGAGGATTGAACTTCTCTGAATTCTCAGGAGGCAGAACAAAGTCCTTCAAGGGGCAGCTTATTGGCCTTATCTACGCAACACAATATTTAAGAGTTCCTCTCATAATGCTAAATGCAATCTGTATCTTTGTAAAGTTAGTATCTGGATGA

mRNA sequence

ATGGGTCTGTGGACACTACTAGAGGGTTGTCTGCTTCTTGCTAACGCGCTGGCAATTCTGAATGAAGATCGCTTTCTTGCTCCTCGAGGATTGAACTTCTCTGAATTCTCAGGAGGCAGAACAAAGTCCTTCAAGGGGCAGCTTATTGGCCTTATCTACGCAACACAATATTTAAGAGTTCCTCTCATAATGCTAAATGCAATCTGTATCTTTGTAAAGTTAGTATCTGGATGA

Coding sequence (CDS)

ATGGGTCTGTGGACACTACTAGAGGGTTGTCTGCTTCTTGCTAACGCGCTGGCAATTCTGAATGAAGATCGCTTTCTTGCTCCTCGAGGATTGAACTTCTCTGAATTCTCAGGAGGCAGAACAAAGTCCTTCAAGGGGCAGCTTATTGGCCTTATCTACGCAACACAATATTTAAGAGTTCCTCTCATAATGCTAAATGCAATCTGTATCTTTGTAAAGTTAGTATCTGGATGA

Protein sequence

MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRVPLIMLNAICIFVKLVSG
BLAST of Cla006561 vs. Swiss-Prot
Match: IR3IP_XENLA (Immediate early response 3-interacting protein 1 OS=Xenopus laevis GN=ier3ip1 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.4e-06
Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 1

Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSG--GRTKSFKGQLIGLIYATQ-YLR 62
          L+TLL+  LL  NA+A+L+E+RFL+  G       G  G     K QL+ LI + +  +R
Sbjct: 5  LYTLLQAALLCVNAVAVLHEERFLSKIGWGVDHGIGGFGEEPGMKSQLMNLIRSVRTVMR 64

Query: 63 VPLIMLNAICIFVKLVSG 78
          VPLI++N++ I + L+ G
Sbjct: 65 VPLIIVNSVTIVLLLLFG 82

BLAST of Cla006561 vs. Swiss-Prot
Match: IR3IP_DANRE (Immediate early response 3-interacting protein 1 OS=Danio rerio GN=ier3ip1 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 4.4e-06
Identity = 29/78 (37.18%), Postives = 46/78 (58.97%), Query Frame = 1

Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSG--GRTKSFKGQLIGLIYATQ-YLR 62
          L+ L++  +L  NA+A+L+E+RFL+  G    +  G  G     K QL+ LI + +  +R
Sbjct: 5  LYALIQTAILFTNAIAVLHEERFLSKIGWGAEQGVGGFGDDPGIKAQLLNLIRSVRTVMR 64

Query: 63 VPLIMLNAICIFVKLVSG 78
          VPLI +N++CI + L+ G
Sbjct: 65 VPLIAVNSVCIVLLLLFG 82

BLAST of Cla006561 vs. Swiss-Prot
Match: IR3IP_BOVIN (Immediate early response 3-interacting protein 1 OS=Bos taurus GN=IER3IP1 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.6e-06
Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 1

Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSG--GRTKSFKGQLIGLIYATQ-YLR 62
          L++LL+  LL  NA+A+L+E+RFL   G    +  G  G     K QL+ LI + +  +R
Sbjct: 5  LYSLLQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLMNLIRSVRTVMR 64

Query: 63 VPLIMLNAICIFVKLVSG 78
          VPLI++N+I I + L+ G
Sbjct: 65 VPLIIVNSIAIVLLLLFG 82

BLAST of Cla006561 vs. Swiss-Prot
Match: IR3IP_HUMAN (Immediate early response 3-interacting protein 1 OS=Homo sapiens GN=IER3IP1 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.6e-06
Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 1

Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSG--GRTKSFKGQLIGLIYATQ-YLR 62
          L++LL+  LL  NA+A+L+E+RFL   G    +  G  G     K QL+ LI + +  +R
Sbjct: 5  LYSLLQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLMNLIRSVRTVMR 64

Query: 63 VPLIMLNAICIFVKLVSG 78
          VPLI++N+I I + L+ G
Sbjct: 65 VPLIIVNSIAIVLLLLFG 82

BLAST of Cla006561 vs. TrEMBL
Match: A0A0A0KBI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G009360 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.1e-35
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVKLVSG 78
          PLIMLNAICIFVKLVSG
Sbjct: 61 PLIMLNAICIFVKLVSG 77

BLAST of Cla006561 vs. TrEMBL
Match: D7TMI4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g03230 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 4.3e-32
Identity = 70/77 (90.91%), Postives = 75/77 (97.40%), Query Frame = 1

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLL+ANALAILNEDRFLAPRG +FSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 12 MGLWTLLEGCLLIANALAILNEDRFLAPRGWSFSEFSGGRTKSFKGQLIGLIYATQYLRV 71

Query: 61 PLIMLNAICIFVKLVSG 78
          PLI+LN+ICI +KLVSG
Sbjct: 72 PLILLNSICIIIKLVSG 88

BLAST of Cla006561 vs. TrEMBL
Match: A0A0D2V3B7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G074300 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 4.7e-31
Identity = 70/77 (90.91%), Postives = 74/77 (96.10%), Query Frame = 1

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWT+LEG LLLANALAILNEDRFLAPRG +FSEFS GRTKSFKGQLIGLIYATQY+RV
Sbjct: 1  MGLWTILEGFLLLANALAILNEDRFLAPRGWSFSEFSAGRTKSFKGQLIGLIYATQYMRV 60

Query: 61 PLIMLNAICIFVKLVSG 78
          PLI+LNAICIFVKLVSG
Sbjct: 61 PLILLNAICIFVKLVSG 77

BLAST of Cla006561 vs. TrEMBL
Match: A0A0B2Q8B8_GLYSO (Immediate early response 3-interacting protein 1 OS=Glycine soja GN=glysoja_017912 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 6.2e-31
Identity = 70/77 (90.91%), Postives = 73/77 (94.81%), Query Frame = 1

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEG LLLANALAILNEDRFLAPRG  F +FSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 10 MGLWTLLEGFLLLANALAILNEDRFLAPRGWGFQDFSGGRTKSFKGQLIGLIYATQYLRV 69

Query: 61 PLIMLNAICIFVKLVSG 78
          PLI+LN+ICIFVKLVSG
Sbjct: 70 PLILLNSICIFVKLVSG 86

BLAST of Cla006561 vs. TrEMBL
Match: A0A0B0P5F8_GOSAR (Immediate early response 3-interacting 1 OS=Gossypium arboreum GN=F383_09712 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 6.2e-31
Identity = 70/77 (90.91%), Postives = 74/77 (96.10%), Query Frame = 1

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEG LLLANALAILNEDRFLAPRG +FS+FS GRTKSFKGQLIGLIYATQY+RV
Sbjct: 1  MGLWTLLEGFLLLANALAILNEDRFLAPRGWSFSDFSAGRTKSFKGQLIGLIYATQYMRV 60

Query: 61 PLIMLNAICIFVKLVSG 78
          PLI+LNAICIFVKLVSG
Sbjct: 61 PLILLNAICIFVKLVSG 77

BLAST of Cla006561 vs. NCBI nr
Match: gi|778709405|ref|XP_011656396.1| (PREDICTED: immediate early response 3-interacting protein 1-like [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 5.9e-35
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVKLVSG 78
          PLIMLNAICIFVKLVSG
Sbjct: 61 PLIMLNAICIFVKLVSG 77

BLAST of Cla006561 vs. NCBI nr
Match: gi|659081594|ref|XP_008441413.1| (PREDICTED: immediate early response 3-interacting protein 1-like [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 7.8e-35
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 1

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVKLVSG 78
          PLIMLNAICIFVKL+SG
Sbjct: 61 PLIMLNAICIFVKLISG 77

BLAST of Cla006561 vs. NCBI nr
Match: gi|802547017|ref|XP_012088078.1| (PREDICTED: immediate early response 3-interacting protein 1-like [Jatropha curcas])

HSP 1 Score: 145.6 bits (366), Expect = 3.6e-32
Identity = 72/77 (93.51%), Postives = 75/77 (97.40%), Query Frame = 1

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRG +FSEFSGGRTKSFKGQLIGLIYATQY+RV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGWSFSEFSGGRTKSFKGQLIGLIYATQYMRV 60

Query: 61 PLIMLNAICIFVKLVSG 78
          PLI+LNAICI VKLVSG
Sbjct: 61 PLIILNAICIVVKLVSG 77

BLAST of Cla006561 vs. NCBI nr
Match: gi|296086110|emb|CBI31551.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 144.8 bits (364), Expect = 6.2e-32
Identity = 70/77 (90.91%), Postives = 75/77 (97.40%), Query Frame = 1

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLL+ANALAILNEDRFLAPRG +FSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 12 MGLWTLLEGCLLIANALAILNEDRFLAPRGWSFSEFSGGRTKSFKGQLIGLIYATQYLRV 71

Query: 61 PLIMLNAICIFVKLVSG 78
          PLI+LN+ICI +KLVSG
Sbjct: 72 PLILLNSICIIIKLVSG 88

BLAST of Cla006561 vs. NCBI nr
Match: gi|731412780|ref|XP_010658490.1| (PREDICTED: immediate early response 3-interacting protein 1-like [Vitis vinifera])

HSP 1 Score: 144.8 bits (364), Expect = 6.2e-32
Identity = 70/77 (90.91%), Postives = 75/77 (97.40%), Query Frame = 1

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLL+ANALAILNEDRFLAPRG +FSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLIANALAILNEDRFLAPRGWSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVKLVSG 78
          PLI+LN+ICI +KLVSG
Sbjct: 61 PLILLNSICIIIKLVSG 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
IR3IP_XENLA3.4e-0639.74Immediate early response 3-interacting protein 1 OS=Xenopus laevis GN=ier3ip1 PE... [more]
IR3IP_DANRE4.4e-0637.18Immediate early response 3-interacting protein 1 OS=Danio rerio GN=ier3ip1 PE=3 ... [more]
IR3IP_BOVIN7.6e-0639.74Immediate early response 3-interacting protein 1 OS=Bos taurus GN=IER3IP1 PE=3 S... [more]
IR3IP_HUMAN7.6e-0639.74Immediate early response 3-interacting protein 1 OS=Homo sapiens GN=IER3IP1 PE=1... [more]
Match NameE-valueIdentityDescription
A0A0A0KBI3_CUCSA4.1e-35100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G009360 PE=4 SV=1[more]
D7TMI4_VITVI4.3e-3290.91Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g03230 PE=4 SV=... [more]
A0A0D2V3B7_GOSRA4.7e-3190.91Uncharacterized protein OS=Gossypium raimondii GN=B456_012G074300 PE=4 SV=1[more]
A0A0B2Q8B8_GLYSO6.2e-3190.91Immediate early response 3-interacting protein 1 OS=Glycine soja GN=glysoja_0179... [more]
A0A0B0P5F8_GOSAR6.2e-3190.91Immediate early response 3-interacting 1 OS=Gossypium arboreum GN=F383_09712 PE=... [more]
Match NameE-valueIdentityDescription
gi|778709405|ref|XP_011656396.1|5.9e-35100.00PREDICTED: immediate early response 3-interacting protein 1-like [Cucumis sativu... [more]
gi|659081594|ref|XP_008441413.1|7.8e-3598.70PREDICTED: immediate early response 3-interacting protein 1-like [Cucumis melo][more]
gi|802547017|ref|XP_012088078.1|3.6e-3293.51PREDICTED: immediate early response 3-interacting protein 1-like [Jatropha curca... [more]
gi|296086110|emb|CBI31551.3|6.2e-3290.91unnamed protein product [Vitis vinifera][more]
gi|731412780|ref|XP_010658490.1|6.2e-3290.91PREDICTED: immediate early response 3-interacting protein 1-like [Vitis vinifera... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013880Yos1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU14377watermelon EST collection version 2.0transcribed_cluster
WMU30181watermelon unigene v2 vs TrEMBLtranscribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla006561Cla006561.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU30181WMU30181transcribed_cluster
WMU14377WMU14377transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013880Yos1-likePANTHERPTHR15858UNCHARACTERIZEDcoord: 1..77
score: 2.1
IPR013880Yos1-likePFAMPF08571Yos1coord: 3..77
score: 2.7
NoneNo IPR availablePANTHERPTHR15858:SF0IMMEDIATE EARLY RESPONSE 3-INTERACTING PROTEIN 1coord: 1..77
score: 2.1

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla006561Silver-seed gourdcarwmB0024
Cla006561Silver-seed gourdcarwmB0153
Cla006561Silver-seed gourdcarwmB0261
Cla006561Silver-seed gourdcarwmB0555
Cla006561Silver-seed gourdcarwmB0583
Cla006561Silver-seed gourdcarwmB0673
Cla006561Silver-seed gourdcarwmB1001
Cla006561Cucumber (Chinese Long) v3cucwmB084
Cla006561Cucumber (Chinese Long) v3cucwmB284
Cla006561Cucumber (Chinese Long) v3cucwmB369
Cla006561Cucumber (Chinese Long) v3cucwmB459
Cla006561Cucumber (Chinese Long) v3cucwmB558
Cla006561Watermelon (97103) v2wmwmbB357
Cla006561Watermelon (97103) v2wmwmbB362
Cla006561Watermelon (97103) v2wmwmbB380
Cla006561Wax gourdwgowmB054
Cla006561Wax gourdwgowmB347
Cla006561Watermelon (97103) v1wmwmB055
Cla006561Watermelon (97103) v1wmwmB096
Cla006561Watermelon (97103) v1wmwmB113
Cla006561Watermelon (97103) v1wmwmB155
Cla006561Cucumber (Gy14) v1cgywmB256
Cla006561Cucumber (Gy14) v1cgywmB312
Cla006561Cucumber (Gy14) v1cgywmB340
Cla006561Cucurbita maxima (Rimu)cmawmB249
Cla006561Cucurbita maxima (Rimu)cmawmB283
Cla006561Cucurbita maxima (Rimu)cmawmB648
Cla006561Cucurbita maxima (Rimu)cmawmB740
Cla006561Cucurbita maxima (Rimu)cmawmB742
Cla006561Cucurbita maxima (Rimu)cmawmB809
Cla006561Cucurbita maxima (Rimu)cmawmB846
Cla006561Cucurbita moschata (Rifu)cmowmB238
Cla006561Cucurbita moschata (Rifu)cmowmB274
Cla006561Cucurbita moschata (Rifu)cmowmB642
Cla006561Cucurbita moschata (Rifu)cmowmB734
Cla006561Cucurbita moschata (Rifu)cmowmB737
Cla006561Cucurbita moschata (Rifu)cmowmB800
Cla006561Cucurbita moschata (Rifu)cmowmB835
Cla006561Wild cucumber (PI 183967)cpiwmB276
Cla006561Wild cucumber (PI 183967)cpiwmB448
Cla006561Melon (DHL92) v3.5.1mewmB385
Cla006561Watermelon (Charleston Gray)wcgwmB080
Cla006561Watermelon (Charleston Gray)wcgwmB266
Cla006561Watermelon (Charleston Gray)wcgwmB392
Cla006561Cucumber (Chinese Long) v2cuwmB073
Cla006561Cucumber (Chinese Long) v2cuwmB275
Cla006561Cucurbita pepo (Zucchini)cpewmB196
Cla006561Cucurbita pepo (Zucchini)cpewmB461
Cla006561Cucurbita pepo (Zucchini)cpewmB464
Cla006561Cucurbita pepo (Zucchini)cpewmB467
Cla006561Cucurbita pepo (Zucchini)cpewmB621
Cla006561Cucurbita pepo (Zucchini)cpewmB852
Cla006561Bottle gourd (USVL1VR-Ls)lsiwmB165
Cla006561Bottle gourd (USVL1VR-Ls)lsiwmB276
Cla006561Bottle gourd (USVL1VR-Ls)lsiwmB277
Cla006561Bottle gourd (USVL1VR-Ls)lsiwmB338
Cla006561Cucumber (Gy14) v2cgybwmB257
Cla006561Cucumber (Gy14) v2cgybwmB407
Cla006561Cucumber (Gy14) v2cgybwmB497
Cla006561Melon (DHL92) v3.6.1medwmB176
Cla006561Melon (DHL92) v3.6.1medwmB325
Cla006561Melon (DHL92) v3.6.1medwmB379