Cla006364 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAGTGATGACATTAGCGAAGTCATATCAACCGAGGTTCCAGTGGCCAAAGGCTTCTGTAGGCCTGAGCAACGAATAGTTATGACAAAGAAGCTGAGCGAAGTGGATGCTTTCAGTGGCCGGGGAAATGATGAATCAATGACTCAAGTCAAGTATGAGGTGCCAAAGAACGAAGAGATGATAAGCACACAAGGAAAGAACTCAAAATCTCCCGTCTTACACTATGTCCCTCTATCTCGACGCAAGAAAGGAGAATCACCATTTGTAGAATGCTCCAAAAATCTAATGATCGGAGACGTCAAAATTTTGAAGGAGAGTTTCACTACGCCGCTTACAAAGATGGATAAGAGTGACATCAAAAACACTGAGACAGAGCAAGCTAGCGCAACTTTGCCAGAAAAACAAACAAATGATGGCTTCGATCCAAAGGCATATAGGCTACTGGCAAAGGCAGGTTATGATTTCAAGGCTCATACTGAGTTTAAAACTCTGAAAATATCTGATGAAAGACCGGAACTCTCCCCTACTCAAAGGAAGCTTCAGAAAGAAGGGTATACTATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAAGAAAGCAATGACTCTAAAGAAGACAAGGGAAGTGAAGGTCAGAGAATGTCTGCCTTTAGTCACATTACTTCTTCTGTAGCACGTCCTTCGGTTTTTCAAAGGCTGAGTATGCTTGGGGGTGAAAATAAAGAACAACCTTCAACTTCCGACCATACCCGACTTTCTGCGTTTCAGAGGTTAAGTGTAAACCCTCGGAAGATAAATAATGTGTGCTCAAATACCACCCCACAAGCATCTGCTTTCGAGAGATTAAGCGTCACCACAACAAGAAGTCAAAAATGA ATGAAAAGTGATGACATTAGCGAAGTCATATCAACCGAGGTTCCAGTGGCCAAAGGCTTCTGTAGGCCTGAGCAACGAATAGTTATGACAAAGAAGCTGAGCGAAGTGGATGCTTTCAGTGGCCGGGGAAATGATGAATCAATGACTCAAGTCAAGTATGAGGTGCCAAAGAACGAAGAGATGATAAGCACACAAGGAAAGAACTCAAAATCTCCCGTCTTACACTATGTCCCTCTATCTCGACGCAAGAAAGGAGAATCACCATTTGTAGAATGCTCCAAAAATCTAATGATCGGAGACGTCAAAATTTTGAAGGAGAGTTTCACTACGCCGCTTACAAAGATGGATAAGAGTGACATCAAAAACACTGAGACAGAGCAAGCTAGCGCAACTTTGCCAGAAAAACAAACAAATGATGGCTTCGATCCAAAGGCATATAGGCTACTGGCAAAGGCAGGTTATGATTTCAAGGCTCATACTGAGTTTAAAACTCTGAAAATATCTGATGAAAGACCGGAACTCTCCCCTACTCAAAGGAAGCTTCAGAAAGAAGGCAATGACTCTAAAGAAGACAAGGGAAGTGAAGGTCAGAGAATGTCTGCCTTTAGTCACATTACTTCTTCTGTAGCACGTCCTTCGGTTTTTCAAAGGCTGAGTATGCTTGGGGGTGAAAATAAAGAACAACCTTCAACTTCCGACCATACCCGACTTTCTGCGTTTCAGAGGTTAAGTGTAAACCCTCGGAAGATAAATAATGTGTGCTCAAATACCACCCCACAAGCATCTGCTTTCGAGAGATTAAGCGTCACCACAACAAGAAGTCAAAAATGA ATGAAAAGTGATGACATTAGCGAAGTCATATCAACCGAGGTTCCAGTGGCCAAAGGCTTCTGTAGGCCTGAGCAACGAATAGTTATGACAAAGAAGCTGAGCGAAGTGGATGCTTTCAGTGGCCGGGGAAATGATGAATCAATGACTCAAGTCAAGTATGAGGTGCCAAAGAACGAAGAGATGATAAGCACACAAGGAAAGAACTCAAAATCTCCCGTCTTACACTATGTCCCTCTATCTCGACGCAAGAAAGGAGAATCACCATTTGTAGAATGCTCCAAAAATCTAATGATCGGAGACGTCAAAATTTTGAAGGAGAGTTTCACTACGCCGCTTACAAAGATGGATAAGAGTGACATCAAAAACACTGAGACAGAGCAAGCTAGCGCAACTTTGCCAGAAAAACAAACAAATGATGGCTTCGATCCAAAGGCATATAGGCTACTGGCAAAGGCAGGTTATGATTTCAAGGCTCATACTGAGTTTAAAACTCTGAAAATATCTGATGAAAGACCGGAACTCTCCCCTACTCAAAGGAAGCTTCAGAAAGAAGGCAATGACTCTAAAGAAGACAAGGGAAGTGAAGGTCAGAGAATGTCTGCCTTTAGTCACATTACTTCTTCTGTAGCACGTCCTTCGGTTTTTCAAAGGCTGAGTATGCTTGGGGGTGAAAATAAAGAACAACCTTCAACTTCCGACCATACCCGACTTTCTGCGTTTCAGAGGTTAAGTGTAAACCCTCGGAAGATAAATAATGTGTGCTCAAATACCACCCCACAAGCATCTGCTTTCGAGAGATTAAGCGTCACCACAACAAGAAGTCAAAAATGA MKSDDISEVISTEVPVAKGFCRPEQRIVMTKKLSEVDAFSGRGNDESMTQVKYEVPKNEEMISTQGKNSKSPVLHYVPLSRRKKGESPFVECSKNLMIGDVKILKESFTTPLTKMDKSDIKNTETEQASATLPEKQTNDGFDPKAYRLLAKAGYDFKAHTEFKTLKISDERPELSPTQRKLQKEGNDSKEDKGSEGQRMSAFSHITSSVARPSVFQRLSMLGGENKEQPSTSDHTRLSAFQRLSVNPRKINNVCSNTTPQASAFERLSVTTTRSQK
BLAST of Cla006364 vs. TrEMBL
Match: B0F6T3_CUCSA (Gypsy-like retrotransposase OS=Cucumis sativus PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.1e-16 Identity = 52/96 (54.17%), Postives = 68/96 (70.83%), Query Frame = 1
BLAST of Cla006364 vs. TrEMBL
Match: A5C5C0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007094 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.1e-10 Identity = 61/212 (28.77%), Postives = 96/212 (45.28%), Query Frame = 1
BLAST of Cla006364 vs. TrEMBL
Match: A0A0J8CB77_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g111360 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.0e-07 Identity = 62/200 (31.00%), Postives = 92/200 (46.00%), Query Frame = 1
BLAST of Cla006364 vs. TrEMBL
Match: E4Z8P4_MALDO (Putative uncharacterized protein OS=Malus domestica PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.4e-07 Identity = 43/139 (30.94%), Postives = 70/139 (50.36%), Query Frame = 1
BLAST of Cla006364 vs. TrEMBL
Match: A0A0J8CH90_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g107940 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.5e-07 Identity = 58/194 (29.90%), Postives = 86/194 (44.33%), Query Frame = 1
BLAST of Cla006364 vs. NCBI nr
Match: gi|778697752|ref|XP_011654390.1| (PREDICTED: uncharacterized protein LOC105435379 [Cucumis sativus]) HSP 1 Score: 176.4 bits (446), Expect = 6.8e-41 Identity = 92/177 (51.98%), Postives = 119/177 (67.23%), Query Frame = 1
BLAST of Cla006364 vs. NCBI nr
Match: gi|778660504|ref|XP_011656345.1| (PREDICTED: uncharacterized protein LOC105435721 isoform X1 [Cucumis sativus]) HSP 1 Score: 173.3 bits (438), Expect = 5.8e-40 Identity = 105/275 (38.18%), Postives = 151/275 (54.91%), Query Frame = 1
BLAST of Cla006364 vs. NCBI nr
Match: gi|778660504|ref|XP_011656345.1| (PREDICTED: uncharacterized protein LOC105435721 isoform X1 [Cucumis sativus]) HSP 1 Score: 65.1 bits (157), Expect = 2.2e-07 Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 1
HSP 2 Score: 146.7 bits (369), Expect = 5.8e-32 Identity = 69/138 (50.00%), Postives = 99/138 (71.74%), Query Frame = 1
BLAST of Cla006364 vs. NCBI nr
Match: gi|659113191|ref|XP_008456446.1| (PREDICTED: uncharacterized protein LOC103496389 [Cucumis melo]) HSP 1 Score: 142.9 bits (359), Expect = 8.4e-31 Identity = 72/127 (56.69%), Postives = 91/127 (71.65%), Query Frame = 1
BLAST of Cla006364 vs. NCBI nr
Match: gi|659074577|ref|XP_008437679.1| (PREDICTED: uncharacterized protein LOC103483019 [Cucumis melo]) HSP 1 Score: 128.6 bits (322), Expect = 1.6e-26 Identity = 61/120 (50.83%), Postives = 87/120 (72.50%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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