Cla006023 (gene) Watermelon (97103) v1

Overview
NameCla006023
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr7 : 2393263 .. 2393910 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCGACAGGTCTTGCAGGAGCCACGGTGTGGGATAACACCTGGAGTGAAGAGCAAAGCTTTGAGTCCGAGTCAAGAGTATGTTGTATTTAGCAAAGTCAAGCATAAGGGTAAGTTATAAAAGTATGAGGATGGGTTGACTTTGTGGTAGTCTTCAACAACCCAAAATTTGTTGACAGTGGTTAATGGAGGTGTAGTATAAATAAGGCTTACTTGTTTAGCATCTAATTTACACACAAAGACTCGTGTGAGTAAATTTGATAGAGTAAGAGAAACACGTGGGGATTGATCTCCTTGGACAATTCGTGCGGTTGTGTTTCTTATAGCAAGGTTGTCTCGTGTGCATTGCCTTGCGCCTCTGTGCGTGCTTGCTCGCTCGCGCCCACTAGCCTATGTGGGCACTTTCCTACATCCTCGCGCGTGCATGCTCGCCCTGTGTGTGTCATGTTTGATTGGGCGTGTGCCACCCAGTGATTGCACCATGACCATCTACCAGTGTCCAACTCCTGCAACGGCATGTCGACCCACAACCGCTCGTGTCCATGCGTTCTGCTGTGCGGCCTATCGACCATGGTTGTGTGCCAAGTTGTGCTGCCAGATGTGTCACCCATATGGGAATGGGTTGCCTTCATCGACAATCCCATAA

mRNA sequence

ATGGCCCGACAGGTCTTGCAGGAGCCACGGTGTGGGATAACACCTGGAGTGAAGAGCAAAGCTTTGAGTCCGAGTCAAGAGTATGTTGTATTTAGCAAAGTCAAGCATAAGGCAAGGTTGTCTCGTGTGCATTGCCTTGCGCCTCTGTGCGTGCTTGCTCGCTCGCGCCCACTAGCCTATGTGGGCACTTTCCTACATCCTCGCGCGTGCATGCTCGCCCTGTGTGTGTCATGTTTGATTGGGCGTGTGCCACCCAGTGATTGCACCATGACCATCTACCAGTGTCCAACTCCTGCAACGGCATGTCGACCCACAACCGCTCGTGTCCATGCGTTCTGCTGTGCGGCCTATCGACCATGGTTGTGTGCCAAGTTGTGCTGCCAGATGTGTCACCCATATGGGAATGGGTTGCCTTCATCGACAATCCCATAA

Coding sequence (CDS)

ATGGCCCGACAGGTCTTGCAGGAGCCACGGTGTGGGATAACACCTGGAGTGAAGAGCAAAGCTTTGAGTCCGAGTCAAGAGTATGTTGTATTTAGCAAAGTCAAGCATAAGGCAAGGTTGTCTCGTGTGCATTGCCTTGCGCCTCTGTGCGTGCTTGCTCGCTCGCGCCCACTAGCCTATGTGGGCACTTTCCTACATCCTCGCGCGTGCATGCTCGCCCTGTGTGTGTCATGTTTGATTGGGCGTGTGCCACCCAGTGATTGCACCATGACCATCTACCAGTGTCCAACTCCTGCAACGGCATGTCGACCCACAACCGCTCGTGTCCATGCGTTCTGCTGTGCGGCCTATCGACCATGGTTGTGTGCCAAGTTGTGCTGCCAGATGTGTCACCCATATGGGAATGGGTTGCCTTCATCGACAATCCCATAA

Protein sequence

MARQVLQEPRCGITPGVKSKALSPSQEYVVFSKVKHKARLSRVHCLAPLCVLARSRPLAYVGTFLHPRACMLALCVSCLIGRVPPSDCTMTIYQCPTPATACRPTTARVHAFCCAAYRPWLCAKLCCQMCHPYGNGLPSSTIP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU75807watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla006023Cla006023.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU75807WMU75807transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla006023ClCG07G000580Watermelon (Charleston Gray)wcgwmB373
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla006023Bottle gourd (USVL1VR-Ls)lsiwmB190
Cla006023Bottle gourd (USVL1VR-Ls)lsiwmB013
Cla006023Bottle gourd (USVL1VR-Ls)lsiwmB356
Cla006023Bottle gourd (USVL1VR-Ls)lsiwmB359
Cla006023Cucumber (Gy14) v2cgybwmB113
Cla006023Cucumber (Gy14) v2cgybwmB114
Cla006023Cucumber (Gy14) v2cgybwmB207
Cla006023Melon (DHL92) v3.6.1medwmB223
Cla006023Melon (DHL92) v3.6.1medwmB397
Cla006023Melon (DHL92) v3.6.1medwmB399
Cla006023Melon (DHL92) v3.6.1medwmB444
Cla006023Silver-seed gourdcarwmB0109
Cla006023Silver-seed gourdcarwmB0217
Cla006023Silver-seed gourdcarwmB0778
Cla006023Cucumber (Chinese Long) v3cucwmB130
Cla006023Cucumber (Chinese Long) v3cucwmB131
Cla006023Cucumber (Chinese Long) v3cucwmB227
Cla006023Cucumber (Chinese Long) v3cucwmB613
Cla006023Watermelon (97103) v2wmwmbB161
Cla006023Watermelon (97103) v2wmwmbB165
Cla006023Watermelon (97103) v2wmwmbB186
Cla006023Watermelon (97103) v2wmwmbB175
Cla006023Wax gourdwgowmB265
Cla006023Wax gourdwgowmB613
Cla006023Watermelon (97103) v1wmwmB017
Cla006023Watermelon (97103) v1wmwmB099
Cla006023Watermelon (97103) v1wmwmB116
Cla006023Cucumber (Gy14) v1cgywmB319
Cla006023Cucumber (Gy14) v1cgywmB441
Cla006023Cucumber (Gy14) v1cgywmB475
Cla006023Cucumber (Gy14) v1cgywmB699
Cla006023Cucurbita maxima (Rimu)cmawmB236
Cla006023Cucurbita maxima (Rimu)cmawmB341
Cla006023Cucurbita maxima (Rimu)cmawmB343
Cla006023Cucurbita maxima (Rimu)cmawmB558
Cla006023Cucurbita maxima (Rimu)cmawmB866
Cla006023Cucurbita maxima (Rimu)cmawmB867
Cla006023Cucurbita moschata (Rifu)cmowmB223
Cla006023Cucurbita moschata (Rifu)cmowmB336
Cla006023Cucurbita moschata (Rifu)cmowmB339
Cla006023Cucurbita moschata (Rifu)cmowmB551
Cla006023Cucurbita moschata (Rifu)cmowmB853
Cla006023Cucurbita moschata (Rifu)cmowmB854
Cla006023Melon (DHL92) v3.5.1mewmB228
Cla006023Melon (DHL92) v3.5.1mewmB405
Cla006023Melon (DHL92) v3.5.1mewmB407
Cla006023Melon (DHL92) v3.5.1mewmB459
Cla006023Watermelon (Charleston Gray)wcgwmB028
Cla006023Watermelon (Charleston Gray)wcgwmB281
Cla006023Watermelon (Charleston Gray)wcgwmB324
Cla006023Cucumber (Chinese Long) v2cuwmB116
Cla006023Cucumber (Chinese Long) v2cuwmB117
Cla006023Cucumber (Chinese Long) v2cuwmB221
Cla006023Cucurbita pepo (Zucchini)cpewmB146
Cla006023Cucurbita pepo (Zucchini)cpewmB326
Cla006023Cucurbita pepo (Zucchini)cpewmB328
Cla006023Cucurbita pepo (Zucchini)cpewmB605
Cla006023Cucurbita pepo (Zucchini)cpewmB700
Cla006023Cucurbita pepo (Zucchini)cpewmB841