Cla005999 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTTGTAATCCCCATGTGTACGGTCTCTGCAATTTCACCCCAATTTCCCTTGGCCCTCACTTGTATGTAATCGGCGGCTCTCTCTTCGACACTCGTTCTTATCCAATCGACCGTCCTTCTTCTTCCTCCTCTGCTTTCCGATTCGATTTCCATTCCTCCTTGTGGGAACCCATCTCGCCGATGTTGTCGCCGCGGGGGAGCTTTGCGTGCGCTGCGGTTCCTGATTCCGGACAGATTTTGGTGGCTGGAGGTGGGTCTAGGCACACGATGTTTGCGGCAGCCGGGAGTCGAATGAGCTCCGTTGAAAGGTATGACGGTTTAACTCGAAAGTTTAAGCTGATGGGTTAGTGTAAATTTGATCGGATATGGATATGGCTTTAACAGGTATGATGTGGAGAGAGATGAGTGGGTTGCACTTGATGGGTTGCCGAGGTTTCGAGCTGGGTGTGTTGGGTTCTTTGTGGGAAATGGTGAGAAGAGAGAGTTTTGGGTGATGGGTGGCTATGGTGAATCAAGGACTATTTCAGGAGTGTTTCCTGTGGATGAATATTATAGGGATGCTGTTGTGATGGAGCTGAGGAATGGCCATGGCAGTGGGAGGTGGAGACAAATTGGGGATATGTGGGAAGAGGGGGAAAGGAGGAGGCTAGGAAAAATTGTGGTGATTGAGAATTATATCCATGGACAACCTGGAATTTTCATGCTTGATGGTGATGAATTCTTAAGGTTACTCTTCATCTTTCTAGTTGGTTATGTGTTGTTTAAGATTCCTATTATAGTTGAGAATGATTTCAGTTTTCTTCATGGTTTACTATAGCAAATAGCTTTCTGATCTTAATGTTTAGGTGGAAAATTTTTCATGGGCTGTTTAAGTGTTTGCTTTGGTTTTGCGACTGATTACTTTTCTTATGATTGACTCTGGAAATTCCTTTTATCACTCTGTTCTTTGTTCTTTATTTCCTTTTTTTTCCCATTTAGAGAGTAAAAAGTAGAAGTGTGAATTGCACACATCCATTCACTATTGACAAATAAAGAAAGCGAGAAAGCTATGAGAGTTTATGTCAAAAGTGGACAATATCATACCATTGTGGAGATATCTGGAAATCGGTTGTCCCTAACACTTGGCTTGATTTGTTGATGAAGAAAAATTAATGGCGAACTAGAAGCATATGAGCCCATAATTATAAATGTTGAGCATTAAATTATTTCCTTAGAATGCTTTAGTTTGCATGGTCCAAGAAGCTATGGATTTGGAAATGAAAATTTGGCTGAGGGTTCCCATGTCTTTAAATGGAATACTTTTGGAATGAAAGGTGGATGCGTCTCCTTAAGAAAGTGGAGGAACATGTTCTAATGTTATGGGTGTTGGTGACTAGCTGAAAAAAATTATTTGGAGTGGGCTCATTAGCTAATTGGAATCATCAGATTTGTTACACCCATTCTGCCTGACAAAAGAAGAACAAAGCCGAATGGAGGAATAATTCAAAAACTTTCAGAGTTCTTTAAATGTCAGAGGTTAACTAGGATAGTAAATTGTCTGAAAATTTTCATAGATCATGAAGGTGGCTAATGTTACAAGGTTCTCTCCATTTCGTCGTTCTTGGCTTGTAGATCGAGTTTTAGTCCAAATGTTGTGATGGTGTGTTGATCGAAAAAAAATTAACTTGGTAGGCAGGAAAATTGATATTACTCATACTCATACATCTTGAAATATGGAGTTTGTCTATTTTTGAGTTCCCAACTTTTCATTATCTTTTTTGGTTTCTCGGATAAGTATTTCCTCTACTTTGTTTCTCACTCCAACCATATTGTTAGGGACAAATATTGCCTACATATTTTTACAATGGTATGATATTGTCCGCTTTAGGTAAACCCTCGTGCCTTTGGTTTTGATTTCACCCAAAAGGCCTCATATTATTTGAGATAATTGCTCTTGCTTATATATCATATGTCTTCACTTTATTTAACCAATGTGGGACTCTGGTCGTGCTGCTCTGTTGTTCTATGGTATCCCATATATGATTTGCACTTGAATTTTAAGTTATAGACTGGTACATGTATACCTTACGGAGTTCTGAGATTAAAGAACTTTTTCTTCTTCTGATTTGTTCTTCTGATCTCCATCTACAATGTTTTTAGATATGAAATGGCATCAAACAGATGGGTTGAAGAATCAAGTATACCAAGGAAAACTCCTCTCAACTCATCATATGGCTTTGTTGCATTGAATAGAGAATTGTATGTTATATCATTTCTAAAGATAGAATCTGCCGAAGCTCGAAGGCTACGACATCATAAGAAAGGAGGATCGCTGTACATGCAAATCTACAATCCCCAGCAGAAGACATGGAGATCTCTTGTTACCCGGTCGCCTTTTCACCACCTGATGGATTTCGATACGGCAGCTATTTGTACCGTTCGTATATGA ATGCCTTGTAATCCCCATGTGTACGGTCTCTGCAATTTCACCCCAATTTCCCTTGGCCCTCACTTGTATGTAATCGGCGGCTCTCTCTTCGACACTCGTTCTTATCCAATCGACCGTCCTTCTTCTTCCTCCTCTGCTTTCCGATTCGATTTCCATTCCTCCTTGTGGGAACCCATCTCGCCGATGTTGTCGCCGCGGGGGAGCTTTGCGTGCGCTGCGGTTCCTGATTCCGGACAGATTTTGGTGGCTGGAGGTGGGTCTAGGCACACGATGTTTGCGGCAGCCGGGAGTCGAATGAGCTCCGTTGAAAGGTATGATGTGGAGAGAGATGAGTGGGTTGCACTTGATGGGTTGCCGAGGTTTCGAGCTGGGTGTGTTGGGTTCTTTGTGGGAAATGGTGAGAAGAGAGAGTTTTGGGTGATGGGTGGCTATGGTGAATCAAGGACTATTTCAGGAGTGTTTCCTGTGGATGAATATTATAGGGATGCTGTTGTGATGGAGCTGAGGAATGGCCATGGCAGTGGGAGGTGGAGACAAATTGGGGATATGTGGGAAGAGGGGGAAAGGAGGAGGCTAGGAAAAATTGTGGTGATTGAGAATTATATCCATGGACAACCTGGAATTTTCATGCTTGATGGTGATGAATTCTTAAGATATGAAATGGCATCAAACAGATGGGTTGAAGAATCAAGTATACCAAGGAAAACTCCTCTCAACTCATCATATGGCTTTGTTGCATTGAATAGAGAATTGTATGTTATATCATTTCTAAAGATAGAATCTGCCGAAGCTCGAAGGCTACGACATCATAAGAAAGGAGGATCGCTGTACATGCAAATCTACAATCCCCAGCAGAAGACATGGAGATCTCTTGTTACCCGGTCGCCTTTTCACCACCTGATGGATTTCGATACGGCAGCTATTTGTACCGTTCGTATATGA ATGCCTTGTAATCCCCATGTGTACGGTCTCTGCAATTTCACCCCAATTTCCCTTGGCCCTCACTTGTATGTAATCGGCGGCTCTCTCTTCGACACTCGTTCTTATCCAATCGACCGTCCTTCTTCTTCCTCCTCTGCTTTCCGATTCGATTTCCATTCCTCCTTGTGGGAACCCATCTCGCCGATGTTGTCGCCGCGGGGGAGCTTTGCGTGCGCTGCGGTTCCTGATTCCGGACAGATTTTGGTGGCTGGAGGTGGGTCTAGGCACACGATGTTTGCGGCAGCCGGGAGTCGAATGAGCTCCGTTGAAAGGTATGATGTGGAGAGAGATGAGTGGGTTGCACTTGATGGGTTGCCGAGGTTTCGAGCTGGGTGTGTTGGGTTCTTTGTGGGAAATGGTGAGAAGAGAGAGTTTTGGGTGATGGGTGGCTATGGTGAATCAAGGACTATTTCAGGAGTGTTTCCTGTGGATGAATATTATAGGGATGCTGTTGTGATGGAGCTGAGGAATGGCCATGGCAGTGGGAGGTGGAGACAAATTGGGGATATGTGGGAAGAGGGGGAAAGGAGGAGGCTAGGAAAAATTGTGGTGATTGAGAATTATATCCATGGACAACCTGGAATTTTCATGCTTGATGGTGATGAATTCTTAAGATATGAAATGGCATCAAACAGATGGGTTGAAGAATCAAGTATACCAAGGAAAACTCCTCTCAACTCATCATATGGCTTTGTTGCATTGAATAGAGAATTGTATGTTATATCATTTCTAAAGATAGAATCTGCCGAAGCTCGAAGGCTACGACATCATAAGAAAGGAGGATCGCTGTACATGCAAATCTACAATCCCCAGCAGAAGACATGGAGATCTCTTGTTACCCGGTCGCCTTTTCACCACCTGATGGATTTCGATACGGCAGCTATTTGTACCGTTCGTATATGA MPCNPHVYGLCNFTPISLGPHLYVIGGSLFDTRSYPIDRPSSSSSAFRFDFHSSLWEPISPMLSPRGSFACAAVPDSGQILVAGGGSRHTMFAAAGSRMSSVERYDVERDEWVALDGLPRFRAGCVGFFVGNGEKREFWVMGGYGESRTISGVFPVDEYYRDAVVMELRNGHGSGRWRQIGDMWEEGERRRLGKIVVIENYIHGQPGIFMLDGDEFLRYEMASNRWVEESSIPRKTPLNSSYGFVALNRELYVISFLKIESAEARRLRHHKKGGSLYMQIYNPQQKTWRSLVTRSPFHHLMDFDTAAICTVRI
BLAST of Cla005999 vs. Swiss-Prot
Match: FK125_ARATH (F-box/kelch-repeat protein OR23 OS=Arabidopsis thaliana GN=OR23 PE=2 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 1.9e-108 Identity = 192/322 (59.63%), Postives = 239/322 (74.22%), Query Frame = 1
BLAST of Cla005999 vs. Swiss-Prot
Match: KLH34_HUMAN (Kelch-like protein 34 OS=Homo sapiens GN=KLHL34 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.1e-06 Identity = 42/128 (32.81%), Postives = 57/128 (44.53%), Query Frame = 1
BLAST of Cla005999 vs. Swiss-Prot
Match: FK113_ARATH (F-box/kelch-repeat protein At5g26960 OS=Arabidopsis thaliana GN=At5g26960 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.6e-06 Identity = 42/127 (33.07%), Postives = 55/127 (43.31%), Query Frame = 1
BLAST of Cla005999 vs. TrEMBL
Match: M5W2T5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006564mg PE=4 SV=1) HSP 1 Score: 495.4 bits (1274), Expect = 5.3e-137 Identity = 227/315 (72.06%), Postives = 276/315 (87.62%), Query Frame = 1
BLAST of Cla005999 vs. TrEMBL
Match: F6HZH3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g02960 PE=4 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 7.6e-128 Identity = 217/312 (69.55%), Postives = 263/312 (84.29%), Query Frame = 1
BLAST of Cla005999 vs. TrEMBL
Match: W9S979_9ROSA (F-box/kelch-repeat protein OS=Morus notabilis GN=L484_009770 PE=4 SV=1) HSP 1 Score: 463.4 bits (1191), Expect = 2.2e-127 Identity = 215/315 (68.25%), Postives = 267/315 (84.76%), Query Frame = 1
BLAST of Cla005999 vs. TrEMBL
Match: A0A061DQ26_THECC (Galactose oxidase/kelch repeat superfamily protein OS=Theobroma cacao GN=TCM_004136 PE=4 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 2.4e-126 Identity = 214/315 (67.94%), Postives = 266/315 (84.44%), Query Frame = 1
BLAST of Cla005999 vs. TrEMBL
Match: K4CUP6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 2.7e-125 Identity = 212/314 (67.52%), Postives = 259/314 (82.48%), Query Frame = 1
BLAST of Cla005999 vs. NCBI nr
Match: gi|659123887|ref|XP_008461887.1| (PREDICTED: F-box/kelch-repeat protein OR23 [Cucumis melo]) HSP 1 Score: 573.5 bits (1477), Expect = 2.2e-160 Identity = 278/314 (88.54%), Postives = 293/314 (93.31%), Query Frame = 1
BLAST of Cla005999 vs. NCBI nr
Match: gi|449468544|ref|XP_004151981.1| (PREDICTED: F-box/kelch-repeat protein OR23 [Cucumis sativus]) HSP 1 Score: 559.7 bits (1441), Expect = 3.3e-156 Identity = 273/314 (86.94%), Postives = 287/314 (91.40%), Query Frame = 1
BLAST of Cla005999 vs. NCBI nr
Match: gi|1009147410|ref|XP_015891396.1| (PREDICTED: F-box/kelch-repeat protein OR23 [Ziziphus jujuba]) HSP 1 Score: 499.6 bits (1285), Expect = 4.0e-138 Identity = 234/316 (74.05%), Postives = 283/316 (89.56%), Query Frame = 1
BLAST of Cla005999 vs. NCBI nr
Match: gi|595792285|ref|XP_007199891.1| (hypothetical protein PRUPE_ppa006564mg [Prunus persica]) HSP 1 Score: 495.4 bits (1274), Expect = 7.5e-137 Identity = 227/315 (72.06%), Postives = 276/315 (87.62%), Query Frame = 1
BLAST of Cla005999 vs. NCBI nr
Match: gi|645260204|ref|XP_008235722.1| (PREDICTED: F-box/kelch-repeat protein OR23 [Prunus mume]) HSP 1 Score: 493.4 bits (1269), Expect = 2.9e-136 Identity = 226/315 (71.75%), Postives = 276/315 (87.62%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |