Cla005899 (gene) Watermelon (97103) v1

BLAST of Cla005899 vs. Swiss-Prot
Match: PP328_ARATH (Pentatricopeptide repeat-containing protein At4g20740 OS=Arabidopsis thaliana GN=At4g20740 PE=3 SV=1)

HSP 1 Score: 891.3 bits (2302), Expect = 6.9e-258
Identity = 450/734 (61.31%), Postives = 564/734 (76.84%), Query Frame = 1

Query: 2   PPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQ------ 61
           PP +  K  K  F++GHR   P+Q+RPTVYGGLFSNRQS+        +SP+PQ      
Sbjct: 6   PPNLSDKSLKPNFFHGHR--KPSQNRPTVYGGLFSNRQSIPR------VSPQPQSNSLAH 65

Query: 62  --PFLLHNWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVIS 121
             PF L  WDP+      S   PS S    ++S RLSPIARF++DAFRKN+N WGP V+S
Sbjct: 66  RTPFDLRKWDPETHLPPPS--PPSHSTVISAASERLSPIARFVLDAFRKNRNHWGPSVVS 125

Query: 122 ELSKLRRVTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRH 181
           EL+KLRRVTP +VAEVLK  +    +  +A+KFFHWAGKQKG+ H+FA+YNAFAYCLNR+
Sbjct: 126 ELNKLRRVTPSIVAEVLKLGN----DAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRN 185

Query: 182 NRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLY 241
             FRAADQ+PELMDSQG+PPSEKQFEILIRMH D  RGLRVYYVYEKMKKFG  PRVFLY
Sbjct: 186 GHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLY 245

Query: 242 NRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRA 301
           NRI+DALVK G+ DLAL+VY DF+E+GLVEES TFMIL+KGLCKAGR++EMLE+L RMR 
Sbjct: 246 NRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRE 305

Query: 302 NLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQK 361
           NLCKPDVFAYTAM+K LVSE NL+  LRVWDEM+ D ++PDVMAYGTL++GLCK GRV++
Sbjct: 306 NLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVER 365

Query: 362 GFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIK 421
           G+ELF EMKGK+ILIDR IY  LIE FV D KV  AC+L +DLVDSGY AD+GIY+++IK
Sbjct: 366 GYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIK 425

Query: 422 GLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRMDDFWKLLTLLQKLELYV 481
           GLC+VNQVDKAYKLFQ+ I E+L+PDFET+ PIM+  V   R+ DF  +L  + +L   V
Sbjct: 426 GLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPV 485

Query: 482 DNVLSKFLSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYN 541
            + L++F   +  +E+K   ALDVF  +  KG+GSV++YNI+M AL++ G  +K+L ++ 
Sbjct: 486 SDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFY 545

Query: 542 DMKSSNIEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKIC 601
           +M+    EPDSS+YSIAI CFVE G ++ AC  H KI+E+  VPS AAY SL++GL +I 
Sbjct: 546 EMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIG 605

Query: 602 EIDAVMLLVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAY 661
           EIDAVMLLVR+CL N+ESGP+EFKYALT+ HVCK   AE V+ V++EM Q+   ++ V Y
Sbjct: 606 EIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIY 665

Query: 662 SAIISGMSKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFF 721
            AIISGMSK+GT+  A++VF  L++ + +TEA+ +V EE+LI+  KKKTADLV  G+KFF
Sbjct: 666 CAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTADLVLSGIKFF 725

Query: 722 NLESKLKAKGSKLL 728
            LESKL+AKG +LL
Sbjct: 726 GLESKLRAKGCRLL 725

BLAST of Cla005899 vs. Swiss-Prot
Match: PP437_ARATH (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.3e-43
Identity = 157/640 (24.53%), Postives = 280/640 (43.75%), Query Frame = 1

Query: 121 VTPDLVAEVLKASHRRD------SNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHN 180
           ++ +LV+  LK  H  +       +P L  +FF++ G  +GF H+ AS+    + L + N
Sbjct: 59  LSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKAN 118

Query: 181 RFRAADQIPELMDSQGKPPSE-----------------KQFEILIRMHCDANRGLRVYYV 240
            F  A  + + +  +   PS+                   F++LI+ +  + R L    V
Sbjct: 119 LFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLV 178

Query: 241 YEKM-KKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLC 300
           ++ M  K  ++P V   + +L  LVK  H  LA+ ++ D    G+  +   +  +I+ LC
Sbjct: 179 FKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLC 238

Query: 301 KAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVM 360
           +   +    E++A M A  C  ++  Y  ++  L  ++ +   + +  ++    ++PDV+
Sbjct: 239 ELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVV 298

Query: 361 AYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDL 420
            Y TL+ GLCKV   + G E+  EM   R     A   SL+E   +  K+  A +L+K +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358

Query: 421 VDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRM 480
           VD G   +L +Y++LI  LC   +  +A  LF    +  L+P+  T   ++ M     ++
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418

Query: 481 DDFWKLLTLL----QKLELYVDNVL----SKFLSFMVEEEDKINTALDVFRGMNDKGYGS 540
           D     L  +     KL +Y  N L     KF      E             +N K   +
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM-------INKKLEPT 478

Query: 541 VAIYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQEACLSHN 600
           V  Y  +MG     G+  KAL +Y++M    I P   T++  +S     G I++A    N
Sbjct: 479 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 538

Query: 601 KIVELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESG--PLEFKYALTILHVC 660
           ++ E    P+   Y  + EG  +  ++      +++     E G  P  + Y   I  +C
Sbjct: 539 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM---TEKGIVPDTYSYRPLIHGLC 598

Query: 661 KSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGMSKYGTLDEAKKVFLHLRESRQLTEAN 720
            +G+A      ++ + + +C L+ + Y+ ++ G  + G L+EA  V    +E  Q     
Sbjct: 599 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV---CQEMVQRGVDL 658

Query: 721 CIVCEELLID-HMKKKTADLVRCGLKFFNLESKLKAKGSK 726
            +VC  +LID  +K K   L      FF L  ++  +G K
Sbjct: 659 DLVCYGVLIDGSLKHKDRKL------FFGLLKEMHDRGLK 679

HSP 2 Score: 131.3 bits (329), Expect = 4.2e-29
Identity = 108/525 (20.57%), Postives = 218/525 (41.52%), Query Frame = 1

Query: 154 KGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRGLR 213
           K    +  +Y    Y L +   F    ++ + M      PSE     L+       +   
Sbjct: 291 KDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEE 350

Query: 214 VYYVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILIK 273
              + +++  FGV P +F+YN ++D+L K      A  ++    + GL    +T+ ILI 
Sbjct: 351 ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410

Query: 274 GLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEP 333
             C+ G++D  L  L  M     K  V+ Y +++       ++        EM   ++EP
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470

Query: 334 DVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLL 393
            V+ Y +L+ G C  G++ K   L+ EM GK I      + +L+    +   +  A  L 
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530

Query: 394 KDLVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVET 453
            ++ +   + +   Y+ +I+G C    + KA++  +    + + PD  + +P++     T
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590

Query: 454 RRMDDFWKLLTLLQKLELYVDNVLSKFLSFMVEEEDKINTALDVFRGMNDKGYG-SVAIY 513
            +  +    +  L K    ++ +    L      E K+  AL V + M  +G    +  Y
Sbjct: 591 GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650

Query: 514 NIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQEACLSHNKIVE 573
            +++    ++   K    +  +M    ++PD   Y+  I    + G  +EA    + ++ 
Sbjct: 651 GVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710

Query: 574 LGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYALTILHVCKSGKAE 633
            G VP+   Y ++  GL K   ++   +L    +  + S P +  Y    L +   G+ +
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK-MQPVSSVPNQVTYG-CFLDILTKGEVD 770

Query: 634 MVIDV-LNEMVQQDCPLSAVAYSAIISGMSKYGTLDEAKKVFLHL 677
           M   V L+  + +    +   Y+ +I G  + G ++EA ++   +
Sbjct: 771 MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRM 813

HSP 3 Score: 102.4 bits (254), Expect = 2.1e-20
Identity = 94/399 (23.56%), Postives = 163/399 (40.85%), Query Frame = 1

Query: 186 MDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDALVKTGH 245
           M  +G  PS   F  L+     A        ++ +M ++ V P    YN +++   + G 
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557

Query: 246 LDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDVFAYTA 305
           +  A    ++  E G+V ++ ++  LI GLC  G+  E    +  +    C+ +   YT 
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617

Query: 306 MVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQEMKGKR 365
           ++     E  LE  L V  EM    V+ D++ YG LI G  K    +  F L +EM  + 
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677

Query: 366 ILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQVDKAY 425
           +  D  IY S+I+A  +      A  +   +++ G   +   Y ++I GLC    V++A 
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737

Query: 426 KLFQLTIREDLKPDFETVKPIMMMC---VETRRMDDFWKLLTLLQKL--ELYVDNVLSKF 485
            L        ++P       +   C   + T+   D  K + L   +   L  +      
Sbjct: 738 VLCS-----KMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNM 797

Query: 486 LSFMVEEEDKINTALDVFRGMNDKGYGSVAI-YNIIMGALHRYGQAKKALEIYNDMKSSN 545
           L      + +I  A ++   M   G     I Y  ++  L R    KKA+E++N M    
Sbjct: 798 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 857

Query: 546 IEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPS 579
           I PD   Y+  I      G++ +A    N+++  G +P+
Sbjct: 858 IRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891

HSP 4 Score: 98.2 bits (243), Expect = 3.9e-19
Identity = 62/209 (29.67%), Postives = 98/209 (46.89%), Query Frame = 1

Query: 154 KGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRGLR 213
           +G   +   Y +     ++   F+ A  I +LM ++G  P+E  +  +I   C A     
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735

Query: 214 VYYVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSV-YRDFQENGLVEESITFMILI 273
              +  KM+    VP    Y   LD L K G +D+  +V   +    GL+  + T+ +LI
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLI 795

Query: 274 KGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVE 333
           +G C+ GR++E  EL+ RM  +   PD   YT M+  L    +++  + +W+ M    + 
Sbjct: 796 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 855

Query: 334 PDVMAYGTLIIGLCKVGRVQKGFELFQEM 362
           PD +AY TLI G C  G + K  EL  EM
Sbjct: 856 PDRVAYNTLIHGCCVAGEMGKATELRNEM 883

BLAST of Cla005899 vs. Swiss-Prot
Match: PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 4.3e-42
Identity = 131/547 (23.95%), Postives = 252/547 (46.07%), Query Frame = 1

Query: 142 LASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEIL 201
           +A KFFH   +  G   +  +Y +    L + NR   A ++ E ++   + P    +  +
Sbjct: 256 MAWKFFHEI-EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 315

Query: 202 IRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGL 261
           I  +  A +    Y + E+ +  G +P V  YN IL  L K G +D AL V+ + +++  
Sbjct: 316 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA 375

Query: 262 VEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLR 321
              S T+ ILI  LC+AG++D   EL   M+     P+V     MV  L   + L+    
Sbjct: 376 PNLS-TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 435

Query: 322 VWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFV 381
           +++EM      PD + + +LI GL KVGRV   ++++++M       +  +Y SLI+ F 
Sbjct: 436 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 495

Query: 382 QDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFE 441
              +      + KD+++     DL + ++ +  +    + +K   +F+        PD  
Sbjct: 496 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 555

Query: 442 TVKPIMMMCVETRRMDDFWKLLTLLQKLELYVDNVLSKFLSFMVEEEDKINTALDVFRGM 501
           +   ++   ++    ++ ++L   +++    +D      +     +  K+N A  +   M
Sbjct: 556 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 615

Query: 502 NDKGYG-SVAIYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKI 561
             KG+  +V  Y  ++  L +  +  +A  ++ + KS  IE +   YS  I  F +VG+I
Sbjct: 616 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 675

Query: 562 QEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYAL 621
            EA L   ++++ G  P+   + SL + L K  EI+  ++  +  +  ++  P +  Y +
Sbjct: 676 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS-MKELKCTPNQVTYGI 735

Query: 622 TILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGMSKYGTLDEAKKVFLHLRESR 681
            I  +CK  K         EM +Q    S ++Y+ +ISG++K G + EA  +F   + + 
Sbjct: 736 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 795

Query: 682 QLTEANC 688
            + ++ C
Sbjct: 796 GVPDSAC 799

HSP 2 Score: 163.3 bits (412), Expect = 9.9e-39
Identity = 134/573 (23.39%), Postives = 250/573 (43.63%), Query Frame = 1

Query: 107 WGPPVISELSKLR-RVTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNA 166
           WGP   + LS L  +  P+ V  VL    RR  +   A ++F W  ++    H   SYN+
Sbjct: 48  WGPSAENTLSALSFKPQPEFVIGVL----RRLKDVNRAIEYFRWYERRTELPHCPESYNS 107

Query: 167 FAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFG 226
               + R   F A DQI   M   G  PS      ++     AN+    Y V + M+KF 
Sbjct: 108 LLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFK 167

Query: 227 VVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEML 286
             P    Y  ++ A     H D+ L++++  QE G       F  LI+G  K GRVD  L
Sbjct: 168 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 227

Query: 287 ELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGL 346
            LL  M+++    D+  Y   +        ++   + + E++ + ++PD + Y ++I  L
Sbjct: 228 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 287

Query: 347 CKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADL 406
           CK  R+ +  E+F+ ++  R +     Y ++I  +    K   A  LL+     G    +
Sbjct: 288 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 347

Query: 407 GIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRMDDFWKLLTL 466
             Y+ ++  L  + +VD+A K+F+  +++D  P+  T   ++ M     ++D  ++L   
Sbjct: 348 IAYNCILTCLRKMGKVDEALKVFE-EMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 407

Query: 467 LQKLELYVDNVLSKFLSFMVEEEDKINTALDVFRGMNDKGYGSVAI-YNIIMGALHRYGQ 526
           +QK  L+ +      +   + +  K++ A  +F  M+ K      I +  ++  L + G+
Sbjct: 408 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 467

Query: 527 AKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCS 586
              A ++Y  M  S+   +S  Y+  I  F   G+ ++    +  ++     P      +
Sbjct: 468 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 527

Query: 587 LSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQ 646
             + +FK  E +    +  +  A     P    Y++ I  + K+G A    ++   M +Q
Sbjct: 528 YMDCMFKAGEPEKGRAMFEEIKAR-RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 587

Query: 647 DCPLSAVAYSAIISGMSKYGTLDEAKKVFLHLR 678
            C L   AY+ +I G  K G +++A ++   ++
Sbjct: 588 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614

HSP 3 Score: 156.8 bits (395), Expect = 9.3e-37
Identity = 125/535 (23.36%), Postives = 233/535 (43.55%), Query Frame = 1

Query: 152 KQKGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRG 211
           + KG   +  +YN    CL +  +   A ++ E M     P +   + ILI M C A + 
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKL 394

Query: 212 LRVYYVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMIL 271
              + + + M+K G+ P V   N ++D L K+  LD A +++ +        + ITF  L
Sbjct: 395 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 454

Query: 272 IKGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRV 331
           I GL K GRVD+  ++  +M  + C+ +   YT+++K   +    E   +++ +M     
Sbjct: 455 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 514

Query: 332 EPDVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACD 391
            PD+    T +  + K G  +KG  +F+E+K +R + D   Y  LI   ++        +
Sbjct: 515 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 574

Query: 392 LLKDLVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCV 451
           L   + + G   D   Y+ +I G C   +V+KAY+L +    +  +P   T   ++    
Sbjct: 575 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 634

Query: 452 ETRRMDDFWKLLTLLQKLELYVDNVLSKFLSFMVEEEDKINTALDVFRGMNDKGY-GSVA 511
           +  R+D+ + L    +   + ++ V+   L     +  +I+ A  +   +  KG   ++ 
Sbjct: 635 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 694

Query: 512 IYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQEACLSHNKI 571
            +N ++ AL +  +  +AL  +  MK     P+  TY I I+   +V K  +A +   ++
Sbjct: 695 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 754

Query: 572 VELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYALTILHVCKSGK 631
            + G  PS  +Y ++  GL K   I     L     AN    P    Y   I  +    +
Sbjct: 755 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN-GGVPDSACYNAMIEGLSNGNR 814

Query: 632 AEMVIDVLNEMVQQDCPLSAVAYSAIISGMSKYGTLDEAKKVFLHLRESRQLTEA 686
           A     +  E  ++  P+       ++  + K   L++A  V   LRE+ +   A
Sbjct: 815 AMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHA 867

HSP 4 Score: 147.9 bits (372), Expect = 4.3e-34
Identity = 114/524 (21.76%), Postives = 224/524 (42.75%), Query Frame = 1

Query: 156 FHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVY 215
           F   F++Y       +  N       + + M   G  P+   F  LIR      R     
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223

Query: 216 YVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILIKGL 275
            + ++MK   +   + LYN  +D+  K G +D+A   + + + NGL  + +T+  +I  L
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283

Query: 276 CKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDV 335
           CKA R+DE +E+   +  N   P  +AY  M+    S    +    + +  +     P V
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343

Query: 336 MAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKD 395
           +AY  ++  L K+G+V +  ++F+EMK K    + + Y  LI+   +  K+  A +L   
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 403

Query: 396 LVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRR 455
           +  +G   ++   + ++  LC   ++D+A  +F+    +   PD  T   ++    +  R
Sbjct: 404 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 463

Query: 456 MDDFWKLLTLLQKLELYVDNVLSKFLSFMVEEEDKINTALDVFRGM-NDKGYGSVAIYNI 515
           +DD +K+   +   +   ++++   L        +      +++ M N      + + N 
Sbjct: 464 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 523

Query: 516 IMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELG 575
            M  + + G+ +K   ++ ++K+    PD+ +YSI I   ++ G   E       + E G
Sbjct: 524 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 583

Query: 576 SVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYALTILHVCKSGKAEMV 635
            V    AY  + +G  K  +++    L+ + +      P    Y   I  + K  + +  
Sbjct: 584 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEE-MKTKGFEPTVVTYGSVIDGLAKIDRLDEA 643

Query: 636 IDVLNEMVQQDCPLSAVAYSAIISGMSKYGTLDEAKKVFLHLRE 679
             +  E   +   L+ V YS++I G  K G +DEA  +   L +
Sbjct: 644 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685

HSP 5 Score: 92.0 bits (227), Expect = 2.8e-17
Identity = 69/302 (22.85%), Postives = 125/302 (41.39%), Query Frame = 1

Query: 100 FRKNQNQWGPPVISELSKLRRVTPD------LVAEVLKASHRRDSNPILASKFFHWAGKQ 159
           F+  + + G  +  E+ K RR  PD      L+  ++KA    ++  +  S       K+
Sbjct: 528 FKAGEPEKGRAMFEEI-KARRFVPDARSYSILIHGLIKAGFANETYELFYSM------KE 587

Query: 160 KGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRGLR 219
           +G   +  +YN       +  +   A Q+ E M ++G  P+   +  +I      +R   
Sbjct: 588 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 647

Query: 220 VYYVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILIK 279
            Y ++E+ K   +   V +Y+ ++D   K G +D A  +  +  + GL     T+  L+ 
Sbjct: 648 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 707

Query: 280 GLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEP 339
            L KA  ++E L     M+   C P+   Y  ++  L            W EM+   ++P
Sbjct: 708 ALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 767

Query: 340 DVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLL 396
             ++Y T+I GL K G + +   LF   K    + D A Y ++IE      +   A  L 
Sbjct: 768 STISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 822

BLAST of Cla005899 vs. Swiss-Prot
Match: PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.3e-41
Identity = 131/533 (24.58%), Postives = 251/533 (47.09%), Query Frame = 1

Query: 152 KQKGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRG 211
           + +G   N  +YN     L R +R   A ++   M+S G  P+   + + I  +  +   
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449

Query: 212 LRVYYVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMIL 271
           +     +EKMK  G+ P +   N  L +L K G    A  ++   ++ GLV +S+T+ ++
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 509

Query: 272 IKGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRV 331
           +K   K G +DE ++LL+ M  N C+PDV    +++  L   + ++   +++  MK  ++
Sbjct: 510 MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569

Query: 332 EPDVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACD 391
           +P V+ Y TL+ GL K G++Q+  ELF+ M  K    +   + +L +   ++++V +A  
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 629

Query: 392 LLKDLVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCV 451
           +L  ++D G   D+  Y+++I GL    QV +A   F   +++ + PDF T+  ++   V
Sbjct: 630 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH-QMKKLVYPDFVTLCTLLPGVV 689

Query: 452 ETRRMDDFWKLLTLL------QKLELYVDNVLSKFLSFMVEEEDKINTALDVFRGMNDKG 511
           +   ++D +K++T        Q   L+ ++++   L+     E  I+ A+     +   G
Sbjct: 690 KASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILA-----EAGIDNAVSFSERLVANG 749

Query: 512 Y----GSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQ 571
                 S+ +  I     H      + L      K   ++P   TY++ I   +E   I+
Sbjct: 750 ICRDGDSILVPIIRYSCKHNNVSGARTL-FEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 809

Query: 572 EACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYALT 631
            A     ++   G +P  A Y  L +   K  +ID +  L ++ ++  E       + + 
Sbjct: 810 IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKE-MSTHECEANTITHNIV 869

Query: 632 ILHVCKSGKAEMVIDVLNE-MVQQDCPLSAVAYSAIISGMSKYGTLDEAKKVF 674
           I  + K+G  +  +D+  + M  +D   +A  Y  +I G+SK G L EAK++F
Sbjct: 870 ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914

HSP 2 Score: 161.0 bits (406), Expect = 4.9e-38
Identity = 111/466 (23.82%), Postives = 213/466 (45.71%), Query Frame = 1

Query: 216 YVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILIKGL 275
           Y   KM++FG V   + YN ++  L+K+     A+ VYR     G      T+  L+ GL
Sbjct: 174 YALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGL 233

Query: 276 CKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDV 335
            K   +D ++ LL  M     KP+V+ +T  ++VL     +     +   M  +   PDV
Sbjct: 234 GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293

Query: 336 MAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKD 395
           + Y  LI  LC   ++    E+F++MK  R   DR  Y +L++ F  +  +        +
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353

Query: 396 LVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRR 455
           +   G+  D+  +  L+  LC      +A+    +   + + P+  T   ++   +   R
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413

Query: 456 MDDFWKLLTLLQKLELY-VDNVLSKFLSFMVEEEDKINTALDVFRGMNDKGYG-SVAIYN 515
           +DD  +L   ++ L +         F+ +  +  D + +AL+ F  M  KG   ++   N
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSV-SALETFEKMKTKGIAPNIVACN 473

Query: 516 IIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQEACLSHNKIVEL 575
             + +L + G+ ++A +I+  +K   + PDS TY++ + C+ +VG+I EA    ++++E 
Sbjct: 474 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 533

Query: 576 GSVPSAAAYCSLSEGLFKICEID-AVMLLVRDCLANIESGPLEFKYALTILHVCKSGKAE 635
           G  P      SL   L+K   +D A  + +R  +  ++  P    Y   +  + K+GK +
Sbjct: 534 GCEPDVIVVNSLINTLYKADRVDEAWKMFMR--MKEMKLKPTVVTYNTLLAGLGKNGKIQ 593

Query: 636 MVIDVLNEMVQQDCPLSAVAYSAIISGMSKYGTLDEAKKVFLHLRE 679
             I++   MVQ+ CP + + ++ +   + K   +  A K+   + +
Sbjct: 594 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD 636

HSP 3 Score: 141.0 bits (354), Expect = 5.3e-32
Identity = 113/460 (24.57%), Postives = 195/460 (42.39%), Query Frame = 1

Query: 155 GFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRV 214
           G   N  ++      L R  +   A +I + MD +G  P    + +LI   C A +    
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312

Query: 215 YYVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILIKG 274
             V+EKMK     P    Y  +LD       LD     + + +++G V + +TF IL+  
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372

Query: 275 LCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPD 334
           LCKAG   E  + L  MR     P++  Y  ++  L+    L+  L ++  M+   V+P 
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432

Query: 335 VMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLK 394
              Y   I    K G      E F++MK K I  +     + + +  +  +   A  +  
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 492

Query: 395 DLVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETR 454
            L D G   D   Y+ ++K    V ++D+A KL    +    +PD   V  ++    +  
Sbjct: 493 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD 552

Query: 455 RMDDFWKLLTLLQKLELYVDNVLSKFLSFMVEEEDKINTALDVFRGMNDKGYGSVAI-YN 514
           R+D+ WK+   +++++L    V    L   + +  KI  A+++F GM  KG     I +N
Sbjct: 553 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 612

Query: 515 IIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQEACLSHNKIVEL 574
            +   L +  +   AL++   M      PD  TY+  I   V+ G+++EA    +++ +L
Sbjct: 613 TLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL 672

Query: 575 GSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESGP 614
              P     C+L  G+ K   I+    ++ + L N    P
Sbjct: 673 -VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP 711

HSP 4 Score: 137.5 bits (345), Expect = 5.8e-31
Identity = 133/560 (23.75%), Postives = 237/560 (42.32%), Query Frame = 1

Query: 152  KQKGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRG 211
            K KG   N  + NA  Y L +  R R A QI   +   G  P    + ++++ +      
Sbjct: 460  KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519

Query: 212  LRVYYVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMIL 271
                 +  +M + G  P V + N +++ L K   +D A  ++   +E  L    +T+  L
Sbjct: 520  DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579

Query: 272  IKGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRV 331
            + GL K G++ E +EL   M    C P+   +  +   L   + +   L++  +M     
Sbjct: 580  LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639

Query: 332  EPDVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACD 391
             PDV  Y T+I GL K G+V++    F +MK K +  D     +L+   V+   +  A  
Sbjct: 640  VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYK 699

Query: 392  LLKDLVDSGYRADLGIY-HSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETV-KPIMMM 451
            ++ + + +       ++   LI  +     +D A    +  +   +  D +++  PI+  
Sbjct: 700  IITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 759

Query: 452  CVETRRM-------DDFWKLLTLLQKLELYVDNVLSKFLSFMVEEEDKINTALDVFRGMN 511
              +   +       + F K L +  KL  Y  N+L   L     E D I  A DVF  + 
Sbjct: 760  SCKHNNVSGARTLFEKFTKDLGVQPKLPTY--NLLIGGLL----EADMIEIAQDVFLQVK 819

Query: 512  DKG-YGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQ 571
              G    VA YN ++ A  + G+  +  E+Y +M +   E ++ T++I IS  V+ G + 
Sbjct: 820  STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD 879

Query: 572  EAC-LSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYAL 631
            +A  L ++ + +    P+A  Y  L +GL K   +     L    L +    P    Y +
Sbjct: 880  DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML-DYGCRPNCAIYNI 939

Query: 632  TILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGMSKYGTLDEAKKVFLHLRESR 691
             I    K+G+A+    +   MV++        YS ++  +   G +DE    F  L+ES 
Sbjct: 940  LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 999

Query: 692  QLTEANCIVCEELLIDHMKK 701
               +   +VC  L+I+ + K
Sbjct: 1000 LNPD---VVCYNLIINGLGK 1008

HSP 5 Score: 133.7 bits (335), Expect = 8.4e-30
Identity = 113/529 (21.36%), Postives = 230/529 (43.48%), Query Frame = 1

Query: 152 KQKGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILI-----RMHC 211
           ++ GF  N  SYN   + L +      A ++   M  +G  PS + +  L+     R   
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239

Query: 212 DANRGLRVYYVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESI 271
           D+  GL      ++M+  G+ P V+ +   +  L + G ++ A  + +   + G   + +
Sbjct: 240 DSVMGL-----LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVV 299

Query: 272 TFMILIKGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEM 331
           T+ +LI  LC A ++D   E+  +M+    KPD   Y  ++       +L+   + W EM
Sbjct: 300 TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 359

Query: 332 KVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKV 391
           + D   PDV+ +  L+  LCK G   + F+    M+ + IL +   Y +LI   ++  ++
Sbjct: 360 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 419

Query: 392 GVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPI 451
             A +L  ++   G +     Y   I           A + F+    + + P+       
Sbjct: 420 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 479

Query: 452 MMMCVETRRMDDFWKLLTLLQKLELYVDNVLSKFLSFMVEEEDKINTALDVFRGMNDKG- 511
           +    +  R  +  ++   L+ + L  D+V    +     +  +I+ A+ +   M + G 
Sbjct: 480 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 539

Query: 512 YGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQEACL 571
              V + N ++  L++  +  +A +++  MK   ++P   TY+  ++   + GKIQEA  
Sbjct: 540 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 599

Query: 572 SHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESG--PLEFKYALTIL 631
               +V+ G  P+   + +L + L   C+ D V L ++     ++ G  P  F Y   I 
Sbjct: 600 LFEGMVQKGCPPNTITFNTLFDCL---CKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 659

Query: 632 HVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGMSKYGTLDEAKKV 673
            + K+G+ +  +   ++M +   P   V    ++ G+ K   +++A K+
Sbjct: 660 GLVKNGQVKEAMCFFHQMKKLVYP-DFVTLCTLLPGVVKASLIEDAYKI 699

HSP 6 Score: 129.0 bits (323), Expect = 2.1e-28
Identity = 94/356 (26.40%), Postives = 164/356 (46.07%), Query Frame = 1

Query: 201  LIRMHCDANRGLRVYYVYEKMKK-FGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQEN 260
            +IR  C  N       ++EK  K  GV P++  YN ++  L++   +++A  V+   +  
Sbjct: 755  IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814

Query: 261  GLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGC 320
            G + +  T+  L+    K+G++DE+ EL   M  + C+ +   +  ++  LV   N++  
Sbjct: 815  GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874

Query: 321  LRVWDEMKVDR-VEPDVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIE 380
            L ++ ++  DR   P    YG LI GL K GR+ +  +LF+ M       + AIY  LI 
Sbjct: 875  LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934

Query: 381  AFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKP 440
             F +  +   AC L K +V  G R DL  Y  L+  LC V +VD+    F+      L P
Sbjct: 935  GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994

Query: 441  DFETVKPIMMMCVETRRMDDFWKLLTLLQKL-----ELYVDN--VLSKFLSFMVEEEDKI 500
            D      I+    ++ R+++   L   ++       +LY  N  +L+  ++ MVEE  KI
Sbjct: 995  DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054

Query: 501  NTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTY 548
               +    G+      +V  +N ++      G+ + A  +Y  M +    P++ TY
Sbjct: 1055 YNEIQ-RAGLEP----NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105

HSP 7 Score: 128.3 bits (321), Expect = 3.5e-28
Identity = 111/526 (21.10%), Postives = 222/526 (42.21%), Query Frame = 1

Query: 162  SYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKM 221
            +YN     L ++ + + A ++ E M  +G PP+   F  L    C  +       +  KM
Sbjct: 575  TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634

Query: 222  KKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRV 281
               G VP VF YN I+  LVK G +  A+  +   ++  +  + +T   L+ G+ KA  +
Sbjct: 635  MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLI 694

Query: 282  DEMLELLARMRANLC-KPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGT 341
            ++  +++     N   +P    +  ++  +++E  ++  +   + +  + +  D  +   
Sbjct: 695  EDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILV 754

Query: 342  LIIGL-CKVGRVQKGFELFQEM-KGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVD 401
             II   CK   V     LF++  K   +      Y  LI   ++ + + +A D+   +  
Sbjct: 755  PIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS 814

Query: 402  SGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRMDD 461
            +G   D+  Y+ L+       ++D+ ++L++     + + +  T   ++   V+   +DD
Sbjct: 815  TGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD 874

Query: 462  FWKLLTLLQKLELYVDNVLSKFLSFM----------VEEEDKINTALDVFRGMNDKGYG- 521
                      L+LY D +  +  S            + +  ++  A  +F GM D G   
Sbjct: 875  ---------ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 934

Query: 522  SVAIYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQEACLSH 581
            + AIYNI++    + G+A  A  ++  M    + PD  TYS+ + C   VG++ E     
Sbjct: 935  NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 994

Query: 582  NKIVELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYALTILHVCK 641
             ++ E G  P    Y  +  GL K   ++  ++L  +   +    P  + Y   IL++  
Sbjct: 995  KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1054

Query: 642  SGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGMSKYGTLDEAKKVF 674
            +G  E    + NE+ +     +   ++A+I G S  G  + A  V+
Sbjct: 1055 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1090

HSP 8 Score: 124.0 bits (310), Expect = 6.7e-27
Identity = 113/530 (21.32%), Postives = 223/530 (42.08%), Query Frame = 1

Query: 154 KGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRGL- 213
           +G   +  +Y      L    +   A ++ E M +    P    +  L+    D NR L 
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD-NRDLD 346

Query: 214 RVYYVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILI 273
            V   + +M+K G VP V  +  ++DAL K G+   A       ++ G++    T+  LI
Sbjct: 347 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 406

Query: 274 KGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVE 333
            GL +  R+D+ LEL   M +   KP  + Y   +       +    L  +++MK   + 
Sbjct: 407 CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 466

Query: 334 PDVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDL 393
           P+++A    +  L K GR ++  ++F  +K   ++ D   Y  +++ + +  ++  A  L
Sbjct: 467 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 526

Query: 394 LKDLVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVE 453
           L +++++G   D+ + +SLI  L   ++VD+A+K+F       LKP   T   ++    +
Sbjct: 527 LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 586

Query: 454 TRRMDDFWKLLTLLQKLELYVDNVLSKFLSFMVEEEDKINTALDVFRGMNDKG-YGSVAI 513
             ++ +  +L   + +     + +    L   + + D++  AL +   M D G    V  
Sbjct: 587 NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 646

Query: 514 YNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQEAC-LSHNKI 573
           YN I+  L + GQ K+A+  ++ MK   + PD  T    +   V+   I++A  +  N +
Sbjct: 647 YNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFL 706

Query: 574 VELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYALTILHVCKSGK 633
                 P+   +  L   +     ID  +      +AN      +      I + CK   
Sbjct: 707 YNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNN 766

Query: 634 AEMVIDVLNEMVQQ-DCPLSAVAYSAIISGMSKYGTLDEAKKVFLHLRES 680
                 +  +  +          Y+ +I G+ +   ++ A+ VFL ++ +
Sbjct: 767 VSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814

HSP 9 Score: 116.3 bits (290), Expect = 1.4e-24
Identity = 100/448 (22.32%), Postives = 196/448 (43.75%), Query Frame = 1

Query: 234 NRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRA 293
           N +L+AL   G L+    V+   Q+  +  ++ T++ + K L   G + +    L +MR 
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181

Query: 294 NLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQK 353
                + ++Y  ++ +L+        + V+  M ++   P +  Y +L++GL K   +  
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241

Query: 354 GFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIK 413
              L +EM+   +  +   +   I    +  K+  A ++LK + D G   D+  Y  LI 
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301

Query: 414 GLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRMDDFWKLLTLLQKLELYV 473
            LC   ++D A ++F+       KPD  T   ++    + R +D   +  + ++K     
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361

Query: 474 DNVLSKFLSFMVEEEDKINTALDVFRGMNDKG-YGSVAIYNIIMGALHRYGQAKKALEIY 533
           D V    L   + +      A D    M D+G   ++  YN ++  L R  +   ALE++
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421

Query: 534 NDMKSSNIEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKI 593
            +M+S  ++P + TY + I  + + G    A  +  K+   G  P+  A C+ S      
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA-CNASLYSLAK 481

Query: 594 CEIDAVMLLVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVA 653
              D     +   L +I   P    Y + +    K G+ +  I +L+EM++  C    + 
Sbjct: 482 AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV 541

Query: 654 YSAIISGMSKYGTLDEAKKVFLHLRESR 681
            +++I+ + K   +DEA K+F+ ++E +
Sbjct: 542 VNSLINTLYKADRVDEAWKMFMRMKEMK 568

BLAST of Cla005899 vs. Swiss-Prot
Match: PP325_ARATH (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 1.6e-41
Identity = 136/530 (25.66%), Postives = 239/530 (45.09%), Query Frame = 1

Query: 152 KQKGFHHNFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRG 211
           ++ G   N  ++N     L    R+  A    E M  +G  P+   + IL++    A R 
Sbjct: 300 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 359

Query: 212 LRVYYVYEKMKKFGVVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMIL 271
              Y+V ++M K G  P V +YN ++D+ ++ G L+ A+ +       GL   S T+  L
Sbjct: 360 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 419

Query: 272 IKGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRV 331
           IKG CK G+ D    LL  M +     +  ++T+++ +L S    +  LR   EM +  +
Sbjct: 420 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM 479

Query: 332 EPDVMAYGTLIIGLCKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACD 391
            P      TLI GLCK G+  K  EL+ +   K  ++D     +L+    +  K+  A  
Sbjct: 480 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR 539

Query: 392 LLKDLVDSGYRADLGIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCV 451
           + K+++  G   D   Y++LI G C   ++D+A+      ++  LKPD  T   ++    
Sbjct: 540 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 599

Query: 452 ETRRMDD---FW---KLLTLLQKLELYVDNVLSKFLSFMVE---EEDKINTALDVFRGMN 511
              ++++   FW   K   +L  +  Y         S M++   + ++     + F  M 
Sbjct: 600 NMNKVEEAIQFWDDCKRNGMLPDVYTY---------SVMIDGCCKAERTEEGQEFFDEMM 659

Query: 512 DKG-YGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQ 571
            K    +  +YN ++ A  R G+   ALE+  DMK   I P+S+TY+  I     + +++
Sbjct: 660 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 719

Query: 572 EACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYALT 631
           EA L   ++   G  P+   Y +L +G  K+ ++  V  L+R+ + +    P +  Y + 
Sbjct: 720 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE-MHSKNVHPNKITYTVM 779

Query: 632 ILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGMSKYGTLDEAKK 672
           I    + G       +LNEM ++     ++ Y   I G  K G + EA K
Sbjct: 780 IGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819

HSP 2 Score: 138.7 bits (348), Expect = 2.6e-31
Identity = 117/514 (22.76%), Postives = 222/514 (43.19%), Query Frame = 1

Query: 168 YC--LNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFG 227
           YC    R   + A D  P L + +G  PS+    IL+     AN   +    ++ + K G
Sbjct: 211 YCTQFKRDGCYLALDVFPVLAN-KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-G 270

Query: 228 VVPRVFLYNRILDALVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEML 287
           V P V+L+   ++A  K G ++ A+ ++   +E G+    +TF  +I GL   GR DE  
Sbjct: 271 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 330

Query: 288 ELLARMRANLCKPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGL 347
               +M     +P +  Y+ +VK L   + +     V  EM      P+V+ Y  LI   
Sbjct: 331 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 390

Query: 348 CKVGRVQKGFELFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADL 407
            + G + K  E+   M  K + +  + Y +LI+ + ++ +   A  LLK+++  G+  + 
Sbjct: 391 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 450

Query: 408 GIYHSLIKGLCNVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRMDDFWKLLTL 467
           G + S+I  LC+    D A +     +  ++ P    +  ++    +  +     +L   
Sbjct: 451 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 510

Query: 468 LQKLELYVDNVLSKFLSFMVEEEDKINTALDVFRGMNDKGYGSVAI-YNIIMGALHRYGQ 527
                  VD   S  L   + E  K++ A  + + +  +G     + YN ++       +
Sbjct: 511 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 570

Query: 528 AKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCS 587
             +A    ++M    ++PD+ TYSI I     + K++EA    +     G +P    Y  
Sbjct: 571 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 630

Query: 588 LSEGLFKICEIDAVMLLVRDCLA-NIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQ 647
           + +G  K    +       + ++ N++  P    Y   I   C+SG+  M +++  +M  
Sbjct: 631 MIDGCCKAERTEEGQEFFDEMMSKNVQ--PNTVVYNHLIRAYCRSGRLSMALELREDMKH 690

Query: 648 QDCPLSAVAYSAIISGMSKYGTLDEAKKVFLHLR 678
           +    ++  Y+++I GMS    ++EAK +F  +R
Sbjct: 691 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 720

HSP 3 Score: 62.4 bits (150), Expect = 2.4e-08
Identity = 41/194 (21.13%), Postives = 86/194 (44.33%), Query Frame = 1

Query: 509 VAIYNIIMGALHRYGQAKKALEIYNDMKSSNIEPDSSTYSIAISCFVEVGKIQEACLSHN 568
           V ++   + A  + G+ ++A+++++ M+ + + P+  T++  I      G+  EA +   
Sbjct: 273 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 332

Query: 569 KIVELGSVPSAAAYCSLSEGLFKICEIDAVMLLVRDCLANIESGPLEFKYALTILHVCKS 628
           K+VE G  P+   Y  L +GL +   I     ++++ +      P    Y   I    ++
Sbjct: 333 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKE-MTKKGFPPNVIVYNNLIDSFIEA 392

Query: 629 GKAEMVIDVLNEMVQQDCPLSAVAYSAIISGMSKYGTLDEAKKVFLHLR------ESRQL 688
           G     I++ + MV +   L++  Y+ +I G  K G  D A+++   +            
Sbjct: 393 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 452

Query: 689 TEANCIVCEELLID 697
           T   C++C  L+ D
Sbjct: 453 TSVICLLCSHLMFD 465

BLAST of Cla005899 vs. TrEMBL
Match: A0A0A0KRS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G440110 PE=4 SV=1)

HSP 1 Score: 1325.1 bits (3428), Expect = 0.0e+00
Identity = 652/729 (89.44%), Postives = 690/729 (94.65%), Query Frame = 1

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLLH 60
           MPPQ   KPHKQYFYYGHRHRNP+QHRPTVYGG F+NR+SL PP+PH+P SPKPQPFLLH
Sbjct: 1   MPPQ---KPHKQYFYYGHRHRNPHQHRPTVYGGFFTNRRSLPPPSPHQPTSPKPQPFLLH 60

Query: 61  NWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLRR 120
           NWDPD PSQ+ SNL  S S+AFFS+SLRLSPIARFIVD FRKNQNQWGPPVISEL+KLRR
Sbjct: 61  NWDPDLPSQKRSNLPSSTSDAFFSTSLRLSPIARFIVDVFRKNQNQWGPPVISELNKLRR 120

Query: 121 VTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180
           VTPDLVAEVLKASHRRDSN ILASKFF+WAGKQKGFHH FASYNAFAYCLNRHNRFRAAD
Sbjct: 121 VTPDLVAEVLKASHRRDSNSILASKFFYWAGKQKGFHHTFASYNAFAYCLNRHNRFRAAD 180

Query: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240
           QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL
Sbjct: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240

Query: 241 VKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300
           VKT HLDLAL+VYRDFQENGLVEES+TFMILIKGLCKAGRVDEMLELLARMRANLCKPDV
Sbjct: 241 VKTDHLDLALTVYRDFQENGLVEESVTFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300

Query: 301 FAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQE 360
           FAYTAMVKVL S++NLEGCLRVWDEM+ DRVEPDVMAYGTLIIGLCKVGR QKG+ELFQE
Sbjct: 301 FAYTAMVKVLASKDNLEGCLRVWDEMRADRVEPDVMAYGTLIIGLCKVGRAQKGYELFQE 360

Query: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQ 420
           MKGKRILIDRAIYG+LIEAFVQDEKVG+ACDL KDLVDSGYRADLGIYHSLIKGLCNVNQ
Sbjct: 361 MKGKRILIDRAIYGTLIEAFVQDEKVGLACDLFKDLVDSGYRADLGIYHSLIKGLCNVNQ 420

Query: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRMDDFWKLLTLLQKLELYVDNVLSKF 480
           VDKAYKLFQLTIREDLKPDFETVKPIMMM VET RMDDFWKL++LLQKLE  VD+VLSKF
Sbjct: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMYVETGRMDDFWKLVSLLQKLEFSVDDVLSKF 480

Query: 481 LSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNI 540
           LSFMVEEEDKI+ ALDVF GM DKGYGSVA+YN+++GALHRYGQA KALEIYNDMK+SNI
Sbjct: 481 LSFMVEEEDKISVALDVFHGMIDKGYGSVALYNVMVGALHRYGQANKALEIYNDMKNSNI 540

Query: 541 EPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVML 600
           EP+S+TYSIA+ CFVE+GKIQEAC SHNKIVELGSVPS AAYCSLSEGLFKICEI+AVM+
Sbjct: 541 EPNSTTYSIALLCFVEIGKIQEACASHNKIVELGSVPSIAAYCSLSEGLFKICEINAVMM 600

Query: 601 LVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGM 660
           LVRDCLANIESGP EFKYALTI+H CKSGKAEMVIDVL EMV QDC  S+VAYSAIISGM
Sbjct: 601 LVRDCLANIESGPQEFKYALTIVHACKSGKAEMVIDVLKEMVLQDCVPSSVAYSAIISGM 660

Query: 661 SKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKLK 720
           SKYGTLDEAKKVFLHLRE +QLTEANCIVCEELLI+HMKKKTADLVRCGLKFFNLES+LK
Sbjct: 661 SKYGTLDEAKKVFLHLRERKQLTEANCIVCEELLIEHMKKKTADLVRCGLKFFNLESRLK 720

Query: 721 AKGSKLLST 730
           AKG  LLST
Sbjct: 721 AKGCNLLST 726

BLAST of Cla005899 vs. TrEMBL
Match: M5XK79_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023145mg PE=4 SV=1)

HSP 1 Score: 988.4 bits (2554), Expect = 4.6e-285
Identity = 500/729 (68.59%), Postives = 588/729 (80.66%), Query Frame = 1

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPIS-PKPQPFLL 60
           MPPQ P  P  Q F + H HR P+Q+RP V GGLFSNR SL  PN   PI+ P+PQPF L
Sbjct: 1   MPPQSPP-PKPQNFTFFHGHRKPSQNRPRVRGGLFSNRVSL--PNRRYPIAAPQPQPFEL 60

Query: 61  HNWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLR 120
             WDP  P    S  + +P++    S L  SPIARFI+DAFRKNQN WGPPV+SEL KLR
Sbjct: 61  SKWDPHLPQSSPSTSSSNPADTTLLSFL--SPIARFILDAFRKNQNHWGPPVVSELRKLR 120

Query: 121 RVTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAA 180
           RVTPDLVAEVLK  +    +P+ ASKFFHWAGKQKGF H +ASYNA AYCLNR NRFR+A
Sbjct: 121 RVTPDLVAEVLKVQN----DPVSASKFFHWAGKQKGFKHTYASYNALAYCLNRSNRFRSA 180

Query: 181 DQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDA 240
           DQ+PELMDSQGKPPSEKQFEILIRMH DANRGLRVYYVYEKMKKFGV PRVFLYNRI+DA
Sbjct: 181 DQVPELMDSQGKPPSEKQFEILIRMHSDANRGLRVYYVYEKMKKFGVKPRVFLYNRIMDA 240

Query: 241 LVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPD 300
           LVK+G+LDLALSVY DF+ +GLVEES+TFMILIKGLCK GR+DEML+LL RMR NLCKPD
Sbjct: 241 LVKSGYLDLALSVYEDFRGDGLVEESVTFMILIKGLCKMGRMDEMLQLLERMRVNLCKPD 300

Query: 301 VFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQ 360
           VFAYTAMVKVL+SE NL+GCLRVW+EMK DRV  DVMAY TL+ GLCK GRV+KG++LF+
Sbjct: 301 VFAYTAMVKVLISEGNLDGCLRVWEEMKRDRVGADVMAYATLVTGLCKGGRVEKGYKLFR 360

Query: 361 EMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVN 420
           EMK K  LIDRAIYG LIE FV D KVG ACDLLKDL+DSGYRADLGIY+SLI+GLCN  
Sbjct: 361 EMKVKGFLIDRAIYGVLIEGFVADRKVGAACDLLKDLMDSGYRADLGIYNSLIEGLCNAK 420

Query: 421 QVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRMDDFWKLLTLLQKLELYVDNVLSK 480
           +VDKAYK+F++T++E L+PDF TV PI++   E RRMD+F  +L  ++K +  V + LSK
Sbjct: 421 RVDKAYKIFRVTVQEGLQPDFATVNPILVSYAEMRRMDNFCDMLAEMEKFDFPVIDDLSK 480

Query: 481 FLSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSN 540
           F SFMV +ED +  AL+VF  +  KGY SV IYNI+MG+LH+ G+ KKAL ++N+MK  +
Sbjct: 481 FFSFMVGKEDGVPLALEVFGELKVKGYYSVGIYNILMGSLHKSGKVKKALSLFNEMKDVD 540

Query: 541 IEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVM 600
           ++PD+STYSIAI CFVE   I EAC SHNKI+E+  VPS +AYCSL+ GL K+ EID VM
Sbjct: 541 LQPDASTYSIAIMCFVEDEDIHEACASHNKIIEMSCVPSISAYCSLARGLCKVGEIDTVM 600

Query: 601 LLVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISG 660
           LLVRDCLA++ SGP+EFKY+LTILH CKS  AE VI+VLNEM+QQ CPL  V YSAIISG
Sbjct: 601 LLVRDCLASVTSGPMEFKYSLTILHACKSNNAEKVIEVLNEMMQQGCPLDDVIYSAIISG 660

Query: 661 MSKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKL 720
           M K+GT++EA K+F +L+E + LTEAN  V +E+LI+H+KKKTADLV  GLKFF LESKL
Sbjct: 661 MCKHGTIEEAMKIFSNLKERKLLTEANMFVYDEVLIEHVKKKTADLVVSGLKFFGLESKL 720

Query: 721 KAKGSKLLS 729
           KAKG KLLS
Sbjct: 721 KAKGCKLLS 720

BLAST of Cla005899 vs. TrEMBL
Match: D7SQ23_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01770 PE=4 SV=1)

HSP 1 Score: 976.9 bits (2524), Expect = 1.4e-281
Identity = 488/728 (67.03%), Postives = 590/728 (81.04%), Query Frame = 1

Query: 1   MPPQI-PSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLL 60
           MPPQ  P KPHK YF+YGHR   P+Q+RPTV+GGLFSNR +L+P  P   +      F L
Sbjct: 1   MPPQPQPPKPHKFYFFYGHR--KPSQNRPTVHGGLFSNRTTLNPKPP--TLQNPTTHFNL 60

Query: 61  HNWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLR 120
            NWDPD P       + +P E FF  +  LSPIAR+I D+FRK++N WGPPV+++L+KLR
Sbjct: 61  QNWDPDSPKALAIPPSKTPCERFFDIAKNLSPIARYICDSFRKHRN-WGPPVVADLNKLR 120

Query: 121 RVTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAA 180
           RVTP LVAEVLK      ++P++ SKFFHWAGKQKG+ HNFASYNAFAYCLNR N+FRAA
Sbjct: 121 RVTPVLVAEVLKVQ----TDPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAA 180

Query: 181 DQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDA 240
           DQ+PELM+ QGKPPSEKQFEILIRMH DANRGLRVYYVYEKMKKFG+ PRVFLYNRI+D 
Sbjct: 181 DQVPELMNMQGKPPSEKQFEILIRMHIDANRGLRVYYVYEKMKKFGIKPRVFLYNRIMDG 240

Query: 241 LVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPD 300
           LVKTGHLDLA+SVY DF+E+GLVEES+T+MIL+KGLCKAGR+DE+LELL RMR NLCKPD
Sbjct: 241 LVKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLELLDRMRGNLCKPD 300

Query: 301 VFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQ 360
           VFAYTAMVKVLV+E NL+GCLRVW+EM+ D+VEPDVMAY TL+  LC   RV +GFELF+
Sbjct: 301 VFAYTAMVKVLVAEGNLDGCLRVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFELFK 360

Query: 361 EMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVN 420
           EMK K+ LIDRAIYGSLIE FV +E+VG ACDLLKDL+DSGYRADL IY+SLI+G+CNV 
Sbjct: 361 EMKQKKYLIDRAIYGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVK 420

Query: 421 QVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRMDDFWKLLTLLQKLELYVDNVLSK 480
           QVDKAYKLFQ+T+ E L+P+F TVKP+++   E +RMDDF  LL  +QKL   V + LSK
Sbjct: 421 QVDKAYKLFQVTVHESLEPNFLTVKPMLVSYAEMKRMDDFCSLLGQMQKLGFPVIDDLSK 480

Query: 481 FLSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSN 540
           F S M+E+ +++  AL+VF  +  KGY S++IYNI+M A+HR G+ KKAL +++D+K SN
Sbjct: 481 FFSVMIEKGERLKLALEVFEHLKAKGYCSISIYNILMEAIHRTGEVKKALSLFDDIKDSN 540

Query: 541 IEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVM 600
            +PDSSTYS AI CFVEVG +QEAC  +NKI+E+  +PS AAY SL +GL K  EIDA +
Sbjct: 541 FKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAI 600

Query: 601 LLVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISG 660
           +LVRDCLAN+ SGP+EFKY LTILH CKSG AE VIDVLNEM+Q+ C    V YSA+ISG
Sbjct: 601 MLVRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISG 660

Query: 661 MSKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKL 720
           M K+GTL+EA+KVF ++RE + LTEAN IV +E+LI+HMKKKTADLV  GLKFF LESKL
Sbjct: 661 MCKHGTLEEARKVFSNMRERKLLTEANVIVYDEILIEHMKKKTADLVLSGLKFFGLESKL 719

Query: 721 KAKGSKLL 728
           ++KGS LL
Sbjct: 721 RSKGSTLL 719

BLAST of Cla005899 vs. TrEMBL
Match: B9GWJ6_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0003s20190g PE=4 SV=1)

HSP 1 Score: 959.9 bits (2480), Expect = 1.8e-276
Identity = 488/731 (66.76%), Postives = 585/731 (80.03%), Query Frame = 1

Query: 2   PPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLLHN 61
           PP  PSKP K YF+YGHR   P+Q+RP V GGLF+NRQ++ P  P  PI+P  +PF LH 
Sbjct: 6   PPPPPSKPLKPYFFYGHR--KPSQNRPVVRGGLFTNRQTVKPQPPKNPITPF-KPFDLHK 65

Query: 62  WDPDH--PSQQTSNLTPSP-SEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKL 121
           WDP    P Q   +   SP S    + S RLSPIARFI+DAFRKN+NQWGP V++EL KL
Sbjct: 66  WDPQQNLPHQPQPSKPQSPRSRHSLALSQRLSPIARFILDAFRKNRNQWGPEVVTELCKL 125

Query: 122 RRVTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRA 181
           RRVTPDLVAEVLK     ++NP LA+KFFHWAGKQKGF H FASYNAFAY LNR N FRA
Sbjct: 126 RRVTPDLVAEVLKV----ENNPQLATKFFHWAGKQKGFKHTFASYNAFAYNLNRSNFFRA 185

Query: 182 ADQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILD 241
           ADQ+PELM++QGKPP+EKQFEILIRMH DANRGLRVYYVY+KM KFGV PRVFLYNRI+D
Sbjct: 186 ADQLPELMEAQGKPPTEKQFEILIRMHSDANRGLRVYYVYQKMVKFGVKPRVFLYNRIMD 245

Query: 242 ALVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKP 301
           +L+KTGHLDLALSVY DF+ +GLVEES+T+MILIKGLCKAGR++EM+E+L RMR NLCKP
Sbjct: 246 SLIKTGHLDLALSVYEDFRRDGLVEESVTYMILIKGLCKAGRIEEMMEVLGRMRENLCKP 305

Query: 302 DVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELF 361
           DVFAYTAMV+ L  E NL+ CLRVW+EMK D VEPDVMAY TL+  LCK GRV KG+E+F
Sbjct: 306 DVFAYTAMVRALAGEGNLDACLRVWEEMKRDGVEPDVMAYVTLVTALCKGGRVDKGYEVF 365

Query: 362 QEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNV 421
           +EMKG+RILIDR IYG L+EAFV D K+G+ACDLLKDLVDSGYRADL IY+SLI+G CNV
Sbjct: 366 KEMKGRRILIDRGIYGILVEAFVADGKIGLACDLLKDLVDSGYRADLRIYNSLIEGFCNV 425

Query: 422 NQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRMDDFWKLLTLLQKLELYVDNVLS 481
            +VDKA+KLFQ+T++E L+ DF+TV P++M   E ++MDDF KLL  ++KL   V + LS
Sbjct: 426 KRVDKAHKLFQVTVQEGLERDFKTVNPLLMSYAEMKKMDDFCKLLKQMEKLGFSVFDDLS 485

Query: 482 KFLSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSS 541
           KF S++V + ++   AL+VF  +  KGY SV IYNI+M AL   G+ K+AL ++ +MK  
Sbjct: 486 KFFSYVVGKPERTMMALEVFEDLKVKGYSSVPIYNILMEALLTIGEMKRALSLFGEMKDL 545

Query: 542 NIEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAV 601
           N +PDS+TYSIAI CFVE G IQEAC+SHNKIVE+  VPS AAYCSL++GL    EIDA 
Sbjct: 546 N-KPDSTTYSIAIICFVEDGNIQEACVSHNKIVEMFCVPSVAAYCSLAKGLCDNGEIDAA 605

Query: 602 MLLVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIIS 661
           M+LVRDCLA++ESGP+EFKY+LTILH CK+G AE VIDVLNEM+Q+ C  + V YSAIIS
Sbjct: 606 MMLVRDCLASVESGPMEFKYSLTILHACKTGGAEKVIDVLNEMMQEGCTPNEVIYSAIIS 665

Query: 662 GMSKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESK 721
           GM K+GT +EA+KVF  LR+ + LTEA  IV +E+LI+HMKKKTADLV  GLKFF LESK
Sbjct: 666 GMCKHGTFEEARKVFTDLRQRKILTEAKTIVFDEILIEHMKKKTADLVLAGLKFFGLESK 725

Query: 722 LKAKGSKLLST 730
           LKA GS LL +
Sbjct: 726 LKAMGSTLLGS 728

BLAST of Cla005899 vs. TrEMBL
Match: G7J1P0_MEDTR (PPR containing plant-like protein OS=Medicago truncatula GN=MTR_3g023180 PE=4 SV=2)

HSP 1 Score: 951.8 bits (2459), Expect = 4.8e-274
Identity = 486/731 (66.48%), Postives = 591/731 (80.85%), Query Frame = 1

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKP-QPFLL 60
           MPPQ P+ P+K YF+YGHR   P+Q+RPTV GGLFSNR++L+PP   KP S KP   F +
Sbjct: 1   MPPQTPTPPNKFYFFYGHR--KPSQNRPTVRGGLFSNRKTLTPP---KPKSTKPTNSFQI 60

Query: 61  HNWDPDHPSQQTS-NLTPSPS-EAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSK 120
             WDP   SQ  S + +PSPS EA FS+SLRLSPIARFI+DAFRKN N WGPPV++EL+K
Sbjct: 61  QKWDPHFLSQPNSPSPSPSPSPEATFSASLRLSPIARFILDAFRKNNNNWGPPVVTELNK 120

Query: 121 LRRVTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFR 180
           LRRVTP LVAEVLK      +NP LA KFFHW  KQKG+HHNFASYNAF YCLNR N FR
Sbjct: 121 LRRVTPTLVAEVLKVQ----TNPTLAFKFFHWVEKQKGYHHNFASYNAFTYCLNRANHFR 180

Query: 181 AADQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMK-KFGVVPRVFLYNRI 240
           AADQ+PELMD+QGKPPSEKQFEILIRMH DA RGLRVY+VY+KM+ KFGV PRVFLYNRI
Sbjct: 181 AADQLPELMDAQGKPPSEKQFEILIRMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRI 240

Query: 241 LDALVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLC 300
           +DALVKTGHLDLALSVY DF+E+GLVEES+TFMILIKGLCK G++DEMLE+L RMR  LC
Sbjct: 241 MDALVKTGHLDLALSVYNDFREDGLVEESVTFMILIKGLCKGGKIDEMLEVLGRMREKLC 300

Query: 301 KPDVFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFE 360
           KPDVFAYTA+V+++V E NL+GCLRVW EMK DRV+PDVMAYGT+I GL K GRV +G+E
Sbjct: 301 KPDVFAYTALVRIMVKEGNLDGCLRVWKEMKRDRVDPDVMAYGTIIGGLAKGGRVSEGYE 360

Query: 361 LFQEMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLC 420
           LF+EMK K  LIDRAIYGSL+E+FV   KVG+A DLLKDLV SGYRADLG+Y++LI+GLC
Sbjct: 361 LFKEMKSKGHLIDRAIYGSLVESFVAGNKVGLAFDLLKDLVSSGYRADLGMYNNLIEGLC 420

Query: 421 NVNQVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRMDDFWKLLTLLQKLELYVDNV 480
           N+N+V+KAYKLFQ+TI+E L+PDF +VKP+++   E +RM++F+ LL  ++KL   V + 
Sbjct: 421 NLNKVEKAYKLFQVTIQEGLEPDFLSVKPLLLAYAEAKRMEEFFMLLEKMKKLGFPVIDD 480

Query: 481 LSKFLSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMK 540
           LSKF S +VE++     AL++F  + +K Y SV IYNI M +LH  G+ +KAL +++++K
Sbjct: 481 LSKFFSHLVEKKGP-EMALEIFTHLKEKSYVSVEIYNIFMESLHLSGKVEKALSLFDEIK 540

Query: 541 SSNIEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEID 600
            S++EPDSSTY+IAI C V+ G+I+EAC  HNKI+E+ S+PS AAY  L++GL  I EID
Sbjct: 541 GSDLEPDSSTYNIAILCLVDHGQIKEACECHNKIIEMSSIPSVAAYNCLAKGLCNIGEID 600

Query: 601 AVMLLVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAI 660
             MLLVRDCL N+ SGP+EFKY LTI+ +CKS  AE +IDVLNEM+Q+ C L  V  SAI
Sbjct: 601 EAMLLVRDCLGNVTSGPMEFKYCLTIIRMCKSNVAEKLIDVLNEMMQEGCSLDNVVCSAI 660

Query: 661 ISGMSKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLE 720
           ISGM KYGT++EA+KVF  LRE + LTE++ IV +ELLIDHMKKKTADLV  GLKFF LE
Sbjct: 661 ISGMCKYGTIEEARKVFSILRERKLLTESDTIVYDELLIDHMKKKTADLVISGLKFFGLE 720

Query: 721 SKLKAKGSKLL 728
           SKLK+KG KLL
Sbjct: 721 SKLKSKGCKLL 721

BLAST of Cla005899 vs. NCBI nr
Match: gi|449445049|ref|XP_004140286.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g20740 [Cucumis sativus])

HSP 1 Score: 1325.1 bits (3428), Expect = 0.0e+00
Identity = 652/729 (89.44%), Postives = 690/729 (94.65%), Query Frame = 1

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLLH 60
           MPPQ   KPHKQYFYYGHRHRNP+QHRPTVYGG F+NR+SL PP+PH+P SPKPQPFLLH
Sbjct: 1   MPPQ---KPHKQYFYYGHRHRNPHQHRPTVYGGFFTNRRSLPPPSPHQPTSPKPQPFLLH 60

Query: 61  NWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLRR 120
           NWDPD PSQ+ SNL  S S+AFFS+SLRLSPIARFIVD FRKNQNQWGPPVISEL+KLRR
Sbjct: 61  NWDPDLPSQKRSNLPSSTSDAFFSTSLRLSPIARFIVDVFRKNQNQWGPPVISELNKLRR 120

Query: 121 VTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180
           VTPDLVAEVLKASHRRDSN ILASKFF+WAGKQKGFHH FASYNAFAYCLNRHNRFRAAD
Sbjct: 121 VTPDLVAEVLKASHRRDSNSILASKFFYWAGKQKGFHHTFASYNAFAYCLNRHNRFRAAD 180

Query: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240
           QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL
Sbjct: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240

Query: 241 VKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300
           VKT HLDLAL+VYRDFQENGLVEES+TFMILIKGLCKAGRVDEMLELLARMRANLCKPDV
Sbjct: 241 VKTDHLDLALTVYRDFQENGLVEESVTFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300

Query: 301 FAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQE 360
           FAYTAMVKVL S++NLEGCLRVWDEM+ DRVEPDVMAYGTLIIGLCKVGR QKG+ELFQE
Sbjct: 301 FAYTAMVKVLASKDNLEGCLRVWDEMRADRVEPDVMAYGTLIIGLCKVGRAQKGYELFQE 360

Query: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQ 420
           MKGKRILIDRAIYG+LIEAFVQDEKVG+ACDL KDLVDSGYRADLGIYHSLIKGLCNVNQ
Sbjct: 361 MKGKRILIDRAIYGTLIEAFVQDEKVGLACDLFKDLVDSGYRADLGIYHSLIKGLCNVNQ 420

Query: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRMDDFWKLLTLLQKLELYVDNVLSKF 480
           VDKAYKLFQLTIREDLKPDFETVKPIMMM VET RMDDFWKL++LLQKLE  VD+VLSKF
Sbjct: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMYVETGRMDDFWKLVSLLQKLEFSVDDVLSKF 480

Query: 481 LSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNI 540
           LSFMVEEEDKI+ ALDVF GM DKGYGSVA+YN+++GALHRYGQA KALEIYNDMK+SNI
Sbjct: 481 LSFMVEEEDKISVALDVFHGMIDKGYGSVALYNVMVGALHRYGQANKALEIYNDMKNSNI 540

Query: 541 EPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVML 600
           EP+S+TYSIA+ CFVE+GKIQEAC SHNKIVELGSVPS AAYCSLSEGLFKICEI+AVM+
Sbjct: 541 EPNSTTYSIALLCFVEIGKIQEACASHNKIVELGSVPSIAAYCSLSEGLFKICEINAVMM 600

Query: 601 LVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGM 660
           LVRDCLANIESGP EFKYALTI+H CKSGKAEMVIDVL EMV QDC  S+VAYSAIISGM
Sbjct: 601 LVRDCLANIESGPQEFKYALTIVHACKSGKAEMVIDVLKEMVLQDCVPSSVAYSAIISGM 660

Query: 661 SKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKLK 720
           SKYGTLDEAKKVFLHLRE +QLTEANCIVCEELLI+HMKKKTADLVRCGLKFFNLES+LK
Sbjct: 661 SKYGTLDEAKKVFLHLRERKQLTEANCIVCEELLIEHMKKKTADLVRCGLKFFNLESRLK 720

Query: 721 AKGSKLLST 730
           AKG  LLST
Sbjct: 721 AKGCNLLST 726

BLAST of Cla005899 vs. NCBI nr
Match: gi|659072484|ref|XP_008465800.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g20740 [Cucumis melo])

HSP 1 Score: 1313.1 bits (3397), Expect = 0.0e+00
Identity = 646/729 (88.61%), Postives = 683/729 (93.69%), Query Frame = 1

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLLH 60
           MPPQ   KPHKQYFYYGHRHRNP+QHRPTVYGG F+NR+SL PP+PH+PISPKPQPFLLH
Sbjct: 1   MPPQ---KPHKQYFYYGHRHRNPHQHRPTVYGGFFTNRRSLPPPSPHQPISPKPQPFLLH 60

Query: 61  NWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLRR 120
           NWDPD PSQ+ SNL    S+AFFS+SLRLSPIARFIVD FRKNQNQWGPPV+SEL+KLRR
Sbjct: 61  NWDPDLPSQKRSNLPSFTSDAFFSTSLRLSPIARFIVDVFRKNQNQWGPPVLSELNKLRR 120

Query: 121 VTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAAD 180
           VTPDLVAEVLKASHRRDSNPILASKFF+WAGKQKGFHH FASYNAFAYCLNRHNRFRAAD
Sbjct: 121 VTPDLVAEVLKASHRRDSNPILASKFFYWAGKQKGFHHTFASYNAFAYCLNRHNRFRAAD 180

Query: 181 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240
           QIPELMDSQGKPPSEKQFEILIRMHCDA RGLRVYYVYEKMKKFGVVPRVFLYNRILDAL
Sbjct: 181 QIPELMDSQGKPPSEKQFEILIRMHCDAYRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 240

Query: 241 VKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPDV 300
           VKT HLDLAL+VYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRA LCKPDV
Sbjct: 241 VKTDHLDLALTVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRATLCKPDV 300

Query: 301 FAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQE 360
           FAYTAMVKV VS+ENLEGCLRVWDEM+ DRVEPDVMAYGTLIIGLCKVGR QKG+ELFQE
Sbjct: 301 FAYTAMVKVFVSKENLEGCLRVWDEMRADRVEPDVMAYGTLIIGLCKVGRAQKGYELFQE 360

Query: 361 MKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVNQ 420
           MKGKRILIDRAIYG+LIEAFVQDEKVG+ACDL KDLVDSGYRADLGIYHSLIKGLCN+NQ
Sbjct: 361 MKGKRILIDRAIYGTLIEAFVQDEKVGLACDLYKDLVDSGYRADLGIYHSLIKGLCNLNQ 420

Query: 421 VDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRMDDFWKLLTLLQKLELYVDNVLSKF 480
           V KAYKLFQLTIREDLKPDFETVKPIMMM VE  RMDD WKL+TLLQKLE  VD+VLSKF
Sbjct: 421 VHKAYKLFQLTIREDLKPDFETVKPIMMMYVEMGRMDDLWKLVTLLQKLEFSVDDVLSKF 480

Query: 481 LSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSNI 540
           L FMVEEEDKI+ ALD+F GM DKGYGSVA+YN+IMGALHRYGQA KALEIYNDMK+SNI
Sbjct: 481 LCFMVEEEDKISVALDLFHGMIDKGYGSVALYNVIMGALHRYGQANKALEIYNDMKNSNI 540

Query: 541 EPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVML 600
           EPDS+TYSIA+ CFVE+GKI+EAC SHNKI+ELGSVPS AAYCSLSEGLFKICEIDAVM+
Sbjct: 541 EPDSTTYSIAVLCFVEIGKIREACASHNKIIELGSVPSMAAYCSLSEGLFKICEIDAVMM 600

Query: 601 LVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISGM 660
           LVRDCLAN+ESGP EFKYALTI+H CKSGKAEMVIDVL EMV QDC  S+VAYSAIISGM
Sbjct: 601 LVRDCLANVESGPQEFKYALTIVHACKSGKAEMVIDVLKEMVLQDCAPSSVAYSAIISGM 660

Query: 661 SKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKLK 720
           SKYGT +EAKKVFLHLRE  QLTEANCIVCEELLI+HMKKKTADLVRCGLKFFNLES+LK
Sbjct: 661 SKYGTFNEAKKVFLHLRERSQLTEANCIVCEELLIEHMKKKTADLVRCGLKFFNLESRLK 720

Query: 721 AKGSKLLST 730
           AKG  LLST
Sbjct: 721 AKGCNLLST 726

BLAST of Cla005899 vs. NCBI nr
Match: gi|596053053|ref|XP_007220734.1| (hypothetical protein PRUPE_ppa023145mg [Prunus persica])

HSP 1 Score: 988.4 bits (2554), Expect = 6.6e-285
Identity = 500/729 (68.59%), Postives = 588/729 (80.66%), Query Frame = 1

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPIS-PKPQPFLL 60
           MPPQ P  P  Q F + H HR P+Q+RP V GGLFSNR SL  PN   PI+ P+PQPF L
Sbjct: 1   MPPQSPP-PKPQNFTFFHGHRKPSQNRPRVRGGLFSNRVSL--PNRRYPIAAPQPQPFEL 60

Query: 61  HNWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLR 120
             WDP  P    S  + +P++    S L  SPIARFI+DAFRKNQN WGPPV+SEL KLR
Sbjct: 61  SKWDPHLPQSSPSTSSSNPADTTLLSFL--SPIARFILDAFRKNQNHWGPPVVSELRKLR 120

Query: 121 RVTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAA 180
           RVTPDLVAEVLK  +    +P+ ASKFFHWAGKQKGF H +ASYNA AYCLNR NRFR+A
Sbjct: 121 RVTPDLVAEVLKVQN----DPVSASKFFHWAGKQKGFKHTYASYNALAYCLNRSNRFRSA 180

Query: 181 DQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDA 240
           DQ+PELMDSQGKPPSEKQFEILIRMH DANRGLRVYYVYEKMKKFGV PRVFLYNRI+DA
Sbjct: 181 DQVPELMDSQGKPPSEKQFEILIRMHSDANRGLRVYYVYEKMKKFGVKPRVFLYNRIMDA 240

Query: 241 LVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPD 300
           LVK+G+LDLALSVY DF+ +GLVEES+TFMILIKGLCK GR+DEML+LL RMR NLCKPD
Sbjct: 241 LVKSGYLDLALSVYEDFRGDGLVEESVTFMILIKGLCKMGRMDEMLQLLERMRVNLCKPD 300

Query: 301 VFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQ 360
           VFAYTAMVKVL+SE NL+GCLRVW+EMK DRV  DVMAY TL+ GLCK GRV+KG++LF+
Sbjct: 301 VFAYTAMVKVLISEGNLDGCLRVWEEMKRDRVGADVMAYATLVTGLCKGGRVEKGYKLFR 360

Query: 361 EMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVN 420
           EMK K  LIDRAIYG LIE FV D KVG ACDLLKDL+DSGYRADLGIY+SLI+GLCN  
Sbjct: 361 EMKVKGFLIDRAIYGVLIEGFVADRKVGAACDLLKDLMDSGYRADLGIYNSLIEGLCNAK 420

Query: 421 QVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRMDDFWKLLTLLQKLELYVDNVLSK 480
           +VDKAYK+F++T++E L+PDF TV PI++   E RRMD+F  +L  ++K +  V + LSK
Sbjct: 421 RVDKAYKIFRVTVQEGLQPDFATVNPILVSYAEMRRMDNFCDMLAEMEKFDFPVIDDLSK 480

Query: 481 FLSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSN 540
           F SFMV +ED +  AL+VF  +  KGY SV IYNI+MG+LH+ G+ KKAL ++N+MK  +
Sbjct: 481 FFSFMVGKEDGVPLALEVFGELKVKGYYSVGIYNILMGSLHKSGKVKKALSLFNEMKDVD 540

Query: 541 IEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVM 600
           ++PD+STYSIAI CFVE   I EAC SHNKI+E+  VPS +AYCSL+ GL K+ EID VM
Sbjct: 541 LQPDASTYSIAIMCFVEDEDIHEACASHNKIIEMSCVPSISAYCSLARGLCKVGEIDTVM 600

Query: 601 LLVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISG 660
           LLVRDCLA++ SGP+EFKY+LTILH CKS  AE VI+VLNEM+QQ CPL  V YSAIISG
Sbjct: 601 LLVRDCLASVTSGPMEFKYSLTILHACKSNNAEKVIEVLNEMMQQGCPLDDVIYSAIISG 660

Query: 661 MSKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKL 720
           M K+GT++EA K+F +L+E + LTEAN  V +E+LI+H+KKKTADLV  GLKFF LESKL
Sbjct: 661 MCKHGTIEEAMKIFSNLKERKLLTEANMFVYDEVLIEHVKKKTADLVVSGLKFFGLESKL 720

Query: 721 KAKGSKLLS 729
           KAKG KLLS
Sbjct: 721 KAKGCKLLS 720

BLAST of Cla005899 vs. NCBI nr
Match: gi|645251098|ref|XP_008231523.1| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g20740-like [Prunus mume])

HSP 1 Score: 986.1 bits (2548), Expect = 3.3e-284
Identity = 498/729 (68.31%), Postives = 586/729 (80.38%), Query Frame = 1

Query: 1   MPPQIPSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPIS-PKPQPFLL 60
           MPPQ P  P  Q F + H HR P+Q+RPTV GGL S R    PP P  P + P+PQPF L
Sbjct: 1   MPPQSPP-PKPQNFTFFHGHRKPSQNRPTVRGGLSSKR---GPPKPRYPTAAPQPQPFEL 60

Query: 61  HNWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLR 120
             WDP  P    S  + +P++    S L  SPIARFI+DAFRKNQN WGPPV+SEL KLR
Sbjct: 61  SKWDPHLPQSSPSTSSSNPADTTLLSFL--SPIARFILDAFRKNQNHWGPPVVSELRKLR 120

Query: 121 RVTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAA 180
           RVTPDLVAEVLK  +    +P+ ASKFFHWAGKQKGF H +ASYNA AYCLNR NRFR+A
Sbjct: 121 RVTPDLVAEVLKVQN----DPVSASKFFHWAGKQKGFKHTYASYNALAYCLNRSNRFRSA 180

Query: 181 DQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDA 240
           DQIPELMDSQGKPPSEKQFEILIRMH DANRGLRVYYVYEKMKKFGV PRVFLYNRI+DA
Sbjct: 181 DQIPELMDSQGKPPSEKQFEILIRMHSDANRGLRVYYVYEKMKKFGVKPRVFLYNRIMDA 240

Query: 241 LVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPD 300
           LVK+G+LDLALSVY DF+ +GLVEES+TFMILIKGLCK GR+DEML+LL RMR NLCKPD
Sbjct: 241 LVKSGYLDLALSVYEDFRGDGLVEESVTFMILIKGLCKMGRMDEMLQLLERMRVNLCKPD 300

Query: 301 VFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQ 360
           VFAYTAMVKVL+SE NL+GCLRVW+EMK DRV  DVMAY TL+ GLCK GRV+KG+ELF+
Sbjct: 301 VFAYTAMVKVLISEGNLDGCLRVWEEMKRDRVGADVMAYATLVTGLCKGGRVEKGYELFR 360

Query: 361 EMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVN 420
           EMK K  LIDRAIYG LIE FV D KVG ACDLLKDL+DSGYRADLGIY+SLI+GLCN  
Sbjct: 361 EMKVKGFLIDRAIYGMLIEGFVADRKVGAACDLLKDLMDSGYRADLGIYNSLIEGLCNAK 420

Query: 421 QVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRMDDFWKLLTLLQKLELYVDNVLSK 480
           QVDKAYK+F++T++E L+PDF TV PI++   E RRMD+F  +L  ++K +  V + LSK
Sbjct: 421 QVDKAYKIFRVTVQEGLQPDFATVNPILVSYAEMRRMDNFCDMLAEMEKFDFPVIDDLSK 480

Query: 481 FLSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSN 540
           F SFM+ +ED +  AL+VF  +  KGY SV IYNI+MG+LH+ G+ KKAL ++N+MK  +
Sbjct: 481 FFSFMLGKEDGVLLALEVFGELKVKGYYSVGIYNILMGSLHKSGKVKKALSLFNEMKDVD 540

Query: 541 IEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVM 600
           ++PD+STYSIAI CFVE   I EAC SHNKI+E+  VPS +AYCSL+ GL K+ EID VM
Sbjct: 541 LQPDASTYSIAIMCFVEDEDIHEACASHNKIIEMSCVPSISAYCSLARGLCKVGEIDTVM 600

Query: 601 LLVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISG 660
           LLVRDCLA++ SGP+EFKY+LTILH CKS  AE VI+VLNEM+Q+ CP   V YS+IISG
Sbjct: 601 LLVRDCLASVTSGPMEFKYSLTILHACKSNNAEKVIEVLNEMMQEGCPPDDVIYSSIISG 660

Query: 661 MSKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKL 720
           M K+GT++EA+K+F +L+E + LTEAN IV +E+LI+HMKKKTADLV  GLKFF LESKL
Sbjct: 661 MCKHGTIEEARKIFSNLKERKLLTEANVIVYDEVLIEHMKKKTADLVVSGLKFFGLESKL 719

Query: 721 KAKGSKLLS 729
           KAKG KLLS
Sbjct: 721 KAKGCKLLS 719

BLAST of Cla005899 vs. NCBI nr
Match: gi|731435404|ref|XP_010645700.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g20740 [Vitis vinifera])

HSP 1 Score: 976.9 bits (2524), Expect = 2.0e-281
Identity = 488/728 (67.03%), Postives = 590/728 (81.04%), Query Frame = 1

Query: 1   MPPQI-PSKPHKQYFYYGHRHRNPNQHRPTVYGGLFSNRQSLSPPNPHKPISPKPQPFLL 60
           MPPQ  P KPHK YF+YGHR   P+Q+RPTV+GGLFSNR +L+P  P   +      F L
Sbjct: 1   MPPQPQPPKPHKFYFFYGHR--KPSQNRPTVHGGLFSNRTTLNPKPP--TLQNPTTHFNL 60

Query: 61  HNWDPDHPSQQTSNLTPSPSEAFFSSSLRLSPIARFIVDAFRKNQNQWGPPVISELSKLR 120
            NWDPD P       + +P E FF  +  LSPIAR+I D+FRK++N WGPPV+++L+KLR
Sbjct: 61  QNWDPDSPKALAIPPSKTPCERFFDIAKNLSPIARYICDSFRKHRN-WGPPVVADLNKLR 120

Query: 121 RVTPDLVAEVLKASHRRDSNPILASKFFHWAGKQKGFHHNFASYNAFAYCLNRHNRFRAA 180
           RVTP LVAEVLK      ++P++ SKFFHWAGKQKG+ HNFASYNAFAYCLNR N+FRAA
Sbjct: 121 RVTPVLVAEVLKVQ----TDPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAA 180

Query: 181 DQIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDA 240
           DQ+PELM+ QGKPPSEKQFEILIRMH DANRGLRVYYVYEKMKKFG+ PRVFLYNRI+D 
Sbjct: 181 DQVPELMNMQGKPPSEKQFEILIRMHIDANRGLRVYYVYEKMKKFGIKPRVFLYNRIMDG 240

Query: 241 LVKTGHLDLALSVYRDFQENGLVEESITFMILIKGLCKAGRVDEMLELLARMRANLCKPD 300
           LVKTGHLDLA+SVY DF+E+GLVEES+T+MIL+KGLCKAGR+DE+LELL RMR NLCKPD
Sbjct: 241 LVKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLELLDRMRGNLCKPD 300

Query: 301 VFAYTAMVKVLVSEENLEGCLRVWDEMKVDRVEPDVMAYGTLIIGLCKVGRVQKGFELFQ 360
           VFAYTAMVKVLV+E NL+GCLRVW+EM+ D+VEPDVMAY TL+  LC   RV +GFELF+
Sbjct: 301 VFAYTAMVKVLVAEGNLDGCLRVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFELFK 360

Query: 361 EMKGKRILIDRAIYGSLIEAFVQDEKVGVACDLLKDLVDSGYRADLGIYHSLIKGLCNVN 420
           EMK K+ LIDRAIYGSLIE FV +E+VG ACDLLKDL+DSGYRADL IY+SLI+G+CNV 
Sbjct: 361 EMKQKKYLIDRAIYGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVK 420

Query: 421 QVDKAYKLFQLTIREDLKPDFETVKPIMMMCVETRRMDDFWKLLTLLQKLELYVDNVLSK 480
           QVDKAYKLFQ+T+ E L+P+F TVKP+++   E +RMDDF  LL  +QKL   V + LSK
Sbjct: 421 QVDKAYKLFQVTVHESLEPNFLTVKPMLVSYAEMKRMDDFCSLLGQMQKLGFPVIDDLSK 480

Query: 481 FLSFMVEEEDKINTALDVFRGMNDKGYGSVAIYNIIMGALHRYGQAKKALEIYNDMKSSN 540
           F S M+E+ +++  AL+VF  +  KGY S++IYNI+M A+HR G+ KKAL +++D+K SN
Sbjct: 481 FFSVMIEKGERLKLALEVFEHLKAKGYCSISIYNILMEAIHRTGEVKKALSLFDDIKDSN 540

Query: 541 IEPDSSTYSIAISCFVEVGKIQEACLSHNKIVELGSVPSAAAYCSLSEGLFKICEIDAVM 600
            +PDSSTYS AI CFVEVG +QEAC  +NKI+E+  +PS AAY SL +GL K  EIDA +
Sbjct: 541 FKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAI 600

Query: 601 LLVRDCLANIESGPLEFKYALTILHVCKSGKAEMVIDVLNEMVQQDCPLSAVAYSAIISG 660
           +LVRDCLAN+ SGP+EFKY LTILH CKSG AE VIDVLNEM+Q+ C    V YSA+ISG
Sbjct: 601 MLVRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISG 660

Query: 661 MSKYGTLDEAKKVFLHLRESRQLTEANCIVCEELLIDHMKKKTADLVRCGLKFFNLESKL 720
           M K+GTL+EA+KVF ++RE + LTEAN IV +E+LI+HMKKKTADLV  GLKFF LESKL
Sbjct: 661 MCKHGTLEEARKVFSNMRERKLLTEANVIVYDEILIEHMKKKTADLVLSGLKFFGLESKL 719

Query: 721 KAKGSKLL 728
           ++KGS LL
Sbjct: 721 RSKGSTLL 719