Cla005737 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCCAATTAGTTCTTGTAATGTGTTTTCCGGAGCTTGTGCTCTCATGCTCCTTGGGCTACACATTGCAATCTACCAAGCAGTTGCTAAAAATATTTTCATTGACGACGGAGGCTTCCCTATTATAGACAACGTATTGAGTGACCCGAGTATAAAACATCCAAAAAGGCATATCCTTTTCTCACAAGGGAAACCCAAGAAGGTACCTGACTTAGATCCGCCTTTCACCAGTGGAGTACTATCGAAAGACGGGCGCACTCCCCTGTCTGGACCGAGTCCAAGAACTTCGGACAATCCACATCCTCCACCGCATGTCTCATCCACCATTTTACATAAGAAATCTATGATCAACTTCAGAATGTTACCAAAAAATGAGCGTATTCCTCGATCTGGGCCGAGCCAAAGAACTTCAGAGAGTCCACCTACCCCACAGCATGTCCCATCCGTCATTTTACGCAAGGAATCTGGTATTGACTTTGAAATATTACCAAAAGGCGTCCACATGCTCCTTTCTTTATTTTAA ATGGTGCCAATTAGTTCTTGTAATGTGTTTTCCGGAGCTTGTGCTCTCATGCTCCTTGGGCTACACATTGCAATCTACCAAGCAGTTGCTAAAAATATTTTCATTGACGACGGAGGCTTCCCTATTATAGACAACGTATTGAGTGACCCGAGTATAAAACATCCAAAAAGGCATATCCTTTTCTCACAAGGGAAACCCAAGAAGGTACCTGACTTAGATCCGCCTTTCACCAGTGGAGTACTATCGAAAGACGGGCGCACTCCCCTGTCTGGACCGAGTCCAAGAACTTCGGACAATCCACATCCTCCACCGCATGTCTCATCCACCATTTTACATAAGAAATCTATGATCAACTTCAGAATGTTACCAAAAAATGAGCGTATTCCTCGATCTGGGCCGAGCCAAAGAACTTCAGAGAGTCCACCTACCCCACAGCATGTCCCATCCGTCATTTTACGCAAGGAATCTGGTATTGACTTTGAAATATTACCAAAAGGCGTCCACATGCTCCTTTCTTTATTTTAA ATGGTGCCAATTAGTTCTTGTAATGTGTTTTCCGGAGCTTGTGCTCTCATGCTCCTTGGGCTACACATTGCAATCTACCAAGCAGTTGCTAAAAATATTTTCATTGACGACGGAGGCTTCCCTATTATAGACAACGTATTGAGTGACCCGAGTATAAAACATCCAAAAAGGCATATCCTTTTCTCACAAGGGAAACCCAAGAAGGTACCTGACTTAGATCCGCCTTTCACCAGTGGAGTACTATCGAAAGACGGGCGCACTCCCCTGTCTGGACCGAGTCCAAGAACTTCGGACAATCCACATCCTCCACCGCATGTCTCATCCACCATTTTACATAAGAAATCTATGATCAACTTCAGAATGTTACCAAAAAATGAGCGTATTCCTCGATCTGGGCCGAGCCAAAGAACTTCAGAGAGTCCACCTACCCCACAGCATGTCCCATCCGTCATTTTACGCAAGGAATCTGGTATTGACTTTGAAATATTACCAAAAGGCGTCCACATGCTCCTTTCTTTATTTTAA MVPISSCNVFSGACALMLLGLHIAIYQAVAKNIFIDDGGFPIIDNVLSDPSIKHPKRHILFSQGKPKKVPDLDPPFTSGVLSKDGRTPLSGPSPRTSDNPHPPPHVSSTILHKKSMINFRMLPKNERIPRSGPSQRTSESPPTPQHVPSVILRKESGIDFEILPKGVHMLLSLF
BLAST of Cla005737 vs. TrEMBL
Match: A0A061FHV4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_035454 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.2e-07 Identity = 43/104 (41.35%), Postives = 53/104 (50.96%), Query Frame = 1
BLAST of Cla005737 vs. TrEMBL
Match: A0A061FHV4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_035454 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 7.7e-05 Identity = 31/67 (46.27%), Postives = 36/67 (53.73%), Query Frame = 1
HSP 2 Score: 62.0 bits (149), Expect = 8.3e-07 Identity = 54/161 (33.54%), Postives = 72/161 (44.72%), Query Frame = 1
BLAST of Cla005737 vs. TrEMBL
Match: A0A072VF40_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_1g032810 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.0e-04 Identity = 39/99 (39.39%), Postives = 48/99 (48.48%), Query Frame = 1
HSP 2 Score: 61.6 bits (148), Expect = 1.1e-06 Identity = 41/80 (51.25%), Postives = 49/80 (61.25%), Query Frame = 1
BLAST of Cla005737 vs. TrEMBL
Match: A0A072VF67_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_1g033200 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.8e-06 Identity = 44/118 (37.29%), Postives = 61/118 (51.69%), Query Frame = 1
BLAST of Cla005737 vs. TrEMBL
Match: A0A072VF67_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_1g033200 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.6e-05 Identity = 41/103 (39.81%), Postives = 54/103 (52.43%), Query Frame = 1
HSP 2 Score: 50.1 bits (118), Expect = 3.2e-03 Identity = 31/77 (40.26%), Postives = 43/77 (55.84%), Query Frame = 1
HSP 3 Score: 59.3 bits (142), Expect = 5.4e-06 Identity = 45/117 (38.46%), Postives = 58/117 (49.57%), Query Frame = 1
BLAST of Cla005737 vs. NCBI nr
Match: gi|731399706|ref|XP_010653709.1| (PREDICTED: proline-rich protein HaeIII subfamily 1-like [Vitis vinifera]) HSP 1 Score: 67.0 bits (162), Expect = 3.7e-08 Identity = 47/121 (38.84%), Postives = 59/121 (48.76%), Query Frame = 1
BLAST of Cla005737 vs. NCBI nr
Match: gi|731399706|ref|XP_010653709.1| (PREDICTED: proline-rich protein HaeIII subfamily 1-like [Vitis vinifera]) HSP 1 Score: 65.1 bits (157), Expect = 1.4e-07 Identity = 54/153 (35.29%), Postives = 71/153 (46.41%), Query Frame = 1
HSP 2 Score: 62.0 bits (149), Expect = 1.2e-06 Identity = 34/71 (47.89%), Postives = 40/71 (56.34%), Query Frame = 1
HSP 3 Score: 63.9 bits (154), Expect = 3.1e-07 Identity = 43/104 (41.35%), Postives = 53/104 (50.96%), Query Frame = 1
BLAST of Cla005737 vs. NCBI nr
Match: gi|590600249|ref|XP_007019406.1| (Uncharacterized protein TCM_035454 [Theobroma cacao]) HSP 1 Score: 55.5 bits (132), Expect = 1.1e-04 Identity = 31/67 (46.27%), Postives = 36/67 (53.73%), Query Frame = 1
HSP 2 Score: 62.0 bits (149), Expect = 1.2e-06 Identity = 54/161 (33.54%), Postives = 72/161 (44.72%), Query Frame = 1
BLAST of Cla005737 vs. NCBI nr
Match: gi|922398921|ref|XP_013466613.1| (transmembrane protein, putative [Medicago truncatula]) HSP 1 Score: 55.1 bits (131), Expect = 1.4e-04 Identity = 39/99 (39.39%), Postives = 48/99 (48.48%), Query Frame = 1
HSP 2 Score: 61.6 bits (148), Expect = 1.5e-06 Identity = 53/133 (39.85%), Postives = 63/133 (47.37%), Query Frame = 1
BLAST of Cla005737 vs. NCBI nr
Match: gi|778697779|ref|XP_011654399.1| (PREDICTED: proline-rich protein HaeIII subfamily 1-like [Cucumis sativus]) HSP 1 Score: 50.4 bits (119), Expect = 3.6e-03 Identity = 36/80 (45.00%), Postives = 47/80 (58.75%), Query Frame = 1
HSP 2 Score: 61.6 bits (148), Expect = 1.5e-06 Identity = 41/80 (51.25%), Postives = 49/80 (61.25%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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