Cla005639 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla005639
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Peroxisomal biogenesis factor 19 (AHRD V1 **-- B6TC68_MAIZE); contains Interpro domain(s) IPR006708 Pex19 protein
Location	Chr10 : 2896997 .. 2897580 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCCATTGTTGAGACCATGATGCAACAACTTTTGTCCAAAGAGATTCTTCATGAACCAATGAAGGAAATAGGAGAAAGATATCCTAAGTGGTTGGAGGATCATAAAGCAAGTTTGAGCAAAGAAGAATACGAACGCTATTCTCAGCAATACAAACTGATAAAAGATCTCAACATTGTGTACGAACACGAACCCAATAACTTCAATAAGATTGTGGAGCTCATGCAGAAAATGCAAGAATGTGGTCAGCCACCAAATGATATTGTGCAAGAGCTGGCACCCGATTTCGATTTAACTAATCTTGCACAACTGTGAGTATATTCGACCTGTGATTGTCAACTAGTTACAGTGCTCATCTCATTAATTTTATGTCTCTATGTTTTGTAATTTCACCATTTTCCTACAAGTAATAGCATAATTATATTTAAGTACATTAAAATGAAATTCTGAGATTTGTTGCGAGTAAAATGAAAAAACTAGATCAAATTTTGATGCTATGTTGAATAATCAATATACTCTCTCTTTCTATATGCAGATCTCCAGAAATGTTAGAGTCACAGACGAATTGTTGTATAATGTGA

mRNA sequence

ATGGAATCCATTGTTGAGACCATGATGCAACAACTTTTGTCCAAAGAGATTCTTCATGAACCAATGAAGGAAATAGGAGAAAGATATCCTAAGTGGTTGGAGGATCATAAAGCAAGTTTGAGCAAAGAAGAATACGAACGCTATTCTCAGCAATACAAACTGATAAAAGATCTCAACATTGTGTACGAACACGAACCCAATAACTTCAATAAGATTGTGGAGCTCATGCAGAAAATGCAAGAATGTGGTCAGCCACCAAATGATATTGTGCAAGAGCTGGCACCCGATTTCGATTTAACTAATCTTGCACAACTATCTCCAGAAATGTTAGAGTCACAGACGAATTGTTGTATAATGTGA

Coding sequence (CDS)

ATGGAATCCATTGTTGAGACCATGATGCAACAACTTTTGTCCAAAGAGATTCTTCATGAACCAATGAAGGAAATAGGAGAAAGATATCCTAAGTGGTTGGAGGATCATAAAGCAAGTTTGAGCAAAGAAGAATACGAACGCTATTCTCAGCAATACAAACTGATAAAAGATCTCAACATTGTGTACGAACACGAACCCAATAACTTCAATAAGATTGTGGAGCTCATGCAGAAAATGCAAGAATGTGGTCAGCCACCAAATGATATTGTGCAAGAGCTGGCACCCGATTTCGATTTAACTAATCTTGCACAACTATCTCCAGAAATGTTAGAGTCACAGACGAATTGTTGTATAATGTGA

Protein sequence

MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNIVYEHEPNNFNKIVELMQKMQECGQPPNDIVQELAPDFDLTNLAQLSPEMLESQTNCCIM

Homology

[Close]

BLAST of Cla005639 vs. Swiss-Prot
Match: PE192_ARATH (Peroxisome biogenesis protein 19-2 OS=Arabidopsis thaliana GN=PEX19-2 PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 2.9e-49
Identity = 87/119 (73.11%), Postives = 107/119 (89.92%), Query Frame = 1


Query: 1   MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNI 60
           +ESIV+TMMQQLLSK+ILHEPMKEIG RYPKWLE+H++SL+KEE++RYS+QY+LIK+LN+
Sbjct: 127 LESIVDTMMQQLLSKDILHEPMKEIGARYPKWLEEHESSLNKEEFDRYSRQYELIKELNL 186

Query: 61  VYEHEPNNFNKIVELMQKMQECGQPPNDIVQELAPDFDLTNLAQLSPEMLESQTNCCIM 120
           VYE+EPNN  KI+E+MQKMQECGQPP+DIVQE+ P FD  +L Q+SP+MLES  NCC+M
Sbjct: 187 VYENEPNNSTKIMEIMQKMQECGQPPSDIVQEMDPGFDFASLGQMSPDMLESSPNCCVM 245

[Close]

BLAST of Cla005639 vs. Swiss-Prot
Match: PE191_ARATH (Peroxisome biogenesis protein 19-1 OS=Arabidopsis thaliana GN=PEX19-1 PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 5.0e-49
Identity = 89/119 (74.79%), Postives = 107/119 (89.92%), Query Frame = 1


Query: 1   MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNI 60
           +ESIVETMMQQLLSK+ILHEPMKE+G RYPKWL++++ASLSKE+Y+RYSQQYKLI++LN 
Sbjct: 130 LESIVETMMQQLLSKDILHEPMKELGARYPKWLKENEASLSKEDYKRYSQQYKLIEELNA 189

Query: 61  VYEHEPNNFNKIVELMQKMQECGQPPNDIVQELAPDFDLTNLAQLSPEMLESQTNCCIM 120
           VYE+EPNN +KI+E+MQKMQECGQPP+DIV+E+ P FD  +L Q+SPEMLES  NCCIM
Sbjct: 190 VYENEPNNSSKIMEIMQKMQECGQPPSDIVKEIDPGFDFASLGQISPEMLESSPNCCIM 248

[Close]

BLAST of Cla005639 vs. Swiss-Prot
Match: PEX19_RAT (Peroxisomal biogenesis factor 19 OS=Rattus norvegicus GN=Pex19 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.6e-15
Identity = 43/127 (33.86%), Postives = 73/127 (57.48%), Query Frame = 1


Query: 4   IVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNIVYE 63
           I++++MQ LLSK++L+  +KEI E+YP+WL+ H+ S+  E++E+Y QQ+ ++  +   +E
Sbjct: 174 IMQSLMQNLLSKDVLYPSLKEITEKYPEWLQSHQESIPPEQFEKYQQQHSVMGKICEQFE 233

Query: 64  HEP---------NNFNKIVELMQKMQECGQPPNDIVQELAP--DFDLTNLAQLSPEMLES 120
            E            F  +++LMQ++Q+ G PP ++  E+ P  +FDL  L    P     
Sbjct: 234 AETPTDSEATHRARFEAVLDLMQQLQDLGHPPKELAGEMPPGLNFDLDALNLSGPPGANG 293

[Close]

BLAST of Cla005639 vs. Swiss-Prot
Match: PEX19_HUMAN (Peroxisomal biogenesis factor 19 OS=Homo sapiens GN=PEX19 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.1e-15
Identity = 45/127 (35.43%), Postives = 74/127 (58.27%), Query Frame = 1


Query: 4   IVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNIVYE 63
           I++++MQ LLSK++L+  +KEI E+YP+WL+ H+ SL  E++E+Y +Q+ ++  +   +E
Sbjct: 174 IMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESLPPEQFEKYQEQHSVMCKICEQFE 233

Query: 64  HE---------PNNFNKIVELMQKMQECGQPPNDIVQELAP--DFDLTNLAQLSPEMLES 120
            E            F  +++LMQ++Q+ G PP ++  E+ P  +FDL  L  LS     S
Sbjct: 234 AETPTDSETTQKARFEMVLDLMQQLQDLGHPPKELAGEMPPGLNFDLDAL-NLSGPPGAS 293

[Close]

BLAST of Cla005639 vs. Swiss-Prot
Match: PEX19_PONAB (Peroxisomal biogenesis factor 19 OS=Pongo abelii GN=PEX19 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.1e-15
Identity = 45/127 (35.43%), Postives = 74/127 (58.27%), Query Frame = 1


Query: 4   IVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNIVYE 63
           I++++MQ LLSK++L+  +KEI E+YP+WL+ H+ SL  E++E+Y +Q+ ++  +   +E
Sbjct: 174 IMQSIMQNLLSKDVLYPSLKEITEKYPEWLQSHRESLPPEQFEKYQEQHSVMCKICEQFE 233

Query: 64  HE---------PNNFNKIVELMQKMQECGQPPNDIVQELAP--DFDLTNLAQLSPEMLES 120
            E            F  +++LMQ++Q+ G PP ++  E+ P  +FDL  L  LS     S
Sbjct: 234 AETPTDSETTQKARFEMVLDLMQQLQDLGHPPKELAGEMPPGLNFDLDAL-NLSGPPGAS 293

[Close]

BLAST of Cla005639 vs. TrEMBL
Match: A0A0A0L283_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G020030 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 3.7e-59
Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 1


Query: 1   MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNI 60
           MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQY LIKDLNI
Sbjct: 119 MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYNLIKDLNI 178

Query: 61  VYEHEPNNFNKIVELMQKMQECGQPPNDIVQELAPDFDLTNLAQLSPEMLESQTNCCIM 120
           VYE EP+NFNKIVELMQKMQECGQPPNDIVQELAPDFDL+NLAQLSPEMLESQ NCCIM
Sbjct: 179 VYEREPDNFNKIVELMQKMQECGQPPNDIVQELAPDFDLSNLAQLSPEMLESQPNCCIM 237

[Close]

BLAST of Cla005639 vs. TrEMBL
Match: A0A061G438_THECC (Peroxin 19-2 OS=Theobroma cacao GN=TCM_015969 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.1e-53
Identity = 103/119 (86.55%), Postives = 114/119 (95.80%), Query Frame = 1


Query: 1   MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNI 60
           MESIVETMMQQLLSKEILHEPMKEIGERYP+WLE+H+ASLSKEEYERYS Q++LIK+LN 
Sbjct: 127 MESIVETMMQQLLSKEILHEPMKEIGERYPQWLEEHEASLSKEEYERYSHQHELIKELNG 186

Query: 61  VYEHEPNNFNKIVELMQKMQECGQPPNDIVQELAPDFDLTNLAQLSPEMLESQTNCCIM 120
           VYE+EPNNF +IV+LMQKMQECGQPPNDIVQELAP+FDL+NL QLSPEMLESQ NCCIM
Sbjct: 187 VYENEPNNFTRIVDLMQKMQECGQPPNDIVQELAPEFDLSNLGQLSPEMLESQQNCCIM 245

[Close]

BLAST of Cla005639 vs. TrEMBL
Match: A0A0B0NAV5_GOSAR (Peroxisome biogenesis 19-2-like protein OS=Gossypium arboreum GN=F383_15508 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-53
Identity = 102/119 (85.71%), Postives = 114/119 (95.80%), Query Frame = 1


Query: 1   MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNI 60
           MESIVETMMQQLLSKEILHEPMKEIGERYP+WLE+HKA+LSKEEYERYS+QY+LIK+LN 
Sbjct: 127 MESIVETMMQQLLSKEILHEPMKEIGERYPQWLEEHKANLSKEEYERYSRQYELIKELNG 186

Query: 61  VYEHEPNNFNKIVELMQKMQECGQPPNDIVQELAPDFDLTNLAQLSPEMLESQTNCCIM 120
           VYE++PNNF KIV+LMQKMQECGQPPNDIVQELAP+FDL+NL QLSPE+L SQ NCCIM
Sbjct: 187 VYENDPNNFTKIVDLMQKMQECGQPPNDIVQELAPEFDLSNLGQLSPEILNSQQNCCIM 245

[Close]

BLAST of Cla005639 vs. TrEMBL
Match: K4C6Q2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.0e-53
Identity = 103/119 (86.55%), Postives = 111/119 (93.28%), Query Frame = 1


Query: 1   MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNI 60
           MESIVETMMQQLLSKEILHEPM+EIGERYPKWLED+KA LS EEY+RY QQY+LI+DLN 
Sbjct: 130 MESIVETMMQQLLSKEILHEPMREIGERYPKWLEDNKAKLSGEEYDRYRQQYELIRDLNK 189

Query: 61  VYEHEPNNFNKIVELMQKMQECGQPPNDIVQELAPDFDLTNLAQLSPEMLESQTNCCIM 120
           VYE EP+NFNKIVELMQKMQECGQPPNDIVQELAPDFD++ L QLSPEMLESQ NCCIM
Sbjct: 190 VYETEPSNFNKIVELMQKMQECGQPPNDIVQELAPDFDISTLGQLSPEMLESQQNCCIM 248

[Close]

BLAST of Cla005639 vs. TrEMBL
Match: A0A0D2S2X3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G198700 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-52
Identity = 100/119 (84.03%), Postives = 114/119 (95.80%), Query Frame = 1


Query: 1   MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNI 60
           MESIVETMMQQLLSKEILHEPMKEIGERYP+WLE+HKA+LS+EEYERYS+QY+LIK+LN 
Sbjct: 127 MESIVETMMQQLLSKEILHEPMKEIGERYPQWLEEHKANLSEEEYERYSRQYELIKELNG 186

Query: 61  VYEHEPNNFNKIVELMQKMQECGQPPNDIVQELAPDFDLTNLAQLSPEMLESQTNCCIM 120
           VYE++PNNF +IV+LMQKMQECGQPPNDIVQELAP+FDL+NL QLSPEML SQ NCCI+
Sbjct: 187 VYENDPNNFTRIVDLMQKMQECGQPPNDIVQELAPEFDLSNLGQLSPEMLNSQQNCCII 245

[Close]

BLAST of Cla005639 vs. NCBI nr
Match: gi|778675391|ref|XP_011650400.1| (PREDICTED: peroxisome biogenesis protein 19-2 [Cucumis sativus])

HSP 1 Score: 235.3 bits (599), Expect = 5.4e-59
Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 1


Query: 1   MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNI 60
           MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQY LIKDLNI
Sbjct: 119 MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYNLIKDLNI 178

Query: 61  VYEHEPNNFNKIVELMQKMQECGQPPNDIVQELAPDFDLTNLAQLSPEMLESQTNCCIM 120
           VYE EP+NFNKIVELMQKMQECGQPPNDIVQELAPDFDL+NLAQLSPEMLESQ NCCIM
Sbjct: 179 VYEREPDNFNKIVELMQKMQECGQPPNDIVQELAPDFDLSNLAQLSPEMLESQPNCCIM 237

[Close]

BLAST of Cla005639 vs. NCBI nr
Match: gi|659095951|ref|XP_008448848.1| (PREDICTED: peroxisome biogenesis protein 19-1-like [Cucumis melo])

HSP 1 Score: 235.3 bits (599), Expect = 5.4e-59
Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 1


Query: 1   MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNI 60
           MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQY LIKDLNI
Sbjct: 124 MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYNLIKDLNI 183

Query: 61  VYEHEPNNFNKIVELMQKMQECGQPPNDIVQELAPDFDLTNLAQLSPEMLESQTNCCIM 120
           VYE EP+NFNKIVELMQKMQECGQPPNDIVQELAPDFDL+NLAQLSPEMLESQ NCCIM
Sbjct: 184 VYEREPDNFNKIVELMQKMQECGQPPNDIVQELAPDFDLSNLAQLSPEMLESQPNCCIM 242

[Close]

BLAST of Cla005639 vs. NCBI nr
Match: gi|1009181296|ref|XP_015872090.1| (PREDICTED: peroxisome biogenesis protein 19-2-like [Ziziphus jujuba])

HSP 1 Score: 219.2 bits (557), Expect = 4.0e-54
Identity = 103/119 (86.55%), Postives = 113/119 (94.96%), Query Frame = 1


Query: 1   MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNI 60
           MESIVETMMQQLLSKEILHEPMKEIGERYPKWLE+H++SLS+E+Y+RYS QYKLIKDLN 
Sbjct: 36  MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEEHESSLSREDYDRYSHQYKLIKDLNE 95

Query: 61  VYEHEPNNFNKIVELMQKMQECGQPPNDIVQELAPDFDLTNLAQLSPEMLESQTNCCIM 120
           VYE +P+NFNKIVELMQKMQECGQPPNDIV ELAPDFDL +L Q+SPEMLESQTNCCIM
Sbjct: 96  VYEKDPDNFNKIVELMQKMQECGQPPNDIVHELAPDFDLASLGQISPEMLESQTNCCIM 154

[Close]

BLAST of Cla005639 vs. NCBI nr
Match: gi|720009436|ref|XP_010258937.1| (PREDICTED: peroxisome biogenesis protein 19-2-like isoform X1 [Nelumbo nucifera])

HSP 1 Score: 218.4 bits (555), Expect = 6.8e-54
Identity = 104/119 (87.39%), Postives = 113/119 (94.96%), Query Frame = 1


Query: 1   MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNI 60
           MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHK  LSKEEY+RYS QY+LIK+LN 
Sbjct: 126 MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKPGLSKEEYDRYSHQYELIKELNA 185

Query: 61  VYEHEPNNFNKIVELMQKMQECGQPPNDIVQELAPDFDLTNLAQLSPEMLESQTNCCIM 120
           VYE++P+NF KIVELMQKMQECGQPPNDIVQELAPD +L+NLAQLSPEMLESQ+NCCIM
Sbjct: 186 VYENDPSNFPKIVELMQKMQECGQPPNDIVQELAPDLNLSNLAQLSPEMLESQSNCCIM 244

[Close]

BLAST of Cla005639 vs. NCBI nr
Match: gi|720009439|ref|XP_010258938.1| (PREDICTED: peroxisome biogenesis protein 19-1-like isoform X2 [Nelumbo nucifera])

HSP 1 Score: 218.4 bits (555), Expect = 6.8e-54
Identity = 104/119 (87.39%), Postives = 113/119 (94.96%), Query Frame = 1


Query: 1   MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKASLSKEEYERYSQQYKLIKDLNI 60
           MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHK  LSKEEY+RYS QY+LIK+LN 
Sbjct: 125 MESIVETMMQQLLSKEILHEPMKEIGERYPKWLEDHKPGLSKEEYDRYSHQYELIKELNA 184

Query: 61  VYEHEPNNFNKIVELMQKMQECGQPPNDIVQELAPDFDLTNLAQLSPEMLESQTNCCIM 120
           VYE++P+NF KIVELMQKMQECGQPPNDIVQELAPD +L+NLAQLSPEMLESQ+NCCIM
Sbjct: 185 VYENDPSNFPKIVELMQKMQECGQPPNDIVQELAPDLNLSNLAQLSPEMLESQSNCCIM 243

The following BLAST results are available for this feature:

BLAST of Cla005639 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PE192_ARATH	2.9e-49	73.11	Peroxisome biogenesis protein 19-2 OS=Arabidopsis thaliana GN=PEX19-2 PE=1 SV=1	[more]
PE191_ARATH	5.0e-49	74.79	Peroxisome biogenesis protein 19-1 OS=Arabidopsis thaliana GN=PEX19-1 PE=1 SV=1	[more]
PEX19_RAT	1.6e-15	33.86	Peroxisomal biogenesis factor 19 OS=Rattus norvegicus GN=Pex19 PE=1 SV=1	[more]
PEX19_HUMAN	2.1e-15	35.43	Peroxisomal biogenesis factor 19 OS=Homo sapiens GN=PEX19 PE=1 SV=1	[more]
PEX19_PONAB	2.1e-15	35.43	Peroxisomal biogenesis factor 19 OS=Pongo abelii GN=PEX19 PE=2 SV=1	[more]

BLAST of Cla005639 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L283_CUCSA	3.7e-59	95.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G020030 PE=4 SV=1	[more]
A0A061G438_THECC	1.1e-53	86.55	Peroxin 19-2 OS=Theobroma cacao GN=TCM_015969 PE=4 SV=1	[more]
A0A0B0NAV5_GOSAR	1.8e-53	85.71	Peroxisome biogenesis 19-2-like protein OS=Gossypium arboreum GN=F383_15508 PE=4...	[more]
K4C6Q2_SOLLC	4.0e-53	86.55	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A0D2S2X3_GOSRA	1.2e-52	84.03	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G198700 PE=4 SV=1	[more]

BLAST of Cla005639 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778675391\|ref\|XP_011650400.1\|	5.4e-59	95.80	PREDICTED: peroxisome biogenesis protein 19-2 [Cucumis sativus]	[more]
gi\|659095951\|ref\|XP_008448848.1\|	5.4e-59	95.80	PREDICTED: peroxisome biogenesis protein 19-1-like [Cucumis melo]	[more]
gi\|1009181296\|ref\|XP_015872090.1\|	4.0e-54	86.55	PREDICTED: peroxisome biogenesis protein 19-2-like [Ziziphus jujuba]	[more]
gi\|720009436\|ref\|XP_010258937.1\|	6.8e-54	87.39	PREDICTED: peroxisome biogenesis protein 19-2-like isoform X1 [Nelumbo nucifera]	[more]
gi\|720009439\|ref\|XP_010258938.1\|	6.8e-54	87.39	PREDICTED: peroxisome biogenesis protein 19-1-like isoform X2 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006708	Pex19

Vocabulary: **Cellular Component**
Term	Definition
GO:0005777	peroxisome

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009405	pathogenesis
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0004222	metalloendopeptidase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU12655	watermelon EST collection version 2.0	transcribed_cluster
WMU36781	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU37175	watermelon unigene v2 vs TrEMBL	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla005639	Cla005639.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU37175	WMU37175	transcribed_cluster
WMU36781	WMU36781	transcribed_cluster
WMU12655	WMU12655	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006708	Pex19 protein	PANTHER	PTHR12774	PEROXISOMAL FARNESYLATED PROTEIN	coord: 1..119 score: 1.1
IPR006708	Pex19 protein	PFAM	PF04614	Pex19	coord: 1..107 score: 1.3
None	No IPR available	PANTHER	PTHR12774:SF2	PEROXISOMAL BIOGENESIS FACTOR 19	coord: 1..119 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla005639	Wax gourd	wgowmB012
Cla005639	Wax gourd	wgowmB057
Cla005639	Watermelon (97103) v1	wmwmB049
Cla005639	Cucumber (Gy14) v1	cgywmB547
Cla005639	Cucumber (Gy14) v1	cgywmB585
Cla005639	Cucurbita maxima (Rimu)	cmawmB254
Cla005639	Cucurbita maxima (Rimu)	cmawmB295
Cla005639	Cucurbita maxima (Rimu)	cmawmB553
Cla005639	Cucurbita maxima (Rimu)	cmawmB790
Cla005639	Cucurbita moschata (Rifu)	cmowmB245
Cla005639	Cucurbita moschata (Rifu)	cmowmB288
Cla005639	Cucurbita moschata (Rifu)	cmowmB545
Cla005639	Cucurbita moschata (Rifu)	cmowmB784
Cla005639	Wild cucumber (PI 183967)	cpiwmB195
Cla005639	Wild cucumber (PI 183967)	cpiwmB381
Cla005639	Melon (DHL92) v3.5.1	mewmB452
Cla005639	Watermelon (Charleston Gray)	wcgwmB053
Cla005639	Watermelon (Charleston Gray)	wcgwmB119
Cla005639	Cucumber (Chinese Long) v2	cuwmB195
Cla005639	Cucumber (Chinese Long) v2	cuwmB375
Cla005639	Cucurbita pepo (Zucchini)	cpewmB205
Cla005639	Cucurbita pepo (Zucchini)	cpewmB828
Cla005639	Bottle gourd (USVL1VR-Ls)	lsiwmB008
Cla005639	Bottle gourd (USVL1VR-Ls)	lsiwmB428
Cla005639	Cucumber (Gy14) v2	cgybwmB184
Cla005639	Cucumber (Gy14) v2	cgybwmB348
Cla005639	Melon (DHL92) v3.6.1	medwmB004
Cla005639	Melon (DHL92) v3.6.1	medwmB433
Cla005639	Silver-seed gourd	carwmB0414
Cla005639	Silver-seed gourd	carwmB0526
Cla005639	Cucumber (Chinese Long) v3	cucwmB205
Cla005639	Cucumber (Chinese Long) v3	cucwmB398
Cla005639	Watermelon (97103) v2	wmwmbB050
Cla005639	Watermelon (97103) v2	wmwmbB053