Cla005631 (gene) Watermelon (97103) v1

Overview
NameCla005631
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPentatricopeptide repeat-containing protein (AHRD V1 ***- D7MP46_ARALL); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
LocationChr10 : 2806527 .. 2808305 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAGACCCTTCTCTAACAAAGCACTATTATACCTTCAAACACAAAATTCCCTGCTTCAAAAATCTGCCACCACAATCGCAATTCACAGTCCTTGCAATTTTCAGCCATGTTTCTCAATCGATGACCAAGCTCCATGGACCACCCCCCGAATGGCTCTTGCCGAGTTGGCTCTAGCCGAGGCCTTTCAGGCGCTCAAATGCAACCCAAATGGCTACACTCTAGTTCAACTGGTTCGAGCCTGCGCCAGCCACGCCTGGGTTTCCTGTGGCCACCAGCTTCACAGCTACATTTTGCGATCTGGGTTTGCCTCTAATGTCTTCGTGGGCACAGCCATGGTCAATTTCTATTTAAAAACTGAGTCCTTTCATAGTGCACATAAGGTGTTTGATGAAATGCCTCGACCGAATTTGGTTTCTTGGAACTCCTTGATTTCTGGTTATGTGCATTGTGGCCATTTTCGCAAGGCTTTATCTTTGTTTATTCAGCTTGATGGGTCTGAAAATCTTGTGGACTCATATTCTTTGTCTACGGCTTTGAGTGCCTCTAGTCAGCTGGGTTGGCTAATATTGGGTCAGTCGATCCATTCAAAAGTTTTAAAGCTTGGGCTGGAAGAAAATACCATTGTTGCTAATTGTTTGATTGACATGTATGGAAAATGCAAGTCTTTTGAAGAGGCAGTTAAAGTGTTTAATGACATGATCGATAAGGATACAATTTCATGGAATTCAGTAATTGCAGCCAGTGCTAAAAATGGAAGGCTAGAACAGGCGTCGAGATATTTGCAACTGATGCCTCGACCTGATACTATATCATATAACGAACTGATAAATGGTTATGCTCAATTTGGAGATATTGGAGATGCTGTAGAAATTCTATCAAAGATGGATAGCCCAAACTCTTCATCTTGGAATGCAGTGTTAACAGGATATGTTGATAGGGATGAAGCATGGAAAGCTTTGAGTTTCTTCACTAAGATGCACTCGTGCGACATCAGGATGGATCAATTCACATTTTCAAGCATTTTAAGTGGTGTTGCAGGGCTCTCCGCGTTGAAATGGGGTTTGGCAATCCATTGTTGCATAACTAAATGTGGTTTAGATACATCAACTGTTGTTGGCAGCGCCCTAATCGATATGTACTCCAAATGTGGGCGTGTGAACTATGCTGAAATGATGTTTCAGTCATTGCCCAAGAAGAACTTGGTATCTTGGAATTCAATGATCTCAGGTTTTGCTCACAATGGCAAAACAATGGAAGTGATTGATCTTTTCGAGAAGCTAAAGAAGATGAAAGATATAAAACCTGATAACATCACATTTCTCAACATTCTACTATCATGTTCAGATAACCAGGTCCCGTTGGAGGTCACAATGCAGTTCTTTAAATCAATGGTTGAGGATTATGGTATCAGACCAACTATTGAGCATTGTTGTACTATGGTTAGGCTAATGGGACAAAGAGGGGATGCATATAGAAGTAAGAGGCTGATACATGAATTAGGGTTTGATTCGAGCGGATCGGTTTGGCGAGCTCTTCTGGGTGCTTGTGGCACTTCGAAGGATTTGAAACTGGCAAAGGTAGCAGCTGCAAAAGCAGTAGTATTGGGGGCTGCTGATGATTATGTACATGTTATGATGTCTAATATATTCGCATCTCATGGAAAATGGAGAGATGTGAAAGAAGTTAGGGAACTTATGAGAAAGAATGGGGTTAGAAAAGAAACTGGATATAGTTGGTTGATTGAAATGGAAAATGAAAATTCTTCATCAAACTAG

mRNA sequence

ATGCAAAGACCCTTCTCTAACAAAGCACTATTATACCTTCAAACACAAAATTCCCTGCTTCAAAAATCTGCCACCACAATCGCAATTCACAGTCCTTGCAATTTTCAGCCATGTTTCTCAATCGATGACCAAGCTCCATGGACCACCCCCCGAATGGCTCTTGCCGAGTTGGCTCTAGCCGAGGCCTTTCAGGCGCTCAAATGCAACCCAAATGGCTACACTCTAGTTCAACTGGTTCGAGCCTGCGCCAGCCACGCCTGGGTTTCCTGTGGCCACCAGCTTCACAGCTACATTTTGCGATCTGGGTTTGCCTCTAATGTCTTCGTGGGCACAGCCATGGTCAATTTCTATTTAAAAACTGAGTCCTTTCATAGTGCACATAAGGTGTTTGATGAAATGCCTCGACCGAATTTGGTTTCTTGGAACTCCTTGATTTCTGGTTATGTGCATTGTGGCCATTTTCGCAAGGCTTTATCTTTGTTTATTCAGCTTGATGGGTCTGAAAATCTTGTGGACTCATATTCTTTGTCTACGGCTTTGAGTGCCTCTAGTCAGCTGGGTTGGCTAATATTGGGTCAGTCGATCCATTCAAAAGTTTTAAAGCTTGGGCTGGAAGAAAATACCATTGTTGCTAATTGTTTGATTGACATGTATGGAAAATGCAAGTCTTTTGAAGAGGCAGTTAAAGTGTTTAATGACATGATCGATAAGGATACAATTTCATGGAATTCAGTAATTGCAGCCAGTGCTAAAAATGGAAGGCTAGAACAGGCGTCGAGATATTTGCAACTGATGCCTCGACCTGATACTATATCATATAACGAACTGATAAATGGTTATGCTCAATTTGGAGATATTGGAGATGCTGTAGAAATTCTATCAAAGATGGATAGCCCAAACTCTTCATCTTGGAATGCAGTGTTAACAGGATATGTTGATAGGGATGAAGCATGGAAAGCTTTGAGTTTCTTCACTAAGATGCACTCGTGCGACATCAGGATGGATCAATTCACATTTTCAAGCATTTTAAGTGGTGTTGCAGGGCTCTCCGCGTTGAAATGGGGTTTGGCAATCCATTGTTGCATAACTAAATGTGGTTTAGATACATCAACTGTTGTTGGCAGCGCCCTAATCGATATGTACTCCAAATGTGGGCGTGTGAACTATGCTGAAATGATGTTTCAGTCATTGCCCAAGAAGAACTTGGTATCTTGGAATTCAATGATCTCAGGTTTTGCTCACAATGGCAAAACAATGGAAGTGATTGATCTTTTCGAGAAGCTAAAGAAGATGAAAGATATAAAACCTGATAACATCACATTTCTCAACATTCTACTATCATGTTCAGATAACCAGGTCCCGTTGGAGGTCACAATGCAGTTCTTTAAATCAATGGTTGAGGATTATGGTATCAGACCAACTATTGAGCATTGTTGTACTATGGTTAGGCTAATGGGACAAAGAGGGGATGCATATAGAAGTAAGAGGCTGATACATGAATTAGGGTTTGATTCGAGCGGATCGGTTTGGCGAGCTCTTCTGGGTGCTTGTGGCACTTCGAAGGATTTGAAACTGGCAAAGGTAGCAGCTGCAAAAGCAGTAGTATTGGGGGCTGCTGATGATTATGTACATGTTATGATGTCTAATATATTCGCATCTCATGGAAAATGGAGAGATGTGAAAGAAGTTAGGGAACTTATGAGAAAGAATGGGGTTAGAAAAGAAACTGGATATAGTTGGTTGATTGAAATGGAAAATGAAAATTCTTCATCAAACTAG

Coding sequence (CDS)

ATGCAAAGACCCTTCTCTAACAAAGCACTATTATACCTTCAAACACAAAATTCCCTGCTTCAAAAATCTGCCACCACAATCGCAATTCACAGTCCTTGCAATTTTCAGCCATGTTTCTCAATCGATGACCAAGCTCCATGGACCACCCCCCGAATGGCTCTTGCCGAGTTGGCTCTAGCCGAGGCCTTTCAGGCGCTCAAATGCAACCCAAATGGCTACACTCTAGTTCAACTGGTTCGAGCCTGCGCCAGCCACGCCTGGGTTTCCTGTGGCCACCAGCTTCACAGCTACATTTTGCGATCTGGGTTTGCCTCTAATGTCTTCGTGGGCACAGCCATGGTCAATTTCTATTTAAAAACTGAGTCCTTTCATAGTGCACATAAGGTGTTTGATGAAATGCCTCGACCGAATTTGGTTTCTTGGAACTCCTTGATTTCTGGTTATGTGCATTGTGGCCATTTTCGCAAGGCTTTATCTTTGTTTATTCAGCTTGATGGGTCTGAAAATCTTGTGGACTCATATTCTTTGTCTACGGCTTTGAGTGCCTCTAGTCAGCTGGGTTGGCTAATATTGGGTCAGTCGATCCATTCAAAAGTTTTAAAGCTTGGGCTGGAAGAAAATACCATTGTTGCTAATTGTTTGATTGACATGTATGGAAAATGCAAGTCTTTTGAAGAGGCAGTTAAAGTGTTTAATGACATGATCGATAAGGATACAATTTCATGGAATTCAGTAATTGCAGCCAGTGCTAAAAATGGAAGGCTAGAACAGGCGTCGAGATATTTGCAACTGATGCCTCGACCTGATACTATATCATATAACGAACTGATAAATGGTTATGCTCAATTTGGAGATATTGGAGATGCTGTAGAAATTCTATCAAAGATGGATAGCCCAAACTCTTCATCTTGGAATGCAGTGTTAACAGGATATGTTGATAGGGATGAAGCATGGAAAGCTTTGAGTTTCTTCACTAAGATGCACTCGTGCGACATCAGGATGGATCAATTCACATTTTCAAGCATTTTAAGTGGTGTTGCAGGGCTCTCCGCGTTGAAATGGGGTTTGGCAATCCATTGTTGCATAACTAAATGTGGTTTAGATACATCAACTGTTGTTGGCAGCGCCCTAATCGATATGTACTCCAAATGTGGGCGTGTGAACTATGCTGAAATGATGTTTCAGTCATTGCCCAAGAAGAACTTGGTATCTTGGAATTCAATGATCTCAGGTTTTGCTCACAATGGCAAAACAATGGAAGTGATTGATCTTTTCGAGAAGCTAAAGAAGATGAAAGATATAAAACCTGATAACATCACATTTCTCAACATTCTACTATCATGTTCAGATAACCAGGTCCCGTTGGAGGTCACAATGCAGTTCTTTAAATCAATGGTTGAGGATTATGGTATCAGACCAACTATTGAGCATTGTTGTACTATGGTTAGGCTAATGGGACAAAGAGGGGATGCATATAGAAGTAAGAGGCTGATACATGAATTAGGGTTTGATTCGAGCGGATCGGTTTGGCGAGCTCTTCTGGGTGCTTGTGGCACTTCGAAGGATTTGAAACTGGCAAAGGTAGCAGCTGCAAAAGCAGTAGTATTGGGGGCTGCTGATGATTATGTACATGTTATGATGTCTAATATATTCGCATCTCATGGAAAATGGAGAGATGTGAAAGAAGTTAGGGAACTTATGAGAAAGAATGGGGTTAGAAAAGAAACTGGATATAGTTGGTTGATTGAAATGGAAAATGAAAATTCTTCATCAAACTAG

Protein sequence

MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAPWTTPRMALAELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAVVLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMENENSSSN
Homology
[Close]
BLAST of Cla005631 vs. Swiss-Prot
Match: PP423_ARATH (Putative pentatricopeptide repeat-containing protein At5g47460 OS=Arabidopsis thaliana GN=PCMP-E103 PE=3 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 6.8e-155
Identity = 250/515 (48.54%), Postives = 368/515 (71.46%), Query Frame = 1 

Query: 70  PNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKV 129
           P+   LV L+R   ++ +VS   QLH Y+ + GF SN  +  +++ FY  ++S   AHKV
Sbjct: 53  PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKV 112

Query: 130 FDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWL 189
           FDEMP P+++SWNSL+SGYV  G F++ + LF++L  S+   + +S + AL+A ++L   
Sbjct: 113 FDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLS 172

Query: 190 ILGQSIHSKVLKLGLEE-NTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAA 249
            LG  IHSK++KLGLE+ N +V NCLIDMYGKC   ++AV VF  M +KDT+SWN+++A+
Sbjct: 173 PLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVAS 232

Query: 250 SAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVL 309
            ++NG+LE    +   MP PDT++YNELI+ + + GD  +A ++LS M +PNSSSWN +L
Sbjct: 233 CSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTIL 292

Query: 310 TGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLD 369
           TGYV+ +++ +A  FFTKMHS  +R D+++ S +L+ VA L+ + WG  IH C  K GLD
Sbjct: 293 TGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLD 352

Query: 370 TSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKL 429
           +  VV SALIDMYSKCG + +AE+MF ++P+KNL+ WN MISG+A NG ++E I LF +L
Sbjct: 353 SRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQL 412

Query: 430 KKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVRLMGQR 489
           K+ + +KPD  TFLN+L  CS  +VP+EV + +F+ M+ +Y I+P++EHCC+++R MGQR
Sbjct: 413 KQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQR 472

Query: 490 GDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAVVLGAA--DDYVHVM 549
           G+ +++K++I E GF   G  WRALLGAC   KDLK AK  AAK + LG A  D+Y++++
Sbjct: 473 GEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIV 532

Query: 550 MSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWL 582
           MSN++A H +WR+V ++R++MR++GV KE G SW+
Sbjct: 533 MSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567


HSP 2 Score: 86.7 bits (213), Expect = 9.6e-16
Identity = 72/298 (24.16%), Postives = 132/298 (44.30%), Query Frame = 1 

Query: 140 SWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHSKV 199
           SW++++      G     L   ++L       D+  L   L  S   G++ L + +H  V
Sbjct: 23  SWSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 82

Query: 200 LKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAASAKNGRLEQA- 259
            K G   NT ++N L+  Y    S E+A KVF++M D D ISWNS+++   ++GR ++  
Sbjct: 83  TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 142

Query: 260 SRYLQLMPR---PDTISYNELINGYAQ--FGDIGDAVE---ILSKMDSPNSSSWNAVLTG 319
             +L+L      P+  S+   +   A+     +G  +    +   ++  N    N ++  
Sbjct: 143 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 202

Query: 320 YVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTS 379
           Y        A+  F  M       D  ++++I++  +    L+ GL     +     +  
Sbjct: 203 YGKCGFMDDAVLVFQHME----EKDTVSWNAIVASCSRNGKLELGLWFFHQMP----NPD 262

Query: 380 TVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKL 429
           TV  + LID + K G  N A  +   +P  N  SWN++++G+ ++ K+ E  + F K+
Sbjct: 263 TVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKM 311

[Close]
BLAST of Cla005631 vs. Swiss-Prot
Match: PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.0e-78
Identity = 170/535 (31.78%), Postives = 283/535 (52.90%), Query Frame = 1 

Query: 91  GHQLHSYILRSGFAS-NVFVGTAMVNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYV 150
           G ++H +++ +G     V +G  +VN Y K  S   A +VF  M   + VSWNS+I+G  
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391

Query: 151 HCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTI 210
             G F +A+  +  +   + L  S++L ++LS+ + L W  LGQ IH + LKLG++ N  
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 451

Query: 211 VANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAASAK------------------ 270
           V+N L+ +Y +     E  K+F+ M + D +SWNS+I A A+                  
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511

Query: 271 --------------------NGRLEQASRYLQLMPR--PDTISYNELINGYAQFGDIGDA 330
                                G L +    L L      +  + N LI  Y + G++   
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGC 571

Query: 331 VEILSKM-DSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAG 390
            +I S+M +  ++ +WN++++GY+  +   KAL     M     R+D F ++++LS  A 
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631

Query: 391 LSALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSM 450
           ++ L+ G+ +H C  +  L++  VVGSAL+DMYSKCGR++YA   F ++P +N  SWNSM
Sbjct: 632 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 691

Query: 451 ISGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVED 510
           ISG+A +G+  E + LFE +K      PD++TF+ +L +CS   + LE   + F+SM + 
Sbjct: 692 ISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGL-LEEGFKHFESMSDS 751

Query: 511 YGIRPTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGAC--GTSKDLKLA 570
           YG+ P IEH   M  ++G+ G+  + +  I ++    +  +WR +LGAC     +  +L 
Sbjct: 752 YGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELG 811

Query: 571 KVAAAKAVVLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWL 582
           K AA     L   +   +V++ N++A+ G+W D+ + R+ M+   V+KE GYSW+
Sbjct: 812 KKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865


HSP 2 Score: 114.0 bits (284), Expect = 5.6e-24
Identity = 114/433 (26.33%), Postives = 177/433 (40.88%), Query Frame = 1 

Query: 71  NGYTLVQLVRACASHAWVSC--GHQLHSYILRSGFASNVFVGTAMVNFYLKT-ESFHSAH 130
           N Y  V ++RAC     V    G Q+H  + +  +A +  V   +++ Y K   S   A 
Sbjct: 101 NQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYAL 160

Query: 131 KVFDEMPRPNLVSWNSLISGYVHCGHFRKA------------------------------ 190
             F ++   N VSWNS+IS Y   G  R A                              
Sbjct: 161 CAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLT 220

Query: 191 -------LSLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIV 250
                    +   +  S  L D +  S  +SA ++ G L    S   KV       N + 
Sbjct: 221 EPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL----SYARKVFNQMETRNAVT 280

Query: 251 ANCLIDMYGKCKSFEEAVKVF---NDMIDKDTISWNSVIAASAKNGRLEQASRYLQLMPR 310
            N L+    + K  EEA K+F   N MID    S+  ++++  +    E+          
Sbjct: 281 LNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVH 340

Query: 311 PDTISY----------NELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVLTGYVDRDEA 370
              I+           N L+N YA+ G I DA  +   M   +S SWN+++TG       
Sbjct: 341 GHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCF 400

Query: 371 WKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSAL 430
            +A+  +  M   DI    FT  S LS  A L   K G  IH    K G+D +  V +AL
Sbjct: 401 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNAL 460

Query: 431 IDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTM-EVIDLFEKLKKMKDIKP 450
           + +Y++ G +N    +F S+P+ + VSWNS+I   A + +++ E +  F   ++    K 
Sbjct: 461 MTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ-KL 520


HSP 3 Score: 111.7 bits (278), Expect = 2.8e-23
Identity = 75/256 (29.30%), Postives = 126/256 (49.22%), Query Frame = 1 

Query: 43  DQAPWTTPRMALA--ELALAEAF------QALKCNPNGYTLVQLVRACASHAWVSCGHQL 102
           DQ  W +   ALA  E +L EA       Q      N  T   ++ A +S ++   G Q+
Sbjct: 480 DQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI 539

Query: 103 HSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKVFDEMP-RPNLVSWNSLISGYVHCGH 162
           H   L++  A       A++  Y K        K+F  M  R + V+WNS+ISGY+H   
Sbjct: 540 HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNEL 599

Query: 163 FRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANC 222
             KAL L   +  +   +DS+  +T LSA + +  L  G  +H+  ++  LE + +V + 
Sbjct: 600 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 659

Query: 223 LIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAASAKNGRLEQASRYLQLM-----PRP 282
           L+DMY KC   + A++ FN M  +++ SWNS+I+  A++G+ E+A +  + M       P
Sbjct: 660 LVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPP 719

Query: 283 DTISYNELINGYAQFG 285
           D +++  +++  +  G
Sbjct: 720 DHVTFVGVLSACSHAG 735


HSP 4 Score: 102.1 bits (253), Expect = 2.2e-20
Identity = 63/209 (30.14%), Postives = 102/209 (48.80%), Query Frame = 1 

Query: 76  VQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKVFDEMPR 135
           +  V++C  H         HS + ++    +V++   ++N YL+T    SA KVFDEMP 
Sbjct: 7   LSFVQSCVGHR--GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 66

Query: 136 PNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLG--WLILGQ 195
            N VSW  ++SGY   G  ++AL     +       + Y+  + L A  ++G   ++ G+
Sbjct: 67  RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 126

Query: 196 SIHSKVLKLGLEENTIVANCLIDMYGKC-KSFEEAVKVFNDMIDKDTISWNSVIAASAKN 255
            IH  + KL    + +V+N LI MY KC  S   A+  F D+  K+++SWNS+I+  ++ 
Sbjct: 127 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 186

Query: 256 GRLEQASRYLQLM----PRPDTISYNELI 278
           G    A R    M     RP   ++  L+
Sbjct: 187 GDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213


HSP 5 Score: 98.6 bits (244), Expect = 2.4e-19
Identity = 103/406 (25.37%), Postives = 183/406 (45.07%), Query Frame = 1 

Query: 70  PNGYTLVQLVRACAS--HAWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAH 129
           P  YT   LV    S     V    Q+   I +SG  +++FVG+ +V+ + K+ S   A 
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263

Query: 130 KVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGS-----ENLVDSYSLSTALSA 189
           KVF++M   N V+ N L+ G V      +A  LF+ ++       E+ V   S     S 
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSL 323

Query: 190 SSQLGWLILGQSIHSKVLKLGLEENTI-VANCLIDMYGKCKSFEEAVKVFNDMIDKDTIS 249
           + ++G L  G+ +H  V+  GL +  + + N L++MY KC S  +A +VF  M DKD++S
Sbjct: 324 AEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 383

Query: 250 WNSVIAASAKNGRLEQASRYLQLMPRPDTISYN-ELINGYA-----QFGDIGDAV--EIL 309
           WNS+I    +NG   +A    + M R D +  +  LI+  +     ++  +G  +  E L
Sbjct: 384 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 443

Query: 310 SKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALK 369
                 N S  NA++T Y +     +    F+ M       DQ +++SI+ G    S   
Sbjct: 444 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP----EHDQVSWNSII-GALARSERS 503

Query: 370 WGLAIHCCIT--KCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNL----VSWNS 429
              A+ C +   + G   + +  S+++   S        + +     K N+     + N+
Sbjct: 504 LPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENA 563

Query: 430 MISGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQV 454
           +I+ +   G+    +D  EK+      + DN+T+ +++     N++
Sbjct: 564 LIACYGKCGE----MDGCEKIFSRMAERRDNVTWNSMISGYIHNEL 599


HSP 6 Score: 41.2 bits (95), Expect = 4.6e-02
Identity = 23/96 (23.96%), Postives = 49/96 (51.04%), Query Frame = 1 

Query: 196 HSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAASAKNGRL 255
           HS++ K  L+++  + N LI+ Y +      A KVF++M  ++ +SW  +++  ++NG  
Sbjct: 24  HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83

Query: 256 EQASRYLQLMPRPDTIS----YNELINGYAQFGDIG 288
           ++A  +L+ M +    S    +  ++    + G +G
Sbjct: 84  KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVG 119

[Close]
BLAST of Cla005631 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.2e-76
Identity = 166/558 (29.75%), Postives = 296/558 (53.05%), Query Frame = 1 

Query: 70  PNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKV 129
           P  Y    L++ C   A +  G ++H  +++SGF+ ++F  T + N Y K    + A KV
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192

Query: 130 FDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY-SLSTALSASSQLGW 189
           FD MP  +LVSWN++++GY   G  R AL + ++    ENL  S+ ++ + L A S L  
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEM-VKSMCEENLKPSFITIVSVLPAVSALRL 252

Query: 190 LILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAA 249
           + +G+ IH   ++ G +    ++  L+DMY KC S E A ++F+ M++++ +SWNS+I A
Sbjct: 253 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 312

Query: 250 SAKNGRLEQA----SRYLQLMPRPDTISY------------------------------- 309
             +N   ++A     + L    +P  +S                                
Sbjct: 313 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 372

Query: 310 ----NELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHS 369
               N LI+ Y +  ++  A  +  K+ S    SWNA++ G+        AL++F++M S
Sbjct: 373 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 432

Query: 370 CDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNY 429
             ++ D FT+ S+++ +A LS       IH  + +  LD +  V +AL+DMY+KCG +  
Sbjct: 433 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 492

Query: 430 AEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCS 489
           A ++F  + ++++ +WN+MI G+  +G     ++LFE+++K   IKP+ +TFL+++ +CS
Sbjct: 493 ARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK-GTIKPNGVTFLSVISACS 552

Query: 490 DNQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSV 549
            + + +E  ++ F  M E+Y I  +++H   MV L+G+ G    +   I ++    + +V
Sbjct: 553 HSGL-VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 612

Query: 550 WRALLGACGTSKDLKLAKVAAAKAVVLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRK 588
           + A+LGAC   K++  A+ AA +   L   D   HV+++NI+ +   W  V +VR  M +
Sbjct: 613 YGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLR 672


HSP 2 Score: 132.1 bits (331), Expect = 2.0e-29
Identity = 109/470 (23.19%), Postives = 205/470 (43.62%), Query Frame = 1 

Query: 93  QLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCG 152
           Q+   + ++G     F  T +V+ + +  S   A +VF+ +     V +++++ G+    
Sbjct: 55  QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVS 114

Query: 153 HFRKALSLFIQL--DGSENLVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIV 212
              KAL  F+++  D  E +V  Y+ +  L        L +G+ IH  ++K G   +   
Sbjct: 115 DLDKALQFFVRMRYDDVEPVV--YNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFA 174

Query: 213 ANCLIDMYGKCKSFEEAVKVFN---------------------------DMI-----DKD 272
              L +MY KC+   EA KVF+                           +M+     +  
Sbjct: 175 MTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENL 234

Query: 273 TISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELIN-------GYAQFGDIGDAVE 332
             S+ ++++       L   S   ++        ++ L+N        YA+ G +  A +
Sbjct: 235 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQ 294

Query: 333 ILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSA 392
           +   M   N  SWN+++  YV  +   +A+  F KM    ++    +    L   A L  
Sbjct: 295 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 354

Query: 393 LKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISG 452
           L+ G  IH    + GLD +  V ++LI MY KC  V+ A  MF  L  + LVSWN+MI G
Sbjct: 355 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 414

Query: 453 FAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVT--MQFFKSMVEDY 512
           FA NG+ ++ ++ F +++  + +KPD  T+++++ + ++    L +T   ++   +V   
Sbjct: 415 FAQNGRPIDALNYFSQMRS-RTVKPDTFTYVSVITAIAE----LSITHHAKWIHGVVMRS 474

Query: 513 GIRPTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGT 520
            +   +     +V +  + G A    RLI ++  +   + W A++   GT
Sbjct: 475 CLDKNVFVTTALVDMYAKCG-AIMIARLIFDMMSERHVTTWNAMIDGYGT 516

[Close]
BLAST of Cla005631 vs. Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.4e-75
Identity = 168/518 (32.43%), Postives = 273/518 (52.70%), Query Frame = 1 

Query: 71  NGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKVF 130
           N Y+   ++ AC+    ++ G Q+HS I +S F S+V++G+A+V+ Y K  + + A +VF
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF 210

Query: 131 DEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLI 190
           DEM   N+VSWNSLI+ +   G   +AL +F  +  S    D  +L++ +SA + L  + 
Sbjct: 211 DEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK 270

Query: 191 LGQSIHSKVLKLG-LEENTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAAS 250
           +GQ +H +V+K   L  + I++N  +DMY KC   +EA  +F+ M               
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM--------------- 330

Query: 251 AKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVLT 310
                           P  + I+   +I+GYA       A  + +KM   N  SWNA++ 
Sbjct: 331 ----------------PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 390

Query: 311 GYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGL-- 370
           GY    E  +ALS F  +    +    ++F++IL   A L+ L  G+  H  + K G   
Sbjct: 391 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 450

Query: 371 ----DTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVID 430
               +    VG++LIDMY KCG V    ++F+ + +++ VSWN+MI GFA NG   E ++
Sbjct: 451 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 510

Query: 431 LFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVR 490
           LF ++ +  + KPD+IT + +L +C      +E    +F SM  D+G+ P  +H   MV 
Sbjct: 511 LFREMLESGE-KPDHITMIGVLSACGHAGF-VEEGRHYFSSMTRDFGVAPLRDHYTCMVD 570

Query: 491 LMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAVVLGAADDYV 550
           L+G+ G    +K +I E+       +W +LL AC   +++ L K  A K + +  ++   
Sbjct: 571 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGP 630

Query: 551 HVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWL 582
           +V++SN++A  GKW DV  VR+ MRK GV K+ G SW+
Sbjct: 631 YVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 635


HSP 2 Score: 160.2 bits (404), Expect = 6.8e-38
Identity = 88/292 (30.14%), Postives = 149/292 (51.03%), Query Frame = 1 

Query: 158 LSLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDM 217
           LS F        L+DS  + + LSA       I  + +H+ V+K G      + N LID 
Sbjct: 13  LSSFTDSSPFAKLLDS-CIKSKLSA-------IYVRYVHASVIKSGFSNEIFIQNRLIDA 72

Query: 218 YGKCKSFEEAVKVFNDMIDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELI 277
           Y KC S E+  +VF+ M  ++  +WNSV+    K G L++A    + MP  D        
Sbjct: 73  YSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERD-------- 132

Query: 278 NGYAQFGDIGDAVEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQF 337
                                    +WN++++G+   D   +AL +F  MH     ++++
Sbjct: 133 -----------------------QCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEY 192

Query: 338 TFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSL 397
           +F+S+LS  +GL+ +  G+ +H  I K    +   +GSAL+DMYSKCG VN A+ +F  +
Sbjct: 193 SFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM 252

Query: 398 PKKNLVSWNSMISGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCS 450
             +N+VSWNS+I+ F  NG  +E +D+F+ + + + ++PD +T  +++ +C+
Sbjct: 253 GDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESR-VEPDEVTLASVISACA 264


HSP 3 Score: 129.8 bits (325), Expect = 9.9e-29
Identity = 92/345 (26.67%), Postives = 156/345 (45.22%), Query Frame = 1 

Query: 94  LHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGH 153
           +H+ +++SGF++ +F+   +++ Y K  S     +VFD+MP+ N+ +WNS+++G    G 
Sbjct: 42  VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101

Query: 154 FRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANC 213
             +A SLF                 ++    Q  W       +S V      +    A C
Sbjct: 102 LDEADSLF----------------RSMPERDQCTW-------NSMVSGFAQHDRCEEALC 161

Query: 214 LIDMYGK---------CKSFEEAVKVFNDMIDKDTISWNSVIAASAKNGRLEQASRYLQL 273
              M  K           S   A    NDM     +  +S+IA S           +L  
Sbjct: 162 YFAMMHKEGFVLNEYSFASVLSACSGLNDM--NKGVQVHSLIAKSP----------FLS- 221

Query: 274 MPRPDTISYNELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFF 333
               D    + L++ Y++ G++ DA  +  +M   N  SWN+++T +     A +AL  F
Sbjct: 222 ----DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVF 281

Query: 334 TKMHSCDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCG-LDTSTVVGSALIDMYSK 393
             M    +  D+ T +S++S  A LSA+K G  +H  + K   L    ++ +A +DMY+K
Sbjct: 282 QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAK 341

Query: 394 CGRVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKL 429
           C R+  A  +F S+P +N+++  SMISG+A    T     +F K+
Sbjct: 342 CSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM 346


HSP 4 Score: 118.6 bits (296), Expect = 2.3e-25
Identity = 86/350 (24.57%), Postives = 158/350 (45.14%), Query Frame = 1 

Query: 106 NVFVGTAMVNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLD 165
           N++   ++V    K      A  +F  MP  +  +WNS++SG+       +AL  F  + 
Sbjct: 85  NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144

Query: 166 GSENLVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFE 225
               +++ YS ++ LSA S L  +  G  +HS + K     +  + + L+DMY KC +  
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204

Query: 226 EAVKVFNDMIDKDTISWNSVIAASAKNGRLEQASRYLQLM----PRPDTISYNELINGYA 285
           +A +VF++M D++ +SWNS+I    +NG   +A    Q+M      PD ++   +I+  A
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264

Query: 286 QFGDIGDAVEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCD-IRMDQFTFS 345
               I    E+  ++   +    + +L+            +F      C  I+  +F F 
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSN-----------AFVDMYAKCSRIKEARFIFD 324

Query: 346 SILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKK 405
           S+                   I     +TS + G A+    +K  R+ + +M  +++   
Sbjct: 325 SM------------------PIRNVIAETSMISGYAMA-ASTKAARLMFTKMAERNVVS- 384

Query: 406 NLVSWNSMISGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSD 451
               WN++I+G+  NG+  E + LF  LK+ + + P + +F NIL +C+D
Sbjct: 385 ----WNALIAGYTQNGENEEALSLFCLLKR-ESVCPTHYSFANILKACAD 398


HSP 5 Score: 97.4 bits (241), Expect = 5.4e-19
Identity = 86/397 (21.66%), Postives = 170/397 (42.82%), Query Frame = 1 

Query: 94  LHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGH 153
           +H+ +++SGF++ +F+                                N LI  Y  CG 
Sbjct: 42  VHASVIKSGFSNEIFIQ-------------------------------NRLIDAYSKCGS 101

Query: 154 FRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANC 213
                 +F ++    N+   Y+ ++ ++  ++LG+L    S+   +     E +    N 
Sbjct: 102 LEDGRQVFDKMP-QRNI---YTWNSVVTGLTKLGFLDEADSLFRSMP----ERDQCTWNS 161

Query: 214 LIDMYGKCKSFEEAVKVFNDMIDKDTI----SWNSVIAASAKNGRLEQASRYLQLMPRPD 273
           ++  + +    EEA+  F  M  +  +    S+ SV++A +    + +  +   L+ +  
Sbjct: 162 MVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 221

Query: 274 TISY----NELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFT 333
            +S     + L++ Y++ G++ DA  +  +M   N  SWN+++T +     A +AL  F 
Sbjct: 222 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQ 281

Query: 334 KMHSCDIRMDQFTFSSILSGVAGLSALK--------------------WGLAIHCCITKC 393
            M    +  D+ T +S++S  A LSA+K                       A      KC
Sbjct: 282 MMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKC 341

Query: 394 G--------LDT----STVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFA 451
                     D+    + +  +++I  Y+       A +MF  + ++N+VSWN++I+G+ 
Sbjct: 342 SRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYT 398


HSP 6 Score: 47.0 bits (110), Expect = 8.4e-04
Identity = 32/141 (22.70%), Postives = 72/141 (51.06%), Query Frame = 1 

Query: 375 SALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKLKKMKDI 434
           ++++   +K G ++ A+ +F+S+P+++  +WNSM+SGFA + +  E +  F  + K +  
Sbjct: 90  NSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK-EGF 149

Query: 435 KPDNITFLNILLSCSD-NQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVRLMGQRGDAYR 494
             +  +F ++L +CS  N +   V +    S++        +     +V +  + G+   
Sbjct: 150 VLNEYSFASVLSACSGLNDMNKGVQVH---SLIAKSPFLSDVYIGSALVDMYSKCGNVND 209

Query: 495 SKRLIHELGFDSSGSVWRALL 515
           ++R+  E+G D +   W +L+
Sbjct: 210 AQRVFDEMG-DRNVVSWNSLI 225

[Close]
BLAST of Cla005631 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.1e-75
Identity = 167/530 (31.51%), Postives = 280/530 (52.83%), Query Frame = 1 

Query: 50  PRMALAELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFV 109
           P   L+  A  +     +C PN YT   L++A A  + +S G  LH   ++S   S+VFV
Sbjct: 109 PDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFV 168

Query: 110 GTAMVNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSEN 169
             ++++ Y       SA KVF  +   ++VSWNS+I+G+V  G   KAL LF +++  + 
Sbjct: 169 ANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV 228

Query: 170 LVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVK 229
                ++   LSA +++  L  G+ + S + +  +  N  +AN ++DMY KC S E+A +
Sbjct: 229 KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 288

Query: 230 VFNDMIDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDA 289
           +F+ M +KD ++W +++   A +   E A   L  MP+ D +++N LI+ Y Q G   +A
Sbjct: 289 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348

Query: 290 VEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGL 349
           + +  ++    +                              ++++Q T  S LS  A +
Sbjct: 349 LIVFHELQLQKN------------------------------MKLNQITLVSTLSACAQV 408

Query: 350 SALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMI 409
            AL+ G  IH  I K G+  +  V SALI MYSKCG +  +  +F S+ K+++  W++MI
Sbjct: 409 GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMI 468

Query: 410 SGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDY 469
            G A +G   E +D+F K+++  ++KP+ +TF N+  +CS   + ++     F  M  +Y
Sbjct: 469 GGLAMHGCGNEAVDMFYKMQEA-NVKPNGVTFTNVFCACSHTGL-VDEAESLFHQMESNY 528

Query: 470 GIRPTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVA 529
           GI P  +H   +V ++G+ G   ++ + I  +    S SVW ALLGAC    +L LA++A
Sbjct: 529 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 588

Query: 530 AAKAVVLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYS 580
             + + L   +D  HV++SNI+A  GKW +V E+R+ MR  G++KE G S
Sbjct: 589 CTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 606


HSP 2 Score: 120.9 bits (302), Expect = 4.6e-26
Identity = 93/386 (24.09%), Postives = 173/386 (44.82%), Query Frame = 1 

Query: 172 DSYSLST--ALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVK 231
           D YS S   A++A S    L   + +  ++ K     N+   N LI  Y        ++ 
Sbjct: 61  DPYSASKLFAMAALSSFASLEYARKVFDEIPK----PNSFAWNTLIRAYASGPDPVLSIW 120

Query: 232 VFNDMI-------DKDTISWNSVIAASAKNGRLEQASRYLQLMPR--PDTISYNELINGY 291
            F DM+       +K T  +    AA   +  L Q+   + +      D    N LI+ Y
Sbjct: 121 AFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCY 180

Query: 292 AQFGDIGDAVEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFS 351
              GD+  A ++ + +   +  SWN+++ G+V +    KAL  F KM S D++    T  
Sbjct: 181 FSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMV 240

Query: 352 SILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQ----- 411
            +LS  A +  L++G  +   I +  ++ +  + +A++DMY+KCG +  A+ +F      
Sbjct: 241 GVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK 300

Query: 412 --------------------------SLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKLK 471
                                     S+P+K++V+WN++IS +  NGK  E + +F +L+
Sbjct: 301 DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQ 360

Query: 472 KMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVRLMGQRG 516
             K++K + IT ++ L +C+  QV      ++  S ++ +GIR        ++ +  + G
Sbjct: 361 LQKNMKLNQITLVSTLSACA--QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCG 420


HSP 3 Score: 101.3 bits (251), Expect = 3.8e-20
Identity = 97/403 (24.07%), Postives = 169/403 (41.94%), Query Frame = 1 

Query: 76  VQLVRACASHAWVSCGHQLHSYILRSGF------ASNVFVGTAMVNFYLKTESFHSAHKV 135
           + L+  C S   +    Q H +++R+G       AS +F   A+ +F     S   A KV
Sbjct: 34  ISLIERCVSLRQLK---QTHGHMIRTGTFSDPYSASKLFAMAALSSF----ASLEYARKV 93

Query: 136 FDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLD---GSENLVDSYSLSTALSASSQL 195
           FDE+P+PN  +WN+LI  Y         LS++  LD    S+   + Y+    + A++++
Sbjct: 94  FDEIPKPNSFAWNTLIRAYASGPD--PVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEV 153

Query: 196 GWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVI 255
             L LGQS+H   +K  +  +  VAN LI  Y  C   + A KVF  + +KD +SWNS  
Sbjct: 154 SSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS-- 213

Query: 256 AASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILSKMDSPNSSSWNA 315
                                        +ING+ Q G    A+E+  KM+S +  + + 
Sbjct: 214 -----------------------------MINGFVQKGSPDKALELFKKMESEDVKASHV 273

Query: 316 VLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCG 375
            + G +      + L F  ++ S  I  ++   +  L+            A+    TKCG
Sbjct: 274 TMVGVLSACAKIRNLEFGRQVCSY-IEENRVNVNLTLAN-----------AMLDMYTKCG 333

Query: 376 LDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVIDLFE 435
                               +  A+ +F ++ +K+ V+W +M+ G+A       + + +E
Sbjct: 334 S-------------------IEDAKRLFDAMEEKDNVTWTTMLDGYA-------ISEDYE 358

Query: 436 KLKKMKDIKPD-NITFLNILLSC-SDNQVPLEVTMQFFKSMVE 468
             +++ +  P  +I   N L+S    N  P E  + F +  ++
Sbjct: 394 AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQ 358

[Close]
BLAST of Cla005631 vs. TrEMBL
Match: A0A0A0L6U8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G019960 PE=4 SV=1)

HSP 1 Score: 1015.0 bits (2623), Expect = 3.7e-293
Identity = 506/593 (85.33%), Postives = 536/593 (90.39%), Query Frame = 1 

Query: 1   MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAPWTTPRMALA----- 60
           MQRPFS K +L       LLQK +  I+IH+  NFQPCFSIDDQAP T  R ALA     
Sbjct: 1   MQRPFSTKLVL-----KPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHT 60

Query: 61  -ELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMV 120
            +LALAEAF+ALKCNPNGY LVQLVRAC SHA  SCGHQLHSYILRSGFASNVFVGTAMV
Sbjct: 61  ADLALAEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY 180
           NFY+KTESF SAHK+FDEMP+P+LV+WNSLISGYVHCG FRKAL LFIQLDGS NLVDSY
Sbjct: 121 NFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSY 180

Query: 181 SLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDM 240
           SLS ALSAS  LGWLILGQSIHSKV+KLGLE++T+VANCLIDMYGKC+SFE AV+VFNDM
Sbjct: 181 SLSIALSASGHLGWLILGQSIHSKVIKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDM 240

Query: 241 IDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILS 300
           I KDTISWNSVIAASA+NGRLEQASRYLQ MPRPDTIS+NELINGYAQFGDI  AVEILS
Sbjct: 241 IGKDTISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKW 360
           KMDSPNSSSWNAVLTGYVDRDE W+ALSFFTKMHSCD+RMDQFTFSSILSGVAGLSALKW
Sbjct: 301 KMDSPNSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAH 420
           GLAIHCCITKCGLDTSTVVGSALI MYSKCG VNYAEM+FQSLPKKNLVSWN+MISG AH
Sbjct: 361 GLAIHCCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAH 420

Query: 421 NGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPT 480
           NGKTMEVI LFEKLK  KD+KPDNITFLNILLSCSDNQVPLE TMQ++KSMVEDYGI+PT
Sbjct: 421 NGKTMEVIHLFEKLKMTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPT 480

Query: 481 IEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAV 540
           IEHCCTMVRLMGQRGD Y SKRLIHELGFDSSG VWRALLGACG  +DLKLAKVAAAK +
Sbjct: 481 IEHCCTMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVI 540

Query: 541 VLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMENE 588
           VLGAADDYV+VMMSNIFASHGKWRDVK VRELMR  GVRKETGYSWLIEMENE
Sbjct: 541 VLGAADDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENE 588

[Close]
BLAST of Cla005631 vs. TrEMBL
Match: D7U3N6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0229g00070 PE=4 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 1.3e-197
Identity = 350/597 (58.63%), Postives = 446/597 (74.71%), Query Frame = 1 

Query: 1   MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAP---WTTPRMALA-- 60
           MQR FS      LQ QN    +S   I  HS  N     S   +     W+    AL   
Sbjct: 1   MQRSFSELVQKCLQNQN----QSHQLILRHSHANHVHRISPQKEGESEAWSNLTWALTQG 60

Query: 61  ----ELALAEAFQALKCN--PNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFV 120
               E+AL+EA   +     PN Y L+ LVRA  +   +  G QLHSYILRSGF SNVFV
Sbjct: 61  GNRTEIALSEASGVINSGTKPNAYALLHLVRASTNLGLIPFGQQLHSYILRSGFGSNVFV 120

Query: 121 GTAMVNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSEN 180
            TA++NFY++ ES   AH VF E+P P++VSWNSLISGY H G FR AL LF++L+ S+ 
Sbjct: 121 STALLNFYIRIESLKDAHNVFVEIPEPSVVSWNSLISGYAHAGQFRAALGLFLKLERSDI 180

Query: 181 LVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVK 240
             D++S + AL+    L  L LG+SIHSK++K GLE + +VANCL+DMYGKC   +EA++
Sbjct: 181 CADAFSFTAALATCGHLSLLRLGESIHSKIVKSGLEWSVVVANCLVDMYGKCGYVQEAIR 240

Query: 241 VFNDMIDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDA 300
           VF+ +IDKD ISWN+VI+ASA+N +LEQA  YL+ MP PDTISYNELING AQFG+I DA
Sbjct: 241 VFDSIIDKDIISWNTVISASARNRKLEQAFSYLRQMPEPDTISYNELINGIAQFGNIEDA 300

Query: 301 VEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGL 360
           ++ILS M SPNSSSWN+++TGYV+RD +W+AL FF+KM S DI MD+FTFSSILSG+AGL
Sbjct: 301 IQILSSMPSPNSSSWNSIITGYVNRDLSWEALDFFSKMQSKDIEMDRFTFSSILSGIAGL 360

Query: 361 SALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMI 420
           +ALKWG+ IHCC  KCGLD S VVGSALIDMYSKCG+V  AEM+FQSLP+KNLV+WN+MI
Sbjct: 361 AALKWGVLIHCCTIKCGLDESIVVGSALIDMYSKCGQVKNAEMLFQSLPRKNLVTWNAMI 420

Query: 421 SGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDY 480
           SGFAHNG   EVI LF++LK  +D+KPD ITFLN+LL+CS NQ+PL+V +Q+F+SM++D+
Sbjct: 421 SGFAHNGNFTEVIKLFKQLKTERDLKPDGITFLNVLLACSHNQIPLQVAIQYFESMIKDH 480

Query: 481 GIRPTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVA 540
           GI PT EHCC+M+RLMGQRG+ +R++R+I+ELGF S G VWR+LLGACG   DL +A+VA
Sbjct: 481 GIEPTAEHCCSMIRLMGQRGEVWRAERMIYELGFSSCGLVWRSLLGACGACGDLDVAEVA 540

Query: 541 AAKAVVLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMEN 587
           AA+ + L   +++V+VMMSN++A +GKW DV  VR+LMR+ GVRK  G SW IE+EN
Sbjct: 541 AAQVIELEGHNEFVYVMMSNMYACYGKWGDVSVVRKLMRERGVRKGAGCSW-IEVEN 592

[Close]
BLAST of Cla005631 vs. TrEMBL
Match: A5AIF3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013509 PE=4 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 2.8e-195
Identity = 331/533 (62.10%), Postives = 424/533 (79.55%), Query Frame = 1 

Query: 56  ELALAEAFQALKCN--PNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAM 115
           E+AL+EA   +     PN Y L+ LVRA  +   +  G QLHSYILRSGF SNVFV TA+
Sbjct: 85  EIALSEASGVINSGTKPNAYALLHLVRASTNLGLIPFGQQLHSYILRSGFGSNVFVSTAL 144

Query: 116 VNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDS 175
           +NFY++ ES   AH VF E+P P++VSWNSLISGY H G FR AL LF++L+ S+   D+
Sbjct: 145 LNFYIRIESLKDAHNVFVEIPEPSVVSWNSLISGYAHAGQFRAALGLFLKLERSDICADA 204

Query: 176 YSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFND 235
           +S + AL+    L  L LG+SIHSK++K GLE + +VANCL+DMYGKC   +EA++VF+ 
Sbjct: 205 FSFTAALATCGHLSLLRLGESIHSKIVKSGLEWSVVVANCLVDMYGKCGYVQEAIRVFDS 264

Query: 236 MIDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEIL 295
           +IDKD ISWN+VI+ASA+N +LEQA  YL+ MP PDTISYNELING AQFG+  DA++IL
Sbjct: 265 IIDKDIISWNTVISASARNRKLEQAFSYLRQMPEPDTISYNELINGIAQFGNXEDAIQIL 324

Query: 296 SKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALK 355
           S M SPNSSSWN+++TGYV+RD +W+AL FF+KM S DI MD+FTFSSILSG+AGL+ALK
Sbjct: 325 SSMPSPNSSSWNSIITGYVNRDLSWEALDFFSKMQSKDIEMDRFTFSSILSGIAGLAALK 384

Query: 356 WGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFA 415
           WG+ IHCC  KCGLD S VVGSALIDMYSKCG+V  AEM+FQSLP+KNLV+WN+MISGFA
Sbjct: 385 WGVLIHCCTIKCGLDESIVVGSALIDMYSKCGQVKNAEMLFQSLPRKNLVTWNAMISGFA 444

Query: 416 HNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRP 475
           HNG   EVI LF++LK  +D+KPD ITFLN+LL+CS NQ+PL+V +Q+F+SM++D+GI P
Sbjct: 445 HNGNFTEVIKLFKQLKTERDLKPDGITFLNVLLACSHNQIPLQVAIQYFESMIKDHGIEP 504

Query: 476 TIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKA 535
           T EHCC+M+RLMGQRG+ +R++R+I+ELGF S G VWR+LLGACG   DL +A+VAAA+ 
Sbjct: 505 TAEHCCSMIRLMGQRGEVWRAERMIYELGFSSCGLVWRSLLGACGACGDLDVAEVAAAQV 564

Query: 536 VVLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMEN 587
           + L   +++V+VMMSN++A +GKW DV  VR+LMR+ GVRK  G SW IE+EN
Sbjct: 565 IELEGHNEFVYVMMSNMYACYGKWGDVSVVRKLMRERGVRKGAGCSW-IEVEN 616

[Close]
BLAST of Cla005631 vs. TrEMBL
Match: A5AIF3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013509 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.3e-08
Identity = 56/234 (23.93%), Postives = 109/234 (46.58%), Query Frame = 1 

Query: 293 LSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSAL 352
           LS+ +S   S+    LT   +R E   ALS  + + +   + + +    ++     L  +
Sbjct: 62  LSEGESEAWSNLTWALTQGGNRTEI--ALSEASGVINSGTKPNAYALLHLVRASTNLGLI 121

Query: 353 KWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGF 412
            +G  +H  I + G  ++  V +AL++ Y +   +  A  +F  +P+ ++VSWNS+ISG+
Sbjct: 122 PFGQQLHSYILRSGFGSNVFVSTALLNFYIRIESLKDAHNVFVEIPEPSVVSWNSLISGY 181

Query: 413 AHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIR 472
           AH G+    + LF KL++  DI  D  +F   L +C    + L    +   S +   G+ 
Sbjct: 182 AHAGQFRAALGLFLKLER-SDICADAFSFTAALATC--GHLSLLRLGESIHSKIVKSGLE 241

Query: 473 PTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLA 527
            ++     +V + G+ G    + R+   +  D     W  ++ A   ++ L+ A
Sbjct: 242 WSVVVANCLVDMYGKCGYVQEAIRVFDSI-IDKDIISWNTVISASARNRKLEQA 289


HSP 2 Score: 632.9 bits (1631), Expect = 4.0e-178
Identity = 307/558 (55.02%), Postives = 409/558 (73.30%), Query Frame = 1 

Query: 43  DQAPWTTPRMALAELALAEAFQALKC--------NPNGYTLVQLVRACASHAWVSCGHQL 102
           D   W     ALA+  L      L           PN Y LV L+R C    W S G QL
Sbjct: 39  DPVSWANTISALAQGGLISDIALLSACLMMNSGSKPNDYALVHLIRTCTKCGWFSLGQQL 98

Query: 103 HSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHF 162
           H  I++SG  SNVFV TA++NFY+K E  + A  +F E+P PNLV WNSLISGYV  G F
Sbjct: 99  HCQIIQSGHDSNVFVSTALINFYVKFELIYEARNLFAEIPEPNLVGWNSLISGYVRSGQF 158

Query: 163 RKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCL 222
           RK+L+LF+QL+ S    DSY+ + ALSA  QL  L  G+ IHSK++KLG+E + IV NCL
Sbjct: 159 RKSLTLFLQLEKSGISADSYTCTAALSACGQLALLQFGKLIHSKIVKLGVEYSVIVGNCL 218

Query: 223 IDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYN 282
           IDMYGKC + EE+++VF++MID+D+ISWNSVIAA+A+NGRLEQA  +L  M  PDTISYN
Sbjct: 219 IDMYGKCGAVEESMRVFDEMIDRDSISWNSVIAANARNGRLEQALSFLHQMTDPDTISYN 278

Query: 283 ELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRM 342
           E+I+G AQFG+I DA+ +LS+M +PNSSSWN+V+T YV+R  A  AL FF+KMH   ++ 
Sbjct: 279 EVISGIAQFGNIEDAIYLLSRMPNPNSSSWNSVITSYVNRYRARDALEFFSKMHFSGVQK 338

Query: 343 DQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMF 402
           DQFT+SSILSG+AGLSA+ WG+ IHCC  K GLD S V+GSALIDMYSKCGR+  AEM+F
Sbjct: 339 DQFTYSSILSGIAGLSAVTWGMLIHCCTVKSGLDGSVVIGSALIDMYSKCGRITEAEMVF 398

Query: 403 QSLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVP 462
             L KKNL++WN+MISG+AHNG + +V+ LFEKL  +K+++PD ITFLN+L +C  N++P
Sbjct: 399 HWLQKKNLITWNTMISGYAHNGDSSKVLRLFEKLMLVKNLQPDRITFLNVLSACWHNRMP 458

Query: 463 LEVTMQFFKSMVEDYGIRPTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALL 522
           L+   ++F+ MV +Y I PT EHC +M+R+MGQ G  Y+++++IH+LGF+S+G+VWRALL
Sbjct: 459 LDAANRYFELMVNEYSINPTAEHCSSMIRIMGQEGKVYQAEKMIHQLGFESNGAVWRALL 518

Query: 523 GACGTSKDLKLAKVAAAKAVVLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRK 582
            AC T  ++K+AKVAA K + L    +YV+V+MSN++A H KWRDV ++R +M++  VRK
Sbjct: 519 AACVTCGNVKMAKVAAEKVMQLEGDSEYVYVLMSNVYARHEKWRDVIQIRTMMKEKEVRK 578

Query: 583 ETGYSWLIEMENENSSSN 593
           E G+SW IE+EN   +S+
Sbjct: 579 EIGHSW-IELENTFPTSS 595

[Close]
BLAST of Cla005631 vs. TrEMBL
Match: A0A061G554_THECC (Pentatricopeptide repeat superfamily protein, putative OS=Theobroma cacao GN=TCM_015957 PE=4 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 1.2e-177
Identity = 317/554 (57.22%), Postives = 410/554 (74.01%), Query Frame = 1 

Query: 47  WTTPRMALAE------LALAEAFQALKCN--PNGYTLVQLVRACASHAWVSCGHQLHSYI 106
           W T    LAE      L L +A + L+    P  Y+LV LVR      + S   QLH YI
Sbjct: 51  WLTLISTLAEGGADMDLTLHKAAKLLRSGIKPYDYSLVHLVRVSTDLDYDSYCQQLHCYI 110

Query: 107 LRSGFASNVFVGTAMVNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKAL 166
           L+SGF SNVFV  A++ FY + +    A K+F E+P+P+++SWN+LISGYV  G FRKAL
Sbjct: 111 LKSGFVSNVFVSNALMRFYRRIDLPCQAGKLFVEIPQPSVISWNTLISGYVQFGQFRKAL 170

Query: 167 SLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMY 226
            LF++L  S+   + YS + AL+A  QLG+L LG+SIHS +LK GLE   IV NCLID Y
Sbjct: 171 GLFLKLQRSDICSNEYSFTVALAACGQLGFLHLGKSIHSNILKFGLECGIIVRNCLIDTY 230

Query: 227 GKCKSFEEAVKVFNDMIDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELIN 286
           GKC + ++AV VF+ MIDKD ISWNSV+AA A+NG+LE+A  + + MP  DTISYNELI+
Sbjct: 231 GKCGAVDDAVLVFHSMIDKDVISWNSVLAACARNGKLEEAFSFWRQMPLRDTISYNELIS 290

Query: 287 GYAQFGDIGDAVEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFT 346
           G AQFG+I DA++IL  M +PNSSSW +++TGYV+R+ A +AL FF+KMHS ++ +D+F+
Sbjct: 291 GIAQFGNINDAIDILFNMPNPNSSSWTSIMTGYVNRNRAREALQFFSKMHSNEVELDEFS 350

Query: 347 FSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLP 406
           FS ILSG+AGLSAL WG+ IHCC  KCGLDTS VVGSALIDMYSKCGRV   E MFQSLP
Sbjct: 351 FSIILSGIAGLSALTWGMLIHCCTIKCGLDTSVVVGSALIDMYSKCGRVKNTESMFQSLP 410

Query: 407 KKNLVSWNSMISGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVT 466
           KKNLV+WN+MISG+AHNG + +VI LFE LK+ +D+KPD ITFLN+L +CS +  PL+  
Sbjct: 411 KKNLVTWNAMISGYAHNGDSTKVIQLFELLKRERDLKPDAITFLNVLAACSHSGTPLQEV 470

Query: 467 MQFFKSMVEDYGIRPTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACG 526
            Q+F+SM+ DYGI+PT+EHCC+M+RLMGQ G+ +R++R+I++L F S   VWRALLGACG
Sbjct: 471 YQYFESMINDYGIKPTVEHCCSMIRLMGQGGEIWRAERMIYDLEFGSCDVVWRALLGACG 530

Query: 527 TSKDLKLAKVAAAKAVVLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGY 586
             KDLK+AK+AAAK + L  ++DY +VMMSNIFA   KW ++  +R+LMR   V KE G 
Sbjct: 531 VCKDLKVAKIAAAKVIELDGSNDYAYVMMSNIFAHFHKWAEMSVMRKLMRDKRVIKEAGC 590

Query: 587 SWLIEMENENSSSN 593
           SW IEMEN   +S+
Sbjct: 591 SW-IEMENVELNSS 603

[Close]
BLAST of Cla005631 vs. NCBI nr
Match: gi|778675366|ref|XP_004147255.2| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g47460 [Cucumis sativus])

HSP 1 Score: 1015.0 bits (2623), Expect = 5.4e-293
Identity = 506/593 (85.33%), Postives = 536/593 (90.39%), Query Frame = 1 

Query: 1   MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAPWTTPRMALA----- 60
           MQRPFS K +L       LLQK +  I+IH+  NFQPCFSIDDQAP T  R ALA     
Sbjct: 1   MQRPFSTKLVL-----KPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHT 60

Query: 61  -ELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMV 120
            +LALAEAF+ALKCNPNGY LVQLVRAC SHA  SCGHQLHSYILRSGFASNVFVGTAMV
Sbjct: 61  ADLALAEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY 180
           NFY+KTESF SAHK+FDEMP+P+LV+WNSLISGYVHCG FRKAL LFIQLDGS NLVDSY
Sbjct: 121 NFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSY 180

Query: 181 SLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDM 240
           SLS ALSAS  LGWLILGQSIHSKV+KLGLE++T+VANCLIDMYGKC+SFE AV+VFNDM
Sbjct: 181 SLSIALSASGHLGWLILGQSIHSKVIKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDM 240

Query: 241 IDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILS 300
           I KDTISWNSVIAASA+NGRLEQASRYLQ MPRPDTIS+NELINGYAQFGDI  AVEILS
Sbjct: 241 IGKDTISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKW 360
           KMDSPNSSSWNAVLTGYVDRDE W+ALSFFTKMHSCD+RMDQFTFSSILSGVAGLSALKW
Sbjct: 301 KMDSPNSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAH 420
           GLAIHCCITKCGLDTSTVVGSALI MYSKCG VNYAEM+FQSLPKKNLVSWN+MISG AH
Sbjct: 361 GLAIHCCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAH 420

Query: 421 NGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPT 480
           NGKTMEVI LFEKLK  KD+KPDNITFLNILLSCSDNQVPLE TMQ++KSMVEDYGI+PT
Sbjct: 421 NGKTMEVIHLFEKLKMTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPT 480

Query: 481 IEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAV 540
           IEHCCTMVRLMGQRGD Y SKRLIHELGFDSSG VWRALLGACG  +DLKLAKVAAAK +
Sbjct: 481 IEHCCTMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVI 540

Query: 541 VLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMENE 588
           VLGAADDYV+VMMSNIFASHGKWRDVK VRELMR  GVRKETGYSWLIEMENE
Sbjct: 541 VLGAADDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENE 588

[Close]
BLAST of Cla005631 vs. NCBI nr
Match: gi|659095933|ref|XP_008448839.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g47460 [Cucumis melo])

HSP 1 Score: 1006.9 bits (2602), Expect = 1.5e-290
Identity = 505/598 (84.45%), Postives = 536/598 (89.63%), Query Frame = 1 

Query: 1   MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAPWTTPRMALA----- 60
           MQRPFS K +L       LLQK +  I+IH+  NFQPCFS+DDQAP T  R ALA     
Sbjct: 1   MQRPFSTKLVL-----KPLLQKPSAIISIHNASNFQPCFSVDDQAPSTALRTALAGGGHT 60

Query: 61  -ELALAEAFQALKCNPNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAMV 120
            ELALAEAF+ALKCNPNGY LVQLVRAC SHAW SCGHQLHSYILRSGFASNVFVGTAMV
Sbjct: 61  AELALAEAFRALKCNPNGYALVQLVRACTSHAWDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDSY 180
           NFY+KTESF SAHK+FDEMP+P+LV+WNSLISGYV CG FRKAL LFIQLDGSENLVDSY
Sbjct: 121 NFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVRCGQFRKALCLFIQLDGSENLVDSY 180

Query: 181 SLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFNDM 240
           SLS ALSAS  LGWLILGQSIHSKV+KLGLE+NT+VANCLIDMYGKC+SFE AV+VFNDM
Sbjct: 181 SLSIALSASGHLGWLILGQSIHSKVVKLGLEDNTVVANCLIDMYGKCESFEGAVEVFNDM 240

Query: 241 IDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEILS 300
           I KDTISWNSVIAASA+N RLEQASRYLQLMPRPDTIS+NELINGYAQFGDI  AVEILS
Sbjct: 241 IGKDTISWNSVIAASARNRRLEQASRYLQLMPRPDTISFNELINGYAQFGDIEYAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALKW 360
           KMDSPNSSSWNAVLTGYVDRDE WKALSFFTKMHSCD+ MDQFTFSSILSGVAGLSAL+W
Sbjct: 301 KMDSPNSSSWNAVLTGYVDRDETWKALSFFTKMHSCDVGMDQFTFSSILSGVAGLSALEW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFAH 420
           GLAIHCCITKCGLDTSTVVGSALI+MYSKCG VN AE++FQSLPKKNLVSWN+MISG AH
Sbjct: 361 GLAIHCCITKCGLDTSTVVGSALINMYSKCGHVNSAEIIFQSLPKKNLVSWNAMISGLAH 420

Query: 421 NGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRPT 480
           NGKTMEVI LFEKLKK KD+KPDNITFL IL SCSDNQVPLE TMQ FKSMVEDYGI+PT
Sbjct: 421 NGKTMEVIRLFEKLKKTKDVKPDNITFLYILPSCSDNQVPLEATMQCFKSMVEDYGIKPT 480

Query: 481 IEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKAV 540
           IEHCCTMVRLMGQRGD + SKRLIHELGFDSSGSVWRALLGACG  +DLKLAKVAAAK +
Sbjct: 481 IEHCCTMVRLMGQRGDVHGSKRLIHELGFDSSGSVWRALLGACGVLRDLKLAKVAAAKVI 540

Query: 541 VLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMENENSSSN 593
           VLGAADDYV+VM+SNIFASHGKWRDVK VRELM K G RKETGYSWLIEMENE   SN
Sbjct: 541 VLGAADDYVYVMLSNIFASHGKWRDVKLVRELMSKKGFRKETGYSWLIEMENEIFLSN 593

[Close]
BLAST of Cla005631 vs. NCBI nr
Match: gi|359495958|ref|XP_003635122.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g47460 [Vitis vinifera])

HSP 1 Score: 697.6 bits (1799), Expect = 1.9e-197
Identity = 350/597 (58.63%), Postives = 446/597 (74.71%), Query Frame = 1 

Query: 1   MQRPFSNKALLYLQTQNSLLQKSATTIAIHSPCNFQPCFSIDDQAP---WTTPRMALA-- 60
           MQR FS      LQ QN    +S   I  HS  N     S   +     W+    AL   
Sbjct: 1   MQRSFSELVQKCLQNQN----QSHQLILRHSHANHVHRISPQKEGESEAWSNLTWALTQG 60

Query: 61  ----ELALAEAFQALKCN--PNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFV 120
               E+AL+EA   +     PN Y L+ LVRA  +   +  G QLHSYILRSGF SNVFV
Sbjct: 61  GNRTEIALSEASGVINSGTKPNAYALLHLVRASTNLGLIPFGQQLHSYILRSGFGSNVFV 120

Query: 121 GTAMVNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSEN 180
            TA++NFY++ ES   AH VF E+P P++VSWNSLISGY H G FR AL LF++L+ S+ 
Sbjct: 121 STALLNFYIRIESLKDAHNVFVEIPEPSVVSWNSLISGYAHAGQFRAALGLFLKLERSDI 180

Query: 181 LVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVK 240
             D++S + AL+    L  L LG+SIHSK++K GLE + +VANCL+DMYGKC   +EA++
Sbjct: 181 CADAFSFTAALATCGHLSLLRLGESIHSKIVKSGLEWSVVVANCLVDMYGKCGYVQEAIR 240

Query: 241 VFNDMIDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDA 300
           VF+ +IDKD ISWN+VI+ASA+N +LEQA  YL+ MP PDTISYNELING AQFG+I DA
Sbjct: 241 VFDSIIDKDIISWNTVISASARNRKLEQAFSYLRQMPEPDTISYNELINGIAQFGNIEDA 300

Query: 301 VEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGL 360
           ++ILS M SPNSSSWN+++TGYV+RD +W+AL FF+KM S DI MD+FTFSSILSG+AGL
Sbjct: 301 IQILSSMPSPNSSSWNSIITGYVNRDLSWEALDFFSKMQSKDIEMDRFTFSSILSGIAGL 360

Query: 361 SALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMI 420
           +ALKWG+ IHCC  KCGLD S VVGSALIDMYSKCG+V  AEM+FQSLP+KNLV+WN+MI
Sbjct: 361 AALKWGVLIHCCTIKCGLDESIVVGSALIDMYSKCGQVKNAEMLFQSLPRKNLVTWNAMI 420

Query: 421 SGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDY 480
           SGFAHNG   EVI LF++LK  +D+KPD ITFLN+LL+CS NQ+PL+V +Q+F+SM++D+
Sbjct: 421 SGFAHNGNFTEVIKLFKQLKTERDLKPDGITFLNVLLACSHNQIPLQVAIQYFESMIKDH 480

Query: 481 GIRPTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVA 540
           GI PT EHCC+M+RLMGQRG+ +R++R+I+ELGF S G VWR+LLGACG   DL +A+VA
Sbjct: 481 GIEPTAEHCCSMIRLMGQRGEVWRAERMIYELGFSSCGLVWRSLLGACGACGDLDVAEVA 540

Query: 541 AAKAVVLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMEN 587
           AA+ + L   +++V+VMMSN++A +GKW DV  VR+LMR+ GVRK  G SW IE+EN
Sbjct: 541 AAQVIELEGHNEFVYVMMSNMYACYGKWGDVSVVRKLMRERGVRKGAGCSW-IEVEN 592

[Close]
BLAST of Cla005631 vs. NCBI nr
Match: gi|147773503|emb|CAN66782.1| (hypothetical protein VITISV_013509 [Vitis vinifera])

HSP 1 Score: 689.9 bits (1779), Expect = 3.9e-195
Identity = 331/533 (62.10%), Postives = 424/533 (79.55%), Query Frame = 1 

Query: 56  ELALAEAFQALKCN--PNGYTLVQLVRACASHAWVSCGHQLHSYILRSGFASNVFVGTAM 115
           E+AL+EA   +     PN Y L+ LVRA  +   +  G QLHSYILRSGF SNVFV TA+
Sbjct: 85  EIALSEASGVINSGTKPNAYALLHLVRASTNLGLIPFGQQLHSYILRSGFGSNVFVSTAL 144

Query: 116 VNFYLKTESFHSAHKVFDEMPRPNLVSWNSLISGYVHCGHFRKALSLFIQLDGSENLVDS 175
           +NFY++ ES   AH VF E+P P++VSWNSLISGY H G FR AL LF++L+ S+   D+
Sbjct: 145 LNFYIRIESLKDAHNVFVEIPEPSVVSWNSLISGYAHAGQFRAALGLFLKLERSDICADA 204

Query: 176 YSLSTALSASSQLGWLILGQSIHSKVLKLGLEENTIVANCLIDMYGKCKSFEEAVKVFND 235
           +S + AL+    L  L LG+SIHSK++K GLE + +VANCL+DMYGKC   +EA++VF+ 
Sbjct: 205 FSFTAALATCGHLSLLRLGESIHSKIVKSGLEWSVVVANCLVDMYGKCGYVQEAIRVFDS 264

Query: 236 MIDKDTISWNSVIAASAKNGRLEQASRYLQLMPRPDTISYNELINGYAQFGDIGDAVEIL 295
           +IDKD ISWN+VI+ASA+N +LEQA  YL+ MP PDTISYNELING AQFG+  DA++IL
Sbjct: 265 IIDKDIISWNTVISASARNRKLEQAFSYLRQMPEPDTISYNELINGIAQFGNXEDAIQIL 324

Query: 296 SKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSALK 355
           S M SPNSSSWN+++TGYV+RD +W+AL FF+KM S DI MD+FTFSSILSG+AGL+ALK
Sbjct: 325 SSMPSPNSSSWNSIITGYVNRDLSWEALDFFSKMQSKDIEMDRFTFSSILSGIAGLAALK 384

Query: 356 WGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGFA 415
           WG+ IHCC  KCGLD S VVGSALIDMYSKCG+V  AEM+FQSLP+KNLV+WN+MISGFA
Sbjct: 385 WGVLIHCCTIKCGLDESIVVGSALIDMYSKCGQVKNAEMLFQSLPRKNLVTWNAMISGFA 444

Query: 416 HNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIRP 475
           HNG   EVI LF++LK  +D+KPD ITFLN+LL+CS NQ+PL+V +Q+F+SM++D+GI P
Sbjct: 445 HNGNFTEVIKLFKQLKTERDLKPDGITFLNVLLACSHNQIPLQVAIQYFESMIKDHGIEP 504

Query: 476 TIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLAKVAAAKA 535
           T EHCC+M+RLMGQRG+ +R++R+I+ELGF S G VWR+LLGACG   DL +A+VAAA+ 
Sbjct: 505 TAEHCCSMIRLMGQRGEVWRAERMIYELGFSSCGLVWRSLLGACGACGDLDVAEVAAAQV 564

Query: 536 VVLGAADDYVHVMMSNIFASHGKWRDVKEVRELMRKNGVRKETGYSWLIEMEN 587
           + L   +++V+VMMSN++A +GKW DV  VR+LMR+ GVRK  G SW IE+EN
Sbjct: 565 IELEGHNEFVYVMMSNMYACYGKWGDVSVVRKLMRERGVRKGAGCSW-IEVEN 616

[Close]
BLAST of Cla005631 vs. NCBI nr
Match: gi|147773503|emb|CAN66782.1| (hypothetical protein VITISV_013509 [Vitis vinifera])

HSP 1 Score: 68.9 bits (167), Expect = 3.3e-08
Identity = 56/234 (23.93%), Postives = 109/234 (46.58%), Query Frame = 1 

Query: 293 LSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCDIRMDQFTFSSILSGVAGLSAL 352
           LS+ +S   S+    LT   +R E   ALS  + + +   + + +    ++     L  +
Sbjct: 62  LSEGESEAWSNLTWALTQGGNRTEI--ALSEASGVINSGTKPNAYALLHLVRASTNLGLI 121

Query: 353 KWGLAIHCCITKCGLDTSTVVGSALIDMYSKCGRVNYAEMMFQSLPKKNLVSWNSMISGF 412
            +G  +H  I + G  ++  V +AL++ Y +   +  A  +F  +P+ ++VSWNS+ISG+
Sbjct: 122 PFGQQLHSYILRSGFGSNVFVSTALLNFYIRIESLKDAHNVFVEIPEPSVVSWNSLISGY 181

Query: 413 AHNGKTMEVIDLFEKLKKMKDIKPDNITFLNILLSCSDNQVPLEVTMQFFKSMVEDYGIR 472
           AH G+    + LF KL++  DI  D  +F   L +C    + L    +   S +   G+ 
Sbjct: 182 AHAGQFRAALGLFLKLER-SDICADAFSFTAALATC--GHLSLLRLGESIHSKIVKSGLE 241

Query: 473 PTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDSSGSVWRALLGACGTSKDLKLA 527
            ++     +V + G+ G    + R+   +  D     W  ++ A   ++ L+ A
Sbjct: 242 WSVVVANCLVDMYGKCGYVQEAIRVFDSI-IDKDIISWNTVISASARNRKLEQA 289


HSP 2 Score: 679.9 bits (1753), Expect = 4.1e-192
Identity = 336/566 (59.36%), Postives = 433/566 (76.50%), Query Frame = 1 

Query: 34  NFQPCFSIDDQAPWTTPRMALA------ELALAEAFQALKCN--PNGYTLVQLVRACASH 93
           NF     ++    W +  + LA      E AL EA   L     PNGY LVQ+VRA A+ 
Sbjct: 37  NFTAIPHVETSDAWASIILDLAQCGTRTEHALFEASHMLSSGTRPNGYLLVQMVRASANL 96

Query: 94  AWVSCGHQLHSYILRSGFASNVFVGTAMVNFYLKTESFHSAHKVFDEMPRPNLVSWNSLI 153
            W  CG QLH+YILRSGF SNVFV TA++NFY++  S  +AHKVFDE+P+P++VSWNSLI
Sbjct: 97  GWDFCGLQLHTYILRSGFRSNVFVSTALINFYVRISSLSNAHKVFDEIPQPSVVSWNSLI 156

Query: 154 SGYVHCGHFRKALSLFIQLDGSENLVDSYSLSTALSASSQLGWLILGQSIHSKVLKLGLE 213
           SGY H G++ KALSLF+QL+ S    DSYSL+ AL A  QL +L LG+S+HSK +KLGL+
Sbjct: 157 SGYAHSGNYSKALSLFLQLERSGVSADSYSLTAALGACGQLRFLQLGKSVHSKTVKLGLQ 216

Query: 214 ENTIVANCLIDMYGKCKSFEEAVKVFNDMIDKDTISWNSVIAASAKNGRLEQASRYLQLM 273
           ++T+V NCLIDMYGKC   +EA  VFN+MI++DTISWNSVIAASA+NG LEQA  +LQ M
Sbjct: 217 DSTVVLNCLIDMYGKCGLLQEANLVFNNMIERDTISWNSVIAASARNGSLEQAFSFLQQM 276

Query: 274 PRPDTISYNELINGYAQFGDIGDAVEILSKMDSPNSSSWNAVLTGYVDRDEAWKALSFFT 333
             PD ISYNE+ING+++FGDI DA+E+L  M +PNSSSWN+++TGYV+R  A +AL FF 
Sbjct: 277 DDPDIISYNEMINGFSRFGDIEDAIELLLSMPNPNSSSWNSIITGYVNRGRAREALDFFC 336

Query: 334 KMHSCDIRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALIDMYSKCG 393
           KM   ++ MDQFTFSSILSGVAG+SAL WG+ IHCC  K GL TS VVGSALIDMYSKCG
Sbjct: 337 KMQMENVEMDQFTFSSILSGVAGISALTWGMLIHCCTIKYGLATSVVVGSALIDMYSKCG 396

Query: 394 RVNYAEMMFQSLPKKNLVSWNSMISGFAHNGKTMEVIDLFEKLKKMKDIKPDNITFLNIL 453
           +V+ AEM+F  LP+KNLV+WN+MISGF+ NG   +V+  FE++K+ +D+KPD ITFLN++
Sbjct: 397 KVSDAEMIFHLLPEKNLVTWNAMISGFSRNGNPSQVMLFFEQMKRERDVKPDEITFLNVI 456

Query: 454 LSCSDNQVPLEVTMQFFKSMVEDYGIRPTIEHCCTMVRLMGQRGDAYRSKRLIHELGFDS 513
            +CS NQ+P E  +QFF+SM+ +YGI+PT+EHCC+M+RLMGQRG+ +R+++LI +LGF +
Sbjct: 457 SACSHNQIPFESALQFFESMIGEYGIKPTLEHCCSMIRLMGQRGEVWRAEKLIFQLGFGA 516

Query: 514 SGSVWRALLGACGTSKDLKLAKVAAAKAVVLGAADDYVHVMMSNIFASHGKWRDVKEVRE 573
            GSVWRAL+GACG  +DL +AK AAAK + L   D+YV+V MSN++A + KW DV+ VR 
Sbjct: 517 CGSVWRALVGACGDCRDLMVAKYAAAKVIQLEGDDEYVYVKMSNLYAHYAKWEDVRVVR- 576

Query: 574 LMRKNGVRKETGYSWLIEMENENSSS 592
            M+  G+RKE GYSW IEMEN  S+S
Sbjct: 577 -MKAKGMRKEAGYSW-IEMENVISNS 599

The following BLAST results are available for this feature:
BLAST of Cla005631 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP423_ARATH6.8e-15548.54Putative pentatricopeptide repeat-containing protein At5g47460 OS=Arabidopsis th... [more]
PP373_ARATH3.0e-7831.78Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis th... [more]
PPR32_ARATH2.2e-7629.75Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
PP151_ARATH1.4e-7532.43Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... [more]
PP175_ARATH3.1e-7531.51Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
BLAST of Cla005631 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6U8_CUCSA3.7e-29385.33Uncharacterized protein OS=Cucumis sativus GN=Csa_3G019960 PE=4 SV=1[more]
D7U3N6_VITVI1.3e-19758.63Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0229g00070 PE=4 SV=... [more]
A5AIF3_VITVI2.8e-19562.10Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013509 PE=4 SV=1[more]
A5AIF3_VITVI2.3e-0823.93Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013509 PE=4 SV=1[more]
A0A061G554_THECC1.2e-17757.22Pentatricopeptide repeat superfamily protein, putative OS=Theobroma cacao GN=TCM... [more]
BLAST of Cla005631 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778675366|ref|XP_004147255.2|5.4e-29385.33PREDICTED: putative pentatricopeptide repeat-containing protein At5g47460 [Cucum... [more]
gi|659095933|ref|XP_008448839.1|1.5e-29084.45PREDICTED: putative pentatricopeptide repeat-containing protein At5g47460 [Cucum... [more]
gi|359495958|ref|XP_003635122.1|1.9e-19758.63PREDICTED: putative pentatricopeptide repeat-containing protein At5g47460 [Vitis... [more]
gi|147773503|emb|CAN66782.1|3.9e-19562.10hypothetical protein VITISV_013509 [Vitis vinifera][more]
gi|147773503|emb|CAN66782.1|3.3e-0823.93hypothetical protein VITISV_013509 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005631Cla005631.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 139..163
score: 2.1E-6coord: 303..331
score: 0.015coord: 240..266
score: 0.0029coord: 547..572
score: 0.46coord: 212..237
score: 2.2E-5coord: 111..135
score:
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 267..296
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 400..445
score: 9.1
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 212..238
score: 3.7E-6coord: 271..297
score: 0.0013coord: 139..161
score: 8.6E-5coord: 403..437
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 370..400
score: 7.048coord: 437..473
score: 5.678coord: 335..369
score: 5.141coord: 106..136
score: 6.697coord: 172..206
score: 5.634coord: 540..574
score: 8.089coord: 242..268
score: 5.207coord: 137..167
score: 9.284coord: 401..431
score: 9.854coord: 71..105
score: 5.941coord: 269..303
score: 9.942coord: 207..241
score: 9.547coord: 304..334
score: 5
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 202..329
score: 3.9E-7coord: 140..164
score: 3.9E-7coord: 56..87
score: 3.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 70..581
score:
NoneNo IPR availablePANTHERPTHR24015:SF855SUBFAMILY NOT NAMEDcoord: 70..581
score:

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla005631Cla97C10G187170Watermelon (97103) v2wmwmbB053
Cla005631Csa3G019960Cucumber (Chinese Long) v2cuwmB195
Cla005631ClCG10G002610Watermelon (Charleston Gray)wcgwmB053
Cla005631CSPI03G02610Wild cucumber (PI 183967)cpiwmB195
Cla005631CmaCh16G011330Cucurbita maxima (Rimu)cmawmB295
Cla005631CmoCh16G011850Cucurbita moschata (Rifu)cmowmB288
Cla005631Lsi07G012880Bottle gourd (USVL1VR-Ls)lsiwmB428
Cla005631Cp4.1LG14g09410Cucurbita pepo (Zucchini)cpewmB205
Cla005631CsGy3G002540Cucumber (Gy14) v2cgybwmB184
Cla005631MELO3C032264.2Melon (DHL92) v3.6.1medwmB433
Cla005631CsaV3_3G002640Cucumber (Chinese Long) v3cucwmB205
Cla005631Bhi11G000148Wax gourdwgowmB012
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla005631Cucumber (Gy14) v1cgywmB585
Cla005631Cucurbita maxima (Rimu)cmawmB254
Cla005631Cucurbita maxima (Rimu)cmawmB790
Cla005631Cucurbita moschata (Rifu)cmowmB245
Cla005631Cucurbita moschata (Rifu)cmowmB784
Cla005631Wild cucumber (PI 183967)cpiwmB381
Cla005631Melon (DHL92) v3.5.1mewmB452
Cla005631Watermelon (Charleston Gray)wcgwmB119
Cla005631Cucurbita pepo (Zucchini)cpewmB828
Cla005631Bottle gourd (USVL1VR-Ls)lsiwmB008
Cla005631Cucumber (Gy14) v2cgybwmB348
Cla005631Melon (DHL92) v3.6.1medwmB004
Cla005631Silver-seed gourdcarwmB0414
Cla005631Silver-seed gourdcarwmB0526
Cla005631Cucumber (Chinese Long) v3cucwmB398
Cla005631Watermelon (97103) v2wmwmbB050