Cla005608 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTTTGTGCTTATCTTTTAGGGTTTGCGCTACCACTTATGCTCTTCCCATGATATGTTCAACTTCGAATACTGGGTTGGTAATCTCCAATGTCTAGATGTTTGCTGATTATCGAGCCATTATGTGGTTTGTGAAGAAACATTTAACGTGTAGGTGACTGAAGAATATCAGGCGGTGAATGTCTCTGTGAAAATTGATGTCTTTAGATCTGAGGTAAGAGTTCGAGATTTCTTTTCATGAATAATGCTTTCTGATAACTTTGCTTCTTATCATTATACTTATCATTTCAATTAAACGGAACATTTGGTGCCTTAATGCCTGGTTAGACTCAAAGCCATTTCAAATTCTACATTGAATGAATTTGTCTTTCTTGGATTAGTTCTGTACTGAAATAAAAAAGAGTCAGAAAATCTTTCTCAGCTTTTGGCTGTCTTCTAAAGATCCAACGATCTCTTCCACATTGGATGAATTTTGCTGCCTTGAAATAATGCTTTACTGAAACCGATGACACTCAAAATCCTTCTCACCTACAATCGGTCTGCTCTTCAGATAAGGCTTTTCTTAACTGAGACGAGAGTGATCTGGCAGTGTAGCAACTACTTGTCAGTTGTCTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCATATCCTTCACATTGTTTCTTTCCTCTCGTCTGTTGCTCATTTTGTTTCTTTACTCATTCATCCTAGCTGTTGTGACTTGTCAATGGTGTTTTGTTTTAGTTTGTTGCACAATTTCATTGGATTATTGTGCCGAAACCCCGCTTAAGGGTTGCTAATGTGTTTTTATTTTGTATTCTTTCTTGTGCAGACTGTAGCAGATGGAGTGGACCCACAACTACAAACTTTCTTCTTCTGGTATGTTTTCTGAACCTTGTTGTATGGAATTATCTTGTTGGCGCTTTGCCTTATTCTGTCCATATGTTTGACTATTTAATATCCAGCACAAGACCACGAAAGCGCAAGTTAAAGAACTCTATGCAGAATGGGAAGTATGTGCAGTTTTTGGAGATGGACTCACCTGGACCTGCCACAGAAGGCATGCACAAGGGATTTGTCGGGCATAACGCTGGTAATTAATCCGTTGTAAACTTTTATTTTTTCTTTTGCAGTCCTCTAGTTATTTCCTTTAAAATAGAGGAAAAAGGAATGATTTAATTGTTTGTTATGTCAGACTAACAGAAGGGGAAACTAGCATAACGTAAATATGCCATTCTGACATTCTTGCGTGTAAACTTGGCTGATAATTTGTACTTACCTGATCTTGCATGGTGTTTCATTAGAAAATTTTGGCTGGAGAAATTGAAGCCTCACGAAATGTGGTTCTAAAATTTTCAACATTTTCCACCTCGATTAGTATTCTTTTAGTTAACAAAGGATACCAATTAAAGTTGATTAAAACGTAAATTCGTCAAGGGGGTTGAGGATTTTACTTTTCGGTGTCTACCCAATTGAAATGAATATTAATTAATTGTGTTGAGATATTTTAAATTCATCGATTCCATGTTATATATCATAATTTTGAAAAGCTTATTCCGCATCAAGCGGTAGTAAGCAGTATATCTATTATCTTATTTCTTCATAGATGGATTTTCTTTTTTTTCACACTTCGTGGATTTTGAACTATATGATCTCAACAATCTGCTTGGCAACTCAACTGAAATTAAATTTGTATTTAGATGGTGTATCCTGTGAAAAAGAGGGGAGCCATTCATTCCCCATTGAGACTTATTTGCAGAATGCACAACAAGACGGAGAAAATATTGGCCCTGAATGTCCTTCCTCTATGGAGTGCATTGAACGTGTTGCATCCAGCTCAAATATTCCTGGTGTCTCAATGGCTATCAATCAATCTTCTACAGGTCCTGAATGTTATAAAGTACTGTCTGGAAGTGATCATTTACAACCAGCCAAAGCAAGGAAGTTAACAGTAGAACGAGACCCTAGAAAGTATGTTCACCATCCTTTCTAGTTTTTTCCTTCAGATATCAAAGCTTCATTCGCATGTGGTCTTGGTTGGGTTAAGTTTTGTATTGGTTGTTTACTTTCTTAGGTTGTTTCTGTTTTTGTTTTTCCGTTTAACTATTACTTCTATATTAAAACCAATTGGGACTTGCCATATAAGCATAGCTCAAGCCAACCTTATAGAGGTTCAAATATCCCAATCCTGCATGTTGTGAACTCAGAAAAAAAGGAAAAAAAAAAAAAAACATAGATCAATTGTTAAGTCATCCCTATCCTTCTACGAGGTTATACATCCCTCATTCCACAAGTAATGTAATATATTAAAAAGGGTAAATAAGGCCTTGCTTGGTAGACAATTCAAATTTTGTTTTATGTTTTCAGATTCACTGAGTTCAGCAATCTTACGTTTGGTAGACAATCTGAATTCTGTTTTTGAAAACTGTTTTCGGATTCTGTGATCCAAACAATACAAATTTTAAAACAACATTTTTATGTTTTCTACGTATCCAAATTTTGAATTTAAAATTGTGAAATGTAGAATTATATTAGAGAAGATAAAAACAACAAGTATAGTATTTCATGCTATAAATTCAATTATTTTTGTTAAATTAAGATATGTATCATATAATACATAATATATTATATGACATTATAAAATAATAATTATACAAAAAAGTTAAGATAAAACAAATTCATAAAATAATTAGTAATAATTTATATTCAACCTAATATTTAGTGAGTAACTATAATTAGTTTTATGGTTTACAAATAGATTACCAAACATATTTTGAAAAAAATTATTTAAATTGGAATTTAATAACTGAATCTGCTACCAAACACATATCTAAAAACATGAAATACAACCCTATTTTCATTGAATCCCTTGTTTTCAAAATTCCGTTTTCAGATTGCCTACCAAATAGGCCCTTAAATTTTTGGTCCCTTAGATTTTGGGGGTCGTGTCAATCTAGTCCCTTTGTTTCAAAATTGAACAATCAAATCCTTCACATTTAGAAAATCCTCAATTTCAGTCCCTTTGTAGTCAAGGTTAACCTCAAAATTTTAAAATAAAAAATAATTATTAAAATTAAGTATAGTAAAAATTAAAATTAAATATAACAAAAGAAGTTAAACAAATATTTCTCTCCCCCACCTGCTTTCTTCTCAATGTCGGCCGCTGCAAAAAAAGAAAAATGAAACAACACCAGGAATGAGAAGGAATGTCCTCACCATTTCAGATGCTGTTTAGGGGAGAGGTCGGTTTGTGGAAGTAGAAGAAGATGGGGGATAGTGTCTTTAAGATTGAGGAAGACTATATGGTGAGGAGAATAAAGAGGAAGAGGAAAAGAAAAGGAAAGAGAGAAAAAAGTGTCAGCGACGAGTGATGACCGGTGGTGGCATCCATGGATGGGATGTAGGAGAAGGTGGGAAGAGAAGGGAGAAAGAAAAGGGAAGAAGGAGAGAAGAAAGAGAAAAAGGAAAACGGAAAAATGTTTTGTTTAAACATTGAGTAAAAAATAAATGCCACTTGGTTACTAATGGAAAAATTGACAGATAATGAGTTTGGGGTTTTAAGTGATAAAACTCCTAAAGTTTAGGTGTATAAATTGATTTTTTTTCTTCCATAAAATATAACCGGTAAATAATGAGCTAAAGAGTAGAAAACAAATAGATTTTTCTTAATAAAACTCAATGAGGTTGCCTTTCATTGTTGGAAAATGCTTAGAGAAATATAATTTTCTTGACCACATTTAGATTTCCATACAATTAAATAGATAATAACACAAGTTTATACCTTTAGATCTTTACCTCAAATAATTCATTATATTTGAAAACATCAATATGTGATGTATGTTAAATAACTTTTCAAAATATATTTCTATGTCTGCGTCTTTGTTGTGTCTATGCCATATTTTTTAGGAAATGGTGTATCGTGTATTGGCATGTTCATAATGTTCATGTTTGTGTTTCCTAGCTTTACAATCCAAACGAAACCCAAACTTCAAGTTCATCTTTGAATTCTAGAGCTGTCCATAGATTTAATCAATTCTGAGTATGCCAGTAAGTAAGGGCGGTCAATTTATTTTGTTATTTCAGCCGCATGCTCTTGCAGAAACGGCAGTTTTATCACTCTCACAGGGTTCAGGTATGAAACTTGATTTTACAACATTGAGGTTTTTCAAATTGTTAAATTTACTTTAAAAATGAGTTATTTTTTATTTTGGTTTTTGGTGTGAGGGATCCTGTGCTTTCGTACTTTGCTAAGTAGGAGGGATTTAAACACACACTTTTGGAGTTTAAGTTGATGATCAGTTTGATTTGGTTTAGTCTCGTTCAATTTAGAGAGAATGGTAAGAAATGAAAATGAAATAAGTTACGATTAGGAGAATAATCCAACCAATTTGTTAGGAAGCGGTGAAAAATGTTAGCTCGGCATCGGGTTTGGATCAGTGGTATTTTTATTTGTTTATTTTCAGTCCTACCGTCCAATCATTCAACATATAGTAGTCAAAACATATGTAAGAATTCAAAGTTCTAGCTACGCCTGCATCTAGTTTGCTACCATGTTATTGTCAGTCCTTTTTTACTGGAATGAAATCTGTTGCTTGCTCATCGCTATCTTCTGTTTTGATAATGAAGCCTATGGCTCTAGATAAAGTACTATCCGACAAAGATAGTGAGGACGAAGTAGATGATGACATTGCAGATTTCGAAGACCGAAGGGTATGGTTTCTGTTGAACTAGTAAATATTTGACTTGTTCCTGCTGGGAATATTTTTGAAGGATTTTTCTATAAGATTTCGAAGTGATTTTTCAAACTAGCAATATGGAATATCTTGGTCTGGCACATGATTACAACCTTGTGCAACACTGTTTAGACCTGTTAAACCCATTTTCTGGAATTTGTGCAAACTTGAAATACCAACTTGAGCTGTTAGTTTACAGATGCTCGATGATTTCGTGGATGTCACCAGAGATGAAAAGCGGCTTATGCATCTATGGAACTCCTTTGTTAGAAAGCAAAGGTTGTTCCTTCCCAACGTTATTTTCCTTATCAATTCTTTCCTCTATACTGTTTGATTCTACTTTAACATGGTACCAGGCTGAGCTGCACCATGAATAATATTTCCTGGCAGTCCCATAATTCCTATATATAAAATAAGTATATTCTCTGCTGTGTACCAGGGTGCTAGCTGATGGTCACGTGCCGTGGGCATGTGAAGCATTCTCAAAACTTCATGGGAAAGAGCTTATCTCATCTCCGCCTCTCTTTTGGTAA ATGCTTTTGTGCTTATCTTTTAGGGTTTGCGCTACCACTTATGCTCTTCCCATGATATGTTCAACTTCGAATACTGGGTTGGTGACTGAAGAATATCAGGCGGTGAATGTCTCTGTGAAAATTGATGTCTTTAGATCTGAGACTGTAGCAGATGGAGTGGACCCACAACTACAAACTTTCTTCTTCTGCACAAGACCACGAAAGCGCAAGTTAAAGAACTCTATGCAGAATGGGAAGTATGTGCAGTTTTTGGAGATGGACTCACCTGGACCTGCCACAGAAGGCATGCACAAGGGATTTGTCGGGCATAACGCTGATGGTGTATCCTGTGAAAAAGAGGGGAGCCATTCATTCCCCATTGAGACTTATTTGCAGAATGCACAACAAGACGGAGAAAATATTGGCCCTGAATGTCCTTCCTCTATGGAGTGCATTGAACGTGTTGCATCCAGCTCAAATATTCCTGGTGTCTCAATGGCTATCAATCAATCTTCTACAGGTCCTGAATGTTATAAAGTACTGTCTGGAAGTGATCATTTACAACCAGCCAAAGCAAGGAAGTTAACAGTAGAACGAGACCCTAGAAACCGCATGCTCTTGCAGAAACGGCAGTTTTATCACTCTCACAGGGTTCAGCCTATGGCTCTAGATAAAGTACTATCCGACAAAGATAGTGAGGACGAAGTAGATGATGACATTGCAGATTTCGAAGACCGAAGGATGCTCGATGATTTCGTGGATGTCACCAGAGATGAAAAGCGGCTTATGCATCTATGGAACTCCTTTGTTAGAAAGCAAAGGGTGCTAGCTGATGGTCACGTGCCGTGGGCATGTGAAGCATTCTCAAAACTTCATGGGAAAGAGCTTATCTCATCTCCGCCTCTCTTTTGGTAA ATGCTTTTGTGCTTATCTTTTAGGGTTTGCGCTACCACTTATGCTCTTCCCATGATATGTTCAACTTCGAATACTGGGTTGGTGACTGAAGAATATCAGGCGGTGAATGTCTCTGTGAAAATTGATGTCTTTAGATCTGAGACTGTAGCAGATGGAGTGGACCCACAACTACAAACTTTCTTCTTCTGCACAAGACCACGAAAGCGCAAGTTAAAGAACTCTATGCAGAATGGGAAGTATGTGCAGTTTTTGGAGATGGACTCACCTGGACCTGCCACAGAAGGCATGCACAAGGGATTTGTCGGGCATAACGCTGATGGTGTATCCTGTGAAAAAGAGGGGAGCCATTCATTCCCCATTGAGACTTATTTGCAGAATGCACAACAAGACGGAGAAAATATTGGCCCTGAATGTCCTTCCTCTATGGAGTGCATTGAACGTGTTGCATCCAGCTCAAATATTCCTGGTGTCTCAATGGCTATCAATCAATCTTCTACAGGTCCTGAATGTTATAAAGTACTGTCTGGAAGTGATCATTTACAACCAGCCAAAGCAAGGAAGTTAACAGTAGAACGAGACCCTAGAAACCGCATGCTCTTGCAGAAACGGCAGTTTTATCACTCTCACAGGGTTCAGCCTATGGCTCTAGATAAAGTACTATCCGACAAAGATAGTGAGGACGAAGTAGATGATGACATTGCAGATTTCGAAGACCGAAGGATGCTCGATGATTTCGTGGATGTCACCAGAGATGAAAAGCGGCTTATGCATCTATGGAACTCCTTTGTTAGAAAGCAAAGGGTGCTAGCTGATGGTCACGTGCCGTGGGCATGTGAAGCATTCTCAAAACTTCATGGGAAAGAGCTTATCTCATCTCCGCCTCTCTTTTGGTAA MLLCLSFRVCATTYALPMICSTSNTGLVTEEYQAVNVSVKIDVFRSETVADGVDPQLQTFFFCTRPRKRKLKNSMQNGKYVQFLEMDSPGPATEGMHKGFVGHNADGVSCEKEGSHSFPIETYLQNAQQDGENIGPECPSSMECIERVASSSNIPGVSMAINQSSTGPECYKVLSGSDHLQPAKARKLTVERDPRNRMLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTRDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELISSPPLFW
BLAST of Cla005608 vs. Swiss-Prot
Match: EMF2_ARATH (Polycomb group protein EMBRYONIC FLOWER 2 OS=Arabidopsis thaliana GN=EMF2 PE=1 SV=2) HSP 1 Score: 243.0 bits (619), Expect = 4.0e-63 Identity = 144/300 (48.00%), Postives = 186/300 (62.00%), Query Frame = 1
BLAST of Cla005608 vs. Swiss-Prot
Match: VRN2_ARATH (Polycomb group protein VERNALIZATION 2 OS=Arabidopsis thaliana GN=VRN2 PE=1 SV=2) HSP 1 Score: 214.5 bits (545), Expect = 1.5e-54 Identity = 124/271 (45.76%), Postives = 160/271 (59.04%), Query Frame = 1
BLAST of Cla005608 vs. Swiss-Prot
Match: FIS2L_ARATH (Polycomb group protein FERTILIZATION-INDEPENDENT SEED 2 OS=Arabidopsis thaliana GN=FIS2 PE=1 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 7.9e-27 Identity = 58/116 (50.00%), Postives = 80/116 (68.97%), Query Frame = 1
BLAST of Cla005608 vs. Swiss-Prot
Match: FIS2C_ARATH (Polycomb group protein FERTILIZATION-INDEPENDENT SEED 2 OS=Arabidopsis thaliana GN=FIS2 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.3e-26 Identity = 72/191 (37.70%), Postives = 103/191 (53.93%), Query Frame = 1
BLAST of Cla005608 vs. Swiss-Prot
Match: SZ12A_DANRE (Polycomb protein suz12-A OS=Danio rerio GN=suz12a PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.4e-07 Identity = 45/165 (27.27%), Postives = 67/165 (40.61%), Query Frame = 1
BLAST of Cla005608 vs. TrEMBL
Match: A0A0A0L461_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017280 PE=4 SV=1) HSP 1 Score: 540.8 bits (1392), Expect = 1.0e-150 Identity = 269/301 (89.37%), Postives = 279/301 (92.69%), Query Frame = 1
BLAST of Cla005608 vs. TrEMBL
Match: A0A0B2SCY3_GLYSO (Polycomb group protein VERNALIZATION 2 OS=Glycine soja GN=glysoja_018911 PE=4 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 2.3e-94 Identity = 183/274 (66.79%), Postives = 218/274 (79.56%), Query Frame = 1
BLAST of Cla005608 vs. TrEMBL
Match: I1J9S4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G206000 PE=4 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 6.8e-94 Identity = 182/274 (66.42%), Postives = 217/274 (79.20%), Query Frame = 1
BLAST of Cla005608 vs. TrEMBL
Match: A0A0B2RJZ5_GLYSO (Polycomb group protein VERNALIZATION 2 (Fragment) OS=Glycine soja GN=glysoja_004667 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 4.4e-93 Identity = 183/278 (65.83%), Postives = 218/278 (78.42%), Query Frame = 1
BLAST of Cla005608 vs. TrEMBL
Match: A0A0R0HLN7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G036800 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 4.4e-93 Identity = 183/278 (65.83%), Postives = 218/278 (78.42%), Query Frame = 1
BLAST of Cla005608 vs. NCBI nr
Match: gi|659095839|ref|XP_008448794.1| (PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 [Cucumis melo]) HSP 1 Score: 544.3 bits (1401), Expect = 1.3e-151 Identity = 272/301 (90.37%), Postives = 280/301 (93.02%), Query Frame = 1
BLAST of Cla005608 vs. NCBI nr
Match: gi|449458988|ref|XP_004147228.1| (PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 isoform X1 [Cucumis sativus]) HSP 1 Score: 540.8 bits (1392), Expect = 1.5e-150 Identity = 269/301 (89.37%), Postives = 279/301 (92.69%), Query Frame = 1
BLAST of Cla005608 vs. NCBI nr
Match: gi|778675274|ref|XP_011650380.1| (PREDICTED: polycomb group protein EMBRYONIC FLOWER 2 isoform X2 [Cucumis sativus]) HSP 1 Score: 475.7 bits (1223), Expect = 5.9e-131 Identity = 239/272 (87.87%), Postives = 250/272 (91.91%), Query Frame = 1
BLAST of Cla005608 vs. NCBI nr
Match: gi|734424440|gb|KHN42668.1| (Polycomb group protein VERNALIZATION 2 [Glycine soja]) HSP 1 Score: 353.6 bits (906), Expect = 3.4e-94 Identity = 183/274 (66.79%), Postives = 218/274 (79.56%), Query Frame = 1
BLAST of Cla005608 vs. NCBI nr
Match: gi|356497109|ref|XP_003517406.1| (PREDICTED: polycomb group protein EMBRYONIC FLOWER 2-like [Glycine max]) HSP 1 Score: 352.1 bits (902), Expect = 9.8e-94 Identity = 182/274 (66.42%), Postives = 217/274 (79.20%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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