Cla005539 (gene) Watermelon (97103) v1

Overview
NameCla005539
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionV-type ATP synthase subunit D (AHRD V1 ***- VATD_DEIGD); contains Interpro domain(s) IPR002699 ATPase, V1/A1 complex, subunit D
LocationChr9 : 34236216 .. 34237001 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGGCCAAAGCCAGCGTTTGAATGTGGTTCCGACAGTTACAATGCTTGGAGCGATGAAAGCTCGTCTTGTTGGTGCAACCAGAGGTCATGCTCTTCTCAAAAAGAAGAGTGATGCTTTGACCGTTCAGTTCCGTCAGATACTCAAGAAGATTGTCACAGCTAAGGAATCAATGGGGGATGTCATGAAGACATCTGCATTTTCTCTCACCGAAGCAAAATATGTTGCTGGTGACAATATCAAGCATATTGTCCTTGAGAATGTCCAAAGTGCAGCTATCAAGATTCGATCTCGGCAGGAGAATATAGCTGGTGTAAAGCTCCCAAAATTTGAACATTATTCTGATGGTGAGACTAAAAATGATCTCACAGGGTTAGCTAGGGGTGGACAACAGATCCAGCTGTGTCGGGGCGCCTATGTAAAGGCAATTGAGGTTCTTGTTGAGCTTGCCTCACTCCAGACGTCATTTTTGACTCTTGATGAGGCAATTAAAACCACAAACCGCAGGGTCAACGCTCTAGAGAATGTTGTGAAGCCAAGGATCGAGAATACTATAAGTTACATTAAGGGAGAATTGGACGAGCTGGAAAGGGAAGATTTCTTTAGACTGAAAAAGATTCAGGGTTATAAGAGAAGGGAAATTGAGAAACAACGTGCCAATGCTAAGCTATTTGCTGAGGAACAACTTGCTGAGAAGATATCTTTGCAAAAGGGTGTCTCCATAAGTTCAGCTCACAATTTATTGTCTGCAGCTGCTGAGAAGGATGAGGATATTATTTTCTGA

mRNA sequence

ATGTCGGGCCAAAGCCAGCGTTTGAATGTGGTTCCGACAGTTACAATGCTTGGAGCGATGAAAGCTCGTCTTGTTGGTGCAACCAGAGGTCATGCTCTTCTCAAAAAGAAGAGTGATGCTTTGACCGTTCAGTTCCGTCAGATACTCAAGAAGATTGTCACAGCTAAGGAATCAATGGGGGATGTCATGAAGACATCTGCATTTTCTCTCACCGAAGCAAAATATGTTGCTGGTGACAATATCAAGCATATTGTCCTTGAGAATGTCCAAAGTGCAGCTATCAAGATTCGATCTCGGCAGGAGAATATAGCTGGTGTAAAGCTCCCAAAATTTGAACATTATTCTGATGGTGAGACTAAAAATGATCTCACAGGGTTAGCTAGGGGTGGACAACAGATCCAGCTGTGTCGGGGCGCCTATGTAAAGGCAATTGAGGTTCTTGTTGAGCTTGCCTCACTCCAGACGTCATTTTTGACTCTTGATGAGGCAATTAAAACCACAAACCGCAGGGTCAACGCTCTAGAGAATGTTGTGAAGCCAAGGATCGAGAATACTATAAGTTACATTAAGGGAGAATTGGACGAGCTGGAAAGGGAAGATTTCTTTAGACTGAAAAAGATTCAGGGTTATAAGAGAAGGGAAATTGAGAAACAACGTGCCAATGCTAAGCTATTTGCTGAGGAACAACTTGCTGAGAAGATATCTTTGCAAAAGGGTGTCTCCATAAGTTCAGCTCACAATTTATTGTCTGCAGCTGCTGAGAAGGATGAGGATATTATTTTCTGA

Coding sequence (CDS)

ATGTCGGGCCAAAGCCAGCGTTTGAATGTGGTTCCGACAGTTACAATGCTTGGAGCGATGAAAGCTCGTCTTGTTGGTGCAACCAGAGGTCATGCTCTTCTCAAAAAGAAGAGTGATGCTTTGACCGTTCAGTTCCGTCAGATACTCAAGAAGATTGTCACAGCTAAGGAATCAATGGGGGATGTCATGAAGACATCTGCATTTTCTCTCACCGAAGCAAAATATGTTGCTGGTGACAATATCAAGCATATTGTCCTTGAGAATGTCCAAAGTGCAGCTATCAAGATTCGATCTCGGCAGGAGAATATAGCTGGTGTAAAGCTCCCAAAATTTGAACATTATTCTGATGGTGAGACTAAAAATGATCTCACAGGGTTAGCTAGGGGTGGACAACAGATCCAGCTGTGTCGGGGCGCCTATGTAAAGGCAATTGAGGTTCTTGTTGAGCTTGCCTCACTCCAGACGTCATTTTTGACTCTTGATGAGGCAATTAAAACCACAAACCGCAGGGTCAACGCTCTAGAGAATGTTGTGAAGCCAAGGATCGAGAATACTATAAGTTACATTAAGGGAGAATTGGACGAGCTGGAAAGGGAAGATTTCTTTAGACTGAAAAAGATTCAGGGTTATAAGAGAAGGGAAATTGAGAAACAACGTGCCAATGCTAAGCTATTTGCTGAGGAACAACTTGCTGAGAAGATATCTTTGCAAAAGGGTGTCTCCATAAGTTCAGCTCACAATTTATTGTCTGCAGCTGCTGAGAAGGATGAGGATATTATTTTCTGA

Protein sequence

MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMGDVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETKNDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGVSISSAHNLLSAAAEKDEDIIF
Homology
[Close]
BLAST of Cla005539 vs. Swiss-Prot
Match: VATD_ARATH (V-type proton ATPase subunit D OS=Arabidopsis thaliana GN=VHA-D PE=1 SV=2)

HSP 1 Score: 428.3 bits (1100), Expect = 5.9e-119
Identity = 215/261 (82.38%), Postives = 239/261 (91.57%), Query Frame = 1 

Query: 1   MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           M+GQ+ RLNVVPTVTMLG MKARLVGATRGHALLKKKSDALTVQFR +LKKIVTAKESMG
Sbjct: 1   MAGQNARLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRALLKKIVTAKESMG 60

Query: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETK 120
           D+MKTS+F+LTE KYVAGDN+KH+VLENV+ A +K+RSR ENIAGVKLPKF+H+S+GETK
Sbjct: 61  DMMKTSSFALTEVKYVAGDNVKHVVLENVKEATLKVRSRTENIAGVKLPKFDHFSEGETK 120

Query: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
           NDLTGLARGGQQ++ CR AYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQVRACRVAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGV 240
           ++ENTISYIKGELDELEREDFFRLKKIQGYKRRE+E+Q ANAK FAEE + E IS+Q+G+
Sbjct: 181 KLENTISYIKGELDELEREDFFRLKKIQGYKRREVERQAANAKEFAEEMVLEDISMQRGI 240

Query: 241 SISSAHNLLSAAAEKDEDIIF 262
           SI++A N L   AEKD DIIF
Sbjct: 241 SINAARNFLVGGAEKDSDIIF 261

[Close]
BLAST of Cla005539 vs. Swiss-Prot
Match: VATD1_DROME (V-type proton ATPase subunit D 1 OS=Drosophila melanogaster GN=Vha36-1 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.4e-64
Identity = 139/261 (53.26%), Postives = 181/261 (69.35%), Query Frame = 1 

Query: 1   MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSG+  RL + P+      MKARL GA +GH LLKKK+DAL ++FR IL KI+  K  MG
Sbjct: 1   MSGKD-RLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMG 60

Query: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETK 120
           DVMK +AFSL EAK+ +GD I  +VL+NV  A IKIR++++N+AGV LP FE Y DG   
Sbjct: 61  DVMKEAAFSLAEAKFTSGD-INQVVLQNVTKAQIKIRTKKDNVAGVTLPVFESYQDGSDT 120

Query: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
            +L GLARGGQQ+   +  Y  A+++LVELASLQTSF+TLDE IK TNRRVNA+E+V+ P
Sbjct: 121 YELAGLARGGQQLAKLKKNYQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP 180

Query: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGV 240
           RI+ T++YI  ELDELERE+F+RLKKIQ  KR         A++ A+ + AE   LQ+G+
Sbjct: 181 RIDRTLAYIISELDELEREEFYRLKKIQDKKR--------EARIKADAKKAE--LLQQGI 240

Query: 241 SISSAHNLLSAAAEKDEDIIF 262
            +    N+L    E D+D++F
Sbjct: 241 DVRQQANILD---EGDDDVLF 246

[Close]
BLAST of Cla005539 vs. Swiss-Prot
Match: VATD_PONAB (V-type proton ATPase subunit D OS=Pongo abelii GN=ATP6V1D PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.2e-64
Identity = 139/261 (53.26%), Postives = 181/261 (69.35%), Query Frame = 1 

Query: 1   MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSG+  R+ + P+      MKARL GA  G  LLKKKSDALT++FRQILKKI+  K  MG
Sbjct: 1   MSGKD-RIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 60

Query: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETK 120
           +VM+ +AFSL EAK+ AGD     V++NV  A +KIR++++N+AGV LP FEHY +G   
Sbjct: 61  EVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDS 120

Query: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
            +LTGLARGG+Q+   +  Y KA+E+LVELASLQTSF+TLDEAIK TNRRVNA+E+V+ P
Sbjct: 121 YELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIP 180

Query: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGV 240
           RIE T++YI  ELDE ERE+F+RLKKIQ  ++++I K+++   L       E        
Sbjct: 181 RIERTLAYIITELDEREREEFYRLKKIQ--EKKKILKEKSEKDLEQRRAAGE-------- 240

Query: 241 SISSAHNLLSAAAEKDEDIIF 262
            +    NLL  A EKDED++F
Sbjct: 241 -VLEPANLL--AEEKDEDLLF 246

[Close]
BLAST of Cla005539 vs. Swiss-Prot
Match: VATD_HUMAN (V-type proton ATPase subunit D OS=Homo sapiens GN=ATP6V1D PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.2e-64
Identity = 139/261 (53.26%), Postives = 181/261 (69.35%), Query Frame = 1 

Query: 1   MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSG+  R+ + P+      MKARL GA  G  LLKKKSDALT++FRQILKKI+  K  MG
Sbjct: 1   MSGKD-RIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 60

Query: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETK 120
           +VM+ +AFSL EAK+ AGD     V++NV  A +KIR++++N+AGV LP FEHY +G   
Sbjct: 61  EVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDS 120

Query: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
            +LTGLARGG+Q+   +  Y KA+E+LVELASLQTSF+TLDEAIK TNRRVNA+E+V+ P
Sbjct: 121 YELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIP 180

Query: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGV 240
           RIE T++YI  ELDE ERE+F+RLKKIQ  ++++I K+++   L       E        
Sbjct: 181 RIERTLAYIITELDEREREEFYRLKKIQ--EKKKILKEKSEKDLEQRRAAGE-------- 240

Query: 241 SISSAHNLLSAAAEKDEDIIF 262
            +    NLL  A EKDED++F
Sbjct: 241 -VLEPANLL--AEEKDEDLLF 246

[Close]
BLAST of Cla005539 vs. Swiss-Prot
Match: VATD_MOUSE (V-type proton ATPase subunit D OS=Mus musculus GN=Atp6v1d PE=1 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 7.1e-64
Identity = 139/261 (53.26%), Postives = 180/261 (68.97%), Query Frame = 1 

Query: 1   MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSG+  R+ + P+      MKARL GA  G  LLKKKSDALT++FRQILKKI+  K  MG
Sbjct: 1   MSGKD-RIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMG 60

Query: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETK 120
           +VM+ +AFSL EAK+ AGD     V++NV  A +KIR++++N+AGV LP FEHY +G   
Sbjct: 61  EVMREAAFSLAEAKFTAGD-FSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDS 120

Query: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
            +LTGLARGG+Q+   +  Y KA+E+LVELASLQTSF+TLDEAIK TNRRVNA+E+V+ P
Sbjct: 121 YELTGLARGGEQLAKLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIP 180

Query: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGV 240
           RIE T++YI  ELDE ERE+F+RLKKIQ  ++++I K++    L       E        
Sbjct: 181 RIERTLAYIITELDEREREEFYRLKKIQ--EKKKIIKEKFEKDLERRRAAGE-------- 240

Query: 241 SISSAHNLLSAAAEKDEDIIF 262
            +    NLL  A EKDED++F
Sbjct: 241 -VMEPANLL--AEEKDEDLLF 246

[Close]
BLAST of Cla005539 vs. TrEMBL
Match: A0A0A0KGM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G422820 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 1.8e-135
Identity = 256/261 (98.08%), Postives = 261/261 (100.00%), Query Frame = 1 

Query: 1   MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSGQ+QRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIV+AKESMG
Sbjct: 1   MSGQTQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSAKESMG 60

Query: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETK 120
           DVMKTSAFSLTEAKYVAGDNIKHIVLENVQ+AAIKIRSRQENIAGVKLPKFEHYSDGETK
Sbjct: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQTAAIKIRSRQENIAGVKLPKFEHYSDGETK 120

Query: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
           NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGV 240
           RIENTISYIKGELDELEREDFFRLKKIQGYKRREIE+QRANAKLFAEEQLAEK+SLQKGV
Sbjct: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIERQRANAKLFAEEQLAEKVSLQKGV 240

Query: 241 SISSAHNLLSAAAEKDEDIIF 262
           SISSAHNLLSAAAEKDEDIIF
Sbjct: 241 SISSAHNLLSAAAEKDEDIIF 261

[Close]
BLAST of Cla005539 vs. TrEMBL
Match: A0A0D2RXL7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G042900 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 6.6e-125
Identity = 230/261 (88.12%), Postives = 254/261 (97.32%), Query Frame = 1 

Query: 1   MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSGQSQRLNVVPTVTMLG MKARLVGATRGHALLKKKSDALTVQFRQILKKIV+ KESMG
Sbjct: 1   MSGQSQRLNVVPTVTMLGIMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 60

Query: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETK 120
           ++MKTS+FSLTEAKYVAG+NIKH+VLENVQ+A++K+RSRQEN+AGVKLPKFE++++GETK
Sbjct: 61  EIMKTSSFSLTEAKYVAGENIKHVVLENVQNASLKVRSRQENVAGVKLPKFEYFTEGETK 120

Query: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
           NDLTGLARGGQQ+Q CR AYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQVQQCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGV 240
           R+ENTISYIKGELDELEREDFFRLKKIQGYK+REIE+Q A AKLFAEEQ+AEK+SL+KGV
Sbjct: 181 RLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQLAEAKLFAEEQVAEKVSLRKGV 240

Query: 241 SISSAHNLLSAAAEKDEDIIF 262
           SI+SAHN+LSAA EKDEDIIF
Sbjct: 241 SINSAHNMLSAAREKDEDIIF 261

[Close]
BLAST of Cla005539 vs. TrEMBL
Match: A0A0B0MXA4_GOSAR (V-type proton ATPase subunit D-like protein OS=Gossypium arboreum GN=F383_31511 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 6.6e-125
Identity = 230/261 (88.12%), Postives = 254/261 (97.32%), Query Frame = 1 

Query: 1   MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSGQSQRLNVVPTVTMLG MKARLVGATRGHALLKKKSDALTVQFRQILKKIV+ KESMG
Sbjct: 1   MSGQSQRLNVVPTVTMLGIMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 60

Query: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETK 120
           ++MKTS+FSLTEAKYVAG+NIKH+VLENVQ+A++K+RSRQEN+AGVKLPKFE++++GETK
Sbjct: 61  EIMKTSSFSLTEAKYVAGENIKHVVLENVQNASLKVRSRQENVAGVKLPKFEYFTEGETK 120

Query: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
           NDLTGLARGGQQ+Q CR AYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQVQQCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGV 240
           R+ENTISYIKGELDELEREDFFRLKKIQGYK+REIE+Q A AKLFAEEQ+AEK+SL+KGV
Sbjct: 181 RLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQLAEAKLFAEEQVAEKVSLRKGV 240

Query: 241 SISSAHNLLSAAAEKDEDIIF 262
           SI+SAHN+LSAA EKDEDIIF
Sbjct: 241 SINSAHNMLSAAREKDEDIIF 261

[Close]
BLAST of Cla005539 vs. TrEMBL
Match: A0A061DJY4_THECC (ATP synthase subunit d, putative isoform 1 OS=Theobroma cacao GN=TCM_001812 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 1.5e-124
Identity = 232/261 (88.89%), Postives = 251/261 (96.17%), Query Frame = 1 

Query: 1   MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSGQSQRLNVVPTVTMLG MKARLVGATRGHALLKKKSDALTVQFRQILKKIV+ KESMG
Sbjct: 1   MSGQSQRLNVVPTVTMLGIMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 60

Query: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETK 120
           D+MKTS+F+LTEAKYVAG+NIKHIVLENVQ+A++K+RSRQEN+AGVKLPKFE+++DGETK
Sbjct: 61  DIMKTSSFALTEAKYVAGENIKHIVLENVQNASLKVRSRQENVAGVKLPKFEYFTDGETK 120

Query: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
           NDLTGLARGGQQ+Q CR AYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQVQQCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGV 240
           R+ENTISYIKGELDELEREDFFRLKKIQGYK+REIE+Q A AK FAE+Q  EKISLQKGV
Sbjct: 181 RLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQLAAAKQFAEDQFGEKISLQKGV 240

Query: 241 SISSAHNLLSAAAEKDEDIIF 262
           SI+SAHNLLSAA EKDEDIIF
Sbjct: 241 SINSAHNLLSAAMEKDEDIIF 261

[Close]
BLAST of Cla005539 vs. TrEMBL
Match: A0A059DGT5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01954 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 6.1e-123
Identity = 227/261 (86.97%), Postives = 249/261 (95.40%), Query Frame = 1 

Query: 1   MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSGQSQRLNVVPTVTMLG MKARLVGATRGHALLKKKSDALTVQFRQILKKIV  KESMG
Sbjct: 1   MSGQSQRLNVVPTVTMLGIMKARLVGATRGHALLKKKSDALTVQFRQILKKIVLTKESMG 60

Query: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETK 120
           D+MK S+F+LTEAKYVAG+N+KH+VLENVQ+A++K+RSRQEN+AGVKLPKFE+++DGETK
Sbjct: 61  DIMKASSFALTEAKYVAGENVKHVVLENVQNASLKVRSRQENVAGVKLPKFEYFTDGETK 120

Query: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
           N LTGLARGGQQ+QLCR AYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NALTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGV 240
           R+ENTISYIKGELDELEREDFFRLKKIQGYK+REIE+Q A+AK FAEEQ AEK+SL KGV
Sbjct: 181 RLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQLASAKRFAEEQFAEKVSLHKGV 240

Query: 241 SISSAHNLLSAAAEKDEDIIF 262
           SI++AHNLLS A EKDEDIIF
Sbjct: 241 SINTAHNLLSVAMEKDEDIIF 261

[Close]
BLAST of Cla005539 vs. NCBI nr
Match: gi|449444755|ref|XP_004140139.1| (PREDICTED: V-type proton ATPase subunit D [Cucumis sativus])

HSP 1 Score: 490.0 bits (1260), Expect = 2.6e-135
Identity = 256/261 (98.08%), Postives = 261/261 (100.00%), Query Frame = 1 

Query: 1   MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSGQ+QRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIV+AKESMG
Sbjct: 1   MSGQTQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSAKESMG 60

Query: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETK 120
           DVMKTSAFSLTEAKYVAGDNIKHIVLENVQ+AAIKIRSRQENIAGVKLPKFEHYSDGETK
Sbjct: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQTAAIKIRSRQENIAGVKLPKFEHYSDGETK 120

Query: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
           NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGV 240
           RIENTISYIKGELDELEREDFFRLKKIQGYKRREIE+QRANAKLFAEEQLAEK+SLQKGV
Sbjct: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIERQRANAKLFAEEQLAEKVSLQKGV 240

Query: 241 SISSAHNLLSAAAEKDEDIIF 262
           SISSAHNLLSAAAEKDEDIIF
Sbjct: 241 SISSAHNLLSAAAEKDEDIIF 261

[Close]
BLAST of Cla005539 vs. NCBI nr
Match: gi|659097220|ref|XP_008449506.1| (PREDICTED: V-type proton ATPase subunit D [Cucumis melo])

HSP 1 Score: 488.0 bits (1255), Expect = 1.0e-134
Identity = 255/261 (97.70%), Postives = 261/261 (100.00%), Query Frame = 1 

Query: 1   MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSGQ+QRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIV+AKESMG
Sbjct: 1   MSGQTQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSAKESMG 60

Query: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETK 120
           DVMKTSAFSLTEAKYVAGDNIKHIVLENVQ+AAIKIRSRQENIAGVKLPKFEHYSDGETK
Sbjct: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQTAAIKIRSRQENIAGVKLPKFEHYSDGETK 120

Query: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
           NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGV 240
           RIENTISYIKGELDELEREDFFRLKKIQGYKRREIE+QRA+AKLFAEEQLAEK+SLQKGV
Sbjct: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIERQRASAKLFAEEQLAEKVSLQKGV 240

Query: 241 SISSAHNLLSAAAEKDEDIIF 262
           SISSAHNLLSAAAEKDEDIIF
Sbjct: 241 SISSAHNLLSAAAEKDEDIIF 261

[Close]
BLAST of Cla005539 vs. NCBI nr
Match: gi|823253409|ref|XP_012459327.1| (PREDICTED: V-type proton ATPase subunit D [Gossypium raimondii])

HSP 1 Score: 454.9 bits (1169), Expect = 9.4e-125
Identity = 230/261 (88.12%), Postives = 254/261 (97.32%), Query Frame = 1 

Query: 1   MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSGQSQRLNVVPTVTMLG MKARLVGATRGHALLKKKSDALTVQFRQILKKIV+ KESMG
Sbjct: 1   MSGQSQRLNVVPTVTMLGIMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 60

Query: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETK 120
           ++MKTS+FSLTEAKYVAG+NIKH+VLENVQ+A++K+RSRQEN+AGVKLPKFE++++GETK
Sbjct: 61  EIMKTSSFSLTEAKYVAGENIKHVVLENVQNASLKVRSRQENVAGVKLPKFEYFTEGETK 120

Query: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
           NDLTGLARGGQQ+Q CR AYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQVQQCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGV 240
           R+ENTISYIKGELDELEREDFFRLKKIQGYK+REIE+Q A AKLFAEEQ+AEK+SL+KGV
Sbjct: 181 RLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQLAEAKLFAEEQVAEKVSLRKGV 240

Query: 241 SISSAHNLLSAAAEKDEDIIF 262
           SI+SAHN+LSAA EKDEDIIF
Sbjct: 241 SINSAHNMLSAAREKDEDIIF 261

[Close]
BLAST of Cla005539 vs. NCBI nr
Match: gi|590710312|ref|XP_007048793.1| (ATP synthase subunit d, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 453.8 bits (1166), Expect = 2.1e-124
Identity = 232/261 (88.89%), Postives = 251/261 (96.17%), Query Frame = 1 

Query: 1   MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSGQSQRLNVVPTVTMLG MKARLVGATRGHALLKKKSDALTVQFRQILKKIV+ KESMG
Sbjct: 1   MSGQSQRLNVVPTVTMLGIMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 60

Query: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETK 120
           D+MKTS+F+LTEAKYVAG+NIKHIVLENVQ+A++K+RSRQEN+AGVKLPKFE+++DGETK
Sbjct: 61  DIMKTSSFALTEAKYVAGENIKHIVLENVQNASLKVRSRQENVAGVKLPKFEYFTDGETK 120

Query: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
           NDLTGLARGGQQ+Q CR AYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQVQQCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGV 240
           R+ENTISYIKGELDELEREDFFRLKKIQGYK+REIE+Q A AK FAE+Q  EKISLQKGV
Sbjct: 181 RLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQLAAAKQFAEDQFGEKISLQKGV 240

Query: 241 SISSAHNLLSAAAEKDEDIIF 262
           SI+SAHNLLSAA EKDEDIIF
Sbjct: 241 SINSAHNLLSAAMEKDEDIIF 261

[Close]
BLAST of Cla005539 vs. NCBI nr
Match: gi|1009126777|ref|XP_015880338.1| (PREDICTED: V-type proton ATPase subunit D [Ziziphus jujuba])

HSP 1 Score: 449.9 bits (1156), Expect = 3.0e-123
Identity = 227/261 (86.97%), Postives = 253/261 (96.93%), Query Frame = 1 

Query: 1   MSGQSQRLNVVPTVTMLGAMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSGQSQRLNVVPTVTMLG +KARLVGATRGHALLKKKSDALTVQFRQILKKIV+ KESMG
Sbjct: 1   MSGQSQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 60

Query: 61  DVMKTSAFSLTEAKYVAGDNIKHIVLENVQSAAIKIRSRQENIAGVKLPKFEHYSDGETK 120
           ++MKTS+F+LTEAKYVAG+NIKHIVLENVQ+A++K+RSRQEN+AGVKLPKF++++DGETK
Sbjct: 61  EIMKTSSFALTEAKYVAGENIKHIVLENVQNASLKVRSRQENVAGVKLPKFDYFTDGETK 120

Query: 121 NDLTGLARGGQQIQLCRGAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180
           NDLTGLARGGQQ+QLCR AYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP
Sbjct: 121 NDLTGLARGGQQVQLCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKP 180

Query: 181 RIENTISYIKGELDELEREDFFRLKKIQGYKRREIEKQRANAKLFAEEQLAEKISLQKGV 240
           R+ENTI+YIKGELDELEREDFFRLKKIQGYK+RE+++Q A AK FAEEQ AEK+SL KGV
Sbjct: 181 RLENTITYIKGELDELEREDFFRLKKIQGYKKREMQRQLAAAKQFAEEQFAEKVSLHKGV 240

Query: 241 SISSAHNLLSAAAEKDEDIIF 262
           SI++AHNLLSAAAEKDEDIIF
Sbjct: 241 SINTAHNLLSAAAEKDEDIIF 261

The following BLAST results are available for this feature:
BLAST of Cla005539 vs. Swiss-Prot
Match NameE-valueIdentityDescription
VATD_ARATH5.9e-11982.38V-type proton ATPase subunit D OS=Arabidopsis thaliana GN=VHA-D PE=1 SV=2[more]
VATD1_DROME2.4e-6453.26V-type proton ATPase subunit D 1 OS=Drosophila melanogaster GN=Vha36-1 PE=2 SV=1[more]
VATD_PONAB4.2e-6453.26V-type proton ATPase subunit D OS=Pongo abelii GN=ATP6V1D PE=2 SV=1[more]
VATD_HUMAN4.2e-6453.26V-type proton ATPase subunit D OS=Homo sapiens GN=ATP6V1D PE=1 SV=1[more]
VATD_MOUSE7.1e-6453.26V-type proton ATPase subunit D OS=Mus musculus GN=Atp6v1d PE=1 SV=1[more]
BLAST of Cla005539 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGM2_CUCSA1.8e-13598.08Uncharacterized protein OS=Cucumis sativus GN=Csa_6G422820 PE=4 SV=1[more]
A0A0D2RXL7_GOSRA6.6e-12588.12Uncharacterized protein OS=Gossypium raimondii GN=B456_012G042900 PE=4 SV=1[more]
A0A0B0MXA4_GOSAR6.6e-12588.12V-type proton ATPase subunit D-like protein OS=Gossypium arboreum GN=F383_31511 ... [more]
A0A061DJY4_THECC1.5e-12488.89ATP synthase subunit d, putative isoform 1 OS=Theobroma cacao GN=TCM_001812 PE=4... [more]
A0A059DGT5_EUCGR6.1e-12386.97Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01954 PE=4 SV=1[more]
BLAST of Cla005539 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444755|ref|XP_004140139.1|2.6e-13598.08PREDICTED: V-type proton ATPase subunit D [Cucumis sativus][more]
gi|659097220|ref|XP_008449506.1|1.0e-13497.70PREDICTED: V-type proton ATPase subunit D [Cucumis melo][more]
gi|823253409|ref|XP_012459327.1|9.4e-12588.12PREDICTED: V-type proton ATPase subunit D [Gossypium raimondii][more]
gi|590710312|ref|XP_007048793.1|2.1e-12488.89ATP synthase subunit d, putative isoform 1 [Theobroma cacao][more]
gi|1009126777|ref|XP_015880338.1|3.0e-12386.97PREDICTED: V-type proton ATPase subunit D [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002699V_ATPase_D
Vocabulary: Molecular Function
TermDefinition
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0055085 transmembrane transport
biological_process GO:1902600 hydrogen ion transmembrane transport
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0000325 plant-type vacuole
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0033176 proton-transporting V-type ATPase complex
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU07880watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU32594watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU53222watermelon EST collection version 2.0transcribed_cluster
WMU71023watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005539Cla005539.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU32594WMU32594transcribed_cluster
WMU07880WMU07880transcribed_cluster
WMU71023WMU71023transcribed_cluster
WMU53222WMU53222transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002699ATPase, V1 complex, subunit DPANTHERPTHR11671ATP SYNTHASE SUBUNIT Dcoord: 2..261
score: 2.8E
IPR002699ATPase, V1 complex, subunit DPFAMPF01813ATP-synt_Dcoord: 17..208
score: 4.6
IPR002699ATPase, V1 complex, subunit DTIGRFAMsTIGR00309TIGR00309coord: 9..211
score: 1.1
NoneNo IPR availablePANTHERPTHR11671:SF1V-TYPE PROTON ATPASE SUBUNIT Dcoord: 2..261
score: 2.8E