Cla005314 (gene) Watermelon (97103) v1

Overview
NameCla005314
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionEndoribonuclease L-PSP family protein (AHRD V1 **-- D7LAZ0_ARALL); contains Interpro domain(s) IPR006056 YjgF-like protein
LocationChr10 : 5908318 .. 5911098 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTACGCTCTCACTTTTCTGCCTTTTCCTTCGCTTTTTGTTTGGTCGTCGATCAATTTTTTGTTACGATTTGTTGATTACTTTTTTCTGTTGCCATTCTCTCGTTTTGCCGAAATCTCGATGGATTTTGTAGGGTTTAGTTTGTGTTTCAGCTGAGTAGTTATTAAAATTTTGAAATAGGGCCTTTCTATGCGATTAGGTTTAAGCTTGGTGAGGGAATGTCGATTGGTGTTCTTCCCCTTTCTAAGTAAGAAAATTTGCGATCATCGGAAAATTATAGTAGTTTGTTCGAAATGCAGAGATAATTTTGAGTTCTTTTCATCTTGAATTTAGAAACCTACTTATCATCAAGTATTGAAGATGTTATAGAATGGTATATTTCTCATAAAAGCTCCAGGGTGTTTGATGAGCGTGAATAATTAGTGAGGAACAAACTTAAGCACTGATATTTTAAATCTACAAAAATAATTGAAATGAAGATTTTTACGCGAAATTTAAAACTTGAATTTTATTACACAGCTTAAACAACTTATGAAAAAATGGGAGAGCTTTTTTCTTCTATAGTCTAGTTGGAGCGGAGCAAATAGTTCGTCTTTGAAGGCTCCTTTTTAGATATTGTAGAAGATAACTCTTCCTTGGGGGAACAATCGAATAGTTATTCTTTCCTAATTGTTTCTGTTGAATGTTTATAACTGATGCATAACCACTCGGTCCACCCCTTAATATCAACTTCTTGTGTAGCAGGTATCAAGGAAGCTGTTCAAACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCGGAGGTAGCTTCATCACTTTGTTATTGTTACTTTTTATTTGATTGTGCTTATGAGTAGATTAAGTGGGTTTTTGGATGCTGACCTGAGTATTGCTTGAAAGTTTGAATATTTTTCAATATTTGTAATGAATATTGAAAAAAGAAACATAAGGTTGAAGTGGTTTTCTGTGTGTGCGCACTTACGCATTATTAAGCTGCCTAATGGAATGTGCATTTTCATGTTCTATAATGTAGACAGGGAAATTCGTCTCAGATGATGTTGAAGACCAAACGGAGCAGGTATGTCCATTGATTATGGTGCCTGCTCGTATCATGTCCATGCAGATTAAACGTTTGAGCTGAATATAAAAAATTCTAAGTCAATGAAATTTACAGGTCCTCAAAAATATGGGTGAAATATTGAAAGCTGGAGGTGCTAGCTATTCTTCTGTGGTTAAGACAACTATTATGTATGAAATTCTGTCCTTTTTTCTTGATGTCCATAATATCTTTGCTCTGTTAATATCTAAAGAACTAGGGAGCTGTTTAGTAGTTGTTTAAAAAAATGGTTTTATGCTTTTGTCTACCCAACCATCACTACTTACAAGTTATTCTGATGTAAAGGTATGTTTACTCTGTTTATCCAACTTTCTGTCTTACCCTTCCAACATTGTAATAAAGATAATCTGTCTTTGTTATTAATTTTGTATAATTTATTCAACAGAAACTTGACAAAGTTTGTCTTTTGCCAATTTACTTGATGAGTAGATGTCCACGTGAACTACAATTTGAAGTTAAATCAAGATGTAGTAAGTCATATGTTGGTGTTCAAAATGGATGAAGACTTTCGTTAAATATAATTGAAAACTAATGTGGGTACTAGAACATTTGAAGTTCGGATACTTAAAAAAAACGAGTATGGAAATTTATGGACAAAAATAGAATTTAAACCTATTGCAAGAAATTGCCGTATGTTATCGGAGGACTACTTATAGATGATGTTTTCTTGACATTGTTTTCAACAAATAATTATTCTAAAAGTATTGAAAGCGACTCTCAGAACACTCCCATGTTTTTGTTGTGATTCAGTTTTTTCTTCACAATTTGTCTTGCAGGTTGGCAGATCTGAAGGATTTCAAGAAAGTTAATGAGATATATGGTAAATGTAAGTTTCGTTAAACTGAACCTCTACTCTCTCTATTATCAAATGCCGAGCATTTAGCTTTGATATCTGTATGATCTCTCTGTCTCCGTTACAGTTCAACTGTAGTATCTATAGTTTATTTGATTGAATTTTGAAACTTCACCGAAAAGTTGAACTTTTTGTTGGAACAATTTGTAACAATTTATATCATGTTTGGGAGTGATTTTAAAATCGTTAAAATCACTTTTGTCATTTTTAAAATCACACGAAAACACATTTTTAATCACTCAAAATTAAATTAGTTTTCAATTTTACACTTTTATACAATTTTCATATTGTCAAAATTAGTTTTGAAGGATTAAAGTGATTTTAGTAATTTTAAAATCTGTTAATAGTTTTCATTTACTGAAGGATAACTGAAGTAATGGTGAATTTATGATTCTATCTACGTTGCTTTGATATATTCTCTTGAGATGAGGATGTATTCTTCAAGCTCAAGTTCAGATGGTTTTCACTTTGTTGCAGATTTTCCGGCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAAGTCGAAATCGAGTGCATCGCTACACTTTGA

mRNA sequence

ATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTATCAAGGAAGCTGTTCAAACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCGGAGACAGGGAAATTCGTCTCAGATGATGTTGAAGACCAAACGGAGCAGGTCCTCAAAAATATGGGTGAAATATTGAAAGCTGGAGGTGCTAGCTATTCTTCTGTGGTTAAGACAACTATTATGTTGGCAGATCTGAAGGATTTCAAGAAAGTTAATGAGATATATGGTAAATATTTTCCGGCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAAGTCGAAATCGAGTGCATCGCTACACTTTGA

Coding sequence (CDS)

ATGGCTTGGTGTGCGGCTCGGACCTTTCACATGCCGGCGTTCGACGTCACTGCACTGCGCTCCAAGACTCCCTTGGTCGTCGGCGTCGGTTGCGTTTCGGTGGCCGGAACCACCTTGTGGCGATCTTCCTCAACTTCCAAGCCCCAAATACCCTTCGCATCCCTTGGCATTTCCACCAATACTAGTATCAAGGAAGCTGTTCAAACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCGGAGACAGGGAAATTCGTCTCAGATGATGTTGAAGACCAAACGGAGCAGGTCCTCAAAAATATGGGTGAAATATTGAAAGCTGGAGGTGCTAGCTATTCTTCTGTGGTTAAGACAACTATTATGTTGGCAGATCTGAAGGATTTCAAGAAAGTTAATGAGATATATGGTAAATATTTTCCGGCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAAGTCGAAATCGAGTGCATCGCTACACTTTGA

Protein sequence

MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTNTSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIECIATL
Homology
[Close]
BLAST of Cla005314 vs. Swiss-Prot
Match: RIDA_ARATH (Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana GN=RIDA PE=1 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.3e-67
Identity = 139/190 (73.16%), Postives = 154/190 (81.05%), Query Frame = 1 

Query: 1   MAWCAARTFHMPAFDV-TALRS-KTPLVV-GVGCVSVAGTTLWRSSSTSKPQIPFASLGI 60
           M W   R+ + P  D+ TALRS +TPLV  GVGC + AG +L+R SS S P   FASL +
Sbjct: 1   MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSSRSPP---FASLSV 60

Query: 61  STNTSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVL 120
           S ++  KE V T+KAPAALGPYSQAIKANNL+F+SGVLGL PETGKFVS+ VEDQTEQVL
Sbjct: 61  SASSVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVL 120

Query: 121 KNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDA 180
           KNMGEILKA GA YSSVVKTTIMLADL DFK VNEIY KYFPAP+PARSTYQVAALPL+A
Sbjct: 121 KNMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFPAPSPARSTYQVAALPLNA 180

Query: 181 KVEIECIATL 188
           K+EIECIATL
Sbjct: 181 KIEIECIATL 187

[Close]
BLAST of Cla005314 vs. Swiss-Prot
Match: UK114_MOUSE (Ribonuclease UK114 OS=Mus musculus GN=Hrsp12 PE=1 SV=3)

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-32
Identity = 65/123 (52.85%), Postives = 90/123 (73.17%), Query Frame = 1 

Query: 63  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGE 122
           I++ + T KAPAA+GPYSQA++ +  +++SG +GL+P +G+ V   V ++ +Q LKN+GE
Sbjct: 5   IRKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNLGE 64

Query: 123 ILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIE 182
           ILKA G  +++VVKTT++LAD+ DF  VNEIY  YF    PAR+ YQVAALP  ++VEIE
Sbjct: 65  ILKAAGCDFNNVVKTTVLLADMNDFGTVNEIYKTYFQGSLPARAAYQVAALPRGSRVEIE 124

Query: 183 CIA 186
            IA
Sbjct: 125 AIA 127

[Close]
BLAST of Cla005314 vs. Swiss-Prot
Match: UK114_HUMAN (Ribonuclease UK114 OS=Homo sapiens GN=HRSP12 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-32
Identity = 63/123 (51.22%), Postives = 90/123 (73.17%), Query Frame = 1 

Query: 63  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGE 122
           I+  + T KAP A+GPYSQA+  +  +++SG +G++P +G+ VS  V ++ +Q LKNMGE
Sbjct: 5   IRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGE 64

Query: 123 ILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIE 182
           ILKA G  +++VVKTT++LAD+ DF  VNEIY +YF +  PAR+ YQVAALP  +++EIE
Sbjct: 65  ILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAALPKGSRIEIE 124

Query: 183 CIA 186
            +A
Sbjct: 125 AVA 127

[Close]
BLAST of Cla005314 vs. Swiss-Prot
Match: YSD2_CAEEL (RutC family protein C23G10.2 OS=Caenorhabditis elegans GN=C23G10.2 PE=3 SV=3)

HSP 1 Score: 139.4 bits (350), Expect = 3.9e-32
Identity = 65/122 (53.28%), Postives = 90/122 (73.77%), Query Frame = 1 

Query: 64  KEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGEI 123
           ++ + +  AP A+GPYSQA++A N +++SG LGL+P+TG  + + V +QT Q LKN+GE+
Sbjct: 41  RQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGD-LKEGVVEQTHQSLKNLGEV 100

Query: 124 LKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIEC 183
           LKA GA Y +VVKTT++L ++ DF  VNE+YG+YF +P PAR+ YQVAALP    VEIE 
Sbjct: 101 LKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLVEIEA 160

Query: 184 IA 186
           +A
Sbjct: 161 VA 161

[Close]
BLAST of Cla005314 vs. Swiss-Prot
Match: UK114_RAT (Ribonuclease UK114 OS=Rattus norvegicus GN=Hrsp12 PE=1 SV=3)

HSP 1 Score: 136.3 bits (342), Expect = 3.3e-31
Identity = 63/123 (51.22%), Postives = 88/123 (71.54%), Query Frame = 1 

Query: 63  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGE 122
           I++ + T KAPAA+G YSQA+  +  ++VSG +G++P +G+ V   V ++ +Q LKN+GE
Sbjct: 5   IRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGE 64

Query: 123 ILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEIE 182
           ILKA G  +++VVKTT++LAD+ DF  VNEIY  YF    PAR+ YQVAALP  +++EIE
Sbjct: 65  ILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGNLPARAAYQVAALPKGSRIEIE 124

Query: 183 CIA 186
            IA
Sbjct: 125 AIA 127

[Close]
BLAST of Cla005314 vs. TrEMBL
Match: A0A0A0L2Z6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077580 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 7.3e-94
Identity = 177/187 (94.65%), Postives = 183/187 (97.86%), Query Frame = 1 

Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 60
           MAWCAARTFHMPAFDVTALRSK+PL VGVGCVSVAGTTLWRSSSTSK QIPFASLGIST+
Sbjct: 1   MAWCAARTFHMPAFDVTALRSKSPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTS 60

Query: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           +SIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM
Sbjct: 61  SSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 180
           GEILKAGG+SYSSVVKTTIMLADLKDFKKVNEIY KYFP+PAPARSTY+VA LPLDAKVE
Sbjct: 121 GEILKAGGSSYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYEVARLPLDAKVE 180

Query: 181 IECIATL 188
           IECIATL
Sbjct: 181 IECIATL 187

[Close]
BLAST of Cla005314 vs. TrEMBL
Match: W9R0G1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017847 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.9e-79
Identity = 155/188 (82.45%), Postives = 170/188 (90.43%), Query Frame = 1 

Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVV-GVGCVSVAGTTLWRSSSTSKPQIPFASLGIST 60
           MAWCAARTF+MPA ++ ALR +TPL   GVGC S+AG+TLWRSSS SK   PFA LGIST
Sbjct: 1   MAWCAARTFNMPAAEMGALRGRTPLAAAGVGCASLAGSTLWRSSS-SKRSAPFACLGIST 60

Query: 61  NTSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKN 120
           ++  KEAV+T+KAPAALGPYSQAIKANN L+VSGVLGL PETGKF+SD+VEDQTEQVLKN
Sbjct: 61  DSRSKEAVKTEKAPAALGPYSQAIKANNFLYVSGVLGLIPETGKFISDNVEDQTEQVLKN 120

Query: 121 MGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKV 180
           MGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIY KYFP+PAPARSTYQVAALPLDAK+
Sbjct: 121 MGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYQVAALPLDAKI 180

Query: 181 EIECIATL 188
           EIECIA L
Sbjct: 181 EIECIAAL 187

[Close]
BLAST of Cla005314 vs. TrEMBL
Match: A0A151U2B8_CAJCA (Ribonuclease UK114 family OS=Cajanus cajan GN=KK1_006029 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 3.3e-78
Identity = 148/186 (79.57%), Postives = 165/186 (88.71%), Query Frame = 1 

Query: 2   AWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTNT 61
           +WC+AR FH+PA D  A RS+  L  GVGC+SVAGT+ WRSSS+ K  +PF  L IS++T
Sbjct: 3   SWCSARCFHIPAMDAGAFRSRASLAAGVGCLSVAGTSFWRSSSSPKRSLPFTCLSISSDT 62

Query: 62  SIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMG 121
            IKE+VQT+ APAALGPYSQAIK+NNLLFVSGVLGL PETGKFVSD+VEDQTEQ+LKNMG
Sbjct: 63  RIKESVQTEGAPAALGPYSQAIKSNNLLFVSGVLGLVPETGKFVSDNVEDQTEQLLKNMG 122

Query: 122 EILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEI 181
           EILKAGGASYSSVVKTTIMLADLKDFKKVNEIY KYFP+P PARSTYQVAALPLDAK+EI
Sbjct: 123 EILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPFPARSTYQVAALPLDAKIEI 182

Query: 182 ECIATL 188
           ECIATL
Sbjct: 183 ECIATL 188

[Close]
BLAST of Cla005314 vs. TrEMBL
Match: D7T8C3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00390 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 4.3e-78
Identity = 155/188 (82.45%), Postives = 167/188 (88.83%), Query Frame = 1 

Query: 1   MAW-CAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGIST 60
           MAW  AARTF+MPA DV ALR + PL VG+GC SVA T+LWRSSS+S    P A L IST
Sbjct: 1   MAWSAAARTFNMPAIDVGALRRRGPLAVGIGCASVATTSLWRSSSSSLRSKPLACLSIST 60

Query: 61  NTSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKN 120
           +TSIK+AVQTDKAPAALGPYSQAIKANNL+FVSGVLGL PETGKF+SD+VEDQTEQVLKN
Sbjct: 61  DTSIKQAVQTDKAPAALGPYSQAIKANNLVFVSGVLGLIPETGKFISDNVEDQTEQVLKN 120

Query: 121 MGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKV 180
           MGEILKA GASYSSVVKTTIMLADLKDFKKVNEIY KYF APAPARSTYQVAALPLDA++
Sbjct: 121 MGEILKASGASYSSVVKTTIMLADLKDFKKVNEIYAKYFHAPAPARSTYQVAALPLDARI 180

Query: 181 EIECIATL 188
           EIECIA L
Sbjct: 181 EIECIAAL 188

[Close]
BLAST of Cla005314 vs. TrEMBL
Match: C6T4P6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G291100 PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 3.7e-77
Identity = 145/186 (77.96%), Postives = 166/186 (89.25%), Query Frame = 1 

Query: 2   AWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTNT 61
           +WC AR+F +PA + +ALR++  L  GVGC+SVAGT+ WRSSS+ K  +PF  L IS++T
Sbjct: 3   SWCGARSFQIPAMEDSALRNRASLAAGVGCLSVAGTSFWRSSSSPKRSLPFTCLSISSDT 62

Query: 62  SIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMG 121
            IKE+VQT+ APAALGPYSQAIK+NNL+FVSGVLGL PETGKFVSDDVEDQTEQ+LKNMG
Sbjct: 63  RIKESVQTEGAPAALGPYSQAIKSNNLIFVSGVLGLVPETGKFVSDDVEDQTEQLLKNMG 122

Query: 122 EILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEI 181
           EILKAGGASYSSVVKTTIMLADLKDFKKVNEIY KYFP+P PARSTYQVAALPLDAK+EI
Sbjct: 123 EILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPFPARSTYQVAALPLDAKIEI 182

Query: 182 ECIATL 188
           ECIAT+
Sbjct: 183 ECIATI 188

[Close]
BLAST of Cla005314 vs. NCBI nr
Match: gi|659126883|ref|XP_008463412.1| (PREDICTED: ribonuclease UK114-like [Cucumis melo])

HSP 1 Score: 354.4 bits (908), Expect = 1.2e-94
Identity = 179/187 (95.72%), Postives = 184/187 (98.40%), Query Frame = 1 

Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 60
           MAWCA R+FHMPAFDVTALRSKTPL VGVGCVSVAGTTLWRSSSTSK QIPFASLGIST+
Sbjct: 1   MAWCATRSFHMPAFDVTALRSKTPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTS 60

Query: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           +SIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSD+VEDQTEQVLKNM
Sbjct: 61  SSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 180
           GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFP+PAPARSTYQVAALPLDAKVE
Sbjct: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPSPAPARSTYQVAALPLDAKVE 180

Query: 181 IECIATL 188
           IECIATL
Sbjct: 181 IECIATL 187

[Close]
BLAST of Cla005314 vs. NCBI nr
Match: gi|449470455|ref|XP_004152932.1| (PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 1.1e-93
Identity = 177/187 (94.65%), Postives = 183/187 (97.86%), Query Frame = 1 

Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 60
           MAWCAARTFHMPAFDVTALRSK+PL VGVGCVSVAGTTLWRSSSTSK QIPFASLGIST+
Sbjct: 1   MAWCAARTFHMPAFDVTALRSKSPLAVGVGCVSVAGTTLWRSSSTSKRQIPFASLGISTS 60

Query: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           +SIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM
Sbjct: 61  SSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 180
           GEILKAGG+SYSSVVKTTIMLADLKDFKKVNEIY KYFP+PAPARSTY+VA LPLDAKVE
Sbjct: 121 GEILKAGGSSYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYEVARLPLDAKVE 180

Query: 181 IECIATL 188
           IECIATL
Sbjct: 181 IECIATL 187

[Close]
BLAST of Cla005314 vs. NCBI nr
Match: gi|1009110922|ref|XP_015898337.1| (PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 310.8 bits (795), Expect = 1.6e-81
Identity = 156/187 (83.42%), Postives = 170/187 (90.91%), Query Frame = 1 

Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTN 60
           MAWCAARTF++PA DV ALR++ PL VGVG  SVAG+ +WRSSS+ K   PFA LGIST+
Sbjct: 1   MAWCAARTFNVPAIDVGALRTRAPLAVGVGFASVAGSNIWRSSSSMKRSAPFACLGISTD 60

Query: 61  TSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNM 120
           T IKEAV+TDKAPAALGPYSQAIKANN L+VSGVLGL PETGKFVSD+VEDQTEQVLKNM
Sbjct: 61  TRIKEAVKTDKAPAALGPYSQAIKANNFLYVSGVLGLIPETGKFVSDNVEDQTEQVLKNM 120

Query: 121 GEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVE 180
           GEILKAGGA YSSVVKTTIMLADLKDFKKVNEIY KYFP+PAPARSTYQVAALPLDAK+E
Sbjct: 121 GEILKAGGAGYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYQVAALPLDAKIE 180

Query: 181 IECIATL 188
           IECIA+L
Sbjct: 181 IECIASL 187

[Close]
BLAST of Cla005314 vs. NCBI nr
Match: gi|703083218|ref|XP_010092158.1| (hypothetical protein L484_017847 [Morus notabilis])

HSP 1 Score: 302.4 bits (773), Expect = 5.6e-79
Identity = 155/188 (82.45%), Postives = 170/188 (90.43%), Query Frame = 1 

Query: 1   MAWCAARTFHMPAFDVTALRSKTPLVV-GVGCVSVAGTTLWRSSSTSKPQIPFASLGIST 60
           MAWCAARTF+MPA ++ ALR +TPL   GVGC S+AG+TLWRSSS SK   PFA LGIST
Sbjct: 1   MAWCAARTFNMPAAEMGALRGRTPLAAAGVGCASLAGSTLWRSSS-SKRSAPFACLGIST 60

Query: 61  NTSIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKN 120
           ++  KEAV+T+KAPAALGPYSQAIKANN L+VSGVLGL PETGKF+SD+VEDQTEQVLKN
Sbjct: 61  DSRSKEAVKTEKAPAALGPYSQAIKANNFLYVSGVLGLIPETGKFISDNVEDQTEQVLKN 120

Query: 121 MGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKV 180
           MGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIY KYFP+PAPARSTYQVAALPLDAK+
Sbjct: 121 MGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPAPARSTYQVAALPLDAKI 180

Query: 181 EIECIATL 188
           EIECIA L
Sbjct: 181 EIECIAAL 187

[Close]
BLAST of Cla005314 vs. NCBI nr
Match: gi|1012362221|gb|KYP73404.1| (Ribonuclease UK114 family [Cajanus cajan])

HSP 1 Score: 299.3 bits (765), Expect = 4.7e-78
Identity = 148/186 (79.57%), Postives = 165/186 (88.71%), Query Frame = 1 

Query: 2   AWCAARTFHMPAFDVTALRSKTPLVVGVGCVSVAGTTLWRSSSTSKPQIPFASLGISTNT 61
           +WC+AR FH+PA D  A RS+  L  GVGC+SVAGT+ WRSSS+ K  +PF  L IS++T
Sbjct: 3   SWCSARCFHIPAMDAGAFRSRASLAAGVGCLSVAGTSFWRSSSSPKRSLPFTCLSISSDT 62

Query: 62  SIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMG 121
            IKE+VQT+ APAALGPYSQAIK+NNLLFVSGVLGL PETGKFVSD+VEDQTEQ+LKNMG
Sbjct: 63  RIKESVQTEGAPAALGPYSQAIKSNNLLFVSGVLGLVPETGKFVSDNVEDQTEQLLKNMG 122

Query: 122 EILKAGGASYSSVVKTTIMLADLKDFKKVNEIYGKYFPAPAPARSTYQVAALPLDAKVEI 181
           EILKAGGASYSSVVKTTIMLADLKDFKKVNEIY KYFP+P PARSTYQVAALPLDAK+EI
Sbjct: 123 EILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPSPFPARSTYQVAALPLDAKIEI 182

Query: 182 ECIATL 188
           ECIATL
Sbjct: 183 ECIATL 188

The following BLAST results are available for this feature:
BLAST of Cla005314 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RIDA_ARATH1.3e-6773.16Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana GN=RIDA... [more]
UK114_MOUSE1.8e-3252.85Ribonuclease UK114 OS=Mus musculus GN=Hrsp12 PE=1 SV=3[more]
UK114_HUMAN1.8e-3251.22Ribonuclease UK114 OS=Homo sapiens GN=HRSP12 PE=1 SV=1[more]
YSD2_CAEEL3.9e-3253.28RutC family protein C23G10.2 OS=Caenorhabditis elegans GN=C23G10.2 PE=3 SV=3[more]
UK114_RAT3.3e-3151.22Ribonuclease UK114 OS=Rattus norvegicus GN=Hrsp12 PE=1 SV=3[more]
BLAST of Cla005314 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2Z6_CUCSA7.3e-9494.65Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077580 PE=4 SV=1[more]
W9R0G1_9ROSA3.9e-7982.45Uncharacterized protein OS=Morus notabilis GN=L484_017847 PE=4 SV=1[more]
A0A151U2B8_CAJCA3.3e-7879.57Ribonuclease UK114 family OS=Cajanus cajan GN=KK1_006029 PE=4 SV=1[more]
D7T8C3_VITVI4.3e-7882.45Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00390 PE=4 SV=... [more]
C6T4P6_SOYBN3.7e-7777.96Uncharacterized protein OS=Glycine max GN=GLYMA_02G291100 PE=2 SV=1[more]
BLAST of Cla005314 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659126883|ref|XP_008463412.1|1.2e-9495.72PREDICTED: ribonuclease UK114-like [Cucumis melo][more]
gi|449470455|ref|XP_004152932.1|1.1e-9394.65PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Cucumis sativus][more]
gi|1009110922|ref|XP_015898337.1|1.6e-8183.42PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Ziziphus jujuba][more]
gi|703083218|ref|XP_010092158.1|5.6e-7982.45hypothetical protein L484_017847 [Morus notabilis][more]
gi|1012362221|gb|KYP73404.1|4.7e-7879.57Ribonuclease UK114 family [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006056RidA
IPR006175YjgF/YER057c/UK114
IPR013813Endoribonuclease L-PSP/chorismate mutase-like
IPR019897RidA_CS
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009082 branched-chain amino acid biosynthetic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0006096 glycolytic process
biological_process GO:0009651 response to salt stress
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009579 thylakoid
cellular_component GO:0005773 vacuole
molecular_function GO:0019239 deaminase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0046982 protein heterodimerization activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU19263watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU35321watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU38795watermelon unigene v2 vs TrEMBLtranscribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005314Cla005314.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU38795WMU38795transcribed_cluster
WMU35321WMU35321transcribed_cluster
WMU19263WMU19263transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006056RidA familyTIGRFAMsTIGR00004TIGR00004coord: 64..186
score: 1.2
IPR006175YjgF/YER057c/UK114 familyPANTHERPTHR11803TRANSLATION INITIATION INHIBITORcoord: 18..187
score: 2.6
IPR006175YjgF/YER057c/UK114 familyPFAMPF01042Ribonuc_L-PSPcoord: 70..186
score: 2.7
IPR013813Endoribonuclease L-PSP/chorismate mutase-likeGENE3DG3DSA:3.30.1330.40coord: 64..186
score: 2.6
IPR013813Endoribonuclease L-PSP/chorismate mutase-likeunknownSSF55298YjgF-likecoord: 64..187
score: 2.04
IPR019897RidA, conserved sitePROSITEPS01094UPF0076coord: 163..181
scor
NoneNo IPR availablePANTHERPTHR11803:SF13RIBONUCLEASE UK114coord: 18..187
score: 2.6