Cla005285 (gene) Watermelon (97103) v1

Overview
NameCla005285
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionCOBRA-like protein (AHRD V1 ***- Q655F2_ORYSJ)
LocationChr10 : 6233905 .. 6234543 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATTTCCAACGCGAGTTTTGATCTCTGTTTTTTTCCTTATTTCCCTTCTTGTTTTTTCCAATTTTTCTTTCTGTTCTGCACAAGACTATATCATTGGCGGCGGCGGCGGGGGCGGGGACGACGACCAGGCGAAGCCAGCGGCGCCACCGCCGGAGCAGAATGACTGTAATGGGATATTCTTGTCCTATACATTTATTTCGCGTGAGAAGGAGCTGCCACGGCTGAAGAACGCGACGGCTCAGTCATGGGCATTCAAGTCGGAGGCGTTGATTCTGAATGCGGGATCGACGGAGCTGAAGGCATGGAAGATGTTCATCGGATTTCACCACCGGGAAATCCTGGTGTCGGCGGCTGGCGCGGTGGTGATGGATGGGTCGGATTTCCCTGTGGACGTTGGGAATGGAACCACTTTGGCTGGGTACCCCATGACGGATCTGAAAACGTCGATTGAAACCGCGGGAGATATTAATCAGATTCAGGCGACGGTGGAGCTGACAGGAACGCAGTTCGGAATCAAGCCGCCTGGTGTTCCGATGCCAAAGACGATTCGCCTTGTTAACGATGGATTTAAGTGCCCTGCGCCTCGCCGTCGCGGTATCCTTATTCAACTTTCAAACTCCCCTCATTACAATTAG

mRNA sequence

ATGCAATTTCCAACGCGAGTTTTGATCTCTGTTTTTTTCCTTATTTCCCTTCTTGTTTTTTCCAATTTTTCTTTCTGTTCTGCACAAGACTATATCATTGGCGGCGGCGGCGGGGGCGGGGACGACGACCAGGCGAAGCCAGCGGCGCCACCGCCGGAGCAGAATGACTGTAATGGGATATTCTTGTCCTATACATTTATTTCGCGTGAGAAGGAGCTGCCACGGCTGAAGAACGCGACGGCTCAGTCATGGGCATTCAAGTCGGAGGCGTTGATTCTGAATGCGGGATCGACGGAGCTGAAGGCATGGAAGATGTTCATCGGATTTCACCACCGGGAAATCCTGGTGTCGGCGGCTGGCGCGGTGGTGATGGATGGGTCGGATTTCCCTGTGGACGTTGGGAATGGAACCACTTTGGCTGGGTACCCCATGACGGATCTGAAAACGTCGATTGAAACCGCGGGAGATATTAATCAGATTCAGGCGACGGTGGAGCTGACAGGAACGCAGTTCGGAATCAAGCCGCCTGGTGTTCCGATGCCAAAGACGATTCGCCTTGTTAACGATGGATTTAAGTGCCCTGCGCCTCGCCGTCGCGGTATCCTTATTCAACTTTCAAACTCCCCTCATTACAATTAG

Coding sequence (CDS)

ATGCAATTTCCAACGCGAGTTTTGATCTCTGTTTTTTTCCTTATTTCCCTTCTTGTTTTTTCCAATTTTTCTTTCTGTTCTGCACAAGACTATATCATTGGCGGCGGCGGCGGGGGCGGGGACGACGACCAGGCGAAGCCAGCGGCGCCACCGCCGGAGCAGAATGACTGTAATGGGATATTCTTGTCCTATACATTTATTTCGCGTGAGAAGGAGCTGCCACGGCTGAAGAACGCGACGGCTCAGTCATGGGCATTCAAGTCGGAGGCGTTGATTCTGAATGCGGGATCGACGGAGCTGAAGGCATGGAAGATGTTCATCGGATTTCACCACCGGGAAATCCTGGTGTCGGCGGCTGGCGCGGTGGTGATGGATGGGTCGGATTTCCCTGTGGACGTTGGGAATGGAACCACTTTGGCTGGGTACCCCATGACGGATCTGAAAACGTCGATTGAAACCGCGGGAGATATTAATCAGATTCAGGCGACGGTGGAGCTGACAGGAACGCAGTTCGGAATCAAGCCGCCTGGTGTTCCGATGCCAAAGACGATTCGCCTTGTTAACGATGGATTTAAGTGCCCTGCGCCTCGCCGTCGCGGTATCCTTATTCAACTTTCAAACTCCCCTCATTACAATTAG

Protein sequence

MQFPTRVLISVFFLISLLVFSNFSFCSAQDYIIGGGGGGGDDDQAKPAAPPPEQNDCNGIFLSYTFISREKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVSAAGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPMPKTIRLVNDGFKCPAPRRRGILIQLSNSPHYN
Homology
[Close]
BLAST of Cla005285 vs. Swiss-Prot
Match: CBL10_ARATH (COBRA-like protein 10 OS=Arabidopsis thaliana GN=COBL10 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 9.9e-56
Identity = 112/196 (57.14%), Postives = 134/196 (68.37%), Query Frame = 1 

Query: 6   RVLISVF-FLISLLVFSNFSFCSAQDYIIGGGGGGGDDDQAKPAAPPPEQNDCNGIFLSY 65
           R  +S+F FL S+L  SN      QDY + G  GGG       A PPPE   CNGIF+SY
Sbjct: 17  RYSLSLFIFLSSILFLSN-----GQDYGMPGEDGGGG------AEPPPEMAHCNGIFMSY 76

Query: 66  TFISREKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVSAAGAVVM 125
            F SRE+E P +KN TAQSWAFKS A+I+NAG  ELK W+MFIGF H+E++VSA GA  M
Sbjct: 77  NFGSREREYPHVKNVTAQSWAFKSTAMIVNAGREELKGWQMFIGFRHKELIVSATGATPM 136

Query: 126 DGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPMPKTI 185
           DG D+P+D  NGTT  G P  DLKTSIETAGD  QI A +E+TGT FG+     PMP+TI
Sbjct: 137 DG-DYPLDASNGTTFVGSPNMDLKTSIETAGDFTQISANIEITGTLFGVSKAVTPMPRTI 196

Query: 186 RLVNDGFKCPAPRRRG 201
           +L NDG++CPA +R+G
Sbjct: 197 KLTNDGWECPAAKRKG 200

[Close]
BLAST of Cla005285 vs. Swiss-Prot
Match: CBL11_ARATH (COBRA-like protein 11 OS=Arabidopsis thaliana GN=COBL11 PE=2 SV=2)

HSP 1 Score: 189.9 bits (481), Expect = 2.9e-47
Identity = 101/195 (51.79%), Postives = 123/195 (63.08%), Query Frame = 1 

Query: 14  LISLLVFSNFSFCS---AQDYIIGGGGGGGDDDQAKPAAPPPEQNDCNGIFLSYTFISRE 73
           L+ LL   N  F +   AQDY          D+  K   PPP    CNG+++SY+   RE
Sbjct: 12  LLLLLPLINLQFPTLSLAQDY----------DEPKKDDTPPPGLARCNGVYMSYSSGGRE 71

Query: 74  KELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVSAAGAVVMDGSDFP 133
           K  PR  NATAQ+W+FKS A+I+N G  E+K W+MF+GFHHREI+VSA GAV  DG DFP
Sbjct: 72  KLYPRTTNATAQAWSFKSTAMIVNTGIEEVKGWQMFVGFHHREIIVSATGAVSSDG-DFP 131

Query: 134 VDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPMPKTIRLVNDG 193
           VD  NGTT  G   TDLKTSI TAGD  QI   +E+TGT FG K    PMPK+I+L NDG
Sbjct: 132 VDATNGTTFIGSQNTDLKTSILTAGDYTQISTNIEITGTVFGGKGTATPMPKSIKLTNDG 191

Query: 194 FKCPAPRRRGILIQL 206
           ++CPA   +G  +Q+
Sbjct: 192 WQCPAATSKGGTMQV 195

[Close]
BLAST of Cla005285 vs. Swiss-Prot
Match: COBL8_ARATH (COBRA-like protein 8 OS=Arabidopsis thaliana GN=COBL8 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.8e-42
Identity = 85/167 (50.90%), Postives = 112/167 (67.07%), Query Frame = 1 

Query: 50  PPPEQND---CNGIFLSYTFISREKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMF 109
           PPP   D   CNG+F+SYT+++  K  P   +   Q + F+SE  +LN G  ELK+W++F
Sbjct: 30  PPPRSKDADLCNGVFVSYTYLTGTKIKPN--DTKNQPYRFESEITVLNNGRDELKSWQVF 89

Query: 110 IGFHHREILVSAAGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVEL 169
           + F HREILVSA  AV+ DGS  P  V NGT  AG+P  DLKT+I TAGD+ Q++A VEL
Sbjct: 90  VKFAHREILVSATNAVLSDGSSLPASVENGTIFAGFPSADLKTAIMTAGDVTQMEARVEL 149

Query: 170 TGTQFGIKPPGVPMPKTIRLVNDGFKCPAPRRRGI-LIQLSNSPHYN 213
            GTQFG+ PP VP+PK I LVNDG+ CP P ++G  ++Q+  +P+ N
Sbjct: 150 VGTQFGVAPPSVPLPKNITLVNDGWSCPKPTQQGSNVLQVCCTPNPN 194

[Close]
BLAST of Cla005285 vs. Swiss-Prot
Match: COBL7_ARATH (COBRA-like protein 7 OS=Arabidopsis thaliana GN=COBL7 PE=1 SV=2)

HSP 1 Score: 169.9 bits (429), Expect = 3.1e-41
Identity = 85/162 (52.47%), Postives = 108/162 (66.67%), Query Frame = 1 

Query: 41  DDDQAKPAAPPPEQND-CNGIFLSYTFISREKELPRLKNATA-QSWAFKSEALILNAGST 100
           D +   P+  PP  +D CNG+F+SYT     K  P   N TA Q + F+S   +LN G  
Sbjct: 29  DANTTNPSPSPPSDSDLCNGVFVSYTHTKGSKIPP---NDTANQPYRFESVITVLNHGRD 88

Query: 101 ELKAWKMFIGFHHREILVSAAGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDIN 160
           ELK+W++F+ F HREILVSA+ AV+ DGS  PV V NGT  AGYP +DLK++I+TAGD+ 
Sbjct: 89  ELKSWRVFVKFAHREILVSASNAVLSDGSSLPVSVENGTVFAGYPSSDLKSAIQTAGDVT 148

Query: 161 QIQATVELTGTQFGIKPPGVPMPKTIRLVNDGFKCPAPRRRG 201
           Q+QA VEL GTQFG+ PP VP+PK I L  DG+KCP   ++G
Sbjct: 149 QMQARVELVGTQFGVAPPNVPLPKNITLATDGWKCPKATQKG 187

[Close]
BLAST of Cla005285 vs. Swiss-Prot
Match: COBL9_ARATH (COBRA-like protein 9 OS=Arabidopsis thaliana GN=COBL9 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 9.3e-38
Identity = 79/152 (51.97%), Postives = 102/152 (67.11%), Query Frame = 1 

Query: 47  PAAPPPEQND-CNGIFLSYTFISREKELPRLKNATA-QSWAFKSEALILNAGSTELKAWK 106
           PA  P   +D CNGIFLSY FI   K  P   N TA Q + F+S   +LN G  ELK W+
Sbjct: 34  PAPAPISPSDLCNGIFLSYDFILGRKIPP---NDTADQPYRFESVLTVLNNGREELKEWR 93

Query: 107 MFIGFHHREILVSAAGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATV 166
           +F+GF H EIL+SA  A++++G++ P  VGNGT   GYP++DLKT+I+TAGD+ Q+ A +
Sbjct: 94  VFVGFQHNEILISATDALIVNGTELPALVGNGTIFGGYPVSDLKTAIQTAGDLKQMTAEI 153

Query: 167 ELTGTQFGIKPPGVPMPKTIRLVNDGFKCPAP 197
           EL GTQF + PP VP+P  I LVN+G+ CP P
Sbjct: 154 ELVGTQFMVAPPAVPLPSNISLVNEGWLCPVP 182

[Close]
BLAST of Cla005285 vs. TrEMBL
Match: A0A0A0L312_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G078790 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 2.8e-97
Identity = 180/203 (88.67%), Postives = 184/203 (90.64%), Query Frame = 1 

Query: 1   MQFPTRVLISVFFLISLLVFSNFSFCSAQDYIIGGGGGGG---DDDQAKPAAPPPEQNDC 60
           MQFP     SV  LISLL+FSNFS C +QDYIIGGGGGGG   DDD+AKPAAPPPEQN C
Sbjct: 1   MQFPMPHFFSVSLLISLLLFSNFSLCFSQDYIIGGGGGGGGGDDDDEAKPAAPPPEQNQC 60

Query: 61  NGIFLSYTFISREKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVS 120
           NGIFLSYTFISREKELPRLKNATAQSWAFKSEA+ILNAG TELKAWKMFIGFHH EILVS
Sbjct: 61  NGIFLSYTFISREKELPRLKNATAQSWAFKSEAVILNAGLTELKAWKMFIGFHHHEILVS 120

Query: 121 AAGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPG 180
           A GAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVE TGTQFGIKPPG
Sbjct: 121 ANGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVEFTGTQFGIKPPG 180

Query: 181 VPMPKTIRLVNDGFKCPAPRRRG 201
           VPMPKTIRL NDGFKCPAPR RG
Sbjct: 181 VPMPKTIRLENDGFKCPAPRHRG 203

[Close]
BLAST of Cla005285 vs. TrEMBL
Match: A0A0A0L8A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G423810 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 7.1e-69
Identity = 123/191 (64.40%), Postives = 152/191 (79.58%), Query Frame = 1 

Query: 8   LISVFFLISLLVFSNFSFCSAQDYIIGGGGGGGDDDQAKPAAPPPEQNDCNGIFLSYTFI 67
           LI   FL++ ++ S+   C +QDYIIGGG   G  D    A  PPEQN+CNGIFL+YTF 
Sbjct: 4   LIHTPFLLTFVLLSHLQLCFSQDYIIGGGASDGGGDSLPEAEAPPEQNECNGIFLTYTFF 63

Query: 68  SREKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVSAAGAVVMDGS 127
           SREKE P +KNA+AQ+WAF+++A +LNAG+TEL+ WKM+IGF HREILVSA+GAV++DGS
Sbjct: 64  SREKEFPHVKNASAQAWAFRAQATLLNAGTTELEGWKMYIGFQHREILVSASGAVLVDGS 123

Query: 128 DFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPMPKTIRLV 187
           DFP DVG G  LAGY  TDLKT+IETAGD NQ+Q T+++TGTQFG+K  G+PMPKTI L 
Sbjct: 124 DFPADVGKGVILAGYTQTDLKTAIETAGDYNQMQMTIDITGTQFGVKKNGIPMPKTIGLE 183

Query: 188 NDGFKCPAPRR 199
           N+GFKCP PRR
Sbjct: 184 NEGFKCPQPRR 194

[Close]
BLAST of Cla005285 vs. TrEMBL
Match: A0A059BVY2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03435 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.0e-63
Identity = 120/176 (68.18%), Postives = 136/176 (77.27%), Query Frame = 1 

Query: 26  CSAQDYIIGGGGGGGDDDQAKPAAPPPEQNDCNGIFLSYTFISREKELPRLKNATAQSWA 85
           C  QDY          +D + PAAPPPEQ  CNGIFL+Y F+ R KE PR+KNA+AQ+WA
Sbjct: 5   CHGQDY----------EDDSTPAAPPPEQESCNGIFLTYNFMERTKEYPRIKNASAQAWA 64

Query: 86  FKSEALILNAGSTELKAWKMFIGFHHREILVSAAGAVVMDGSDFPVDVG-NGTTLAGYPM 145
           FKS+  +LNAG  ELKAWK+F+GF H EILVSA GAV +DG D P  VG NGT  AGYP 
Sbjct: 65  FKSQMTVLNAGLEELKAWKVFVGFQHNEILVSAGGAVSIDGEDLPAKVGNNGTAFAGYPQ 124

Query: 146 TDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPMPKTIRLVNDGFKCPAPRRRG 201
            DLKTSI+TAGDINQIQA +ELTGTQFG+KPPGVPMPKTIRL NDG+KCPA RRRG
Sbjct: 125 ADLKTSIDTAGDINQIQAKIELTGTQFGVKPPGVPMPKTIRLQNDGYKCPAARRRG 170

[Close]
BLAST of Cla005285 vs. TrEMBL
Match: W9RRX7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011885 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 8.4e-62
Identity = 123/192 (64.06%), Postives = 141/192 (73.44%), Query Frame = 1 

Query: 13  FLISLLVFSNF---SFCSAQDYIIGGGGGGGDDDQAKP-AAPPPEQNDCNGIFLSYTFIS 72
           FL  +++ S F     C  QDY    GG        KP AAPPPE  DCNGIFLSYTFIS
Sbjct: 9   FLALIIIISTFWRVEICYGQDYDYNDGG--------KPKAAPPPEVQDCNGIFLSYTFIS 68

Query: 73  REKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVSAAGAVVMDGSD 132
           R KELP +KN +AQ+WAFK+EA +LNAG  ELKAWKMF+GF H EILVS  GAVVMDG D
Sbjct: 69  RVKELPHVKNVSAQAWAFKAEAAVLNAGKDELKAWKMFVGFQHDEILVSVDGAVVMDGGD 128

Query: 133 FPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPMPKTIRLVN 192
           FP+ VGNGT  +G+ + DLKT+IETAGD +QIQATV + GT FG+KP  VPMPKTIRL N
Sbjct: 129 FPMAVGNGTYFSGFSLADLKTAIETAGDYDQIQATVGIIGTMFGLKPKAVPMPKTIRLEN 188

Query: 193 DGFKCPAPRRRG 201
           DGF+CPAP R G
Sbjct: 189 DGFQCPAPHRHG 192

[Close]
BLAST of Cla005285 vs. TrEMBL
Match: E0CVL9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g00620 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.0e-59
Identity = 115/191 (60.21%), Postives = 143/191 (74.87%), Query Frame = 1 

Query: 6   RVLISVFFLISLLVFSNFSFCSAQDYIIGGGGGGGDDDQAKPAAPPPEQNDCNGIFLSYT 65
           R+L+ +FF+     F++  F  AQDY               P APPPE+ +C+GIF+SYT
Sbjct: 4   RLLVYMFFIS----FTSDQFIRAQDYT-----------DYVPPAPPPEEENCDGIFVSYT 63

Query: 66  FISREKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVSAAGAVVMD 125
           FISR+KE P +KNA+AQ+WAFK+ A +LNAG+ ELKAWK+FIGF H EILVSA GAVVM+
Sbjct: 64  FISRQKEFPHVKNASAQAWAFKAMATVLNAGTFELKAWKIFIGFQHDEILVSAGGAVVMN 123

Query: 126 GSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPMPKTIR 185
           G D P  VGNGT L+G+P TDLKTSIETAGD+ QI+  + +TGTQFG+KPPGVPMP+TI 
Sbjct: 124 GDDMPAAVGNGTYLSGFPQTDLKTSIETAGDLTQIEVQIPITGTQFGVKPPGVPMPRTIS 179

Query: 186 LVNDGFKCPAP 197
           L NDG+KCP P
Sbjct: 184 LANDGYKCPKP 179

[Close]
BLAST of Cla005285 vs. NCBI nr
Match: gi|449470463|ref|XP_004152936.1| (PREDICTED: COBRA-like protein 10 [Cucumis sativus])

HSP 1 Score: 362.8 bits (930), Expect = 4.0e-97
Identity = 180/203 (88.67%), Postives = 184/203 (90.64%), Query Frame = 1 

Query: 1   MQFPTRVLISVFFLISLLVFSNFSFCSAQDYIIGGGGGGG---DDDQAKPAAPPPEQNDC 60
           MQFP     SV  LISLL+FSNFS C +QDYIIGGGGGGG   DDD+AKPAAPPPEQN C
Sbjct: 1   MQFPMPHFFSVSLLISLLLFSNFSLCFSQDYIIGGGGGGGGGDDDDEAKPAAPPPEQNQC 60

Query: 61  NGIFLSYTFISREKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVS 120
           NGIFLSYTFISREKELPRLKNATAQSWAFKSEA+ILNAG TELKAWKMFIGFHH EILVS
Sbjct: 61  NGIFLSYTFISREKELPRLKNATAQSWAFKSEAVILNAGLTELKAWKMFIGFHHHEILVS 120

Query: 121 AAGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPG 180
           A GAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVE TGTQFGIKPPG
Sbjct: 121 ANGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVEFTGTQFGIKPPG 180

Query: 181 VPMPKTIRLVNDGFKCPAPRRRG 201
           VPMPKTIRL NDGFKCPAPR RG
Sbjct: 181 VPMPKTIRLENDGFKCPAPRHRG 203

[Close]
BLAST of Cla005285 vs. NCBI nr
Match: gi|659126984|ref|XP_008463461.1| (PREDICTED: COBRA-like protein 10 [Cucumis melo])

HSP 1 Score: 340.9 bits (873), Expect = 1.6e-90
Identity = 173/197 (87.82%), Postives = 177/197 (89.85%), Query Frame = 1 

Query: 9   ISVFFLISLLVFSNFSFCS--AQDYIIGGGGGGG---DDDQAKPAAPPPEQNDCNGIFLS 68
           IS  FL S   F    F S  +QDYIIGGGGGGG   DDD AKPAAPPPEQNDCNGIFLS
Sbjct: 19  ISSLFLFSFPFFFFPIFLSVFSQDYIIGGGGGGGGGDDDDDAKPAAPPPEQNDCNGIFLS 78

Query: 69  YTFISREKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVSAAGAVV 128
           YTFISREKELPRLKNATAQ+WAFKSEA+ILNAGSTELKAWKMFIGFHH EILVSA GAVV
Sbjct: 79  YTFISREKELPRLKNATAQAWAFKSEAVILNAGSTELKAWKMFIGFHHHEILVSANGAVV 138

Query: 129 MDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPMPKT 188
           MDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTG+QFGIKPPGVPMPKT
Sbjct: 139 MDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGSQFGIKPPGVPMPKT 198

Query: 189 IRLVNDGFKCPAPRRRG 201
           IRLVNDGFKCPAPR RG
Sbjct: 199 IRLVNDGFKCPAPRHRG 215

[Close]
BLAST of Cla005285 vs. NCBI nr
Match: gi|659109375|ref|XP_008454682.1| (PREDICTED: COBRA-like protein 10 [Cucumis melo])

HSP 1 Score: 274.6 bits (701), Expect = 1.4e-70
Identity = 127/194 (65.46%), Postives = 154/194 (79.38%), Query Frame = 1 

Query: 6   RVLISVFFLISLLVFSNFSFCSAQDYIIGGGGGGGDDDQAKPAAPPPEQNDCNGIFLSYT 65
           R LI   FL+  ++ SN   C +QDYIIGGG G G  D    A  PPEQN+CNGIFL+YT
Sbjct: 2   RCLIPTPFLLIFVLLSNLQLCFSQDYIIGGGAGDGAGDSPPEAGAPPEQNECNGIFLTYT 61

Query: 66  FISREKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVSAAGAVVMD 125
           F SREKE P +KNA+AQ+WAF+++A +LNAG+TEL+ WKM+IGF HREILVSA+GAV++D
Sbjct: 62  FFSREKEFPHVKNASAQAWAFRAQATLLNAGTTELEGWKMYIGFQHREILVSASGAVLVD 121

Query: 126 GSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPMPKTIR 185
           GSDFP DVG G  LAGY  TDLKT+IETAGD NQ+Q T+++TGTQFG+K  G+PMPKTIR
Sbjct: 122 GSDFPADVGKGVILAGYTQTDLKTAIETAGDYNQMQVTIDITGTQFGVKKNGIPMPKTIR 181

Query: 186 LVNDGFKCPAPRRR 200
           L N+GFKC  PRRR
Sbjct: 182 LENEGFKCRQPRRR 195

[Close]
BLAST of Cla005285 vs. NCBI nr
Match: gi|778688637|ref|XP_011652799.1| (PREDICTED: COBRA-like protein 10 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 1.0e-68
Identity = 123/191 (64.40%), Postives = 152/191 (79.58%), Query Frame = 1 

Query: 8   LISVFFLISLLVFSNFSFCSAQDYIIGGGGGGGDDDQAKPAAPPPEQNDCNGIFLSYTFI 67
           LI   FL++ ++ S+   C +QDYIIGGG   G  D    A  PPEQN+CNGIFL+YTF 
Sbjct: 4   LIHTPFLLTFVLLSHLQLCFSQDYIIGGGASDGGGDSLPEAEAPPEQNECNGIFLTYTFF 63

Query: 68  SREKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVSAAGAVVMDGS 127
           SREKE P +KNA+AQ+WAF+++A +LNAG+TEL+ WKM+IGF HREILVSA+GAV++DGS
Sbjct: 64  SREKEFPHVKNASAQAWAFRAQATLLNAGTTELEGWKMYIGFQHREILVSASGAVLVDGS 123

Query: 128 DFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPMPKTIRLV 187
           DFP DVG G  LAGY  TDLKT+IETAGD NQ+Q T+++TGTQFG+K  G+PMPKTI L 
Sbjct: 124 DFPADVGKGVILAGYTQTDLKTAIETAGDYNQMQMTIDITGTQFGVKKNGIPMPKTIGLE 183

Query: 188 NDGFKCPAPRR 199
           N+GFKCP PRR
Sbjct: 184 NEGFKCPQPRR 194

[Close]
BLAST of Cla005285 vs. NCBI nr
Match: gi|720038113|ref|XP_010267880.1| (PREDICTED: COBRA-like protein 10 [Nelumbo nucifera])

HSP 1 Score: 266.2 bits (679), Expect = 5.0e-68
Identity = 131/199 (65.83%), Postives = 153/199 (76.88%), Query Frame = 1 

Query: 1   MQFPTRVLISVFFLISLLVFSNFSFCSAQDYIIGGGGGGGDDDQAKPAAPPPEQNDCNGI 60
           M+   + L+ VFFL S  ++       AQDY         D+ + +PAAPPPEQ  CNGI
Sbjct: 1   MKMAWKALVFVFFLFSYQLYLG----GAQDY---------DEPEPEPAAPPPEQEHCNGI 60

Query: 61  FLSYTFISREKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVSAAG 120
           FLSY FISREKE PR+KNATAQ+WAFKS A +LNAGS ELKAWK+FIGF H E+LVSA G
Sbjct: 61  FLSYVFISREKEYPRVKNATAQAWAFKSMATVLNAGSYELKAWKIFIGFQHDEVLVSATG 120

Query: 121 AVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPM 180
           AV++DG DFP  VGNGT LAG   TDLKTSI+TAGDINQIQ  +E+TGTQFG+KPPG+PM
Sbjct: 121 AVIVDGDDFPAAVGNGTYLAGNSQTDLKTSIDTAGDINQIQVQIEMTGTQFGVKPPGIPM 180

Query: 181 PKTIRLVNDGFKCPAPRRR 200
           PKTI+LVNDG+KCPAP RR
Sbjct: 181 PKTIQLVNDGYKCPAPTRR 186

The following BLAST results are available for this feature:
BLAST of Cla005285 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CBL10_ARATH9.9e-5657.14COBRA-like protein 10 OS=Arabidopsis thaliana GN=COBL10 PE=2 SV=1[more]
CBL11_ARATH2.9e-4751.79COBRA-like protein 11 OS=Arabidopsis thaliana GN=COBL11 PE=2 SV=2[more]
COBL8_ARATH4.8e-4250.90COBRA-like protein 8 OS=Arabidopsis thaliana GN=COBL8 PE=2 SV=1[more]
COBL7_ARATH3.1e-4152.47COBRA-like protein 7 OS=Arabidopsis thaliana GN=COBL7 PE=1 SV=2[more]
COBL9_ARATH9.3e-3851.97COBRA-like protein 9 OS=Arabidopsis thaliana GN=COBL9 PE=2 SV=1[more]
BLAST of Cla005285 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L312_CUCSA2.8e-9788.67Uncharacterized protein OS=Cucumis sativus GN=Csa_3G078790 PE=4 SV=1[more]
A0A0A0L8A2_CUCSA7.1e-6964.40Uncharacterized protein OS=Cucumis sativus GN=Csa_3G423810 PE=4 SV=1[more]
A0A059BVY2_EUCGR2.0e-6368.18Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03435 PE=4 SV=1[more]
W9RRX7_9ROSA8.4e-6264.06Uncharacterized protein OS=Morus notabilis GN=L484_011885 PE=4 SV=1[more]
E0CVL9_VITVI1.0e-5960.21Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g00620 PE=4 SV=... [more]
BLAST of Cla005285 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449470463|ref|XP_004152936.1|4.0e-9788.67PREDICTED: COBRA-like protein 10 [Cucumis sativus][more]
gi|659126984|ref|XP_008463461.1|1.6e-9087.82PREDICTED: COBRA-like protein 10 [Cucumis melo][more]
gi|659109375|ref|XP_008454682.1|1.4e-7065.46PREDICTED: COBRA-like protein 10 [Cucumis melo][more]
gi|778688637|ref|XP_011652799.1|1.0e-6864.40PREDICTED: COBRA-like protein 10 [Cucumis sativus][more]
gi|720038113|ref|XP_010267880.1|5.0e-6865.83PREDICTED: COBRA-like protein 10 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0016049 cell growth
biological_process GO:0010215 cellulose microfibril organization
cellular_component GO:0031225 anchored component of membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0030247 polysaccharide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005285Cla005285.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31052FAMILY NOT NAMEDcoord: 5..200
score: 1.4E
NoneNo IPR availablePANTHERPTHR31052:SF2COBRA-LIKE PROTEIN 10-RELATEDcoord: 5..200
score: 1.4E