Cla005281 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla005281
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Polyubiquitin (AHRD V1 ***- D7MHY1_ARALL); contains Interpro domain(s) IPR000626 Ubiquitin
Location	Chr10 : 6280164 .. 6280616 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTGAGGATGGTCCTTCATTGAACAATGATACCTCAAACTTCATCTCAATTGGAGCTGCAATTCAAGCTGTGCAGGCAATGCACAACATTGATGAAGACCTTCTTTTTGAAGCCTTTGATTTTCTAGAGGAGGGAAAGAATGCCGCAATATTTATAACAATGAATGCAAGTTTCCGTAGCAAGTGGTTGAGGAAGAAGCTTCTTCCTCCGCAGCCAATCGAGATCTTAGTTAAAAAACTAGATGGCAAGACATTTACTGTAACTGCTTGCATGTCAGCCACAATCGATGAATCGAAACTTAAAATTCAAGCAATTGAAGGATATCTTCCAAGCAAAATCCGCCTGATTCATGCTGGAAAGCAGCTTGAAGATGGAAGAAGTATAGCAGACTGTGGCTTAAAAGATGGGTCTCTTGTGCAGTTGGTGTTTAGATTGTGTGGCTGTTAG

mRNA sequence

ATGGCAACTGAGGATGGTCCTTCATTGAACAATGATACCTCAAACTTCATCTCAATTGGAGCTGCAATTCAAGCTGTGCAGGCAATGCACAACATTGATGAAGACCTTCTTTTTGAAGCCTTTGATTTTCTAGAGGAGGGAAAGAATGCCGCAATATTTATAACAATGAATGCAAGTTTCCGTAGCAAGTGGTTGAGGAAGAAGCTTCTTCCTCCGCAGCCAATCGAGATCTTAGTTAAAAAACTAGATGGCAAGACATTTACTGTAACTGCTTGCATGTCAGCCACAATCGATGAATCGAAACTTAAAATTCAAGCAATTGAAGGATATCTTCCAAGCAAAATCCGCCTGATTCATGCTGGAAAGCAGCTTGAAGATGGAAGAAGTATAGCAGACTGTGGCTTAAAAGATGGGTCTCTTGTGCAGTTGGTGTTTAGATTGTGTGGCTGTTAG

Coding sequence (CDS)

ATGGCAACTGAGGATGGTCCTTCATTGAACAATGATACCTCAAACTTCATCTCAATTGGAGCTGCAATTCAAGCTGTGCAGGCAATGCACAACATTGATGAAGACCTTCTTTTTGAAGCCTTTGATTTTCTAGAGGAGGGAAAGAATGCCGCAATATTTATAACAATGAATGCAAGTTTCCGTAGCAAGTGGTTGAGGAAGAAGCTTCTTCCTCCGCAGCCAATCGAGATCTTAGTTAAAAAACTAGATGGCAAGACATTTACTGTAACTGCTTGCATGTCAGCCACAATCGATGAATCGAAACTTAAAATTCAAGCAATTGAAGGATATCTTCCAAGCAAAATCCGCCTGATTCATGCTGGAAAGCAGCTTGAAGATGGAAGAAGTATAGCAGACTGTGGCTTAAAAGATGGGTCTCTTGTGCAGTTGGTGTTTAGATTGTGTGGCTGTTAG

Protein sequence

MATEDGPSLNNDTSNFISIGAAIQAVQAMHNIDEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCGC

Homology

[Close]

BLAST of Cla005281 vs. Swiss-Prot
Match: UBIQP_EUPEU (Polyubiquitin OS=Euplotes eurystomus PE=3 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 39  DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLDVE 98

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 99  QSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 151

HSP 2 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 115 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLDVE 174

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 175 QSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 227

HSP 3 Score: 69.3 bits (168), Expect = 4.0e-11
Identity = 39/75 (52.00%), Postives = 46/75 (61.33%), Query Frame = 1


Query: 75  IEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCG 134
           ++I VK L GKT T+    S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  
Sbjct: 1   MQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 135 LKDGSLVQLVFRLCG 150
           ++  S + LV RL G
Sbjct: 61  IQKESTLHLVLRLRG 75

[Close]

BLAST of Cla005281 vs. Swiss-Prot
Match: UBIQP_AVEFA (Polyubiquitin OS=Avena fatua PE=2 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 39  DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 98

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 99  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 151

HSP 2 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 115 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 174

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 175 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 227

HSP 3 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 250

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 251 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 303

HSP 4 Score: 68.9 bits (167), Expect = 5.2e-11
Identity = 39/75 (52.00%), Postives = 46/75 (61.33%), Query Frame = 1


Query: 75  IEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCG 134
           ++I VK L GKT T+    S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 135 LKDGSLVQLVFRLCG 150
           ++  S + LV RL G
Sbjct: 61  IQKESTLHLVLRLRG 75

[Close]

BLAST of Cla005281 vs. Swiss-Prot
Match: UBQ3_ORYSJ (Polyubiquitin 3 OS=Oryza sativa subsp. japonica GN=UBQ3 PE=2 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 39  DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 98

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 99  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 151

HSP 2 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 115 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 174

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 175 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 227

HSP 3 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 250

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 251 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 303

HSP 4 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 326

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 327 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 379

HSP 5 Score: 69.3 bits (168), Expect = 4.0e-11
Identity = 39/75 (52.00%), Postives = 46/75 (61.33%), Query Frame = 1


Query: 75  IEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCG 134
           ++I VK L GKT T+    S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  
Sbjct: 1   MQIFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 135 LKDGSLVQLVFRLCG 150
           ++  S + LV RL G
Sbjct: 61  IQKESTLHLVLRLRG 75

[Close]

BLAST of Cla005281 vs. Swiss-Prot
Match: UBQ4_ARATH (Polyubiquitin 4 OS=Arabidopsis thaliana GN=UBQ4 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 39  DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 98

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 99  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 151

HSP 2 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 115 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 174

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 175 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 227

HSP 3 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 250

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 251 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 303

HSP 4 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 326

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 327 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 379

HSP 5 Score: 68.9 bits (167), Expect = 5.2e-11
Identity = 39/75 (52.00%), Postives = 46/75 (61.33%), Query Frame = 1


Query: 75  IEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCG 134
           ++I VK L GKT T+    S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 135 LKDGSLVQLVFRLCG 150
           ++  S + LV RL G
Sbjct: 61  IQKESTLHLVLRLRG 75

[Close]

BLAST of Cla005281 vs. Swiss-Prot
Match: UBIQP_PEA (Polyubiquitin OS=Pisum sativum GN=PU1 PE=2 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 39  DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 98

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 99  SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 151

HSP 2 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 115 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 174

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 175 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 227

HSP 3 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 191 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 250

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 251 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 303

HSP 4 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 49/117 (41.88%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 267 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 326

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 327 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 379

HSP 5 Score: 68.9 bits (167), Expect = 5.2e-11
Identity = 39/75 (52.00%), Postives = 46/75 (61.33%), Query Frame = 1


Query: 75  IEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCG 134
           ++I VK L GKT T+    S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 135 LKDGSLVQLVFRLCG 150
           ++  S + LV RL G
Sbjct: 61  IQKESTLHLVLRLRG 75

[Close]

BLAST of Cla005281 vs. TrEMBL
Match: D7MHY1_ARALL (Polyubiquitin OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915730 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.8e-11
Identity = 58/148 (39.19%), Postives = 81/148 (54.73%), Query Frame = 1


Query: 3   TEDGPSLNNDTSNFIS-IGAAIQAVQAMHNIDEDLLFEAFDFLEEGKNAAIFITMNASFR 62
           TE   +L+ ++S  I+ + A IQ  + +  +D+  L  A   LE+G+  A +     S  
Sbjct: 12  TEKTITLDAESSYTINNVKAQIQDKEGIP-LDQQRLIFAGKQLEDGRTLADYNIQKESIL 71

Query: 63  SKWLRKKLLPPQPIEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAG 122
              LR +      ++I VK L GKT T+    S TID  K KIQ  EG LP + RLI AG
Sbjct: 72  HLALRLR----GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAG 131

Query: 123 KQLEDGRSIADCGLKDGSLVQLVFRLCG 150
           KQLEDGR++AD  ++  S + LV RL G
Sbjct: 132 KQLEDGRTLADYNIQKESTLHLVLRLRG 154

[Close]

BLAST of Cla005281 vs. TrEMBL
Match: D7MHY1_ARALL (Polyubiquitin OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915730 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.3e-10
Identity = 49/117 (41.88%), Postives = 64/117 (54.70%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 422 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 481

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG +P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 482 SSDTIDNVKAKIQDKEGIVPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 534

HSP 2 Score: 70.9 bits (172), Expect = 1.5e-09
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 194 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 253

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 254 SSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 306

HSP 3 Score: 68.9 bits (167), Expect = 5.8e-09
Identity = 39/75 (52.00%), Postives = 48/75 (64.00%), Query Frame = 1


Query: 75  IEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCG 134
           ++I VK L GKT T+    S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  
Sbjct: 384 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 443

Query: 135 LKDGSLVQLVFRLCG 150
           ++  S + LV RL G
Sbjct: 444 IQKESTLHLVLRLRG 458

HSP 4 Score: 68.2 bits (165), Expect = 9.9e-09
Identity = 47/117 (40.17%), Postives = 62/117 (52.99%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L G+T T+   
Sbjct: 270 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGRTITLEVE 329

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  E     + RLI AGKQLEDGR++AD  ++  S + LV RLCG
Sbjct: 330 SSDTIDNVKAKIQDKEEIPADQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCG 382

HSP 5 Score: 66.6 bits (161), Expect = 2.9e-08
Identity = 47/117 (40.17%), Postives = 62/117 (52.99%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 118 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 177

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KI+  EG    + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 178 SSDTIDNVKAKIEDKEGIPTDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 230

HSP 6 Score: 57.0 bits (136), Expect = 2.3e-05
Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 1


Query: 75  IEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCG 134
           ++I  + L  KT T+ A  S TI+  K +IQ  EG    + RLI AGKQLEDGR++AD  
Sbjct: 4   MQIFARTLTEKTITLDAESSYTINNVKAQIQDKEGIPLDQQRLIFAGKQLEDGRTLADYN 63

Query: 135 LKDGSLVQLVFRLCG 150
           ++  S++ L  RL G
Sbjct: 64  IQKESILHLALRLRG 78

HSP 7 Score: 74.7 bits (182), Expect = 1.1e-10
Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = 1


Query: 3   TEDGPSLNNDTSNFIS-IGAAIQAVQAMHNIDEDLLFEAFDFLEEGKNAAIFITMNASFR 62
           TE   +L+ ++S+ I+ + A IQ ++ +  +D+  L  +   L++G+  A +     S  
Sbjct: 11  TEKTITLDVESSDTINNVKAKIQDIEGIP-LDQQRLIFSGKLLDDGRTLADYSIQKESIL 70

Query: 63  SKWLRKKLLPPQPIEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAG 122
              LR +      ++I +K L GKT T+    S TID  K KIQ  EG  P + RLI AG
Sbjct: 71  HLALRLR----GGMQIFIKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 130

Query: 123 KQLEDGRSIADCGLKDGSLVQLVFRLCG 150
           KQLEDGR++AD  ++  S + LV RL G
Sbjct: 131 KQLEDGRTLADYNIQKESTLHLVLRLRG 153

[Close]

BLAST of Cla005281 vs. TrEMBL
Match: D7KM49_ARALL (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_682557 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-09
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 117 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 176

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 177 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 229

HSP 2 Score: 70.9 bits (172), Expect = 1.5e-09
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 193 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 252

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 253 SSDTIDNLKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 305

HSP 3 Score: 70.9 bits (172), Expect = 1.5e-09
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 269 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 328

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 329 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 381

HSP 4 Score: 55.5 bits (132), Expect = 6.7e-05
Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 1


Query: 75  IEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCG 134
           ++I  K L  KT T+    S TI+  K KIQ IEG    + RLI +GK L+DGR++AD  
Sbjct: 3   MQIYAKTLTEKTITLDVESSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62

Query: 135 LKDGSLVQLVFRLCG 150
           ++  S++ L  RL G
Sbjct: 63  IQKESILHLALRLRG 77

HSP 5 Score: 73.6 bits (179), Expect = 2.4e-10
Identity = 50/117 (42.74%), Postives = 64/117 (54.70%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 423 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 482

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG LP + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 483 SSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 535

[Close]

BLAST of Cla005281 vs. TrEMBL
Match: R0H252_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10007326mg PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.0e-10
Identity = 49/118 (41.53%), Postives = 64/118 (54.24%), Query Frame = 1


Query: 32  IDEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTA 91
           +D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+  
Sbjct: 270 LDQQRLIYAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEV 329

Query: 92  CMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
             S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 330 ESSDTIDNVKAKIQDKEGITPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 383

HSP 2 Score: 72.0 bits (175), Expect = 6.9e-10
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT  +   
Sbjct: 119 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTIILEVE 178

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ   G LP + RLIHAGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 179 SSDTIDNVKAKIQDKVGILPDQQRLIHAGKQLEDGRTLADYNIQKESTLHLVLRLRG 231

HSP 3 Score: 71.6 bits (174), Expect = 9.0e-10
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 499 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 558

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 559 SSDTIDNVKAKIQDKEGITPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 611

HSP 4 Score: 70.9 bits (172), Expect = 1.5e-09
Identity = 53/140 (37.86%), Postives = 74/140 (52.86%), Query Frame = 1


Query: 10  NNDTSNFISIGAAIQAVQAMHNIDEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKL 69
           ++DT N +   A IQ  + +  +D+  L  +   L++G   A +     S     LR + 
Sbjct: 23  SSDTINHVK--AQIQDREGIP-LDQQRLIFSGKLLDDGLTLADYNIQKESVLHLALRLR- 82

Query: 70  LPPQPIEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRS 129
                ++I VK L GKT T+    S TID  K KIQ  EG  P + RLI AGKQLEDGR+
Sbjct: 83  ---GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGITPDQQRLIFAGKQLEDGRT 142

Query: 130 IADCGLKDGSLVQLVFRLCG 150
           +AD  ++  S + LV RL G
Sbjct: 143 LADYNIQKESTLHLVLRLRG 155

HSP 5 Score: 70.9 bits (172), Expect = 1.5e-09
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 347 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 406

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 407 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 459

HSP 6 Score: 69.7 bits (169), Expect = 3.4e-09
Identity = 48/117 (41.03%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT  +   
Sbjct: 195 DQQRLIHAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTIILEVE 254

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG L  + RLI+AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 255 SSDTIDNVKAKIQDKEGILLDQQRLIYAGKQLEDGRTLADYNIQKESTLHLVLRLRG 307

HSP 7 Score: 47.8 bits (112), Expect = 1.4e-02
Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 1


Query: 75  IEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCG 134
           ++I  K L  KT T+    S TI+  K +IQ  EG    + RLI +GK L+DG ++AD  
Sbjct: 5   MQIHAKTLTEKTITLDVKSSDTINHVKAQIQDREGIPLDQQRLIFSGKLLDDGLTLADYN 64

Query: 135 LKDGSLVQLVFRLCG 150
           ++  S++ L  RL G
Sbjct: 65  IQKESVLHLALRLRG 79

HSP 8 Score: 73.2 bits (178), Expect = 3.1e-10
Identity = 56/149 (37.58%), Postives = 75/149 (50.34%), Query Frame = 1


Query: 3   TEDGPSLNNDTSNFISIGAAIQAVQAMHNI--DEDLLFEAFDFLEEGKNAAIFITMNASF 62
           T  G ++  D  +  +I    Q +Q    I  D+  L  A   LE+G+  A +     S 
Sbjct: 9   TLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 68

Query: 63  RSKWLRKKLLPPQPIEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHA 122
               LR   L    ++I VK L GKT T+    S TI+  K KIQ  EG  P + RLI A
Sbjct: 69  LHLVLR---LRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFA 128

Query: 123 GKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
           GKQLEDGR++AD  ++  S + LV RL G
Sbjct: 129 GKQLEDGRTLADYNIQKESTLHLVLRLRG 154

[Close]

BLAST of Cla005281 vs. TrEMBL
Match: Q84JH0_BIGNA (Polyubiquitin OS=Bigelowiella natans PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-10
Identity = 56/149 (37.58%), Postives = 75/149 (50.34%), Query Frame = 1


Query: 3   TEDGPSLNNDTSNFISIGAAIQAVQAMHNI--DEDLLFEAFDFLEEGKNAAIFITMNASF 62
           T  G ++  D  +  +I    Q +Q    I  D+  L  A   LE+G+  A +     S 
Sbjct: 86  TLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 145

Query: 63  RSKWLRKKLLPPQPIEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHA 122
               LR   L    ++I VK L GKT T+    S TI+  K KIQ  EG  P + RLI A
Sbjct: 146 LHLVLR---LRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFA 205

Query: 123 GKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
           GKQLEDGR++AD  ++  S + LV RL G
Sbjct: 206 GKQLEDGRTLADYNIQKESTLHLVLRLRG 231

HSP 2 Score: 72.0 bits (175), Expect = 6.9e-10
Identity = 55/147 (37.41%), Postives = 74/147 (50.34%), Query Frame = 1


Query: 3   TEDGPSLNNDTSNFISIGAAIQAVQAMHNI--DEDLLFEAFDFLEEGKNAAIFITMNASF 62
           T  G ++  D  +  +I    Q +Q    I  D+  L  A   LE+G+  A +     S 
Sbjct: 163 TLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 222

Query: 63  RSKWLRKKLLPPQPIEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHA 122
               LR   L    ++I VK L GKT T+    S TI+  K KIQ  EG  P + RLI A
Sbjct: 223 LHLVLR---LRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFA 282

Query: 123 GKQLEDGRSIADCGLKDGSLVQLVFRL 148
           GKQLEDGR++AD  ++  S + LV RL
Sbjct: 283 GKQLEDGRTLADYNIQKESTLHLVLRL 306

HSP 3 Score: 73.2 bits (178), Expect = 3.1e-10
Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 1


Query: 59  SFRSKWLRKKLLPPQ-PIEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRL 118
           SFR +  +KK L  +  ++I VK L GKT T+    S TID  K KIQ  EG  P + RL
Sbjct: 32  SFRCREKKKKTLTHRIKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 91

Query: 119 IHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
           I AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 92  IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 123

[Close]

BLAST of Cla005281 vs. NCBI nr
Match: gi|297805150|ref|XP_002870459.1| (polyubiquitin [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 75.9 bits (185), Expect = 6.8e-11
Identity = 58/148 (39.19%), Postives = 81/148 (54.73%), Query Frame = 1


Query: 3   TEDGPSLNNDTSNFIS-IGAAIQAVQAMHNIDEDLLFEAFDFLEEGKNAAIFITMNASFR 62
           TE   +L+ ++S  I+ + A IQ  + +  +D+  L  A   LE+G+  A +     S  
Sbjct: 12  TEKTITLDAESSYTINNVKAQIQDKEGIP-LDQQRLIFAGKQLEDGRTLADYNIQKESIL 71

Query: 63  SKWLRKKLLPPQPIEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAG 122
              LR +      ++I VK L GKT T+    S TID  K KIQ  EG LP + RLI AG
Sbjct: 72  HLALRLR----GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAG 131

Query: 123 KQLEDGRSIADCGLKDGSLVQLVFRLCG 150
           KQLEDGR++AD  ++  S + LV RL G
Sbjct: 132 KQLEDGRTLADYNIQKESTLHLVLRLRG 154

[Close]

BLAST of Cla005281 vs. NCBI nr
Match: gi|297805150|ref|XP_002870459.1| (polyubiquitin [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 72.4 bits (176), Expect = 7.6e-10
Identity = 49/117 (41.88%), Postives = 64/117 (54.70%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 422 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 481

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG +P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 482 SSDTIDNVKAKIQDKEGIVPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 534

HSP 2 Score: 70.9 bits (172), Expect = 2.2e-09
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 194 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 253

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 254 SSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 306

HSP 3 Score: 68.9 bits (167), Expect = 8.4e-09
Identity = 39/75 (52.00%), Postives = 48/75 (64.00%), Query Frame = 1


Query: 75  IEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCG 134
           ++I VK L GKT T+    S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  
Sbjct: 384 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 443

Query: 135 LKDGSLVQLVFRLCG 150
           ++  S + LV RL G
Sbjct: 444 IQKESTLHLVLRLRG 458

HSP 4 Score: 68.2 bits (165), Expect = 1.4e-08
Identity = 47/117 (40.17%), Postives = 62/117 (52.99%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L G+T T+   
Sbjct: 270 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGRTITLEVE 329

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  E     + RLI AGKQLEDGR++AD  ++  S + LV RLCG
Sbjct: 330 SSDTIDNVKAKIQDKEEIPADQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCG 382

HSP 5 Score: 66.6 bits (161), Expect = 4.1e-08
Identity = 47/117 (40.17%), Postives = 62/117 (52.99%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 118 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 177

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KI+  EG    + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 178 SSDTIDNVKAKIEDKEGIPTDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 230

HSP 6 Score: 57.0 bits (136), Expect = 3.3e-05
Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 1


Query: 75  IEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCG 134
           ++I  + L  KT T+ A  S TI+  K +IQ  EG    + RLI AGKQLEDGR++AD  
Sbjct: 4   MQIFARTLTEKTITLDAESSYTINNVKAQIQDKEGIPLDQQRLIFAGKQLEDGRTLADYN 63

Query: 135 LKDGSLVQLVFRLCG 150
           ++  S++ L  RL G
Sbjct: 64  IQKESILHLALRLRG 78

HSP 7 Score: 74.7 bits (182), Expect = 1.5e-10
Identity = 57/148 (38.51%), Postives = 81/148 (54.73%), Query Frame = 1


Query: 3   TEDGPSLNNDTSNFIS-IGAAIQAVQAMHNIDEDLLFEAFDFLEEGKNAAIFITMNASFR 62
           TE   +L+ ++S+ IS + A IQ  + +  +D+  L  +   LE+G+  A +     S  
Sbjct: 11  TEKTIALDVESSDTISNVKAKIQDKEGIP-LDQQRLIFSGKLLEDGRTLADYSIQKHSTL 70

Query: 63  SKWLRKKLLPPQPIEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAG 122
              LR +      ++I VK L GKT T+    S TID  K KIQ  EG  P + RLI AG
Sbjct: 71  HLTLRLR----GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 130

Query: 123 KQLEDGRSIADCGLKDGSLVQLVFRLCG 150
           KQLEDGR++AD  ++  S + LV RL G
Sbjct: 131 KQLEDGRTLADYNIQKESTLHLVLRLRG 153

[Close]

BLAST of Cla005281 vs. NCBI nr
Match: gi|727617672|ref|XP_010480024.1| (PREDICTED: polyubiquitin-like [Camelina sativa])

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-09
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 117 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 176

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 177 SSDTIDSVKAKIQDKEGITPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 229

HSP 2 Score: 58.5 bits (140), Expect = 1.1e-05
Identity = 47/130 (36.15%), Postives = 66/130 (50.77%), Query Frame = 1


Query: 18  SIGAAIQAVQAMHNIDEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEI 77
           S+ A IQ  + +    + L+F A   LE+G+  A +     S     LR +      ++I
Sbjct: 179 SVKAKIQDKEGITPDQQRLIF-AGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQI 238

Query: 78  LVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKD 137
            VK L GKT T+    S TI   K K Q  EG  P   +L+ A KQLEDGR++AD  ++ 
Sbjct: 239 FVKSLAGKTITLEVESSDTIYNVKAKFQDKEGIPPVLQKLLFARKQLEDGRTLADYNIQK 298

Query: 138 GSLVQLVFRL 148
            S + LV RL
Sbjct: 299 ESTLHLVLRL 303

HSP 3 Score: 74.7 bits (182), Expect = 1.5e-10
Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = 1


Query: 3   TEDGPSLNNDTSNFIS-IGAAIQAVQAMHNIDEDLLFEAFDFLEEGKNAAIFITMNASFR 62
           TE   +L+ ++S+ I+ + A IQ ++ +  +D+  L  +   L++G+  A +     S  
Sbjct: 11  TEKTITLDVESSDTINNVKAKIQDIEGIP-LDQQRLIFSGKLLDDGRTLADYSIQKESIL 70

Query: 63  SKWLRKKLLPPQPIEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAG 122
              LR +      ++I +K L GKT T+    S TID  K KIQ  EG  P + RLI AG
Sbjct: 71  HLALRLR----GGMQIFIKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 130

Query: 123 KQLEDGRSIADCGLKDGSLVQLVFRLCG 150
           KQLEDGR++AD  ++  S + LV RL G
Sbjct: 131 KQLEDGRTLADYNIQKESTLHLVLRLRG 153

[Close]

BLAST of Cla005281 vs. NCBI nr
Match: gi|297847850|ref|XP_002891806.1| (predicted protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 70.9 bits (172), Expect = 2.2e-09
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 117 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 176

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 177 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 229

HSP 2 Score: 70.9 bits (172), Expect = 2.2e-09
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 193 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 252

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 253 SSDTIDNLKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 305

HSP 3 Score: 70.9 bits (172), Expect = 2.2e-09
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 269 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 328

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 329 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 381

HSP 4 Score: 55.5 bits (132), Expect = 9.6e-05
Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 1


Query: 75  IEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCG 134
           ++I  K L  KT T+    S TI+  K KIQ IEG    + RLI +GK L+DGR++AD  
Sbjct: 3   MQIYAKTLTEKTITLDVESSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62

Query: 135 LKDGSLVQLVFRLCG 150
           ++  S++ L  RL G
Sbjct: 63  IQKESILHLALRLRG 77

HSP 5 Score: 73.6 bits (179), Expect = 3.4e-10
Identity = 50/117 (42.74%), Postives = 64/117 (54.70%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 423 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 482

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG LP + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 483 SSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 535

[Close]

BLAST of Cla005281 vs. NCBI nr
Match: gi|565450815|ref|XP_006285847.1| (hypothetical protein CARUB_v10007326mg, partial [Capsella rubella])

HSP 1 Score: 72.8 bits (177), Expect = 5.8e-10
Identity = 49/118 (41.53%), Postives = 64/118 (54.24%), Query Frame = 1


Query: 32  IDEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTA 91
           +D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+  
Sbjct: 270 LDQQRLIYAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEV 329

Query: 92  CMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
             S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 330 ESSDTIDNVKAKIQDKEGITPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 383

HSP 2 Score: 72.0 bits (175), Expect = 9.9e-10
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT  +   
Sbjct: 119 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTIILEVE 178

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ   G LP + RLIHAGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 179 SSDTIDNVKAKIQDKVGILPDQQRLIHAGKQLEDGRTLADYNIQKESTLHLVLRLRG 231

HSP 3 Score: 71.6 bits (174), Expect = 1.3e-09
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 499 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 558

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 559 SSDTIDNVKAKIQDKEGITPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 611

HSP 4 Score: 70.9 bits (172), Expect = 2.2e-09
Identity = 53/140 (37.86%), Postives = 74/140 (52.86%), Query Frame = 1


Query: 10  NNDTSNFISIGAAIQAVQAMHNIDEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKL 69
           ++DT N +   A IQ  + +  +D+  L  +   L++G   A +     S     LR + 
Sbjct: 23  SSDTINHVK--AQIQDREGIP-LDQQRLIFSGKLLDDGLTLADYNIQKESVLHLALRLR- 82

Query: 70  LPPQPIEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRS 129
                ++I VK L GKT T+    S TID  K KIQ  EG  P + RLI AGKQLEDGR+
Sbjct: 83  ---GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGITPDQQRLIFAGKQLEDGRT 142

Query: 130 IADCGLKDGSLVQLVFRLCG 150
           +AD  ++  S + LV RL G
Sbjct: 143 LADYNIQKESTLHLVLRLRG 155

HSP 5 Score: 70.9 bits (172), Expect = 2.2e-09
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT T+   
Sbjct: 347 DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTITLEVE 406

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG  P + RLI AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 407 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 459

HSP 6 Score: 69.7 bits (169), Expect = 4.9e-09
Identity = 48/117 (41.03%), Postives = 63/117 (53.85%), Query Frame = 1


Query: 33  DEDLLFEAFDFLEEGKNAAIFITMNASFRSKWLRKKLLPPQPIEILVKKLDGKTFTVTAC 92
           D+  L  A   LE+G+  A +     S     LR +      ++I VK L GKT  +   
Sbjct: 195 DQQRLIHAGKQLEDGRTLADYNIQKESTLHLVLRLR----GGMQIFVKTLTGKTIILEVE 254

Query: 93  MSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
            S TID  K KIQ  EG L  + RLI+AGKQLEDGR++AD  ++  S + LV RL G
Sbjct: 255 SSDTIDNVKAKIQDKEGILLDQQRLIYAGKQLEDGRTLADYNIQKESTLHLVLRLRG 307

HSP 7 Score: 47.8 bits (112), Expect = 2.0e-02
Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 1


Query: 75  IEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHAGKQLEDGRSIADCG 134
           ++I  K L  KT T+    S TI+  K +IQ  EG    + RLI +GK L+DG ++AD  
Sbjct: 5   MQIHAKTLTEKTITLDVKSSDTINHVKAQIQDREGIPLDQQRLIFSGKLLDDGLTLADYN 64

Query: 135 LKDGSLVQLVFRLCG 150
           ++  S++ L  RL G
Sbjct: 65  IQKESVLHLALRLRG 79

HSP 8 Score: 73.2 bits (178), Expect = 4.4e-10
Identity = 56/149 (37.58%), Postives = 75/149 (50.34%), Query Frame = 1


Query: 3   TEDGPSLNNDTSNFISIGAAIQAVQAMHNI--DEDLLFEAFDFLEEGKNAAIFITMNASF 62
           T  G ++  D  +  +I    Q +Q    I  D+  L  A   LE+G+  A +     S 
Sbjct: 9   TLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 68

Query: 63  RSKWLRKKLLPPQPIEILVKKLDGKTFTVTACMSATIDESKLKIQAIEGYLPSKIRLIHA 122
               LR   L    ++I VK L GKT T+    S TI+  K KIQ  EG  P + RLI A
Sbjct: 69  LHLVLR---LRGGSMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFA 128

Query: 123 GKQLEDGRSIADCGLKDGSLVQLVFRLCG 150
           GKQLEDGR++AD  ++  S + LV RL G
Sbjct: 129 GKQLEDGRTLADYNIQKESTLHLVLRLRG 154

The following BLAST results are available for this feature:

BLAST of Cla005281 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UBIQP_EUPEU	1.1e-11	41.88	Polyubiquitin OS=Euplotes eurystomus PE=3 SV=2	[more]
UBIQP_AVEFA	1.4e-11	41.88	Polyubiquitin OS=Avena fatua PE=2 SV=2	[more]
UBQ3_ORYSJ	1.4e-11	41.88	Polyubiquitin 3 OS=Oryza sativa subsp. japonica GN=UBQ3 PE=2 SV=2	[more]
UBQ4_ARATH	1.4e-11	41.88	Polyubiquitin 4 OS=Arabidopsis thaliana GN=UBQ4 PE=1 SV=1	[more]
UBIQP_PEA	1.4e-11	41.88	Polyubiquitin OS=Pisum sativum GN=PU1 PE=2 SV=2	[more]

BLAST of Cla005281 vs. TrEMBL


Match Name	E-value	Identity	Description
D7MHY1_ARALL	4.8e-11	39.19	Polyubiquitin OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915730 PE=4 SV=1	[more]
D7MHY1_ARALL	5.3e-10	41.88	Polyubiquitin OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915730 PE=4 SV=1	[more]
D7KM49_ARALL	1.5e-09	41.88	Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_682557 PE=4 ...	[more]
R0H252_9BRAS	4.0e-10	41.53	Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10007326mg PE=4...	[more]
Q84JH0_BIGNA	3.1e-10	37.58	Polyubiquitin OS=Bigelowiella natans PE=2 SV=1	[more]

BLAST of Cla005281 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|297805150\|ref\|XP_002870459.1\|	6.8e-11	39.19	polyubiquitin [Arabidopsis lyrata subsp. lyrata]	[more]
gi\|297805150\|ref\|XP_002870459.1\|	7.6e-10	41.88	polyubiquitin [Arabidopsis lyrata subsp. lyrata]	[more]
gi\|727617672\|ref\|XP_010480024.1\|	1.3e-09	41.88	PREDICTED: polyubiquitin-like [Camelina sativa]	[more]
gi\|297847850\|ref\|XP_002891806.1\|	2.2e-09	41.88	predicted protein [Arabidopsis lyrata subsp. lyrata]	[more]
gi\|565450815\|ref\|XP_006285847.1\|	5.8e-10	41.53	hypothetical protein CARUB_v10007326mg, partial [Capsella rubella]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000626	Ubiquitin_dom
IPR019956	Ubiquitin

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0048011	neurotrophin TRK receptor signaling pathway
biological_process	GO:0032481	positive regulation of type I interferon production
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
biological_process	GO:0051092	positive regulation of NF-kappaB transcription factor activity
biological_process	GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling
biological_process	GO:0002230	positive regulation of defense response to virus by host
biological_process	GO:0090263	positive regulation of canonical Wnt signaling pathway
biological_process	GO:0043065	positive regulation of apoptotic process
biological_process	GO:0070423	nucleotide-binding oligomerization domain containing signaling pathway
biological_process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process	GO:0007219	Notch signaling pathway
biological_process	GO:0007220	Notch receptor processing
biological_process	GO:0038061	NIK/NF-kappaB signaling
biological_process	GO:0051436	negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0032480	negative regulation of type I interferon production
biological_process	GO:0030512	negative regulation of transforming growth factor beta receptor signaling pathway
biological_process	GO:0000122	negative regulation of transcription from RNA polymerase II promoter
biological_process	GO:0042059	negative regulation of epidermal growth factor receptor signaling pathway
biological_process	GO:0090090	negative regulation of canonical Wnt signaling pathway
biological_process	GO:0043066	negative regulation of apoptotic process
biological_process	GO:0070266	necroptotic process
biological_process	GO:0002755	MyD88-dependent toll-like receptor signaling pathway
biological_process	GO:0000084	mitotic S phase
biological_process	GO:0000080	mitotic G1 phase
biological_process	GO:0007254	JNK cascade
biological_process	GO:0034220	ion transmembrane transport
biological_process	GO:0075733	intracellular transport of virus
biological_process	GO:0051437	positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
biological_process	GO:0007265	Ras protein signal transduction
biological_process	GO:0005978	glycogen biosynthetic process
biological_process	GO:0006414	translational elongation
biological_process	GO:0009751	response to salicylic acid
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0019941	modification-dependent protein catabolic process
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0019068	virion assembly
biological_process	GO:0019083	viral transcription
biological_process	GO:0019082	viral protein processing
biological_process	GO:0048010	vascular endothelial growth factor receptor signaling pathway
biological_process	GO:0033209	tumor necrosis factor-mediated signaling pathway
biological_process	GO:0035666	TRIF-dependent toll-like receptor signaling pathway
biological_process	GO:0006415	translational termination
biological_process	GO:0006413	translational initiation
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0010939	regulation of necrotic cell death
biological_process	GO:0038124	toll-like receptor TLR6:TLR2 signaling pathway
biological_process	GO:0038123	toll-like receptor TLR1:TLR2 signaling pathway
biological_process	GO:0034162	toll-like receptor 9 signaling pathway
biological_process	GO:0034146	toll-like receptor 5 signaling pathway
biological_process	GO:0034142	toll-like receptor 4 signaling pathway
biological_process	GO:0034138	toll-like receptor 3 signaling pathway
biological_process	GO:0034134	toll-like receptor 2 signaling pathway
biological_process	GO:0034166	toll-like receptor 10 signaling pathway
biological_process	GO:0050852	T cell receptor signaling pathway
biological_process	GO:0002223	stimulatory C-type lectin receptor signaling pathway
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
biological_process	GO:0044281	small molecule metabolic process
biological_process	GO:0061418	regulation of transcription from RNA polymerase II promoter in response to hypoxia
biological_process	GO:0008286	insulin receptor signaling pathway
biological_process	GO:0000090	mitotic anaphase
biological_process	GO:0006006	glucose metabolic process
biological_process	GO:0031324	negative regulation of cellular metabolic process
biological_process	GO:0051439	regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
biological_process	GO:0032479	regulation of type I interferon production
biological_process	GO:0000086	G2/M transition of mitotic cell cycle
biological_process	GO:1901990	regulation of mitotic cell cycle phase transition
biological_process	GO:0060828	regulation of canonical Wnt signaling pathway
biological_process	GO:0042981	regulation of apoptotic process
biological_process	GO:0097300	programmed necrotic cell death
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0043410	positive regulation of MAPK cascade
biological_process	GO:0035872	nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway
biological_process	GO:0009968	negative regulation of signal transduction
biological_process	GO:0010605	negative regulation of macromolecule metabolic process
biological_process	GO:0002756	MyD88-independent toll-like receptor signaling pathway
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0000087	mitotic M phase
biological_process	GO:0051329	mitotic interphase
biological_process	GO:0046907	intracellular transport
biological_process	GO:0002429	immune response-activating cell surface receptor signaling pathway
biological_process	GO:0007249	I-kappaB kinase/NF-kappaB signaling
biological_process	GO:0000082	G1/S transition of mitotic cell cycle
biological_process	GO:0007173	epidermal growth factor receptor signaling pathway
biological_process	GO:0019221	cytokine-mediated signaling pathway
biological_process	GO:0071456	cellular response to hypoxia
biological_process	GO:0016043	cellular component organization
biological_process	GO:0000075	cell cycle checkpoint
biological_process	GO:0042590	antigen processing and presentation of exogenous peptide antigen via MHC class I
biological_process	GO:0032147	activation of protein kinase activity
biological_process	GO:0044723	single-organism carbohydrate metabolic process
biological_process	GO:0006357	regulation of transcription from RNA polymerase II promoter
biological_process	GO:0051403	stress-activated MAPK cascade
biological_process	GO:0000186	activation of MAPKK activity
biological_process	GO:0008543	fibroblast growth factor receptor signaling pathway
biological_process	GO:0038095	Fc-epsilon receptor signaling pathway
biological_process	GO:0042276	error-prone translesion synthesis
biological_process	GO:0070987	error-free translesion synthesis
biological_process	GO:0016197	endosomal transport
biological_process	GO:0006977	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
biological_process	GO:0042769	DNA damage response, detection of DNA damage
biological_process	GO:0007179	transforming growth factor beta receptor signaling pathway
biological_process	GO:0007411	axon guidance
biological_process	GO:0097190	apoptotic signaling pathway
biological_process	GO:0002479	antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
biological_process	GO:0031145	anaphase-promoting complex-dependent catabolic process
biological_process	GO:0007623	circadian rhythm
biological_process	GO:0000187	activation of MAPK activity
biological_process	GO:0019985	translesion synthesis
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0019058	viral life cycle
cellular_component	GO:0005765	lysosomal membrane
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0010008	endosome membrane
cellular_component	GO:0030666	endocytic vesicle membrane
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0098588	bounding membrane of organelle
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0070062	extracellular exosome
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0044446	intracellular organelle part
cellular_component	GO:0005634	nucleus
cellular_component	GO:0098805	whole membrane
molecular_function	GO:0002020	protease binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0044822	poly(A) RNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0031386	protein tag
molecular_function	GO:0031625	ubiquitin protein ligase binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla005281	Cla005281.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin domain	PFAM	PF00240	ubiquitin	coord: 77..147 score: 9.1
IPR000626	Ubiquitin domain	SMART	SM00213	ubq_7	coord: 75..146 score: 4.8
IPR000626	Ubiquitin domain	PROFILE	PS50053	UBIQUITIN_2	coord: 75..150 score: 19
IPR019956	Ubiquitin	PRINTS	PR00348	UBIQUITIN	coord: 127..148 score: 5.7E-11coord: 106..126 score: 5.7E-11coord: 85..105 score: 5.7
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 73..149 score: 5.8
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 70..149 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla005281	Cla97C05G095940	Watermelon (97103) v2	wmwmbB068
Cla005281	Csa3G080330	Cucumber (Chinese Long) v2	cuwmB194
Cla005281	MELO3C025413	Melon (DHL92) v3.5.1	mewmB448
Cla005281	Cucsa.059730	Cucumber (Gy14) v1	cgywmB048
Cla005281	CmoCh09G009280	Cucurbita moschata (Rifu)	cmowmB006
Cla005281	MELO3C032916.2	Melon (DHL92) v3.6.1	medwmB544
Cla005281	CsaV3_3G005390	Cucumber (Chinese Long) v3	cucwmB204
Cla005281	Bhi11G000517	Wax gourd	wgowmB009

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla005281	Wax gourd	wgowmB593
Cla005281	Cucurbita maxima (Rimu)	cmawmB298
Cla005281	Cucurbita maxima (Rimu)	cmawmB659
Cla005281	Cucurbita moschata (Rifu)	cmowmB289
Cla005281	Cucurbita moschata (Rifu)	cmowmB653
Cla005281	Wild cucumber (PI 183967)	cpiwmB193
Cla005281	Watermelon (Charleston Gray)	wcgwmB052
Cla005281	Cucurbita pepo (Zucchini)	cpewmB002
Cla005281	Cucurbita pepo (Zucchini)	cpewmB386
Cla005281	Bottle gourd (USVL1VR-Ls)	lsiwmB348
Cla005281	Cucumber (Gy14) v2	cgybwmB183
Cla005281	Melon (DHL92) v3.6.1	medwmB434
Cla005281	Silver-seed gourd	carwmB0659
Cla005281	Silver-seed gourd	carwmB0791
Cla005281	Watermelon (97103) v2	wmwmbB052