Cla005247 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla005247
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Signal peptidase complex subunit 3A (AHRD V1 ***- F4J781_ARATH); contains Interpro domain(s) IPR007653 Signal peptidase 22 kDa subunit
Location	Chr3 : 27795430 .. 27797868 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTCTTTTGGTTATCGAGCCAATGCTTTGGTCACTTTCGCCGTCACCATTCTCGTAATTATGTGCGCCATGGCCTCCTTCTCCGATAACTTCAACTCTCCCTCTCCCACTGCCAGTGTTCAGGTCCACCATTCTTTTTCTCCTTGCTCTCTTTTTATTCTTTTCGGTTCTTTTTTTCTTTTTTTCCTTATGTTAGATCTATGGCTTGGACGTTTAGGGTTTTGCTCTGATTTCTGGGAGAGCCTGAATTTTGTCTGCATTTTGTTTGTTCTGATTGTTTTCTGTGGGTTTTAGGTGTTGAATATCAATTGGTTTCAGAAGCAGCTTCATGGAAATGACGAGGTATATTGTTGGAGATTCGTGTTTTGCTCGATTGTTTAATAGAATGCTGCAGATTATTTCTTTTATCTGATTGTATTTTGATTTTGTTTGGTCGAAGTCTATTTTGGGGTCTGATTCTGATGAATCTAGGGAATCTAGTGGAGAATGACATCTGAGTTTGTTTTCTTGCTAGTTACATTTTGATACGAGTATATTGATTGAAAGAATGGAAGTAGAGAAATGATGAATGCCCGTCCACTAATAGTTTCCTAAAATCCTTAGTCATGCGATCTTCATGTCAAATACCACCTCCAGTTCAACATTGGAGAAATGATAGAAATGTCCCTTTTTTTTTTTGTTTAGATGATATAATATTAAATATATCTTCACCAATCAACATAAGCTTTTAGGTCAATTGGTGATTTAACATGGAGTATTTGGTTTGAGGTGAATAAGAGAATTTTTAGATGGAGTGAGATTAGTTATCTCCATGGTGGAGATTAGTTAGCTTCAGTGCTTCTTTGTGGCTGTCCTCTGTCCTCTTTCAAGGATTTTTCTACGTATCATAGGCCTTCTTCTGGAGCCCTTTTTCTAATCTAGGGGGTATGGTGTAGGTTTGTCATTTTGACCCTTCTTTGGTTGGCTTTTCCTTCTGTAGGTGTTCTTATATTGTAAGTACAGTCTTGTTCTGAAAAGATAGAAAGAGAGAGAGAGAGAAAAAGGATATTTGTATAGGCTCTATTTTGCCCCCTCTCCAACAAGATCATGAAATATTTATGGAGGTTTCTATTAACCATCTTCAAATTTGCTTGAAATTTGGAAAAGTTTCAAATTGTTCTTTTCCTCATGCTCTGTAATCAGCTTTGTTCGTCAAAATTGTGAAAAGAGAGCAATACTCTTGAATGGGAGCACTCATTTAAAACTTAGCTCAGAAAACACTGTAGAGGACACATTGAAAGAGGCCACTAGGCAACTCATATTACTGAAAGGATGCTATCATGATCATGGTGGTAGTGCAATGTGATTCTTTGGATTGCTAGACATGCATCACTTAATTCTCTAGCCTGAGTTTACAATAGTTGAGCTAGGAAAGGGATTTCAAGTTGGTATCAAGTATCAAATAGTTGTTGTTCAGTTATTTCCAAACTCATGCAATATCGATAATTTCTTGGTTGATTTTTGGATGTTAATTGCATTACTAACGAGGATAGTCATTCATCCAACGGTGTTGATATTTATTATAGCCTTATACTATACAGTCTGTACTGAAAACCATTAACTGTGCAGGTCAGCATGACCTTAAATATCTCGGTGGACTTGCAGTCACTATTTACATGGAACACAAAGCAGGTATGGCAATAACCTATTTTATAATTTCCCTTTTCCCTTTGTGATTTTTGTGGCATTTCAGTGCCTTTTGAGATATTGAATACTGGAGCTCGAGTTATTGTGTTGAGGATCCAACTTGAAATCAATGACTTTTGCTATTTTTCATTGATTTGGAATATGGACACAAACACCAGTCAGCTGTACTTGTGTTTGGTTTAATATACTATACTACTTATTTCAACTGCAGTTTTCTCATCTTGTTTCTGGTTTCGGCTGTTTGTTTTCATATTATGACTAGCTGACTGAAATGAATGGCTTATTAGACTTTAACACAAGTTTACAGGTTTTTGTTTTTGTAGCTGCTGAGTATGAGACTCCTAAGAATTCCTTGAACCAGGTAAGCTCCATCAATACATGTTCTGGATTTCTAATCCTGCTGCTTATCTTATTCAGTTGTTATGACGTTGTCTTTCAGATCTCACTGTGGGATGGTATAATACCTTCCAAAGAAAACGCCAAATTTTCGATTCACACTTCAAACAAGTATCGTTTCATTGATCAGGTGACCTAGCTACATTCCATGATTAACAATTTAAAGATGAATTTACGTTTTTCATTTACACGAACCTTATCTTGTTATATCCCTTTTTTGTTTTGTAGGGAAGTAATCTCAAAGGTAAAGAATTCAACTTGACACTGCATTGGCATGTAATGCCGAAGACCGGTAAAATGTTCGCCGATAAGATAGTGATGACTGGGTATCGCTTACCGGAGGACTATCGATGA

mRNA sequence

ATGCATTCTTTTGGTTATCGAGCCAATGCTTTGGTCACTTTCGCCGTCACCATTCTCGTAATTATGTGCGCCATGGCCTCCTTCTCCGATAACTTCAACTCTCCCTCTCCCACTGCCAGTGTTCAGGTGTTGAATATCAATTGGTTTCAGAAGCAGCTTCATGGAAATGACGAGCTGACTGAAATGAATGGCTTATTAGACTTTAACACAAGTTTACAGGTTTTTGTTTTTGTAGCTGCTGAGTATGAGACTCCTAAGAATTCCTTGAACCAGATCTCACTGTGGGATGGTATAATACCTTCCAAAGAAAACGCCAAATTTTCGATTCACACTTCAAACAAGTATCGTTTCATTGATCAGGGAAGTAATCTCAAAGGTAAAGAATTCAACTTGACACTGCATTGGCATGTAATGCCGAAGACCGGTAAAATGTTCGCCGATAAGATAGTGATGACTGGGTATCGCTTACCGGAGGACTATCGATGA

Coding sequence (CDS)

ATGCATTCTTTTGGTTATCGAGCCAATGCTTTGGTCACTTTCGCCGTCACCATTCTCGTAATTATGTGCGCCATGGCCTCCTTCTCCGATAACTTCAACTCTCCCTCTCCCACTGCCAGTGTTCAGGTGTTGAATATCAATTGGTTTCAGAAGCAGCTTCATGGAAATGACGAGCTGACTGAAATGAATGGCTTATTAGACTTTAACACAAGTTTACAGGTTTTTGTTTTTGTAGCTGCTGAGTATGAGACTCCTAAGAATTCCTTGAACCAGATCTCACTGTGGGATGGTATAATACCTTCCAAAGAAAACGCCAAATTTTCGATTCACACTTCAAACAAGTATCGTTTCATTGATCAGGGAAGTAATCTCAAAGGTAAAGAATTCAACTTGACACTGCATTGGCATGTAATGCCGAAGACCGGTAAAATGTTCGCCGATAAGATAGTGATGACTGGGTATCGCTTACCGGAGGACTATCGATGA

Protein sequence

MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGNDELTEMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSNKYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDYR

Homology

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BLAST of Cla005247 vs. Swiss-Prot
Match: SPC3B_ARATH (Signal peptidase complex subunit 3B OS=Arabidopsis thaliana GN=At5g27430 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.0e-65
Identity = 120/168 (71.43%), Postives = 138/168 (82.14%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGNDELT 60
           MHSFGYRANAL+TFAVTIL  +CA+ASFSDNF++ +P+A +Q+LNINWFQKQ HGNDE++
Sbjct: 1   MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60

Query: 61  -------EMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSN 120
                  ++  L  +NT  QVF FVAAEYET KN+LNQ+SLWD IIP KE+AKF I  SN
Sbjct: 61  LTLNITADLQSLFTWNTK-QVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISN 120

Query: 121 KYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDYR 162
           KYRFIDQG NL+GK+FNLTLHWHVMPKTGKMFADKIVM+GYRLP  YR
Sbjct: 121 KYRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKIVMSGYRLPNAYR 167

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BLAST of Cla005247 vs. Swiss-Prot
Match: SPC3A_ARATH (Signal peptidase complex subunit 3A OS=Arabidopsis thaliana GN=At3g05230 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 6.3e-63
Identity = 116/168 (69.05%), Postives = 137/168 (81.55%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGNDELT 60
           MH+FGYRANAL+TFAVT L  +CA+ASFSD F++ +P+A +Q+LNIN F+KQ HGNDE++
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  -------EMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSN 120
                  ++  L  +NT  QVFVFVAAEYETPKNSLNQ+SLWD IIP+KE+AKF I  SN
Sbjct: 61  LTLDISADLQSLFTWNTK-QVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSN 120

Query: 121 KYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDYR 162
           KYRFIDQG NL+GK+FNLTLHWHVMPKTGKMFADKIV+ GY LP+ YR
Sbjct: 121 KYRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFADKIVLPGYSLPDAYR 167

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BLAST of Cla005247 vs. Swiss-Prot
Match: SPCS3_ORYSJ (Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica GN=Os01g0131800 PE=3 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 3.1e-33
Identity = 73/160 (45.62%), Postives = 91/160 (56.88%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGNDELT 60
           MHS+  R     T A  +L+  C  AS  D F+ PS  A   V  IN F KQL+GND   
Sbjct: 1   MHSWVQRLLTTATTAALLLLAACCAASALDAFHVPSVQAQAHVTKINRFHKQLNGND--- 60

Query: 61  EMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSNKYRFIDQ 120
                       +VFVF+ AEYE  KNSLNQ+SLWD IIP K+ A   +   +KY  IDQ
Sbjct: 61  ------------KVFVFLTAEYENSKNSLNQVSLWDHIIPDKDKANLQVEVKSKYPLIDQ 120

Query: 121 GSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDY 161
           GS+L+GK+  L LHWHVMPK G M  D++ ++ + LP+ Y
Sbjct: 121 GSSLRGKKVQLVLHWHVMPKAGVMIRDRMALSEFNLPDSY 145

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BLAST of Cla005247 vs. Swiss-Prot
Match: SPCS3_DICDI (Signal peptidase complex subunit 3 OS=Dictyostelium discoideum GN=spcs3 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-13
Identity = 48/166 (28.92%), Postives = 80/166 (48.19%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGN---- 60
           MHS   RAN +V F   +LV +  +   S  F S      +++  I+ F  Q +      
Sbjct: 1   MHSLSQRANTIVCFGGIVLVGVLLLNVLSRAFFSDHVDVDIKLNEIHRFNTQRNFEYSFI 60

Query: 61  --DELTEMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSNK 120
             D    +  L ++NT + +F++V AEY T +N L+Q+ +WD I+  K  A       +K
Sbjct: 61  SIDLDANLEPLFNWNTKM-LFLYVTAEYRTKQNVLSQVVVWDHILTEKSKANIHEKRLSK 120

Query: 121 YRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDY 161
           Y  I+QG  LK     LT +++V+P +G +   ++  + ++ P  Y
Sbjct: 121 YPIINQGLGLKNNTIKLTFNYNVVPISGILTRHQVGTSEFKFPTTY 165

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BLAST of Cla005247 vs. Swiss-Prot
Match: SPCS3_DROME (Signal peptidase complex subunit 3 OS=Drosophila melanogaster GN=Spase22-23 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-12
Identity = 53/177 (29.94%), Postives = 89/177 (50.28%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAVTILVIM---CAMASFSDNFNSPSPTASVQVLNIN----WFQKQL 60
           MH+   R NA V + +++L  +   C +++   ++ + +   +V+VL  N       ++ 
Sbjct: 1   MHTVLTRGNATVAYTLSVLACLTFSCFLSTVFLDYRTDANINTVRVLVKNVPDYGASREK 60

Query: 61  HGN-----DELTEMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFS 120
           H       D  T + G+ ++N   Q+F+++ AEY+TP N LNQ+ LWD II   +NA   
Sbjct: 61  HDLGFVTFDLQTNLTGIFNWNVK-QLFLYLTAEYQTPANQLNQVVLWDKIILRGDNAVLD 120

Query: 121 IHTSN-KYRFIDQGSNLK-GKEFNLTLHWHVMPKTGKMFADKIVMTG---YRLPEDY 161
               N KY F D G+ LK  +  +L L W+++P  G +    +  TG   ++ P DY
Sbjct: 121 FKNMNTKYYFWDDGNGLKDNRNVSLYLSWNIIPNAGLL--PSVQATGKHLFKFPADY 174

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BLAST of Cla005247 vs. TrEMBL
Match: A0A0A0LZ27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570170 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.6e-73
Identity = 139/161 (86.34%), Postives = 143/161 (88.82%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGNDELT 60
           MHSFGYRANAL TFA+TILVIMCAMASFSD FN+PSPTASV+VLNINWFQKQLHGNDE  
Sbjct: 1   MHSFGYRANALATFAITILVIMCAMASFSDTFNTPSPTASVKVLNINWFQKQLHGNDE-- 60

Query: 61  EMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSNKYRFIDQ 120
                        VFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSNKYRFIDQ
Sbjct: 61  -------------VFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSNKYRFIDQ 120

Query: 121 GSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDYR 162
           GSNLKGKEFNLTLHWHVMPKTGKMF +KIVMTGYRLPEDYR
Sbjct: 121 GSNLKGKEFNLTLHWHVMPKTGKMFTNKIVMTGYRLPEDYR 146

[Close]

BLAST of Cla005247 vs. TrEMBL
Match: A0A151TW12_CAJCA (Signal peptidase complex subunit 3B OS=Cajanus cajan GN=KK1_010496 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 4.9e-70
Identity = 132/168 (78.57%), Postives = 149/168 (88.69%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGNDELT 60
           MHSFGYRANAL+TFAVTIL +MCAMAS SDNFNSP+P+A VQVLNINWFQKQ +GNDE++
Sbjct: 1   MHSFGYRANALLTFAVTILALMCAMASLSDNFNSPTPSAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  -------EMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSN 120
                  ++  L  +NT  QVFVF+AAEYETPKNSLNQISLWDGIIPSKE+AKF IHTSN
Sbjct: 61  MTLNISADLQSLFTWNTK-QVFVFLAAEYETPKNSLNQISLWDGIIPSKEHAKFWIHTSN 120

Query: 121 KYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDYR 162
           KYRFIDQGSNL+GKE+NLT+HWHVMPKTGKMFADKIVM GYRLP++YR
Sbjct: 121 KYRFIDQGSNLRGKEYNLTMHWHVMPKTGKMFADKIVMPGYRLPQEYR 167

[Close]

BLAST of Cla005247 vs. TrEMBL
Match: I1NC08_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G236500 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.4e-69
Identity = 131/168 (77.98%), Postives = 149/168 (88.69%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGNDELT 60
           MHSFGYRANAL+TFAVTIL +MCAMAS SDNFN+P+P+A VQVLNINWFQKQ +GNDE++
Sbjct: 1   MHSFGYRANALLTFAVTILALMCAMASVSDNFNTPTPSAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  -------EMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSN 120
                  ++  L  +NT  QVFVF+AAEYETPKNSLNQISLWDGIIPSKE+AKF IHTSN
Sbjct: 61  MTMNISADLQSLFTWNTK-QVFVFLAAEYETPKNSLNQISLWDGIIPSKEHAKFWIHTSN 120

Query: 121 KYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDYR 162
           KYRFIDQGSNL+GKE+NLT+HWHVMPKTGKMFADKIVM GYRLP++YR
Sbjct: 121 KYRFIDQGSNLRGKEYNLTMHWHVMPKTGKMFADKIVMPGYRLPQEYR 167

[Close]

BLAST of Cla005247 vs. TrEMBL
Match: A0A151R4G4_CAJCA (Signal peptidase complex subunit 3B OS=Cajanus cajan GN=KK1_041379 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.4e-69
Identity = 131/168 (77.98%), Postives = 148/168 (88.10%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGNDELT 60
           MHSFGYR NAL+TFAVTIL +MCAMAS SDNFNSP+P+A VQVLNINWFQKQ +GNDE++
Sbjct: 1   MHSFGYRVNALLTFAVTILALMCAMASLSDNFNSPTPSAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  -------EMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSN 120
                  ++  L  +NT  QVFVF+AAEYETPKNSLNQISLWDGIIPSKE+AKF IHTSN
Sbjct: 61  MTLNISADLQSLFTWNTK-QVFVFLAAEYETPKNSLNQISLWDGIIPSKEHAKFWIHTSN 120

Query: 121 KYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDYR 162
           KYRFIDQGSNL+GKE+NLT+HWHVMPKTGKMFADKIVM GYRLP++YR
Sbjct: 121 KYRFIDQGSNLRGKEYNLTMHWHVMPKTGKMFADKIVMPGYRLPQEYR 167

[Close]

BLAST of Cla005247 vs. TrEMBL
Match: I1JRE6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G239600 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.4e-69
Identity = 131/168 (77.98%), Postives = 149/168 (88.69%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGNDELT 60
           MHSFGYRANAL+TFAVTIL +MCAMAS SDNFN+P+P+A VQVLNINWFQKQ +GNDE++
Sbjct: 1   MHSFGYRANALLTFAVTILALMCAMASVSDNFNTPTPSAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  -------EMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSN 120
                  ++  L  +NT  QVFVF+AAEYETPKNSLNQISLWDGIIPSKE+AKF IHTSN
Sbjct: 61  MTLNISADLQSLFTWNTK-QVFVFLAAEYETPKNSLNQISLWDGIIPSKEHAKFWIHTSN 120

Query: 121 KYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDYR 162
           KYRFIDQGSNL+GKE+NLT+HWHVMPK+GKMFADKIVM GYRLPE+YR
Sbjct: 121 KYRFIDQGSNLQGKEYNLTMHWHVMPKSGKMFADKIVMPGYRLPEEYR 167

[Close]

BLAST of Cla005247 vs. NCBI nr
Match: gi|659099567|ref|XP_008450666.1| (PREDICTED: signal peptidase complex subunit 3B-like [Cucumis melo])

HSP 1 Score: 293.1 bits (749), Expect = 2.9e-76
Identity = 145/168 (86.31%), Postives = 152/168 (90.48%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGNDELT 60
           MHSFGYRANAL TFAVTILVIMCAMASFSD FN+PSPTA V+VLNINWFQKQLHGNDE++
Sbjct: 1   MHSFGYRANALATFAVTILVIMCAMASFSDTFNTPSPTARVEVLNINWFQKQLHGNDEVS 60

Query: 61  -------EMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSN 120
                  ++  L  +NT  QVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSN
Sbjct: 61  MTLNISADLQSLFTWNTK-QVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSN 120

Query: 121 KYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDYR 162
           KYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDYR
Sbjct: 121 KYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDYR 167

[Close]

BLAST of Cla005247 vs. NCBI nr
Match: gi|449435691|ref|XP_004135628.1| (PREDICTED: signal peptidase complex subunit 3B-like [Cucumis sativus])

HSP 1 Score: 290.8 bits (743), Expect = 1.5e-75
Identity = 143/168 (85.12%), Postives = 152/168 (90.48%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGNDELT 60
           MHSFGYRANAL TFA+TILVIMCAMASFSD FN+PSPTASV+VLNINWFQKQLHGNDE++
Sbjct: 1   MHSFGYRANALATFAITILVIMCAMASFSDTFNTPSPTASVKVLNINWFQKQLHGNDEVS 60

Query: 61  -------EMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSN 120
                  ++  L  +NT  QVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSN
Sbjct: 61  MTLNISADLQSLFTWNTK-QVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSN 120

Query: 121 KYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDYR 162
           KYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMF +KIVMTGYRLPEDYR
Sbjct: 121 KYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFTNKIVMTGYRLPEDYR 167

[Close]

BLAST of Cla005247 vs. NCBI nr
Match: gi|700210996|gb|KGN66092.1| (hypothetical protein Csa_1G570170 [Cucumis sativus])

HSP 1 Score: 282.3 bits (721), Expect = 5.2e-73
Identity = 139/161 (86.34%), Postives = 143/161 (88.82%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGNDELT 60
           MHSFGYRANAL TFA+TILVIMCAMASFSD FN+PSPTASV+VLNINWFQKQLHGNDE  
Sbjct: 1   MHSFGYRANALATFAITILVIMCAMASFSDTFNTPSPTASVKVLNINWFQKQLHGNDE-- 60

Query: 61  EMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSNKYRFIDQ 120
                        VFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSNKYRFIDQ
Sbjct: 61  -------------VFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSNKYRFIDQ 120

Query: 121 GSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDYR 162
           GSNLKGKEFNLTLHWHVMPKTGKMF +KIVMTGYRLPEDYR
Sbjct: 121 GSNLKGKEFNLTLHWHVMPKTGKMFTNKIVMTGYRLPEDYR 146

[Close]

BLAST of Cla005247 vs. NCBI nr
Match: gi|1012360063|gb|KYP71247.1| (Signal peptidase complex subunit 3B [Cajanus cajan])

HSP 1 Score: 271.9 bits (694), Expect = 7.0e-70
Identity = 132/168 (78.57%), Postives = 149/168 (88.69%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGNDELT 60
           MHSFGYRANAL+TFAVTIL +MCAMAS SDNFNSP+P+A VQVLNINWFQKQ +GNDE++
Sbjct: 1   MHSFGYRANALLTFAVTILALMCAMASLSDNFNSPTPSAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  -------EMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSN 120
                  ++  L  +NT  QVFVF+AAEYETPKNSLNQISLWDGIIPSKE+AKF IHTSN
Sbjct: 61  MTLNISADLQSLFTWNTK-QVFVFLAAEYETPKNSLNQISLWDGIIPSKEHAKFWIHTSN 120

Query: 121 KYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDYR 162
           KYRFIDQGSNL+GKE+NLT+HWHVMPKTGKMFADKIVM GYRLP++YR
Sbjct: 121 KYRFIDQGSNLRGKEYNLTMHWHVMPKTGKMFADKIVMPGYRLPQEYR 167

[Close]

BLAST of Cla005247 vs. NCBI nr
Match: gi|947047225|gb|KRG96854.1| (hypothetical protein GLYMA_19G236500 [Glycine max])

HSP 1 Score: 270.4 bits (690), Expect = 2.0e-69
Identity = 131/168 (77.98%), Postives = 149/168 (88.69%), Query Frame = 1


Query: 1   MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGNDELT 60
           MHSFGYRANAL+TFAVTIL +MCAMAS SDNFN+P+P+A VQVLNINWFQKQ +GNDE++
Sbjct: 1   MHSFGYRANALLTFAVTILALMCAMASVSDNFNTPTPSAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  -------EMNGLLDFNTSLQVFVFVAAEYETPKNSLNQISLWDGIIPSKENAKFSIHTSN 120
                  ++  L  +NT  QVFVF+AAEYETPKNSLNQISLWDGIIPSKE+AKF IHTSN
Sbjct: 61  MTMNISADLQSLFTWNTK-QVFVFLAAEYETPKNSLNQISLWDGIIPSKEHAKFWIHTSN 120

Query: 121 KYRFIDQGSNLKGKEFNLTLHWHVMPKTGKMFADKIVMTGYRLPEDYR 162
           KYRFIDQGSNL+GKE+NLT+HWHVMPKTGKMFADKIVM GYRLP++YR
Sbjct: 121 KYRFIDQGSNLRGKEYNLTMHWHVMPKTGKMFADKIVMPGYRLPQEYR 167

The following BLAST results are available for this feature:

BLAST of Cla005247 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SPC3B_ARATH	3.0e-65	71.43	Signal peptidase complex subunit 3B OS=Arabidopsis thaliana GN=At5g27430 PE=2 SV...	[more]
SPC3A_ARATH	6.3e-63	69.05	Signal peptidase complex subunit 3A OS=Arabidopsis thaliana GN=At3g05230 PE=2 SV...	[more]
SPCS3_ORYSJ	3.1e-33	45.63	Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica GN=O...	[more]
SPCS3_DICDI	1.6e-13	28.92	Signal peptidase complex subunit 3 OS=Dictyostelium discoideum GN=spcs3 PE=3 SV=...	[more]
SPCS3_DROME	1.0e-12	29.94	Signal peptidase complex subunit 3 OS=Drosophila melanogaster GN=Spase22-23 PE=2...	[more]

BLAST of Cla005247 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZ27_CUCSA	3.6e-73	86.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570170 PE=4 SV=1	[more]
A0A151TW12_CAJCA	4.9e-70	78.57	Signal peptidase complex subunit 3B OS=Cajanus cajan GN=KK1_010496 PE=4 SV=1	[more]
I1NC08_SOYBN	1.4e-69	77.98	Uncharacterized protein OS=Glycine max GN=GLYMA_19G236500 PE=4 SV=1	[more]
A0A151R4G4_CAJCA	1.4e-69	77.98	Signal peptidase complex subunit 3B OS=Cajanus cajan GN=KK1_041379 PE=4 SV=1	[more]
I1JRE6_SOYBN	2.4e-69	77.98	Uncharacterized protein OS=Glycine max GN=GLYMA_03G239600 PE=4 SV=1	[more]

BLAST of Cla005247 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659099567\|ref\|XP_008450666.1\|	2.9e-76	86.31	PREDICTED: signal peptidase complex subunit 3B-like [Cucumis melo]	[more]
gi\|449435691\|ref\|XP_004135628.1\|	1.5e-75	85.12	PREDICTED: signal peptidase complex subunit 3B-like [Cucumis sativus]	[more]
gi\|700210996\|gb\|KGN66092.1\|	5.2e-73	86.34	hypothetical protein Csa_1G570170 [Cucumis sativus]	[more]
gi\|1012360063\|gb\|KYP71247.1\|	7.0e-70	78.57	Signal peptidase complex subunit 3B [Cajanus cajan]	[more]
gi\|947047225\|gb\|KRG96854.1\|	2.0e-69	77.98	hypothetical protein GLYMA_19G236500 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007653	SPC3

Vocabulary: **Cellular Component**
Term	Definition
GO:0005787	signal peptidase complex
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006465	signal peptide processing

Vocabulary: **Molecular Function**
Term	Definition
GO:0008233	peptidase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006465	signal peptide processing
biological_process	GO:0006412	translation
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0045047	protein targeting to ER
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005787	signal peptidase complex
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005783	endoplasmic reticulum
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU37521	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU39061	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU49022	watermelon EST collection version 2.0	transcribed_cluster
WMU49302	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla005247	Cla005247.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU37521	WMU37521	transcribed_cluster
WMU39061	WMU39061	transcribed_cluster
WMU49022	WMU49022	transcribed_cluster
WMU49302	WMU49302	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007653	Signal peptidase 22kDa subunit	PIR	PIRSF016089	SPC3	coord: 1..161 score: 1.1
IPR007653	Signal peptidase 22kDa subunit	PANTHER	PTHR12804	MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23	coord: 2..161 score: 6.0
IPR007653	Signal peptidase 22kDa subunit	PFAM	PF04573	SPC22	coord: 6..158 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla005247	Cla97C03G067210	Watermelon (97103) v2	wmwmbB125
Cla005247	Csa1G570170	Cucumber (Chinese Long) v2	cuwmB020
Cla005247	MELO3C015335	Melon (DHL92) v3.5.1	mewmB271
Cla005247	ClCG03G016860	Watermelon (Charleston Gray)	wcgwmB224
Cla005247	CSPI01G26740	Wild cucumber (PI 183967)	cpiwmB022
Cla005247	Cucsa.182190	Cucumber (Gy14) v1	cgywmB348
Cla005247	CmaCh12G010840	Cucurbita maxima (Rimu)	cmawmB158
Cla005247	CmaCh10G010730	Cucurbita maxima (Rimu)	cmawmB047
Cla005247	CmoCh12G011000	Cucurbita moschata (Rifu)	cmowmB143
Cla005247	CmoCh10G011540	Cucurbita moschata (Rifu)	cmowmB040
Cla005247	Lsi06G001390	Bottle gourd (USVL1VR-Ls)	lsiwmB396
Cla005247	Cp4.1LG18g00720	Cucurbita pepo (Zucchini)	cpewmB358
Cla005247	CsGy1G025970	Cucumber (Gy14) v2	cgybwmB022
Cla005247	MELO3C015335.2	Melon (DHL92) v3.6.1	medwmB262
Cla005247	CsaV3_1G039080	Cucumber (Chinese Long) v3	cucwmB025
Cla005247	Bhi02G001682	Wax gourd	wgowmB656

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla005247	Cucurbita pepo (Zucchini)	cpewmB104
Cla005247	Cucurbita pepo (Zucchini)	cpewmB643
Cla005247	Watermelon (97103) v2	wmwmbB136
Cla005247	Cucurbita maxima (Rimu)	cmawmB092
Cla005247	Cucurbita moschata (Rifu)	cmowmB083