Cla005205 (gene) Watermelon (97103) v1

Overview
NameCla005205
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr3 : 28089859 .. 28090101 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAACAGAGGATGGACTCACGAGAGGATAGGGAGACCGAGAGGAGAGGGAAAGTCGGAGGAGATGGAGAGTTCAAAGTCGGAAGAGAGGGAAAGTTTCTGTCTTTCTGATCTAACTATTGCCGGATCGAAGTGCGAGAGGAGAGGGAGATCAAGAGGAGAGGGAGGGTGTCAGCGAGGTCTAAGACTGAGAGTGAGGGAGGCAGTTGGGCGTGAGGGAGAGGAGAGGTCTGAAGACTGA

mRNA sequence

ATGAAGAACAGAGGATGGACTCACGAGAGGATAGGGAGACCGAGAGGAGAGGGAAAGTCGGAGGAGATGGAGAGTTCAAAGTCGGAAGAGAGGGAAAGTTTCTGTCTTTCTGATCTAACTATTGCCGGATCGAAGTGCGAGAGGAGAGGGAGATCAAGAGGAGAGGGAGGGTGTCAGCGAGGTCTAAGACTGAGAGTGAGGGAGGCAGTTGGGCGTGAGGGAGAGGAGAGGTCTGAAGACTGA

Coding sequence (CDS)

ATGAAGAACAGAGGATGGACTCACGAGAGGATAGGGAGACCGAGAGGAGAGGGAAAGTCGGAGGAGATGGAGAGTTCAAAGTCGGAAGAGAGGGAAAGTTTCTGTCTTTCTGATCTAACTATTGCCGGATCGAAGTGCGAGAGGAGAGGGAGATCAAGAGGAGAGGGAGGGTGTCAGCGAGGTCTAAGACTGAGAGTGAGGGAGGCAGTTGGGCGTGAGGGAGAGGAGAGGTCTGAAGACTGA

Protein sequence

MKNRGWTHERIGRPRGEGKSEEMESSKSEERESFCLSDLTIAGSKCERRGRSRGEGGCQRGLRLRVREAVGREGEERSED
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006412 translation
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003674 molecular_function
molecular_function GO:0003735 structural constituent of ribosome
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU22022watermelon unigene v2 vs TrEMBLtranscribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005205Cla005205.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU22022WMU22022transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla005205Cucumber (Chinese Long) v3cucwmB017
Cla005205Watermelon (97103) v2wmwmbB125
Cla005205Watermelon (97103) v2wmwmbB136
Cla005205Wax gourdwgowmB656
Cla005205Watermelon (97103) v1wmwmB091
Cla005205Cucumber (Gy14) v1cgywmB347
Cla005205Cucurbita maxima (Rimu)cmawmB092
Cla005205Cucurbita maxima (Rimu)cmawmB047
Cla005205Cucurbita maxima (Rimu)cmawmB052
Cla005205Cucurbita maxima (Rimu)cmawmB094
Cla005205Cucurbita maxima (Rimu)cmawmB104
Cla005205Cucurbita moschata (Rifu)cmowmB044
Cla005205Cucurbita moschata (Rifu)cmowmB038
Cla005205Cucurbita moschata (Rifu)cmowmB083
Cla005205Cucurbita moschata (Rifu)cmowmB091
Cla005205Melon (DHL92) v3.5.1mewmB264
Cla005205Melon (DHL92) v3.5.1mewmB404
Cla005205Watermelon (Charleston Gray)wcgwmB224
Cla005205Cucumber (Chinese Long) v2cuwmB012
Cla005205Cucumber (Chinese Long) v2cuwmB115
Cla005205Cucurbita pepo (Zucchini)cpewmB104
Cla005205Cucurbita pepo (Zucchini)cpewmB351
Cla005205Cucurbita pepo (Zucchini)cpewmB643
Cla005205Cucurbita pepo (Zucchini)cpewmB645
Cla005205Cucurbita pepo (Zucchini)cpewmB793
Cla005205Bottle gourd (USVL1VR-Ls)lsiwmB094
Cla005205Bottle gourd (USVL1VR-Ls)lsiwmB392
Cla005205Bottle gourd (USVL1VR-Ls)lsiwmB396
Cla005205Cucumber (Gy14) v2cgybwmB014
Cla005205Melon (DHL92) v3.6.1medwmB255
Cla005205Silver-seed gourdcarwmB0116
Cla005205Silver-seed gourdcarwmB0236
Cla005205Silver-seed gourdcarwmB0464