Cla004921 (gene) Watermelon (97103) v1

Overview
NameCla004921
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionAcidic chitinase (AHRD V1 ***- Q9S7G9_SOYBN); contains Interpro domain(s) IPR001579 Glycoside hydrolase, chitinase active site
LocationChr1 : 467375 .. 468250 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCCACAAAATAACTACAACTCTTTCTATCATCTTTCTCCTCTCCTCCATATTTAGATCTTCGGATGCGGCCGGAATCGCCATCTACTGGGGCCAAAACGGCAACGAAGGCTCTCTTGCCTCCACCTGTGCCACCGGAAACTACAAGTTCGTCAACATAGCATTTCTCTCCTCCTTCGGCAATGGTCAAACCCCGGTCCTCAACCTTGCCGGTCACTGCAACCCTGACAACAACGGTTGCGCTTTTTTGAGCGACGAAATAAATTCTTGCAAAAGTCTAGGCATCAAAGTCCTCCTCTCTATCGGCGGCGGCGCAGGGAGCTATTCACTCTCCTCCGCCGAAGATGCAAGAGACGTCGCAAACTTCCTTTGGAACAACTTCCTCGGCGGGCAGTCGAGTTCGAGGCCACTCGGCGACGCCGTTTTGGACGGCATTGATTTCGATATCGAATCTGGCTCAGGGCAGTGGTGGGACGAACTAGCTCGGCAGCTGAAGGGCTTCGGTCAAGTCCTTCTCTCCGCCGCGCCGCAGTGTCCAATCCCCGACGCACACCTAGACGCGGCCATTAAAACGGGTTTGTTTGATTTCGTTTGGGTTCAATTCTACAACAACCCGCCATGCATGTTTGCAGATAACGCCGACAATCTCCTGAATTCTTGGAGTCAGTGGACGACGTTTCCGGCTGCCAGTCTCTTCATGGGGCTGCCGGCGGCCCCTGAGGCCGCGCCGAGCGGCGGCTTTATTCCGGCGGATGTGCTTATTTCTCAAGTTCTTCCGACCATTAAAACTTCTTCCAACTATGGAGGAGTTATGTTATGGAGCAAGGCGTTTGACAGTGGCTACAGCGACGCCATTAAAGGCAGCATCTGA

mRNA sequence

ATGGCTTCCCACAAAATAACTACAACTCTTTCTATCATCTTTCTCCTCTCCTCCATATTTAGATCTTCGGATGCGGCCGGAATCGCCATCTACTGGGGCCAAAACGGCAACGAAGGCTCTCTTGCCTCCACCTGTGCCACCGGAAACTACAAGTTCGTCAACATAGCATTTCTCTCCTCCTTCGGCAATGGTCAAACCCCGGTCCTCAACCTTGCCGGTCACTGCAACCCTGACAACAACGGTTGCGCTTTTTTGAGCGACGAAATAAATTCTTGCAAAAGTCTAGGCATCAAAGTCCTCCTCTCTATCGGCGGCGGCGCAGGGAGCTATTCACTCTCCTCCGCCGAAGATGCAAGAGACGTCGCAAACTTCCTTTGGAACAACTTCCTCGGCGGGCAGTCGAGTTCGAGGCCACTCGGCGACGCCGTTTTGGACGGCATTGATTTCGATATCGAATCTGGCTCAGGGCAGTGGTGGGACGAACTAGCTCGGCAGCTGAAGGGCTTCGGTCAAGTCCTTCTCTCCGCCGCGCCGCAGTGTCCAATCCCCGACGCACACCTAGACGCGGCCATTAAAACGGGTTTGTTTGATTTCGTTTGGGTTCAATTCTACAACAACCCGCCATGCATGTTTGCAGATAACGCCGACAATCTCCTGAATTCTTGGAGTCAGTGGACGACGTTTCCGGCTGCCAGTCTCTTCATGGGGCTGCCGGCGGCCCCTGAGGCCGCGCCGAGCGGCGGCTTTATTCCGGCGGATGTGCTTATTTCTCAAGTTCTTCCGACCATTAAAACTTCTTCCAACTATGGAGGAGTTATGTTATGGAGCAAGGCGTTTGACAGTGGCTACAGCGACGCCATTAAAGGCAGCATCTGA

Coding sequence (CDS)

ATGGCTTCCCACAAAATAACTACAACTCTTTCTATCATCTTTCTCCTCTCCTCCATATTTAGATCTTCGGATGCGGCCGGAATCGCCATCTACTGGGGCCAAAACGGCAACGAAGGCTCTCTTGCCTCCACCTGTGCCACCGGAAACTACAAGTTCGTCAACATAGCATTTCTCTCCTCCTTCGGCAATGGTCAAACCCCGGTCCTCAACCTTGCCGGTCACTGCAACCCTGACAACAACGGTTGCGCTTTTTTGAGCGACGAAATAAATTCTTGCAAAAGTCTAGGCATCAAAGTCCTCCTCTCTATCGGCGGCGGCGCAGGGAGCTATTCACTCTCCTCCGCCGAAGATGCAAGAGACGTCGCAAACTTCCTTTGGAACAACTTCCTCGGCGGGCAGTCGAGTTCGAGGCCACTCGGCGACGCCGTTTTGGACGGCATTGATTTCGATATCGAATCTGGCTCAGGGCAGTGGTGGGACGAACTAGCTCGGCAGCTGAAGGGCTTCGGTCAAGTCCTTCTCTCCGCCGCGCCGCAGTGTCCAATCCCCGACGCACACCTAGACGCGGCCATTAAAACGGGTTTGTTTGATTTCGTTTGGGTTCAATTCTACAACAACCCGCCATGCATGTTTGCAGATAACGCCGACAATCTCCTGAATTCTTGGAGTCAGTGGACGACGTTTCCGGCTGCCAGTCTCTTCATGGGGCTGCCGGCGGCCCCTGAGGCCGCGCCGAGCGGCGGCTTTATTCCGGCGGATGTGCTTATTTCTCAAGTTCTTCCGACCATTAAAACTTCTTCCAACTATGGAGGAGTTATGTTATGGAGCAAGGCGTTTGACAGTGGCTACAGCGACGCCATTAAAGGCAGCATCTGA

Protein sequence

MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSSFGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARDVANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQCPIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAAPEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI
Homology
[Close]
BLAST of Cla004921 vs. Swiss-Prot
Match: CHIA_CUCSA (Acidic endochitinase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 2.2e-151
Identity = 256/291 (87.97%), Postives = 274/291 (94.16%), Query Frame = 1 

Query: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60
           MA+HKITTTLSI FLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNY+FVNIAFLSS
Sbjct: 1   MAAHKITTTLSIFFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYEFVNIAFLSS 60

Query: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120
           FG+GQ PVLNLAGHCNPDNNGCAFLSDEINSCKS  +KVLLSIGGGAGSYSLSSA+DA+ 
Sbjct: 61  FGSGQAPVLNLAGHCNPDNNGCAFLSDEINSCKSQNVKVLLSIGGGAGSYSLSSADDAKQ 120

Query: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC 180
           VANF+WN++LGGQS SRPLG AVLDG+DFDIESGSGQ+WD LA++LK FGQV+LSAAPQC
Sbjct: 121 VANFIWNSYLGGQSDSRPLGAAVLDGVDFDIESGSGQFWDVLAQELKNFGQVILSAAPQC 180

Query: 181 PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA 240
           PIPDAHLDAAIKTGLFD VWVQFYNNPPCMFADNADNLL+SW+QWT FP + L+MGLPAA
Sbjct: 181 PIPDAHLDAAIKTGLFDSVWVQFYNNPPCMFADNADNLLSSWNQWTAFPTSKLYMGLPAA 240

Query: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI 292
            EAAPSGGFIPADVLISQVLPTIK SSNYGGVMLWSKAFD+GYSD+IKGSI
Sbjct: 241 REAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFDNGYSDSIKGSI 291

[Close]
BLAST of Cla004921 vs. Swiss-Prot
Match: CHIA_PHAAN (Acidic endochitinase OS=Phaseolus angularis PE=2 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 2.3e-111
Identity = 199/295 (67.46%), Postives = 232/295 (78.64%), Query Frame = 1 

Query: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60
           MA  K  + L +  L  S F+ S A GI++YWGQNGNEGSLA  C TGNYK+VNIAFL +
Sbjct: 5   MACLKQVSALLLPLLFISFFKPSHAGGISVYWGQNGNEGSLADACNTGNYKYVNIAFLFT 64

Query: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120
           FG GQTP LNLAGHCNP  N C   SD+I  C+S  IKVLLS+GG +GSYSL+SA+DA  
Sbjct: 65  FGGGQTPQLNLAGHCNPSINNCNVFSDQIKECQSKDIKVLLSLGGASGSYSLTSADDATQ 124

Query: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGF-GQVLLSAAPQ 180
           VAN++WNNFLGGQSSSRPLGDA+LDG+DFDIESG+G+ WD+LAR LKGF  Q+LL+AAPQ
Sbjct: 125 VANYIWNNFLGGQSSSRPLGDAILDGVDFDIESGTGEHWDDLARALKGFNSQLLLTAAPQ 184

Query: 181 CPIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFAD-NADNLLNSWSQWTTFPAASLFMGLP 240
           CPIPDAHLD AIKTGLFD VWVQFYNNPPC ++  N ++L++SW+QWT+  A  LF+G+P
Sbjct: 185 CPIPDAHLDTAIKTGLFDIVWVQFYNNPPCQYSSGNTNDLISSWNQWTSSQAKQLFLGVP 244

Query: 241 AAPEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFD--SGYSDAIKGSI 292
           A+  AA S GFIPADVL SQVLPTIK SS YGGVMLW +  D  SGYS AI GS+
Sbjct: 245 ASTAAAGS-GFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAIIGSV 298

[Close]
BLAST of Cla004921 vs. Swiss-Prot
Match: CHIA_CICAR (Acidic endochitinase OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-110
Identity = 194/284 (68.31%), Postives = 232/284 (81.69%), Query Frame = 1 

Query: 13  IFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSSFGNGQTPVLNLA 72
           + L+S + +SS+AAGIA+YWGQNGNEGSL   C T NY+FVNIAFLS+FGNGQ P +NLA
Sbjct: 11  LLLISLLIKSSNAAGIAVYWGQNGNEGSLQDACNTNNYQFVNIAFLSTFGNGQNPQINLA 70

Query: 73  GHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARDVANFLWNNFLGG 132
           GHC+P  NGC   S EI +C++ GIKVLLS+GGGAGSYSL+SAE+A  +AN+LWNNFLGG
Sbjct: 71  GHCDPSTNGCTKFSPEIQACQAKGIKVLLSLGGGAGSYSLNSAEEATTLANYLWNNFLGG 130

Query: 133 QSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQ--VLLSAAPQCPIPDAHLDAA 192
            S+SRPLGDAVLDGIDFDIESG GQ +DELA+ L GF Q  V LSAAPQCP PDAHLD+A
Sbjct: 131 TSTSRPLGDAVLDGIDFDIESG-GQHYDELAKALNGFSQQKVYLSAAPQCPYPDAHLDSA 190

Query: 193 IKTGLFDFVWVQFYNNPPCMFAD-NADNLLNSWSQWTTFPAASLFMGLPAAPEAAPSGGF 252
           I+TGLFD+VWVQFYNNP C +++ N +NL+N+W+QWT+  A  +F+G+PA+  AAPSGG 
Sbjct: 191 IQTGLFDYVWVQFYNNPQCQYSNGNINNLVNAWNQWTSSQAKQVFLGVPASDAAAPSGGL 250

Query: 253 IPADVLISQVLPTIKTSSNYGGVMLWSKAFD--SGYSDAIKGSI 292
           IPADVL SQVLP IKTS  YGGVM+W +  D  SGYS+AIKGS+
Sbjct: 251 IPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSNAIKGSV 293

[Close]
BLAST of Cla004921 vs. Swiss-Prot
Match: CHIE_BETVU (Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 PE=1 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 9.9e-107
Identity = 193/295 (65.42%), Postives = 228/295 (77.29%), Query Frame = 1 

Query: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60
           MA+  ++    I  L+ + F SS  + I IYWGQNG+EGSLA TC +GNY  V +AF+++
Sbjct: 1   MAAKIVSVLFLISLLIFASFESSHGSQIVIYWGQNGDEGSLADTCNSGNYGTVILAFVAT 60

Query: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120
           FGNGQTP LNLAGHC+P  N C  LS +I +C+  GIKVLLSIGGGAG YSLSS +DA  
Sbjct: 61  FGNGQTPALNLAGHCDPATN-CNSLSSDIKTCQQAGIKVLLSIGGGAGGYSLSSTDDANT 120

Query: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGF--GQ--VLLSA 180
            A++LWN +LGGQSS+RPLGDAVLDGIDFDIESG G++WD+LAR L G   GQ  V LSA
Sbjct: 121 FADYLWNTYLGGQSSTRPLGDAVLDGIDFDIESGDGRFWDDLARALAGHNNGQKTVYLSA 180

Query: 181 APQCPIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMG 240
           APQCP+PDA L  AI TGLFD+VWVQFYNNPPC +  +ADNLL+SW+QWTT  A  +F+G
Sbjct: 181 APQCPLPDASLSTAIATGLFDYVWVQFYNNPPCQYDTSADNLLSSWNQWTTVQANQIFLG 240

Query: 241 LPAAPEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI 292
           LPA+ +AA S GFIPAD L SQVLPTIK S+ YGGVMLWSKA+DSGYS AIK S+
Sbjct: 241 LPASTDAAGS-GFIPADALTSQVLPTIKGSAKYGGVMLWSKAYDSGYSSAIKSSV 293

[Close]
BLAST of Cla004921 vs. Swiss-Prot
Match: CHIA_TOBAC (Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 1.7e-103
Identity = 185/295 (62.71%), Postives = 221/295 (74.92%), Query Frame = 1 

Query: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60
           M  +    T  ++FL +    + D   I IYWGQNGNEGSLA TCAT NY  VNIAFL  
Sbjct: 1   MIKYSFLLTALVLFLRALKLEAGD---IVIYWGQNGNEGSLADTCATNNYAIVNIAFLVV 60

Query: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120
           FGNGQ PVLNLAGHC+P+   C  LS++I +C++ GIKV+LS+GGGAGSY LSSA+DAR+
Sbjct: 61  FGNGQNPVLNLAGHCDPNAGACTGLSNDIRACQNQGIKVMLSLGGGAGSYFLSSADDARN 120

Query: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQ---VLLSAA 180
           VAN+LWNN+LGGQS++RPLGDAVLDGIDFDIE G+ Q WDELA+ L  F Q   V L+AA
Sbjct: 121 VANYLWNNYLGGQSNTRPLGDAVLDGIDFDIEGGTTQHWDELAKTLSQFSQQRKVYLTAA 180

Query: 181 PQCPIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFA-DNADNLLNSWSQWTTFPAASLFMG 240
           PQCP PD  L+ A+ TGLFD+VWVQFYNNPPC ++  +ADNL N W+QW    A  +F+G
Sbjct: 181 PQCPFPDTWLNGALSTGLFDYVWVQFYNNPPCQYSGGSADNLKNYWNQWNAIQAGKIFLG 240

Query: 241 LPAAPEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI 292
           LPAA  AA S GFIP+DVL+SQVLP I  S  YGGVMLWSK +D+GYS AIK ++
Sbjct: 241 LPAAQGAAGS-GFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYDNGYSSAIKANV 291

[Close]
BLAST of Cla004921 vs. TrEMBL
Match: Q09Y38_CITLA (Acidic class III chitinase OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 2.0e-167
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 1 

Query: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60
           MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS
Sbjct: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60

Query: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120
           FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD
Sbjct: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120

Query: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC 180
           VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC
Sbjct: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC 180

Query: 181 PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA 240
           PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA
Sbjct: 181 PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA 240

Query: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI 292
           PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI
Sbjct: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI 291

[Close]
BLAST of Cla004921 vs. TrEMBL
Match: I3RVA1_9ROSI (Acidic class III chitinase OS=Citrullus colocynthis PE=3 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 1.6e-164
Identity = 285/291 (97.94%), Postives = 288/291 (98.97%), Query Frame = 1 

Query: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60
           MA+HKITTTLSIIFLLSSI RSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS
Sbjct: 1   MAAHKITTTLSIIFLLSSILRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60

Query: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120
           FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKS GIKVLLSIGGGAGSYSLSS +DARD
Sbjct: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSQGIKVLLSIGGGAGSYSLSSTDDARD 120

Query: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC 180
           VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC
Sbjct: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC 180

Query: 181 PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA 240
           PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA
Sbjct: 181 PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA 240

Query: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI 292
           PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFD+GYSDAIKGSI
Sbjct: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDNGYSDAIKGSI 291

[Close]
BLAST of Cla004921 vs. TrEMBL
Match: Q9M544_CUCME (Chitinase 1 OS=Cucumis melo PE=2 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 7.8e-151
Identity = 259/291 (89.00%), Postives = 279/291 (95.88%), Query Frame = 1 

Query: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60
           MA+HKITTTLSI FLLSSIFRSS+AAGIAIYWGQNGNEGSLASTCATGNY+FVNIAFLSS
Sbjct: 1   MAAHKITTTLSIFFLLSSIFRSSEAAGIAIYWGQNGNEGSLASTCATGNYEFVNIAFLSS 60

Query: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120
           FG+GQTPVLNLAGHCNPDNNGCAFLSDEINSC+S  +KVLLSIGGGAGSYSLSSA+DAR 
Sbjct: 61  FGSGQTPVLNLAGHCNPDNNGCAFLSDEINSCQSQNVKVLLSIGGGAGSYSLSSADDARQ 120

Query: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC 180
           VANFLWN++LGGQS SRPLG AVL+GIDFDIESGSGQ+WD LA++LK FGQV+LSAAPQC
Sbjct: 121 VANFLWNSYLGGQSDSRPLGAAVLNGIDFDIESGSGQFWDVLAQELKSFGQVILSAAPQC 180

Query: 181 PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA 240
           PIPDAHLDAA+KTGLFD VWVQFYNNPPCMFADNADNLL+SW+QWT FP + L+MGLPAA
Sbjct: 181 PIPDAHLDAAVKTGLFDSVWVQFYNNPPCMFADNADNLLSSWNQWTAFPISKLYMGLPAA 240

Query: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI 292
           PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFD+GYSDAIKGSI
Sbjct: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDNGYSDAIKGSI 291

[Close]
BLAST of Cla004921 vs. TrEMBL
Match: A0A088GK18_CUCMA (Acidic class III chitinase OS=Cucurbita maxima PE=3 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 9.5e-149
Identity = 255/291 (87.63%), Postives = 276/291 (94.85%), Query Frame = 1 

Query: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60
           MA+HKITTTLSI FLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNY+FVNIAFLSS
Sbjct: 1   MAAHKITTTLSIFFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYEFVNIAFLSS 60

Query: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120
           FG+GQ PVLNLAGHCNPDNNGCAFLSDEINSCKS  +KVLLSIGGGAGSYSLSSA+DA+ 
Sbjct: 61  FGSGQAPVLNLAGHCNPDNNGCAFLSDEINSCKSQNVKVLLSIGGGAGSYSLSSADDAKQ 120

Query: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC 180
           VANF+WN++LGGQS SRPLG AVL+G+DFDIESGSGQ+WD LA++LK FGQV+LSAAPQC
Sbjct: 121 VANFIWNSYLGGQSDSRPLGAAVLNGVDFDIESGSGQFWDVLAQELKNFGQVILSAAPQC 180

Query: 181 PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA 240
           PIPDAHLDAAIKTGLFD VWVQFYNNPPCMFADNADNLL+SW+QWT FP + L+MGLPAA
Sbjct: 181 PIPDAHLDAAIKTGLFDSVWVQFYNNPPCMFADNADNLLSSWNQWTAFPTSKLYMGLPAA 240

Query: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI 292
            EAAPSGGFIPADVLISQVLPTIK SSNYGGVMLWSKAFD+GYSD+IKGSI
Sbjct: 241 REAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFDNGYSDSIKGSI 291

[Close]
BLAST of Cla004921 vs. TrEMBL
Match: D6QXZ9_CUCSA (Chitinase OS=Cucumis sativus GN=Csa_5G139760 PE=2 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 2.1e-148
Identity = 255/291 (87.63%), Postives = 275/291 (94.50%), Query Frame = 1 

Query: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60
           MA+HKITTTLSI FLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNY+FVNIAFLSS
Sbjct: 1   MAAHKITTTLSIFFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYEFVNIAFLSS 60

Query: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120
           FG+GQ PVLNLAGHCNPDNNGCAFLSDEINSCKS  +KVLLSIGGGAGSYSLSSA+DA+ 
Sbjct: 61  FGSGQAPVLNLAGHCNPDNNGCAFLSDEINSCKSQNVKVLLSIGGGAGSYSLSSADDAKQ 120

Query: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC 180
           VANF+WN++LGGQS SRPLG AVLDG+DFDIESGSGQ+WD LA++LK FGQV+LSAAPQC
Sbjct: 121 VANFIWNSYLGGQSDSRPLGAAVLDGVDFDIESGSGQFWDVLAQELKNFGQVILSAAPQC 180

Query: 181 PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA 240
           PIPDA LDAAIKTGLFD VWVQFYNNPPCMFADNADNLL+SW+QWT FP + L+MGLPAA
Sbjct: 181 PIPDAQLDAAIKTGLFDSVWVQFYNNPPCMFADNADNLLSSWNQWTAFPTSKLYMGLPAA 240

Query: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI 292
            EAAPSGGFIPADVLISQVLPTIK SSNYGGVMLWSKAFD+GYSD+IKGSI
Sbjct: 241 REAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFDNGYSDSIKGSI 291

[Close]
BLAST of Cla004921 vs. NCBI nr
Match: gi|75708015|gb|ABA26457.1| (acidic class III chitinase [Citrullus lanatus])

HSP 1 Score: 596.3 bits (1536), Expect = 2.9e-167
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 1 

Query: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60
           MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS
Sbjct: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60

Query: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120
           FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD
Sbjct: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120

Query: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC 180
           VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC
Sbjct: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC 180

Query: 181 PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA 240
           PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA
Sbjct: 181 PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA 240

Query: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI 292
           PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI
Sbjct: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI 291

[Close]
BLAST of Cla004921 vs. NCBI nr
Match: gi|388458933|gb|AFK31317.1| (acidic class III chitinase [Citrullus colocynthis])

HSP 1 Score: 586.6 bits (1511), Expect = 2.3e-164
Identity = 285/291 (97.94%), Postives = 288/291 (98.97%), Query Frame = 1 

Query: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60
           MA+HKITTTLSIIFLLSSI RSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS
Sbjct: 1   MAAHKITTTLSIIFLLSSILRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60

Query: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120
           FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKS GIKVLLSIGGGAGSYSLSS +DARD
Sbjct: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSQGIKVLLSIGGGAGSYSLSSTDDARD 120

Query: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC 180
           VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC
Sbjct: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC 180

Query: 181 PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA 240
           PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA
Sbjct: 181 PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA 240

Query: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI 292
           PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFD+GYSDAIKGSI
Sbjct: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDNGYSDAIKGSI 291

[Close]
BLAST of Cla004921 vs. NCBI nr
Match: gi|659074352|ref|XP_008437557.1| (PREDICTED: acidic endochitinase [Cucumis melo])

HSP 1 Score: 544.3 bits (1401), Expect = 1.3e-151
Identity = 260/291 (89.35%), Postives = 280/291 (96.22%), Query Frame = 1 

Query: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60
           MA+HKITTTLSI FLLSSIFRSS+AAGIAIYWGQNGNEGSLASTCATGNY+FVNIAFLSS
Sbjct: 1   MAAHKITTTLSIFFLLSSIFRSSEAAGIAIYWGQNGNEGSLASTCATGNYEFVNIAFLSS 60

Query: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120
           FG+GQTPVLNLAGHCNPDNNGCAFLSDEINSC+S  +KVLLSIGGGAGSYSLSSA+DAR 
Sbjct: 61  FGSGQTPVLNLAGHCNPDNNGCAFLSDEINSCQSQNVKVLLSIGGGAGSYSLSSADDARQ 120

Query: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC 180
           VANFLWN++LGGQS SRPLG AVL+GIDFDIESGSGQ+WD LA++LK FGQV+LSAAPQC
Sbjct: 121 VANFLWNSYLGGQSDSRPLGAAVLNGIDFDIESGSGQFWDVLAQELKSFGQVILSAAPQC 180

Query: 181 PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA 240
           PIPDAHLDAA+KTGLFDFVWVQFYNNPPCMFADNADNLL+SW+QWT FP + L+MGLPAA
Sbjct: 181 PIPDAHLDAAVKTGLFDFVWVQFYNNPPCMFADNADNLLSSWNQWTAFPISKLYMGLPAA 240

Query: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI 292
           PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFD+GYSDAIKGSI
Sbjct: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDNGYSDAIKGSI 291

[Close]
BLAST of Cla004921 vs. NCBI nr
Match: gi|7595839|gb|AAF64474.1|AF241266_1 (chitinase 1 [Cucumis melo])

HSP 1 Score: 541.2 bits (1393), Expect = 1.1e-150
Identity = 259/291 (89.00%), Postives = 279/291 (95.88%), Query Frame = 1 

Query: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60
           MA+HKITTTLSI FLLSSIFRSS+AAGIAIYWGQNGNEGSLASTCATGNY+FVNIAFLSS
Sbjct: 1   MAAHKITTTLSIFFLLSSIFRSSEAAGIAIYWGQNGNEGSLASTCATGNYEFVNIAFLSS 60

Query: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120
           FG+GQTPVLNLAGHCNPDNNGCAFLSDEINSC+S  +KVLLSIGGGAGSYSLSSA+DAR 
Sbjct: 61  FGSGQTPVLNLAGHCNPDNNGCAFLSDEINSCQSQNVKVLLSIGGGAGSYSLSSADDARQ 120

Query: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC 180
           VANFLWN++LGGQS SRPLG AVL+GIDFDIESGSGQ+WD LA++LK FGQV+LSAAPQC
Sbjct: 121 VANFLWNSYLGGQSDSRPLGAAVLNGIDFDIESGSGQFWDVLAQELKSFGQVILSAAPQC 180

Query: 181 PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA 240
           PIPDAHLDAA+KTGLFD VWVQFYNNPPCMFADNADNLL+SW+QWT FP + L+MGLPAA
Sbjct: 181 PIPDAHLDAAVKTGLFDSVWVQFYNNPPCMFADNADNLLSSWNQWTAFPISKLYMGLPAA 240

Query: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI 292
           PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFD+GYSDAIKGSI
Sbjct: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDNGYSDAIKGSI 291

[Close]
BLAST of Cla004921 vs. NCBI nr
Match: gi|116328|sp|P17541.1|CHIA_CUCSA (RecName: Full=Acidic endochitinase; Flags: Precursor)

HSP 1 Score: 536.2 bits (1380), Expect = 3.6e-149
Identity = 256/291 (87.97%), Postives = 276/291 (94.85%), Query Frame = 1 

Query: 1   MASHKITTTLSIIFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYKFVNIAFLSS 60
           MA+HKITTTLSI FLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNY+FVNIAFLSS
Sbjct: 1   MAAHKITTTLSIFFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYEFVNIAFLSS 60

Query: 61  FGNGQTPVLNLAGHCNPDNNGCAFLSDEINSCKSLGIKVLLSIGGGAGSYSLSSAEDARD 120
           FG+GQ PVLNLAGHCNPDNNGCAFLSDEINSCKS  +KVLLSIGGGAGSYSLSSA+DA+ 
Sbjct: 61  FGSGQAPVLNLAGHCNPDNNGCAFLSDEINSCKSQNVKVLLSIGGGAGSYSLSSADDAKQ 120

Query: 121 VANFLWNNFLGGQSSSRPLGDAVLDGIDFDIESGSGQWWDELARQLKGFGQVLLSAAPQC 180
           VANF+WN++LGGQS SRPLG AVLDG+DFDIESGSGQ+WD LA++LK FGQV+LSAAPQC
Sbjct: 121 VANFIWNSYLGGQSDSRPLGAAVLDGVDFDIESGSGQFWDVLAQELKNFGQVILSAAPQC 180

Query: 181 PIPDAHLDAAIKTGLFDFVWVQFYNNPPCMFADNADNLLNSWSQWTTFPAASLFMGLPAA 240
           PIPDAHLDAAIKTGLFD VWVQFYNNPPCMFADNADNLL+SW+QWT FP + L+MGLPAA
Sbjct: 181 PIPDAHLDAAIKTGLFDSVWVQFYNNPPCMFADNADNLLSSWNQWTAFPTSKLYMGLPAA 240

Query: 241 PEAAPSGGFIPADVLISQVLPTIKTSSNYGGVMLWSKAFDSGYSDAIKGSI 292
            EAAPSGGFIPADVLISQVLPTIK SSNYGGVMLWSKAFD+GYSD+IKGSI
Sbjct: 241 REAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFDNGYSDSIKGSI 291

The following BLAST results are available for this feature:
BLAST of Cla004921 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHIA_CUCSA2.2e-15187.97Acidic endochitinase OS=Cucumis sativus PE=1 SV=1[more]
CHIA_PHAAN2.3e-11167.46Acidic endochitinase OS=Phaseolus angularis PE=2 SV=1[more]
CHIA_CICAR1.1e-11068.31Acidic endochitinase OS=Cicer arietinum PE=2 SV=1[more]
CHIE_BETVU9.9e-10765.42Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 PE=1 SV=1[more]
CHIA_TOBAC1.7e-10362.71Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1[more]
BLAST of Cla004921 vs. TrEMBL
Match NameE-valueIdentityDescription
Q09Y38_CITLA2.0e-167100.00Acidic class III chitinase OS=Citrullus lanatus PE=2 SV=1[more]
I3RVA1_9ROSI1.6e-16497.94Acidic class III chitinase OS=Citrullus colocynthis PE=3 SV=1[more]
Q9M544_CUCME7.8e-15189.00Chitinase 1 OS=Cucumis melo PE=2 SV=1[more]
A0A088GK18_CUCMA9.5e-14987.63Acidic class III chitinase OS=Cucurbita maxima PE=3 SV=1[more]
D6QXZ9_CUCSA2.1e-14887.63Chitinase OS=Cucumis sativus GN=Csa_5G139760 PE=2 SV=1[more]
BLAST of Cla004921 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|75708015|gb|ABA26457.1|2.9e-167100.00acidic class III chitinase [Citrullus lanatus][more]
gi|388458933|gb|AFK31317.1|2.3e-16497.94acidic class III chitinase [Citrullus colocynthis][more]
gi|659074352|ref|XP_008437557.1|1.3e-15189.35PREDICTED: acidic endochitinase [Cucumis melo][more]
gi|7595839|gb|AAF64474.1|AF241266_11.1e-15089.00chitinase 1 [Cucumis melo][more]
gi|116328|sp|P17541.1|CHIA_CUCSA3.6e-14987.97RecName: Full=Acidic endochitinase; Flags: Precursor[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001223Glyco_hydro18_cat
IPR001579Glyco_hydro_18_chit_AS
IPR013781Glycoside hydrolase, catalytic domain
IPR017853Glycoside_hydrolase_SF
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0006032 chitin catabolic process
biological_process GO:0000272 polysaccharide catabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005615 extracellular space
cellular_component GO:0005575 cellular_component
molecular_function GO:0004568 chitinase activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla004921Cla004921.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001223Glycoside hydrolase family 18, catalytic domainPFAMPF00704Glyco_hydro_18coord: 28..277
score: 1.8
IPR001579Glycoside hydrolase, chitinase active sitePROSITEPS01095CHITINASE_18coord: 144..152
scor
IPR013781Glycoside hydrolase, catalytic domainGENE3DG3DSA:3.20.20.80coord: 24..282
score: 7.1
IPR017853Glycoside hydrolase superfamilyunknownSSF51445(Trans)glycosidasescoord: 25..281
score: 1.53
NoneNo IPR availablePANTHERPTHR11177CHITINASEcoord: 1..291
score: 1.2E
NoneNo IPR availablePANTHERPTHR11177:SF161SUBFAMILY NOT NAMEDcoord: 1..291
score: 1.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla004921Csa3G120470Cucumber (Chinese Long) v2cuwmB258
Cla004921MELO3C006069Melon (DHL92) v3.5.1mewmB478
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cla004921Cla021196Watermelon (97103) v1wmwmB119
The following block(s) are covering this gene:
GeneOrganismBlock
Cla004921Watermelon (97103) v2wmwmbB235
Cla004921Watermelon (97103) v2wmwmbB262
Cla004921Watermelon (97103) v2wmwmbB268
Cla004921Wax gourdwgowmB228
Cla004921Watermelon (97103) v1wmwmB125
Cla004921Watermelon (97103) v1wmwmB142
Cla004921Cucumber (Gy14) v1cgywmB151
Cla004921Cucumber (Gy14) v1cgywmB400
Cla004921Cucumber (Gy14) v1cgywmB481
Cla004921Cucurbita maxima (Rimu)cmawmB272
Cla004921Cucurbita maxima (Rimu)cmawmB318
Cla004921Cucurbita maxima (Rimu)cmawmB388
Cla004921Cucurbita maxima (Rimu)cmawmB574
Cla004921Cucurbita moschata (Rifu)cmowmB234
Cla004921Cucurbita moschata (Rifu)cmowmB262
Cla004921Cucurbita moschata (Rifu)cmowmB312
Cla004921Cucurbita moschata (Rifu)cmowmB380
Cla004921Cucurbita moschata (Rifu)cmowmB567
Cla004921Melon (DHL92) v3.5.1mewmB029
Cla004921Watermelon (Charleston Gray)wcgwmB295
Cla004921Melon (DHL92) v3.5.1mewmB482
Cla004921Watermelon (Charleston Gray)wcgwmB142
Cla004921Watermelon (Charleston Gray)wcgwmB152
Cla004921Watermelon (Charleston Gray)wcgwmB299
Cla004921Cucumber (Chinese Long) v2cuwmB408
Cla004921Cucurbita pepo (Zucchini)cpewmB035
Cla004921Cucurbita pepo (Zucchini)cpewmB187
Cla004921Cucurbita pepo (Zucchini)cpewmB229
Cla004921Cucurbita pepo (Zucchini)cpewmB616
Cla004921Cucurbita pepo (Zucchini)cpewmB708
Cla004921Bottle gourd (USVL1VR-Ls)lsiwmB027
Cla004921Bottle gourd (USVL1VR-Ls)lsiwmB374
Cla004921Bottle gourd (USVL1VR-Ls)lsiwmB375
Cla004921Cucumber (Gy14) v2cgybwmB243
Cla004921Cucumber (Gy14) v2cgybwmB306
Cla004921Cucumber (Gy14) v2cgybwmB381
Cla004921Melon (DHL92) v3.6.1medwmB027
Cla004921Melon (DHL92) v3.6.1medwmB465
Cla004921Melon (DHL92) v3.6.1medwmB471
Cla004921Melon (DHL92) v3.6.1medwmB517
Cla004921Silver-seed gourdcarwmB0294
Cla004921Silver-seed gourdcarwmB0504
Cla004921Silver-seed gourdcarwmB0537
Cla004921Silver-seed gourdcarwmB0991
Cla004921Cucumber (Chinese Long) v3cucwmB267
Cla004921Cucumber (Chinese Long) v3cucwmB345
Cla004921Cucumber (Chinese Long) v3cucwmB433