Cla004239 (gene) Watermelon (97103) v1

NameCla004239
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr5 : 9055595 .. 9055876 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAAAAAGTTTTTTTTTTTCTTCTTCGCACCGCCGACGGCTCTCTCTCCGTTCACGCTACCGCCCCTGTGCTTCCTCAGACCGCCAGCCGCCAGCCCATCTCGCCGTTTGCACGCCGCCGCCGCGTTGTCGTTCGGTAGCCGCTCGCCCGCACTGTCGCCCAGCCCGTGCGCCGTCGCCTCCGCCATCCGCCGGCTGCGTCTGCGTTTTTCGCTGGTTGCAAGCTTCCGGCCGTCGTGAGCCGTTCTACCTTCCAACCGCCGGATTCCGTCGGTATTAA

mRNA sequence

ATGTTAAAAAGTTTTTTTTTTTCTTCTTCGCACCGCCGACGGCTCTCTCTCCGTTCACGCTACCGCCCCTGTGCTTCCTCAGACCGCCAGCCGCCAGCCCATCTCGCCGTTTGCACGCCGCCGCCGCGTTGTCGTTCGGTAGCCGCTCGCCCGCACTGTCGCCCAGCCCGTGCGCCGTCGCCTCCGCCATCCGCCGGCTGCGTCTGCGTTTTTCGCTGGTTGCAAGCTTCCGGCCGTCGTGAGCCGTTCTACCTTCCAACCGCCGGATTCCGTCGGTATTAA

Coding sequence (CDS)

ATGTTAAAAAGTTTTTTTTTTTCTTCTTCGCACCGCCGACGGCTCTCTCTCCGTTCACGCTACCGCCCCTGTGCTTCCTCAGACCGCCAGCCGCCAGCCCATCTCGCCGTTTGCACGCCGCCGCCGCGTTGTCGTTCGGTAGCCGCTCGCCCGCACTGTCGCCCAGCCCGTGCGCCGTCGCCTCCGCCATCCGCCGGCTGCGTCTGCGTTTTTCGCTGGTTGCAAGCTTCCGGCCGTCGTGAGCCGTTCTACCTTCCAACCGCCGGATTCCGTCGGTATTAA

Protein sequence

MLKSFFFSSSHRRRLSLRSRYRPCASSDRQPPAHLAVCTPPPRCRSVAARPHCRPARAPSPPPSAGCVCVFRWLQASGRREPFYLPTAGFRRY
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU15375watermelon EST collection version 2.0transcribed_cluster
WMU78910watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla004239Cla004239.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU78910WMU78910transcribed_cluster
WMU15375WMU15375transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla004239Cla97C05G091030Watermelon (97103) v2wmwmbB206
Cla004239ClCG05G008790Watermelon (Charleston Gray)wcgwmB286
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla004239Melon (DHL92) v3.6.1medwmB014
Cla004239Melon (DHL92) v3.6.1medwmB315
Cla004239Melon (DHL92) v3.6.1medwmB448
Cla004239Melon (DHL92) v3.6.1medwmB460
Cla004239Melon (DHL92) v3.6.1medwmB456
Cla004239Silver-seed gourdcarwmB0503
Cla004239Silver-seed gourdcarwmB0536
Cla004239Silver-seed gourdcarwmB0990
Cla004239Cucumber (Chinese Long) v3cucwmB260
Cla004239Cucumber (Chinese Long) v3cucwmB263
Cla004239Cucumber (Chinese Long) v3cucwmB430
Cla004239Watermelon (97103) v2wmwmbB192
Cla004239Watermelon (97103) v2wmwmbB210
Cla004239Wax gourdwgowmB063
Cla004239Wax gourdwgowmB202
Cla004239Watermelon (97103) v1wmwmB118
Cla004239Watermelon (97103) v1wmwmB125
Cla004239Cucumber (Gy14) v1cgywmB397
Cla004239Cucumber (Gy14) v1cgywmB477
Cla004239Cucurbita maxima (Rimu)cmawmB269
Cla004239Cucurbita maxima (Rimu)cmawmB316
Cla004239Cucurbita maxima (Rimu)cmawmB373
Cla004239Cucurbita maxima (Rimu)cmawmB564
Cla004239Cucurbita moschata (Rifu)cmowmB260
Cla004239Cucurbita moschata (Rifu)cmowmB310
Cla004239Cucurbita moschata (Rifu)cmowmB366
Cla004239Cucurbita moschata (Rifu)cmowmB558
Cla004239Melon (DHL92) v3.5.1mewmB469
Cla004239Melon (DHL92) v3.5.1mewmB018
Cla004239Melon (DHL92) v3.5.1mewmB461
Cla004239Melon (DHL92) v3.5.1mewmB466
Cla004239Watermelon (Charleston Gray)wcgwmB136
Cla004239Cucumber (Chinese Long) v2cuwmB252
Cla004239Cucumber (Chinese Long) v2cuwmB402
Cla004239Cucurbita pepo (Zucchini)cpewmB032
Cla004239Cucurbita pepo (Zucchini)cpewmB179
Cla004239Cucurbita pepo (Zucchini)cpewmB227
Cla004239Cucurbita pepo (Zucchini)cpewmB705
Cla004239Bottle gourd (USVL1VR-Ls)lsiwmB023
Cla004239Bottle gourd (USVL1VR-Ls)lsiwmB361
Cla004239Bottle gourd (USVL1VR-Ls)lsiwmB364
Cla004239Cucumber (Gy14) v2cgybwmB238
Cla004239Cucumber (Gy14) v2cgybwmB239
Cla004239Cucumber (Gy14) v2cgybwmB379