Cla004142 (gene) Watermelon (97103) v1

Overview
NameCla004142
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr11 : 6210349 .. 6210540 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGATGAACTCCTCGATCGTCGCACGAACGTCTCTCTACCCAGCAAAGCTAACATGGAACTCTTGCAAGAAGAGACTCTACATCGTCCTCGCATACTGGCAGTCCCAAAGGAGATTGATCCAAATCTTCCTCTACCTTCCGACAAAGAATACAACAGAAAGGCCCCACAAGCGAAGTTCTACTCCTAA

mRNA sequence

ATGGAGGATGAACTCCTCGATCGTCGCACGAACGTCTCTCTACCCAGCAAAGCTAACATGGAACTCTTGCAAGAAGAGACTCTACATCGTCCTCGCATACTGGCAGTCCCAAAGGAGATTGATCCAAATCTTCCTCTACCTTCCGACAAAGAATACAACAGAAAGGCCCCACAAGCGAAGTTCTACTCCTAA

Coding sequence (CDS)

ATGGAGGATGAACTCCTCGATCGTCGCACGAACGTCTCTCTACCCAGCAAAGCTAACATGGAACTCTTGCAAGAAGAGACTCTACATCGTCCTCGCATACTGGCAGTCCCAAAGGAGATTGATCCAAATCTTCCTCTACCTTCCGACAAAGAATACAACAGAAAGGCCCCACAAGCGAAGTTCTACTCCTAA

Protein sequence

MEDELLDRRTNVSLPSKANMELLQEETLHRPRILAVPKEIDPNLPLPSDKEYNRKAPQAKFYS
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006376 mRNA splice site selection
cellular_component GO:0005575 cellular_component
cellular_component GO:0005685 U1 snRNP
molecular_function GO:0003674 molecular_function
molecular_function GO:0003729 mRNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU56119watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla004142Cla004142.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU56119WMU56119transcribed_cluster