Cla004118 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla004118
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	B3 domain-containing protein At1g20600 (AHRD V1 ***- Y1060_ARATH)
Location	Chr6 : 13131033 .. 13131704 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAAGGTACGTTACACGTACAATAACAAGATAGTTGAGAAGGATGTGTACGAAACAGCTTTGATTATTTGTGACATAAAGAGTAAAAGCATGGAACCATTTGAGTTGATGGAGTTGATGCGGCGTTTGAAAACTCGATTTCCAGGTTCAACTTCCACTACTTCTATAGGAAATGAGCAACCACCTGTAATCAACAACAATCAAAATGTGGCAGCGGTGCTTGGTGGGGCTGGGGATAGAATTCTTCGGCTACTACCTGGTGGAGCTTTGGATAGACTTCCGCCGGTGGCGGTGATCAGAAACGTAATTGGAGTGTGTAGTCGGGCGTTTGTGAAGCAATTAACAAAAAGCGATTTGACAGATGGGTTAGGGAGATTGGCACTTCATAAGGAATTTGTGAATCGTGATTTGGTTCCAATGTTCAATGATAATGAGGATTTGGTTGAGGGAATTGATGTTATAGCTTTTGATAGTGAAGGGAGGCAATACGACATGACGTTCAAGCTTTGGACTTCTAAGCTTTACGTGCTCACCAAAAGTTGGAAGGAGTTTTACAAGACCAATAATTTGACACAATCTGGTGAGTACGTCACTGTTTGGATGTTTCGACATGTCGTCAATCACAATCTTTGCTTTGCTATTATTCAAGGAAGGTTTGAACGACCTTGA

mRNA sequence

ATGGTTAAGGTACGTTACACGTACAATAACAAGATAGTTGAGAAGGATGTGTACGAAACAGCTTTGATTATTTGTGACATAAAGAGTAAAAGCATGGAACCATTTGAGTTGATGGAGTTGATGCGGCGTTTGAAAACTCGATTTCCAGGTTCAACTTCCACTACTTCTATAGGAAATGAGCAACCACCTGTAATCAACAACAATCAAAATGTGGCAGCGGTGCTTGGTGGGGCTGGGGATAGAATTCTTCGGCTACTACCTGGTGGAGCTTTGGATAGACTTCCGCCGGTGGCGGTGATCAGAAACGTAATTGGAGTGTGTAGTCGGGCGTTTGTGAAGCAATTAACAAAAAGCGATTTGACAGATGGGTTAGGGAGATTGGCACTTCATAAGGAATTTGTGAATCGTGATTTGGTTCCAATGTTCAATGATAATGAGGATTTGGTTGAGGGAATTGATGTTATAGCTTTTGATAGTGAAGGGAGGCAATACGACATGACGTTCAAGCTTTGGACTTCTAAGCTTTACGTGCTCACCAAAAGTTGGAAGGAGTTTTACAAGACCAATAATTTGACACAATCTGGTGAGTACGTCACTGTTTGGATGTTTCGACATGTCGTCAATCACAATCTTTGCTTTGCTATTATTCAAGGAAGGTTTGAACGACCTTGA

Coding sequence (CDS)

ATGGTTAAGGTACGTTACACGTACAATAACAAGATAGTTGAGAAGGATGTGTACGAAACAGCTTTGATTATTTGTGACATAAAGAGTAAAAGCATGGAACCATTTGAGTTGATGGAGTTGATGCGGCGTTTGAAAACTCGATTTCCAGGTTCAACTTCCACTACTTCTATAGGAAATGAGCAACCACCTGTAATCAACAACAATCAAAATGTGGCAGCGGTGCTTGGTGGGGCTGGGGATAGAATTCTTCGGCTACTACCTGGTGGAGCTTTGGATAGACTTCCGCCGGTGGCGGTGATCAGAAACGTAATTGGAGTGTGTAGTCGGGCGTTTGTGAAGCAATTAACAAAAAGCGATTTGACAGATGGGTTAGGGAGATTGGCACTTCATAAGGAATTTGTGAATCGTGATTTGGTTCCAATGTTCAATGATAATGAGGATTTGGTTGAGGGAATTGATGTTATAGCTTTTGATAGTGAAGGGAGGCAATACGACATGACGTTCAAGCTTTGGACTTCTAAGCTTTACGTGCTCACCAAAAGTTGGAAGGAGTTTTACAAGACCAATAATTTGACACAATCTGGTGAGTACGTCACTGTTTGGATGTTTCGACATGTCGTCAATCACAATCTTTGCTTTGCTATTATTCAAGGAAGGTTTGAACGACCTTGA

Protein sequence

MVKVRYTYNNKIVEKDVYETALIICDIKSKSMEPFELMELMRRLKTRFPGSTSTTSIGNEQPPVINNNQNVAAVLGGAGDRILRLLPGGALDRLPPVAVIRNVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEGRQYDMTFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAIIQGRFERP

Homology

[Close]

BLAST of Cla004118 vs. Swiss-Prot
Match: Y4317_ARATH (Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana GN=At4g03170 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.9e-17
Identity = 47/114 (41.23%), Postives = 63/114 (55.26%), Query Frame = 1


Query: 108 SRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEGRQYDMT 167
           SR   KQL  SD+      L L KE V   ++P   D+E+ V+GIDV  +  +G+   M 
Sbjct: 133 SRPIKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVYGPDGKVQQME 192

Query: 168 FKLWTS-KLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAIIQGRF 221
           FK+W   K  VLT  WK+F +   L+ + ++VTVWMFRH+    LCFAI   +F
Sbjct: 193 FKMWNGDKTPVLTSGWKQFVEDYGLSMTCDFVTVWMFRHIKTRKLCFAIHYVKF 246

[Close]

BLAST of Cla004118 vs. Swiss-Prot
Match: Y4316_ARATH (Putative B3 domain-containing protein At4g03160 OS=Arabidopsis thaliana GN=At4g03160 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.4e-12
Identity = 38/112 (33.93%), Postives = 56/112 (50.00%), Query Frame = 1


Query: 109 RAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEGRQYDMTF 168
           R   +QL  SD+ D   RL L KE V + +  +    +   +G++V  +   G  + M  
Sbjct: 63  RKVAEQLMDSDVKDNQYRLMLGKEPVKKMMDALGKTEKLGTKGLNVSVYGPNGENHKMVL 122

Query: 169 KLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAIIQGRF 221
           K+W     VLT  WK F K+  L +  +++T+WMFRH     +CFAI   RF
Sbjct: 123 KIWIKGTPVLTSGWKNFVKSYKLEKHVDFLTIWMFRHKKTREICFAIDSTRF 174

[Close]

BLAST of Cla004118 vs. Swiss-Prot
Match: Y1060_ARATH (B3 domain-containing protein At1g20600 OS=Arabidopsis thaliana GN=At1g20600 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.0e-10
Identity = 43/142 (30.28%), Postives = 65/142 (45.77%), Query Frame = 1


Query: 61  QPPVINNNQNVAAVLGGAGDRILRLLPGGALDRLPPVAVIRN--VIGVCSRAFVKQLTKS 120
           QP  + N   +   +    +  LRL+       L P  +  +  V    SR   KQL  S
Sbjct: 73  QPKRVKNQNIMKINIHDFSEETLRLIEDWYNAELDPQDIFGDDEVTRRFSRPIKKQLMSS 132

Query: 121 DLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEGRQYDMTFKLWT-SKLYV 180
           D+     RL L KE V   ++P   ++ED V+G+DV  +  +G    M FK+W   K  V
Sbjct: 133 DVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVSVYGPDGEVQQMKFKMWNGDKTPV 192

Query: 181 LTKSWKEFYKTNNLTQSGEYVT 200
           LT  W +F     L ++ ++VT
Sbjct: 193 LTSGWMQFVADYGLLKTSDFVT 214

[Close]

BLAST of Cla004118 vs. TrEMBL
Match: A0A0A0L7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073910 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 8.0e-63
Identity = 134/238 (56.30%), Postives = 167/238 (70.17%), Query Frame = 1


Query: 1   MVKVRYTYNNKIVEKDVYETALIICDIK-SKSMEPFELMELMRRLKTRFPGSTSTTSIGN 60
           MV V YTYNNKIV +DVY+ +LI+ D+  SKS+EPFE  E + R   +   S+++TS+ N
Sbjct: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFE--EPIDRFNNQL--SSTSTSLVN 60

Query: 61  EQPPVIN------------------NNQNVAAVLGGAGDRILRLLPGGALDRLPPVAVIR 120
           EQ PV+N                  NN+NVAA +    D+           R PP+AVI+
Sbjct: 61  EQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQ----------GRFPPMAVIQ 120

Query: 121 NVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEG 180
           N+IG CS  FVKQLTK+D+TD  GRLALHKEFVN +L PMFND+EDL +GI VI +D EG
Sbjct: 121 NIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEG 180

Query: 181 RQYDMTFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAIIQGR 220
           R+YDM FKLW SKLYVLTKSWKEFYKTN+LTQ GE+++VWMFRHVV   LCFAI++G+
Sbjct: 181 REYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQ 224

[Close]

BLAST of Cla004118 vs. TrEMBL
Match: A0A0A0LC65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G609250 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.8e-43
Identity = 84/126 (66.67%), Postives = 104/126 (82.54%), Query Frame = 1


Query: 97  VAVIRNVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIA 156
           +AVI+N+IG CS  FVKQL K+D+T+  GRLALHKEFV R+L+PMFN  E+L  GI V  
Sbjct: 1   MAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTV 60

Query: 157 FDSEGRQYDMTFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAII 216
           +DSEGR+YDM FK WTSKLYVLTKSW +FYK+NNLT+ GE+++VWMFRHVVN  LCFAI+
Sbjct: 61  YDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIM 120

Query: 217 QGRFER 223
           +G  E+
Sbjct: 121 RGDAEQ 126

[Close]

BLAST of Cla004118 vs. TrEMBL
Match: A0A061FAT0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_033025 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 9.8e-29
Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 1


Query: 94  LPPVAVIRNVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGID 153
           +PPVA + ++IG CSR + KQLT++DL D   RL+L+K  V +  +P+  ++ED+ +GI 
Sbjct: 80  IPPVATLAHLIGECSRPYSKQLTETDLKDNQIRLSLNKNHVGKSFIPLLKEHEDVNKGIQ 139

Query: 154 VIAFDSEGRQYDMTFKLWTSKLYVLTKS-WKEFYKTNNLTQSGEYVTVWMFRHVVNHNLC 213
           VI +D EG++Y M F  WTSK+YVLT S WK FYK + L +S + VTVWMFRH   HNLC
Sbjct: 140 VITYDPEGKEYPMKFVFWTSKMYVLTTSGWKRFYKDHALKES-DIVTVWMFRHRHTHNLC 199

Query: 214 FAI 216
           FAI
Sbjct: 200 FAI 201

[Close]

BLAST of Cla004118 vs. TrEMBL
Match: M5VSG9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023842mg PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.3e-24
Identity = 53/122 (43.44%), Postives = 83/122 (68.03%), Query Frame = 1


Query: 94  LPPVAVIRNVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGID 153
           LPP+  ++N+I  CS+ F KQLT+SD+ +   RL+++KE V  +++P+  + ++  EGID
Sbjct: 98  LPPIPSLQNLIQDCSKPFEKQLTRSDVKEDQCRLSMNKEDVEYNIMPLLRNGDNFNEGID 157

Query: 154 VIAFDSEGRQYDMTFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCF 213
           V  +D  G +Y M FK+W +K++VLT  WK F     L ++ ++VT+W+FRHV N  LCF
Sbjct: 158 VTTYDMAGTEYPMVFKIWATKIHVLTGGWKTFCNDLGLVENQDFVTLWVFRHVDNGGLCF 217

Query: 214 AI 216
           AI
Sbjct: 218 AI 219

[Close]

BLAST of Cla004118 vs. TrEMBL
Match: B9N1E3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s40760g PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.6e-24
Identity = 53/133 (39.85%), Postives = 84/133 (63.16%), Query Frame = 1


Query: 83  LRLLPGGALDRLPPVAVIRNVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMF 142
           LRL+       +P +  +  +IG CS+ F KQLT+SDL D   RL+++K    + L P+ 
Sbjct: 119 LRLIENYDPHEVPSIPGLNGIIGRCSKPFEKQLTESDLRDDQSRLSINKADAQKYLYPLL 178

Query: 143 NDNEDLVEGIDVIAFDSEGRQYDMTFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWM 202
           N++E+L EGI+V  +D  G++++M FK+W SK++VL   WK F+  + L +  ++VT+WM
Sbjct: 179 NEDENLAEGINVTTYDPNGKEFEMVFKIWVSKIHVLIGGWKAFFHEHQLRKDQDFVTLWM 238

Query: 203 FRHVVNHNLCFAI 216
           FR +    LCF I
Sbjct: 239 FRRLDTEKLCFVI 251

[Close]

BLAST of Cla004118 vs. NCBI nr
Match: gi|659071538|ref|XP_008460492.1| (PREDICTED: uncharacterized protein LOC103499291 [Cucumis melo])

HSP 1 Score: 253.8 bits (647), Expect = 2.7e-64
Identity = 137/243 (56.38%), Postives = 165/243 (67.90%), Query Frame = 1


Query: 1   MVKVRYTYNNKIVEKDVYETALIICDIKSKSMEPFELMELMRRLKTRFPGSTSTTSIG-- 60
           MVKV Y YNNKIVEK+VYE  L +C++K KS EPFE          +FP STS + +   
Sbjct: 1   MVKVGYIYNNKIVEKEVYEACLALCEMK-KSSEPFEE-------PNQFPSSTSISMVDDQ 60

Query: 61  ----NEQPPVIN----------------NNQNVAAVLGGAGDRILRLLPGGALDRLPPVA 120
               NEQPP++N                NN+NVAAV+    DR         L RLPP+ 
Sbjct: 61  PPVVNEQPPIVNEHAPVVNEALLNNNNNNNENVAAVVA---DR--------DLGRLPPMV 120

Query: 121 VIRNVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFD 180
           VI+N+IG CS  FVKQLTK+D+TD  GRLALHKEFVNR+LVPMFN +E L  GI V  +D
Sbjct: 121 VIQNIIGECSPPFVKQLTKTDVTDSQGRLALHKEFVNRNLVPMFNGDEILTNGISVTVYD 180

Query: 181 SEGRQYDMTFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAIIQG 222
           SEGR+YDMTF+LWTSKLYVLTKSWK+FY  N LT+  E++T+WMFRHVVNH LCFAI++G
Sbjct: 181 SEGREYDMTFRLWTSKLYVLTKSWKKFYHDNGLTRPDEFITLWMFRHVVNHKLCFAIMRG 224

[Close]

BLAST of Cla004118 vs. NCBI nr
Match: gi|700200968|gb|KGN56101.1| (hypothetical protein Csa_3G073910 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 1.1e-62
Identity = 134/238 (56.30%), Postives = 167/238 (70.17%), Query Frame = 1


Query: 1   MVKVRYTYNNKIVEKDVYETALIICDIK-SKSMEPFELMELMRRLKTRFPGSTSTTSIGN 60
           MV V YTYNNKIV +DVY+ +LI+ D+  SKS+EPFE  E + R   +   S+++TS+ N
Sbjct: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFE--EPIDRFNNQL--SSTSTSLVN 60

Query: 61  EQPPVIN------------------NNQNVAAVLGGAGDRILRLLPGGALDRLPPVAVIR 120
           EQ PV+N                  NN+NVAA +    D+           R PP+AVI+
Sbjct: 61  EQSPVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQ----------GRFPPMAVIQ 120

Query: 121 NVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIAFDSEG 180
           N+IG CS  FVKQLTK+D+TD  GRLALHKEFVN +L PMFND+EDL +GI VI +D EG
Sbjct: 121 NIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEG 180

Query: 181 RQYDMTFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAIIQGR 220
           R+YDM FKLW SKLYVLTKSWKEFYKTN+LTQ GE+++VWMFRHVV   LCFAI++G+
Sbjct: 181 REYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQ 224

[Close]

BLAST of Cla004118 vs. NCBI nr
Match: gi|700203164|gb|KGN58297.1| (hypothetical protein Csa_3G609250 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 2.7e-43
Identity = 84/126 (66.67%), Postives = 104/126 (82.54%), Query Frame = 1


Query: 97  VAVIRNVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGIDVIA 156
           +AVI+N+IG CS  FVKQL K+D+T+  GRLALHKEFV R+L+PMFN  E+L  GI V  
Sbjct: 1   MAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTV 60

Query: 157 FDSEGRQYDMTFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCFAII 216
           +DSEGR+YDM FK WTSKLYVLTKSW +FYK+NNLT+ GE+++VWMFRHVVN  LCFAI+
Sbjct: 61  YDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIM 120

Query: 217 QGRFER 223
           +G  E+
Sbjct: 121 RGDAEQ 126

[Close]

BLAST of Cla004118 vs. NCBI nr
Match: gi|764517631|ref|XP_011466877.1| (PREDICTED: putative B3 domain-containing protein At4g03170 [Fragaria vesca subsp. vesca])

HSP 1 Score: 139.0 bits (349), Expect = 9.8e-30
Identity = 62/122 (50.82%), Postives = 84/122 (68.85%), Query Frame = 1


Query: 94  LPPVAVIRNVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGID 153
           LPPV  +   IG+CS  F KQLT SD+ DG  RLA+ KE+V + L+P+ N+NEDL EGID
Sbjct: 105 LPPVPSLHQFIGICSEPFEKQLTPSDVRDGQSRLAMSKEYVQKRLMPLLNENEDLNEGID 164

Query: 154 VIAFDSEGRQYDMTFKLWTSKLYVLTKSWKEFYKTNNLTQSGEYVTVWMFRHVVNHNLCF 213
           V+ +D  G++Y M F+ W SK++VLT  WK F K + L ++  +VTVWMFR++    LCF
Sbjct: 165 VMTYDLAGKEYPMKFRTWVSKIHVLTAGWKAFRKDHKLVENQHWVTVWMFRNIATGKLCF 224

Query: 214 AI 216
            I
Sbjct: 225 VI 226

[Close]

BLAST of Cla004118 vs. NCBI nr
Match: gi|590612813|ref|XP_007022488.1| (Uncharacterized protein TCM_033025 [Theobroma cacao])

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 1


Query: 94  LPPVAVIRNVIGVCSRAFVKQLTKSDLTDGLGRLALHKEFVNRDLVPMFNDNEDLVEGID 153
           +PPVA + ++IG CSR + KQLT++DL D   RL+L+K  V +  +P+  ++ED+ +GI 
Sbjct: 80  IPPVATLAHLIGECSRPYSKQLTETDLKDNQIRLSLNKNHVGKSFIPLLKEHEDVNKGIQ 139

Query: 154 VIAFDSEGRQYDMTFKLWTSKLYVLTKS-WKEFYKTNNLTQSGEYVTVWMFRHVVNHNLC 213
           VI +D EG++Y M F  WTSK+YVLT S WK FYK + L +S + VTVWMFRH   HNLC
Sbjct: 140 VITYDPEGKEYPMKFVFWTSKMYVLTTSGWKRFYKDHALKES-DIVTVWMFRHRHTHNLC 199

Query: 214 FAI 216
           FAI
Sbjct: 200 FAI 201

The following BLAST results are available for this feature:

BLAST of Cla004118 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y4317_ARATH	1.9e-17	41.23	Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana GN=At4g0...	[more]
Y4316_ARATH	2.4e-12	33.93	Putative B3 domain-containing protein At4g03160 OS=Arabidopsis thaliana GN=At4g0...	[more]
Y1060_ARATH	5.0e-10	30.28	B3 domain-containing protein At1g20600 OS=Arabidopsis thaliana GN=At1g20600 PE=2...	[more]

BLAST of Cla004118 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7L0_CUCSA	8.0e-63	56.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073910 PE=4 SV=1	[more]
A0A0A0LC65_CUCSA	1.8e-43	66.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G609250 PE=4 SV=1	[more]
A0A061FAT0_THECC	9.8e-29	52.85	Uncharacterized protein OS=Theobroma cacao GN=TCM_033025 PE=4 SV=1	[more]
M5VSG9_PRUPE	3.3e-24	43.44	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023842mg PE=4 SV=1	[more]
B9N1E3_POPTR	5.6e-24	39.85	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s40760g PE=4 SV=1	[more]

BLAST of Cla004118 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071538\|ref\|XP_008460492.1\|	2.7e-64	56.38	PREDICTED: uncharacterized protein LOC103499291 [Cucumis melo]	[more]
gi\|700200968\|gb\|KGN56101.1\|	1.1e-62	56.30	hypothetical protein Csa_3G073910 [Cucumis sativus]	[more]
gi\|700203164\|gb\|KGN58297.1\|	2.7e-43	66.67	hypothetical protein Csa_3G609250 [Cucumis sativus]	[more]
gi\|764517631\|ref\|XP_011466877.1\|	9.8e-30	50.82	PREDICTED: putative B3 domain-containing protein At4g03170 [Fragaria vesca subsp...	[more]
gi\|590612813\|ref\|XP_007022488.1\|	1.4e-28	52.85	Uncharacterized protein TCM_033025 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003340	B3_DNA-bd
IPR015300	DNA-bd_pseudobarrel_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla004118	Cla004118.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 111..219 score: 0.
IPR015300	DNA-binding pseudobarrel domain	GENE3D	G3DSA:2.40.330.10		coord: 109..204 score: 2.3
IPR015300	DNA-binding pseudobarrel domain	unknown	SSF101936	DNA-binding pseudobarrel domain	coord: 110..206 score: 4.51
None	No IPR available	PANTHER	PTHR31541	FAMILY NOT NAMED	coord: 90..215 score: 2.7
None	No IPR available	PANTHER	PTHR31541:SF20	SUBFAMILY NOT NAMED	coord: 90..215 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla004118	Cla97C06G118790	Watermelon (97103) v2	wmwmbB406
Cla004118	Cp4.1LG18g03980	Cucurbita pepo (Zucchini)	cpewmB375
Cla004118	Carg09831	Silver-seed gourd	carwmB0127

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla004118	Cucumber (Gy14) v1	cgywmB176
Cla004118	Cucurbita maxima (Rimu)	cmawmB070
Cla004118	Cucurbita maxima (Rimu)	cmawmB137
Cla004118	Cucurbita maxima (Rimu)	cmawmB773
Cla004118	Cucurbita moschata (Rifu)	cmowmB062
Cla004118	Cucurbita moschata (Rifu)	cmowmB123
Cla004118	Cucurbita moschata (Rifu)	cmowmB168
Cla004118	Melon (DHL92) v3.5.1	mewmB254
Cla004118	Melon (DHL92) v3.5.1	mewmB290
Cla004118	Melon (DHL92) v3.5.1	mewmB433
Cla004118	Watermelon (Charleston Gray)	wcgwmB112
Cla004118	Watermelon (Charleston Gray)	wcgwmB344
Cla004118	Cucumber (Chinese Long) v2	cuwmB612
Cla004118	Cucurbita pepo (Zucchini)	cpewmB680
Cla004118	Cucurbita pepo (Zucchini)	cpewmB821
Cla004118	Bottle gourd (USVL1VR-Ls)	lsiwmB122
Cla004118	Bottle gourd (USVL1VR-Ls)	lsiwmB419
Cla004118	Cucumber (Gy14) v2	cgybwmB165
Cla004118	Melon (DHL92) v3.6.1	medwmB421
Cla004118	Silver-seed gourd	carwmB0039
Cla004118	Silver-seed gourd	carwmB0571
Cla004118	Cucumber (Chinese Long) v3	cucwmB186
Cla004118	Watermelon (97103) v2	wmwmbB393
Cla004118	Wax gourd	wgowmB155
Cla004118	Wax gourd	wgowmB680
Cla004118	Watermelon (97103) v1	wmwmB039
Cla004118	Watermelon (97103) v1	wmwmB163