Cla004112 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla004112
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Ring H2 finger protein (AHRD V1 -- D9ZHD8_HYPPE); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type
Location	Chr6 : 12991537 .. 12992805 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAAGTTTAGTAGAATCATTATGATAATTATGACTATTTCGCTTTCTCCTGTCAATGCACAAGCACCTCCTTCACCAAAAGCTGATTCTGATATTCCACAAAACTTCACCATTGTTATTGGAATCCTCTCCATTATGTTCTCCCTGGCCTTCATTCTTGTTCTTTATGCAAAATTCTGTCACCAGACTTCCCATCTTCGTGGCGAACCGCAAGCTCATCTCGGGCTTGGACTTCTCAGATCAGACTCGAGATTTTCTGGGATTGATCAAAAGGTGATTGATGCACTTCCTTTCTTTAAATTCTCATCACTCAAAGGATCAAGAGAAGGGCTGGAATGTGCTGTTTGCTTATCCAAATTTGAGGATATTGAAGTTCTTCGGTTGCTTCCGAAGTGCAAGCATGCATTTCACATTGGCTGTATTGATCATTGGCTCGAAAAGCACTCAAGCTGTCCGCTTTGTCGGTGTAGGATCAGCGTCGAGGACGTTGCATTCTTTACCTATTCCAACAGTATGAGACTAATGAGGAACAACAGCCAGCCAGAGCTGCCACAAGATTCACAAATGGAGCTCTTTGTGCAGAGAGAGAAAGATCATCATAACTCTTCAAGGTTCAACACTGGAACCAGCTTCAGAAAAATAGGAAAGGGTAACAAGGAGAAAGAAGTCCTGATCGAAAATGAAGCCGGTGAATGCGAAAGTGAGGAGCGGGTGCTCTTTCACAAGCATAAACATAAGATTCTTGTATCTGACTTTGTTTTCATGAACAGATGGAGCAACTTGAGTTCTTCTGACCTGATGTTCTTGAACACAGAAATGCTTGGAGCCATGTCCAGCAATAGATTCTCTTCTTTGGATTCAGAAAGTGTTTGCCGATCGGCAACAAGAGAATCTGAGGGAAAAAGGACTTCACAAATTAAAGAAGAGATGGAAATGAAGAGATCATTTGAGAGGAGGATAAGCATAGCTGAGAAAAATAGTTTAGTTTCAATCTCAGGTATTCCCTCAATATGTGATTTTAATGCAAGTACATCAAGGACAACAAATCTTAATGAAAGAAGATCTGTGTCAGACACCACTGCTTTCTCAAGATTTGGTCATTTCAATGAGAATGCAATAAGAGACAGTTCTATGATTGAAGCTGATGCAAAAAATTACAGAGTTAGGCAGATATGGTTGCCAATAGCCAAAAGAACAGTACAATGGTTCGCCAATAGGGAACAAAGGTCTAAACTGTCGAAGTACACACAGCAGCCAGATGTATAG

mRNA sequence

ATGAGTAAGTTTAGTAGAATCATTATGATAATTATGACTATTTCGCTTTCTCCTGTCAATGCACAAGCACCTCCTTCACCAAAAGCTGATTCTGATATTCCACAAAACTTCACCATTGTTATTGGAATCCTCTCCATTATGTTCTCCCTGGCCTTCATTCTTGTTCTTTATGCAAAATTCTGTCACCAGACTTCCCATCTTCGTGGCGAACCGCAAGCTCATCTCGGGCTTGGACTTCTCAGATCAGACTCGAGATTTTCTGGGATTGATCAAAAGGTGATTGATGCACTTCCTTTCTTTAAATTCTCATCACTCAAAGGATCAAGAGAAGGGCTGGAATGTGCTGTTTGCTTATCCAAATTTGAGGATATTGAAGTTCTTCGGTTGCTTCCGAAGTGCAAGCATGCATTTCACATTGGCTGTATTGATCATTGGCTCGAAAAGCACTCAAGCTGTCCGCTTTGTCGGTGTAGGATCAGCGTCGAGGACGTTGCATTCTTTACCTATTCCAACAGTATGAGACTAATGAGGAACAACAGCCAGCCAGAGCTGCCACAAGATTCACAAATGGAGCTCTTTGTGCAGAGAGAGAAAGATCATCATAACTCTTCAAGGTTCAACACTGGAACCAGCTTCAGAAAAATAGGAAAGGGTAACAAGGAGAAAGAAGTCCTGATCGAAAATGAAGCCGGTGAATGCGAAAGTGAGGAGCGGGTGCTCTTTCACAAGCATAAACATAAGATTCTTGTATCTGACTTTGTTTTCATGAACAGATGGAGCAACTTGAGTTCTTCTGACCTGATGTTCTTGAACACAGAAATGCTTGGAGCCATGTCCAGCAATAGATTCTCTTCTTTGGATTCAGAAAGTGTTTGCCGATCGGCAACAAGAGAATCTGAGGGAAAAAGGACTTCACAAATTAAAGAAGAGATGGAAATGAAGAGATCATTTGAGAGGAGGATAAGCATAGCTGAGAAAAATAGTTTAGTTTCAATCTCAGGTATTCCCTCAATATGTGATTTTAATGCAAGTACATCAAGGACAACAAATCTTAATGAAAGAAGATCTGTGTCAGACACCACTGCTTTCTCAAGATTTGGTCATTTCAATGAGAATGCAATAAGAGACAGTTCTATGATTGAAGCTGATGCAAAAAATTACAGAGTTAGGCAGATATGGTTGCCAATAGCCAAAAGAACAGTACAATGGTTCGCCAATAGGGAACAAAGGTCTAAACTGTCGAAGTACACACAGCAGCCAGATGTATAG

Coding sequence (CDS)

ATGAGTAAGTTTAGTAGAATCATTATGATAATTATGACTATTTCGCTTTCTCCTGTCAATGCACAAGCACCTCCTTCACCAAAAGCTGATTCTGATATTCCACAAAACTTCACCATTGTTATTGGAATCCTCTCCATTATGTTCTCCCTGGCCTTCATTCTTGTTCTTTATGCAAAATTCTGTCACCAGACTTCCCATCTTCGTGGCGAACCGCAAGCTCATCTCGGGCTTGGACTTCTCAGATCAGACTCGAGATTTTCTGGGATTGATCAAAAGGTGATTGATGCACTTCCTTTCTTTAAATTCTCATCACTCAAAGGATCAAGAGAAGGGCTGGAATGTGCTGTTTGCTTATCCAAATTTGAGGATATTGAAGTTCTTCGGTTGCTTCCGAAGTGCAAGCATGCATTTCACATTGGCTGTATTGATCATTGGCTCGAAAAGCACTCAAGCTGTCCGCTTTGTCGGTGTAGGATCAGCGTCGAGGACGTTGCATTCTTTACCTATTCCAACAGTATGAGACTAATGAGGAACAACAGCCAGCCAGAGCTGCCACAAGATTCACAAATGGAGCTCTTTGTGCAGAGAGAGAAAGATCATCATAACTCTTCAAGGTTCAACACTGGAACCAGCTTCAGAAAAATAGGAAAGGGTAACAAGGAGAAAGAAGTCCTGATCGAAAATGAAGCCGGTGAATGCGAAAGTGAGGAGCGGGTGCTCTTTCACAAGCATAAACATAAGATTCTTGTATCTGACTTTGTTTTCATGAACAGATGGAGCAACTTGAGTTCTTCTGACCTGATGTTCTTGAACACAGAAATGCTTGGAGCCATGTCCAGCAATAGATTCTCTTCTTTGGATTCAGAAAGTGTTTGCCGATCGGCAACAAGAGAATCTGAGGGAAAAAGGACTTCACAAATTAAAGAAGAGATGGAAATGAAGAGATCATTTGAGAGGAGGATAAGCATAGCTGAGAAAAATAGTTTAGTTTCAATCTCAGGTATTCCCTCAATATGTGATTTTAATGCAAGTACATCAAGGACAACAAATCTTAATGAAAGAAGATCTGTGTCAGACACCACTGCTTTCTCAAGATTTGGTCATTTCAATGAGAATGCAATAAGAGACAGTTCTATGATTGAAGCTGATGCAAAAAATTACAGAGTTAGGCAGATATGGTTGCCAATAGCCAAAAGAACAGTACAATGGTTCGCCAATAGGGAACAAAGGTCTAAACTGTCGAAGTACACACAGCAGCCAGATGTATAG

Protein sequence

MSKFSRIIMIIMTISLSPVNAQAPPSPKADSDIPQNFTIVIGILSIMFSLAFILVLYAKFCHQTSHLRGEPQAHLGLGLLRSDSRFSGIDQKVIDALPFFKFSSLKGSREGLECAVCLSKFEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPLCRCRISVEDVAFFTYSNSMRLMRNNSQPELPQDSQMELFVQREKDHHNSSRFNTGTSFRKIGKGNKEKEVLIENEAGECESEERVLFHKHKHKILVSDFVFMNRWSNLSSSDLMFLNTEMLGAMSSNRFSSLDSESVCRSATRESEGKRTSQIKEEMEMKRSFERRISIAEKNSLVSISGIPSICDFNASTSRTTNLNERRSVSDTTAFSRFGHFNENAIRDSSMIEADAKNYRVRQIWLPIAKRTVQWFANREQRSKLSKYTQQPDV

Homology

[Close]

BLAST of Cla004112 vs. Swiss-Prot
Match: ATL42_ARATH (E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42 PE=1 SV=2)

HSP 1 Score: 322.0 bits (824), Expect = 9.7e-87
Identity = 197/448 (43.97%), Postives = 279/448 (62.28%), Query Frame = 1


Query: 6   RIIMIIMTISLSPVNAQAPPSPKADSDIPQNF----TIVIGILSIMFSLAFILVLYAKFC 65
           +I    + +  S  +AQ PP P  + D+  NF     +V G+L+IMF+L F+L++YAK C
Sbjct: 3   QIFFFFLPLLHSYASAQTPP-PFRNGDLVANFEPSLAVVTGVLAIMFALTFVLLVYAKCC 62

Query: 66  H------QTSHLRGEPQAHLGLGLLRSDS---RFSGIDQKVIDALPFFKFSSLKGSREGL 125
           H           R + +   G+   RS +   RFSG+D+  I++LP F+FS+LKGS++GL
Sbjct: 63  HIDLRSGSGDRRRHDRRLRQGIFFNRSTASSDRFSGLDKTAIESLPLFRFSALKGSKQGL 122

Query: 126 ECAVCLSKFEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPLCRCRISV-EDVAFFTYSN 185
           +C+VCLSKFE +E+LRLLPKC+HAFHIGCID WLE+H++CPLCR R+S+ ED +  T  N
Sbjct: 123 DCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSVLTNGN 182

Query: 186 SMRLMRNNSQPELPQDSQMELFVQREKDHH--------NSSRFNTGTSFRKIGK-GNKEK 245
           S R +   +Q E+ +DS +EL+++RE++           SSRF+ G SFRKI K GNKEK
Sbjct: 183 SFRFL---NQSEIREDSSLELYIEREEEEERIHREELSGSSRFSIGESFRKILKLGNKEK 242

Query: 246 EVLIENEAGECESEERVLFHKHKHKILVSDFVFMNRWSNLSSSDLMFLNTEMLGAMSSNR 305
            +L E+     + +E+ L HK  H+I+VSD VF NRWSN+SSSDLMFLN+EM+ ++SS R
Sbjct: 243 TLLDEHVN---DKDEKKLMHKFNHRIVVSDVVFKNRWSNVSSSDLMFLNSEMVNSISSER 302

Query: 306 FSSLDSESVCRSATRESEGKRTSQIKEEMEMKRSFERRISIAEKNSLVSISGIPSICDFN 365
           FSSLD   V R    +  G    +IKEEME KR  E +++     S+ ++    S    +
Sbjct: 303 FSSLD--HVKRGDEEDQIG--ILRIKEEMEAKRMLENKLT-----SMTTM--FSSENGDS 362

Query: 366 ASTSRTTNLNE-RRSVSDTTAFSRF-----GHFNENAIRDSSMIE--ADAKNYRVRQIWL 423
            S SR+  +   RRSVSD TA  R      G  + +A   +S ++   +    R R++WL
Sbjct: 363 GSKSRSVMIEPGRRSVSDITAVPRLSISIHGDCSGSAAETASALQNGGNETEERRRRLWL 422

[Close]

BLAST of Cla004112 vs. Swiss-Prot
Match: ATL12_ARATH (Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana GN=ATL12 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 9.7e-79
Identity = 186/437 (42.56%), Postives = 258/437 (59.04%), Query Frame = 1


Query: 8   IMIIMTISLSPVNAQAPPSPK--ADSDI-PQNFTIVIGILSIMFSLAFILVLYAKFCHQT 67
           I+    I L  V+AQ+PP P   A SD+   +  I+ G+ SI+F+L F+L++YAK  H  
Sbjct: 9   ILFFFIIFLDYVSAQSPPPPNLYATSDLFKPSLAIITGVFSIVFTLTFVLLVYAKCFH-- 68

Query: 68  SHLRGEPQA--------HLGLGLLRSDSRFSGIDQKVIDALPFFKFSSLKGSREGLECAV 127
           + LR E  +         L  GL    SRFSG+D+K I++LPFF+FS+LKG ++GLEC+V
Sbjct: 69  NDLRSETDSDGERIRHDRLWQGLFNRSSRFSGLDKKAIESLPFFRFSALKGLKQGLECSV 128

Query: 128 CLSKFEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPLCRCRISVEDVAFFTYSNSMRLM 187
           CLSKFED+E+LRLLPKC+HAFHIGCID WLE+H++CPLCR R+++ED      ++S  L 
Sbjct: 129 CLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDLSVLGNSSTSLR 188

Query: 188 RNNSQPELPQDSQMELFVQREK-DHHNSSRFNTGTSFRKIGKGNKEKEVLIENEAGECES 247
             N      +DS++E++++RE+  +  SSRF   +SFRKI K    K +L+E E  E   
Sbjct: 189 ILNQSETREEDSRLEIYIEREEGTNDGSSRF---SSFRKILK----KSLLLEREGNE-NI 248

Query: 248 EERVLFHKHKHKILVSDFVFMNRWSNLSSSDLMFLNTEMLGAMSSNRFSSLDSESVCRSA 307
           +E+ L HK  H+I+VSD VF NRWSN++SSDL FL +EML ++SS+RFSS+D   V R  
Sbjct: 249 DEKKLMHKFNHRIVVSDAVFKNRWSNITSSDLTFLTSEMLNSVSSDRFSSVD--RVHRGN 308

Query: 308 TRESEGKRTSQIKEEMEMKRSFERRISIAEKNSLVSISGIPSICDFNASTSRTTNLNERR 367
            R+         KE+MEMK     R+ I  K+S                         RR
Sbjct: 309 LRD---------KEDMEMK-----RMLIKHKDS------------------------SRR 368

Query: 368 SVSDTTAFSRFGHFNENAIRDS--SMIEADAKNYRV--------RQIWLPIAKRTVQWFA 423
           +VS+ T  SR     E A+  S      + ++NY V        R++WLPIA+RT QWF 
Sbjct: 369 TVSEITTVSR-----EKAVGGSYRGSTASTSQNYAVTATTEERRRRLWLPIARRTAQWFV 390

[Close]

BLAST of Cla004112 vs. Swiss-Prot
Match: ATL43_ARATH (RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 8.0e-33
Identity = 90/239 (37.66%), Postives = 124/239 (51.88%), Query Frame = 1


Query: 24  PPSPKADSDIPQNFTIVIGILSIMFSLAFILVLYAKFCHQT--SHLRGEPQ--------- 83
           PP     S +     +VI +L+  FSL F+L+LY K C +   S     PQ         
Sbjct: 45  PPRHNFTSSLMPGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGG 104

Query: 84  AHLGLGLLRSDSRFSGIDQKVIDALPFFKFSSLKGSREGLECAVCLSKFEDIEVLRLLPK 143
            +   G +    + SGID+ VI++LP F+F +L G ++GLECAVCL++FE  EVLRLLPK
Sbjct: 105 GYYNGGGVVGGRKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPK 164

Query: 144 CKHAFHIGCIDHWLEKHSSCPLCRCRISVEDVAFFTYSNSMRLMR-----NNSQPELPQD 203
           CKHAFH+ C+D WL+ HS+CPLCR R+  ED+      NS   ++     +NS    P  
Sbjct: 165 CKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKDESNSVNNNPPG 224

Query: 204 SQMELFVQREKDHHNS-----SRFN---TGTSFRKIGKGNKEK--EVLIENEAGECESE 237
               + V R    H+S     SR N   T +S++      +      L  N+AGE +SE
Sbjct: 225 LTRFIPVSRISGRHSSAGERASRLNEIRTSSSYKSNPMSFRRSLDSSLKVNDAGEEKSE 283

[Close]

BLAST of Cla004112 vs. Swiss-Prot
Match: ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.9e-22
Identity = 57/142 (40.14%), Postives = 78/142 (54.93%), Query Frame = 1


Query: 26  SPKADSDIPQNFTIVIGILSIMFSLAFILVLYAKFCH---QTSHLRGEPQAHLGLGLLRS 85
           S  + S        +IGIL+    L     L +K+CH   QTS        H G G   S
Sbjct: 47  SSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSS 106

Query: 86  DSRFS----GIDQKVIDALPFFKFSSLKGSREGLECAVCLSKFEDIEVLRLLPKCKHAFH 145
             R S    G+++ +I ++  +K+ S  G  +G +C+VCLS+FE+ E LRLLPKC HAFH
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFH 166

Query: 146 IGCIDHWLEKHSSCPLCRCRIS 161
           + CID WL+ HS+CPLCR  ++
Sbjct: 167 LPCIDTWLKSHSNCPLCRAFVT 188

[Close]

BLAST of Cla004112 vs. Swiss-Prot
Match: ATL32_ARATH (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2 SV=3)

HSP 1 Score: 105.1 bits (261), Expect = 1.9e-21
Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 1


Query: 7   IIMIIMTISLSPVNAQA--PPSPKADSDIPQNFTIVIGILSIMFSLAFILVLYAKFCHQT 66
           II+ +  I  S  NAQ+  P  P   +    + T V  +L  +F L  +L +Y + C   
Sbjct: 14  IILHVAIIIQSKANAQSFSPSPPDLQTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHC--- 73

Query: 67  SHLRGEPQAHLGLGLLRSD---SRFSGIDQKVIDALPFFKFSSLKGSREG---LECAVCL 126
              R  P +       R++   SR  G+D  V+++ P F +SS+K S+ G   LECA+CL
Sbjct: 74  --ARSNPDSSTRYFRNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICL 133

Query: 127 SKFEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPLCRCRISVE 163
           ++ ED E +RLLP C H FHI CID WL  H++CP+CR  ++ +
Sbjct: 134 NELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAK 172

[Close]

BLAST of Cla004112 vs. TrEMBL
Match: A0A061GMH2_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_037822 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 6.7e-119
Identity = 235/428 (54.91%), Postives = 306/428 (71.50%), Query Frame = 1


Query: 6   RIIMIIMTISLSPVNAQAPPSPK--ADSDIPQNF----TIVIGILSIMFSLAFILVLYAK 65
           R+I +++   L  V+AQ+P S       D   NF     +VIG+L +MFSL   L++YAK
Sbjct: 5   RVICLVLFFLLFNVDAQSPSSESDATSGDAVSNFRPSLAVVIGVLCVMFSLTLFLLVYAK 64

Query: 66  FCHQTSHLRGEPQAHLGLGLLRSDSRFSGIDQKVIDALPFFKFSSLKGSREGLECAVCLS 125
           FCH+ + + G+   H G+ L R+ S+FSGID+KVI++LPFFKFSSLKGS++GLECAVCLS
Sbjct: 65  FCHRGATVHGD--RHPGI-LHRTRSQFSGIDKKVIESLPFFKFSSLKGSKQGLECAVCLS 124

Query: 126 KFEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPLCRCRISVEDVAFFTYSNSMRLMRNN 185
           KFEDIE+LRLLPKCKHAFHIGCID WLE+HSSCPLCR +I+ ED   FTYSNSMR + N 
Sbjct: 125 KFEDIEILRLLPKCKHAFHIGCIDRWLERHSSCPLCRQKINTEDPTIFTYSNSMRFLWN- 184

Query: 186 SQPELPQDSQMELFVQREKDHHNSSRFNTGTSFRKIGKGNKEKEVLIENEAGECESEERV 245
            Q EL +DS MEL++QRE++ H SSRF+ G+S RKI KGN E EVLI+ EA + + + RV
Sbjct: 185 -QSELREDSNMELYIQREQESHGSSRFSIGSSSRKIEKGNIENEVLIQEEAADEDDDGRV 244

Query: 246 LFHKHKHKILVSDFVFMNRWSNLSSSDLMFLNTEMLGAMSSNRFSSLDSESVCRSA-TRE 305
            FHK KHKI+VSD V  NRWS++SSSDLMFLN+EML  MSSNRFSSL++    +S  TR 
Sbjct: 245 -FHKFKHKIIVSDVVLKNRWSSVSSSDLMFLNSEMLNEMSSNRFSSLETNDHGQSTITRP 304

Query: 306 SEGKRTSQIKEEMEMKRSFERRISIAEKNSLVSISGIPSICDFNASTSRTT---NLNERR 365
            E K+  +IKEE+E+KR FE ++S   KN+ VS   +PS  +F+A++S T+   N  E+R
Sbjct: 305 IENKQIMKIKEELEIKRLFESKVSSINKNNPVSAPALPSTSNFSATSSHTSMIVNQAEKR 364

Query: 366 SVSDTTAFSRFGHFN-ENAIRDSSMIEADAKNYRVRQIWLPIAKRTVQWFANREQRSKLS 423
           S+S+ TA SRF   +  N    S + E + K  R+R++WLPIA++TVQWFANRE   +  
Sbjct: 365 SMSEITALSRFRDVSPRNRTSQSLLSETNTKEERIRRLWLPIARKTVQWFANRESSQQSQ 424

[Close]

BLAST of Cla004112 vs. TrEMBL
Match: M5W8V8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019638mg PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 2.4e-116
Identity = 233/425 (54.82%), Postives = 300/425 (70.59%), Query Frame = 1


Query: 5   SRIIMIIMTISLSPVNAQAPPSPKADSDIPQNF----TIVIGILSIMFSLAFILVLYAKF 64
           S +I++++   +  V AQ   S    SD   NF     +VIGIL+IMF+L F+L++YAKF
Sbjct: 4   SSLIVLLLNCVVFHVEAQISGS-NFPSDEQSNFEPSVAVVIGILAIMFALTFVLLVYAKF 63

Query: 65  CHQTSHLRGEPQAHLGLGLLRSDSRFSGIDQKVIDALPFFKFSSLKGSREGLECAVCLSK 124
           CH+ +++ G    H    ++ + SRFSGID+ VI+ALP+F+FSSL+GS+EGLEC+VCLSK
Sbjct: 64  CHRRAYVGGNN--HRRTEVISTSSRFSGIDKTVIEALPYFRFSSLRGSKEGLECSVCLSK 123

Query: 125 FEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPLCRCRISVEDVAFFTYSNSMRLMRNNS 184
           FEDIEVLRLLPKCKHAFHI CIDHWLEKHSSCPLCR RIS ED+ F TYS+SMR+   NS
Sbjct: 124 FEDIEVLRLLPKCKHAFHISCIDHWLEKHSSCPLCRHRISSEDLTFITYSDSMRVFW-NS 183

Query: 185 QPELPQDSQMELFVQREKDHHNSSRFNTGTSFRKIGKG-NKEKEVLIENEAGECESEERV 244
           Q E  QDS +ELFVQRE+D   SSRF+ G+SFRK  K  +KE+E+LI  E  +   E++ 
Sbjct: 184 QSEHRQDSNIELFVQREEDRRGSSRFSIGSSFRKTEKAVDKEEELLILEEGADMSKEDQK 243

Query: 245 LFHKHKHKILVSDFVFMNRWSNLSSSDLMFLNTEMLGAMSSNRFSSLDSESVCRSATRES 304
           + HKHKHKI+VSD  F NRWSN+SSSDLMFLN+EML  MSSNRFSS        +AT   
Sbjct: 244 ILHKHKHKIVVSDLEFKNRWSNVSSSDLMFLNSEMLNTMSSNRFSSARLNHEPATATGNE 303

Query: 305 EGKRTSQIKEEMEMKRSFERRISIAEKNSLVSISGIPSICDF---NASTSRTTNLNERRS 364
           E     +I+EEMEMKR FE ++S   KN+  S    PS  D+   +A  SR+ N  E+RS
Sbjct: 304 E---IMKIREEMEMKRLFENKVSTMNKNASASSPTFPSTSDYIATSAHASRSMNQGEKRS 363

Query: 365 VSDTTAFSRFGHFN-ENAIRDSSMIEADAKNYRVRQIWLPIAKRTVQWFANREQRSKLSK 421
           +S+ TA SRFG+   +N  ++ S++E + K  R+R++WLPIA+RTVQWFANRE+R     
Sbjct: 364 MSEITALSRFGNLGFKNRNKEPSLLENNVKEERMRRLWLPIARRTVQWFANREKR----- 415

[Close]

BLAST of Cla004112 vs. TrEMBL
Match: F6HH04_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g03420 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 3.8e-114
Identity = 229/433 (52.89%), Postives = 308/433 (71.13%), Query Frame = 1


Query: 1   MSKFSRIIMIIMTISLSPVNAQAPP------SPKADSDIPQNFTIVIGILSIMFSLAFIL 60
           M+++S II  +++  L  V +QA P      S  A +    +  +VIGIL++MF L FIL
Sbjct: 47  MNRWSSIIWFLLSGLLFNVESQAAPGQENFSSQDAVTAFKPSLAVVIGILAVMFLLTFIL 106

Query: 61  VLYAKFCHQTSHLRGEPQAHLGLGLLRSDSRFSGIDQKVIDALPFFKFSSLKGSREGLEC 120
           ++YAK CH+ S+   E Q     GL RS+SRFSGID+ VI++LPFF+F SLKGS+EGLEC
Sbjct: 107 LVYAKLCHRASNSDRENQQ----GLTRSESRFSGIDKTVIESLPFFRFCSLKGSKEGLEC 166

Query: 121 AVCLSKFEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPLCRCRISVEDVAFFTYSNSMR 180
           AVCLSKFEDIE+LRLLPKCKHAFHI C+D WLEKHSSCPLCR ++S ED+A  TYSNS+R
Sbjct: 167 AVCLSKFEDIEILRLLPKCKHAFHIDCVDQWLEKHSSCPLCRHKVSAEDLAILTYSNSLR 226

Query: 181 LMRNNSQPELPQDSQMELFVQREKDHHNSSRFNTGTSFRKIGKGNKEKE-VLIENEAGEC 240
            + N  Q EL ++S +ELFVQRE+DHH SSRF+ G+SFRK+ KG KE+E VLI+ E  E 
Sbjct: 227 FLWN--QSELRENSNLELFVQREEDHHGSSRFSIGSSFRKVEKGVKEEESVLIQEE--ED 286

Query: 241 ESEERVLFHKHKHKILVSDFVFMNRWSNLSSSDLMFLNTEMLGAMSSNRFSSLDSESVCR 300
           ++++  + HK  HKI+VSD V  NRWS++SSSDLM+LN+E++ AMSS+RF+SLDS +   
Sbjct: 287 DNDDEKILHKINHKIIVSDVVLKNRWSSVSSSDLMYLNSELVHAMSSDRFASLDSNN--S 346

Query: 301 SATRESEGKRTSQIKEEMEMKRSFERRISIAEKNSLVSISGIPSICDFNAST---SRTTN 360
           +  R  E     +IKEE+E KR FE R+S    ++ VS SG+PS     A++   SR  +
Sbjct: 347 AMGRPIEDWEVMKIKEEIERKRIFESRVSRINHSNPVSSSGLPSTSKTEANSGHASRFLH 406

Query: 361 LNERRSVSDTTAFSRFGHFN-ENAIRDSSMIEADAKNYRVRQIWLPIAKRTVQWFANREQ 420
             E+RS+S+ TA SR+  F+ +N IR+SS+ + + K  R+R++WLPIA+RTV+WFANRE 
Sbjct: 407 PTEKRSMSEITACSRYADFSTKNRIRESSLAQNNIKEERMRRLWLPIARRTVEWFANREG 466

Query: 421 RSKLSKYTQQPDV 423
             +     Q PDV
Sbjct: 467 SQQSQNTKQAPDV 469

[Close]

BLAST of Cla004112 vs. TrEMBL
Match: M5W654_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026744mg PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 4.2e-113
Identity = 219/377 (58.09%), Postives = 277/377 (73.47%), Query Frame = 1


Query: 39  IVIGILSIMFSLAFILVLYAKFCHQTSHLRGEPQAHLGLGLLRSDSRFSGIDQKVIDALP 98
           +VIG+LSIMF+L F L++YAK CH+ + + G    H G  L+ + SRFSGID+ VI+ALP
Sbjct: 28  MVIGVLSIMFALTFALLVYAKHCHREAPVYGNN--HTGTRLISTSSRFSGIDKTVIEALP 87

Query: 99  FFKFSSLKGSREGLECAVCLSKFEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPLCRCR 158
           FF+FSSLKGS+EGLEC+VCLSKFEDIEVLRLLPKCKHAFHI CIDHWLEKHSSCPLCR +
Sbjct: 88  FFRFSSLKGSKEGLECSVCLSKFEDIEVLRLLPKCKHAFHISCIDHWLEKHSSCPLCRHK 147

Query: 159 ISVEDVAFFTYSNSMRLMRNNSQPELPQDSQMELFVQREKDHHNSSRFNTGTSFRKIGK- 218
           +S ED+ F TYSNSMR + NN Q E  QDS +ELFV+RE++H  SSRF+ G SFRK  K 
Sbjct: 148 VSSEDLTFITYSNSMRFLWNN-QSEHRQDSNIELFVRREEEHRGSSRFSIGGSFRKSEKV 207

Query: 219 GNKEKEVLIENEAGECESEERVLFHKHKHKILVSDFVFMNRWSNLSSSDLMFLNTEMLGA 278
            +KE+E+LI+ EA +   E + + HKHKHKI+VSDF F NRWSN+SSSDLMFLN+EML  
Sbjct: 208 VDKEEEMLIQEEAADETEEGQKILHKHKHKIVVSDFEFKNRWSNVSSSDLMFLNSEMLNT 267

Query: 279 MSSNRFSSLDSESVCRSATRESEGKRTSQIKEEMEMKRSFERRISIAEKNSLVSISGIPS 338
           MSSNRFSS    +   S    +  +   +I+EEM MKR FE ++S   KNS  S   +PS
Sbjct: 268 MSSNRFSSAHFINEQFSTAETTGNEDIMKIREEMGMKRLFENKVSTMNKNSTASNPILPS 327

Query: 339 ICD---FNASTSRTTNLNERRSVSDTTAFSRFGHFN-ENAIRDSSMIEADAKNYRVRQIW 398
             D    +A  S + N  E+RS+S+ TA SRFG+   +N  R+ S++E + K  R R++W
Sbjct: 328 TSDGIATSADASSSMNPGEKRSMSEITALSRFGNLGFKNRTREPSLLENNLKEERRRRLW 387

Query: 399 LPIAKRTVQWFANREQR 411
           LPIA+RTV+WFANRE+R
Sbjct: 388 LPIARRTVRWFANREKR 401

[Close]

BLAST of Cla004112 vs. TrEMBL
Match: B9ILR6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s09200g PE=4 SV=2)

HSP 1 Score: 413.3 bits (1061), Expect = 3.5e-112
Identity = 226/405 (55.80%), Postives = 290/405 (71.60%), Query Frame = 1


Query: 25  PSPKADSDIPQNFTIVIGILSIMFSLAFILVLYAKFCHQTSHLRGEPQAHLGLGLLRSDS 84
           PS  A S+   +  +VIGIL ++FSL FIL++YAKFCH+   + G  +   G  L RS S
Sbjct: 30  PSQDAVSNFRPSLAVVIGILFLIFSLTFILLIYAKFCHRGGLVHGGSEN--GPALTRSAS 89

Query: 85  RFSGIDQKVIDALPFFKFSSLKGSREGLECAVCLSKFEDIEVLRLLPKCKHAFHIGCIDH 144
           RFSGID+ VI++LPFF+F+SLKGSREGLECAVCLSKFEDIE+LRLLPKCKHAFHI C+D 
Sbjct: 90  RFSGIDKTVIESLPFFRFTSLKGSREGLECAVCLSKFEDIEILRLLPKCKHAFHINCVDQ 149

Query: 145 WLEKHSSCPLCRCRISVEDVAFFTYSNSMRLMRNNSQPELPQDSQMELFVQREKDHHNSS 204
           WLEKHSSCPLCR +++ ED   FTYSNSMR + N  Q EL +DS +ELFVQRE++   SS
Sbjct: 150 WLEKHSSCPLCRRKVNPEDPTIFTYSNSMRYLGN--QSELREDSNVELFVQREENRQGSS 209

Query: 205 RFNTGTSFRKIGKGNKEKEVLIENEAGECESEERVLFHKHKHKILVSDFVFMNRWSNLSS 264
           RF+ G+SFR  GK +KE+E+ I+ E    ++++++ F+K KHKI+VSD V  NRWS+ SS
Sbjct: 210 RFSVGSSFRTSGKVSKEEELWIKEEVEGSDNDQKI-FNKFKHKIIVSDVVLKNRWSSASS 269

Query: 265 SDLMFLNTEMLGAMSSNRFSS--LDSESVCRSATRESEGKRTSQIKEEMEMKRSFERRIS 324
           SDLMFLN+EML  MSSNRF +  LD ES   +A R  E ++  +IKEE+EMKR  E ++S
Sbjct: 270 SDLMFLNSEMLHDMSSNRFHTPDLDEES---TANRGIEDEKFLKIKEEIEMKRLLESKVS 329

Query: 325 IAEKNSLVSISGIPSICD---FNASTSRTTNLNERRSVSDTTAFSRFGHF------NENA 384
              KNS +SI G PS  D    +  TSR  N  +RRSVS+ TAFSRF  F      N  +
Sbjct: 330 PVNKNSQISIQGQPSTSDSKGISGQTSRIINSTDRRSVSEITAFSRFRSFGLKNTINRVS 389

Query: 385 IRDSSMIEADAKNYRVRQIWLPIAKRTVQWFANREQRSKLSKYTQ 419
            +D S ++AD    R RQ+WLPIA+RTVQWFANRE+R + ++ T+
Sbjct: 390 SQDGSNVQAD----RQRQLWLPIARRTVQWFANRERRIQQTENTR 422

[Close]

BLAST of Cla004112 vs. NCBI nr
Match: gi|1009160610|ref|XP_015898444.1| (PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Ziziphus jujuba])

HSP 1 Score: 444.1 bits (1141), Expect = 2.7e-121
Identity = 235/423 (55.56%), Postives = 302/423 (71.39%), Query Frame = 1


Query: 8   IMIIMTISLSPVNAQAPPS---PKADSDIPQNFTIVIGILSIMFSLAFILVLYAKFCHQT 67
           I++++   +S   AQA PS       SD+  +  IVIGIL +MF L F+L++YAK CH++
Sbjct: 7   IILLIIFMISHAEAQAVPSNYEANIPSDLKPSIAIVIGILCVMFVLTFVLLVYAKLCHRS 66

Query: 68  SHLRGEPQAHLGLGLLRSDSRFSGIDQKVIDALPFFKFSSLKGSREGLECAVCLSKFEDI 127
             +    Q   GL  +   SRFSGID+ VI++LPFF+FSSLKGS+EGLECAVCLSKFED 
Sbjct: 67  ESVLENLQNQQGL--ISRSSRFSGIDKTVIESLPFFRFSSLKGSKEGLECAVCLSKFEDF 126

Query: 128 EVLRLLPKCKHAFHIGCIDHWLEKHSSCPLCRCRISVEDVAFFTYSNSMRLMRNNSQPEL 187
           EVLRLLPKCKHAFHI CIDHWLEKHSSCPLCR R+S ED+    YSNSMRL+ NN Q EL
Sbjct: 127 EVLRLLPKCKHAFHIDCIDHWLEKHSSCPLCRHRVSSEDLTIIAYSNSMRLLWNN-QSEL 186

Query: 188 PQDSQMELFVQREKDHHNSSRFNTGTSFRKIGKGNKEKEVLIENEAGECESEERVLFHKH 247
            +DS +ELFVQRE+ H  SSRF+ G+SFRK+ KG+KE+E+LI+ E  E E +++  FHKH
Sbjct: 187 REDSNIELFVQREEGHRGSSRFSIGSSFRKMEKGDKEEELLIQEEVDENEEDQKA-FHKH 246

Query: 248 KHKILVSDFVFMNRWSNLSSSDLMFLNTEMLGAMSSNRFSSLDSESVCRSATRESEGKRT 307
            HKI+ SDF+F NRWS++SSSDL+FLN+EM+  +SSNRF ++DS +      R SE +  
Sbjct: 247 NHKIIASDFMFKNRWSSVSSSDLLFLNSEMISHISSNRFPTMDSNNELFLTGRGSENEEI 306

Query: 308 SQIKEEMEMKRSFERRISIAEKNS---LVSISGIPSICDFNASTSRTTNLNERRSVSDTT 367
            +IKEEMEMKRSFE ++S   KNS    + +   PS    ++ TSR  N  E+RS+S+ T
Sbjct: 307 MKIKEEMEMKRSFESKVSTINKNSGSLSIQVLDPPSDLASSSKTSRAVNQGEKRSMSEIT 366

Query: 368 AFSRFGHFN-ENAIRDSSMIEADAKNYRVRQIWLPIAKRTVQWFANREQRSKLS-KYTQQ 423
           A SR+G+F+  N I +S       K   +R++WLPIA+RTVQWFANRE+RS LS K TQQ
Sbjct: 367 ALSRYGNFDMSNRIGESHSSRNSVKEESIRRLWLPIARRTVQWFANREKRSHLSQKTTQQ 425

[Close]

BLAST of Cla004112 vs. NCBI nr
Match: gi|590576887|ref|XP_007013082.1| (RING/U-box superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 435.6 bits (1119), Expect = 9.6e-119
Identity = 235/428 (54.91%), Postives = 306/428 (71.50%), Query Frame = 1


Query: 6   RIIMIIMTISLSPVNAQAPPSPK--ADSDIPQNF----TIVIGILSIMFSLAFILVLYAK 65
           R+I +++   L  V+AQ+P S       D   NF     +VIG+L +MFSL   L++YAK
Sbjct: 5   RVICLVLFFLLFNVDAQSPSSESDATSGDAVSNFRPSLAVVIGVLCVMFSLTLFLLVYAK 64

Query: 66  FCHQTSHLRGEPQAHLGLGLLRSDSRFSGIDQKVIDALPFFKFSSLKGSREGLECAVCLS 125
           FCH+ + + G+   H G+ L R+ S+FSGID+KVI++LPFFKFSSLKGS++GLECAVCLS
Sbjct: 65  FCHRGATVHGD--RHPGI-LHRTRSQFSGIDKKVIESLPFFKFSSLKGSKQGLECAVCLS 124

Query: 126 KFEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPLCRCRISVEDVAFFTYSNSMRLMRNN 185
           KFEDIE+LRLLPKCKHAFHIGCID WLE+HSSCPLCR +I+ ED   FTYSNSMR + N 
Sbjct: 125 KFEDIEILRLLPKCKHAFHIGCIDRWLERHSSCPLCRQKINTEDPTIFTYSNSMRFLWN- 184

Query: 186 SQPELPQDSQMELFVQREKDHHNSSRFNTGTSFRKIGKGNKEKEVLIENEAGECESEERV 245
            Q EL +DS MEL++QRE++ H SSRF+ G+S RKI KGN E EVLI+ EA + + + RV
Sbjct: 185 -QSELREDSNMELYIQREQESHGSSRFSIGSSSRKIEKGNIENEVLIQEEAADEDDDGRV 244

Query: 246 LFHKHKHKILVSDFVFMNRWSNLSSSDLMFLNTEMLGAMSSNRFSSLDSESVCRSA-TRE 305
            FHK KHKI+VSD V  NRWS++SSSDLMFLN+EML  MSSNRFSSL++    +S  TR 
Sbjct: 245 -FHKFKHKIIVSDVVLKNRWSSVSSSDLMFLNSEMLNEMSSNRFSSLETNDHGQSTITRP 304

Query: 306 SEGKRTSQIKEEMEMKRSFERRISIAEKNSLVSISGIPSICDFNASTSRTT---NLNERR 365
            E K+  +IKEE+E+KR FE ++S   KN+ VS   +PS  +F+A++S T+   N  E+R
Sbjct: 305 IENKQIMKIKEELEIKRLFESKVSSINKNNPVSAPALPSTSNFSATSSHTSMIVNQAEKR 364

Query: 366 SVSDTTAFSRFGHFN-ENAIRDSSMIEADAKNYRVRQIWLPIAKRTVQWFANREQRSKLS 423
           S+S+ TA SRF   +  N    S + E + K  R+R++WLPIA++TVQWFANRE   +  
Sbjct: 365 SMSEITALSRFRDVSPRNRTSQSLLSETNTKEERIRRLWLPIARKTVQWFANRESSQQSQ 424

[Close]

BLAST of Cla004112 vs. NCBI nr
Match: gi|645274892|ref|XP_008242555.1| (PREDICTED: E3 ubiquitin-protein ligase ATL42 [Prunus mume])

HSP 1 Score: 432.2 bits (1110), Expect = 1.1e-117
Identity = 230/416 (55.29%), Postives = 299/416 (71.88%), Query Frame = 1


Query: 5   SRIIMIIMTISLSPVNAQAPPSPKADSDIPQNF----TIVIGILSIMFSLAFILVLYAKF 64
           S +I++++   +  V AQ   S    SD   NF     +VIGIL+IMF+L F+L++YAKF
Sbjct: 33  SSLIVLLLNCVVFHVEAQISGS-NFPSDEQSNFEPSVAVVIGILAIMFTLTFVLLVYAKF 92

Query: 65  CHQTSHLRGEPQAHLGLGLLRSDSRFSGIDQKVIDALPFFKFSSLKGSREGLECAVCLSK 124
           CH+  ++ G    H   G++ + SRFSGID+KVI+ALP+F+FSSL+GS+EGLEC+VCLSK
Sbjct: 93  CHRRDYVGGNN--HQRTGVISTSSRFSGIDKKVIEALPYFRFSSLRGSKEGLECSVCLSK 152

Query: 125 FEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPLCRCRISVEDVAFFTYSNSMRLMRNNS 184
           FEDIEVLRLLPKCKHAFHI CIDHWLEKHSSCPLCR R+S ED+ F TYS+SMR++  NS
Sbjct: 153 FEDIEVLRLLPKCKHAFHISCIDHWLEKHSSCPLCRHRVSSEDLTFITYSDSMRVLW-NS 212

Query: 185 QPELPQDSQMELFVQREKDHHNSSRFNTGTSFRKIGKG-NKEKEVLIENEAGECESEERV 244
           Q E  QDS + LFVQRE+DH  SSRF+ G+SFRK  K  +KE+E+LI  E  +   E++ 
Sbjct: 213 QSEHRQDSNIHLFVQREEDHRGSSRFSIGSSFRKTEKAVDKEEELLILEEGADMSKEDQK 272

Query: 245 LFHKHKHKILVSDFVFMNRWSNLSSSDLMFLNTEMLGAMSSNRFSSLDSESVCRSATRES 304
           + HKHKHKI+VSD  F NRWSN+SSSDLMFLN+EML  MSSNRFSS        +AT   
Sbjct: 273 ILHKHKHKIVVSDLEFKNRWSNVSSSDLMFLNSEMLNTMSSNRFSSAHLNHEPAAATGNE 332

Query: 305 EGKRTSQIKEEMEMKRSFERRISIAEKNSLVSISGIPSICDF---NASTSRTTNLNERRS 364
           E     +I+EEMEMKR FE ++S   KN+  S    PS  D+   +A  SR+ N  E+RS
Sbjct: 333 E---IMKIREEMEMKRLFETKVSTMNKNASASSPTFPSTSDYIATSAHASRSMNQGEKRS 392

Query: 365 VSDTTAFSRFGHFN-ENAIRDSSMIEADAKNYRVRQIWLPIAKRTVQWFANREQRS 412
           +S+ TA SRFG+   +N  ++ S++E + K  R+R++WLPIA+RTVQWFANRE+R+
Sbjct: 393 MSEITALSRFGNLGFKNRNKEPSLLENNVKEERMRRLWLPIARRTVQWFANREKRT 441

[Close]

BLAST of Cla004112 vs. NCBI nr
Match: gi|595819373|ref|XP_007204494.1| (hypothetical protein PRUPE_ppa019638mg [Prunus persica])

HSP 1 Score: 427.2 bits (1097), Expect = 3.4e-116
Identity = 233/425 (54.82%), Postives = 300/425 (70.59%), Query Frame = 1


Query: 5   SRIIMIIMTISLSPVNAQAPPSPKADSDIPQNF----TIVIGILSIMFSLAFILVLYAKF 64
           S +I++++   +  V AQ   S    SD   NF     +VIGIL+IMF+L F+L++YAKF
Sbjct: 4   SSLIVLLLNCVVFHVEAQISGS-NFPSDEQSNFEPSVAVVIGILAIMFALTFVLLVYAKF 63

Query: 65  CHQTSHLRGEPQAHLGLGLLRSDSRFSGIDQKVIDALPFFKFSSLKGSREGLECAVCLSK 124
           CH+ +++ G    H    ++ + SRFSGID+ VI+ALP+F+FSSL+GS+EGLEC+VCLSK
Sbjct: 64  CHRRAYVGGNN--HRRTEVISTSSRFSGIDKTVIEALPYFRFSSLRGSKEGLECSVCLSK 123

Query: 125 FEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPLCRCRISVEDVAFFTYSNSMRLMRNNS 184
           FEDIEVLRLLPKCKHAFHI CIDHWLEKHSSCPLCR RIS ED+ F TYS+SMR+   NS
Sbjct: 124 FEDIEVLRLLPKCKHAFHISCIDHWLEKHSSCPLCRHRISSEDLTFITYSDSMRVFW-NS 183

Query: 185 QPELPQDSQMELFVQREKDHHNSSRFNTGTSFRKIGKG-NKEKEVLIENEAGECESEERV 244
           Q E  QDS +ELFVQRE+D   SSRF+ G+SFRK  K  +KE+E+LI  E  +   E++ 
Sbjct: 184 QSEHRQDSNIELFVQREEDRRGSSRFSIGSSFRKTEKAVDKEEELLILEEGADMSKEDQK 243

Query: 245 LFHKHKHKILVSDFVFMNRWSNLSSSDLMFLNTEMLGAMSSNRFSSLDSESVCRSATRES 304
           + HKHKHKI+VSD  F NRWSN+SSSDLMFLN+EML  MSSNRFSS        +AT   
Sbjct: 244 ILHKHKHKIVVSDLEFKNRWSNVSSSDLMFLNSEMLNTMSSNRFSSARLNHEPATATGNE 303

Query: 305 EGKRTSQIKEEMEMKRSFERRISIAEKNSLVSISGIPSICDF---NASTSRTTNLNERRS 364
           E     +I+EEMEMKR FE ++S   KN+  S    PS  D+   +A  SR+ N  E+RS
Sbjct: 304 E---IMKIREEMEMKRLFENKVSTMNKNASASSPTFPSTSDYIATSAHASRSMNQGEKRS 363

Query: 365 VSDTTAFSRFGHFN-ENAIRDSSMIEADAKNYRVRQIWLPIAKRTVQWFANREQRSKLSK 421
           +S+ TA SRFG+   +N  ++ S++E + K  R+R++WLPIA+RTVQWFANRE+R     
Sbjct: 364 MSEITALSRFGNLGFKNRNKEPSLLENNVKEERMRRLWLPIARRTVQWFANREKR----- 415

[Close]

BLAST of Cla004112 vs. NCBI nr
Match: gi|225445146|ref|XP_002280643.1| (PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera])

HSP 1 Score: 419.9 bits (1078), Expect = 5.4e-114
Identity = 229/433 (52.89%), Postives = 308/433 (71.13%), Query Frame = 1


Query: 1   MSKFSRIIMIIMTISLSPVNAQAPP------SPKADSDIPQNFTIVIGILSIMFSLAFIL 60
           M+++S II  +++  L  V +QA P      S  A +    +  +VIGIL++MF L FIL
Sbjct: 1   MNRWSSIIWFLLSGLLFNVESQAAPGQENFSSQDAVTAFKPSLAVVIGILAVMFLLTFIL 60

Query: 61  VLYAKFCHQTSHLRGEPQAHLGLGLLRSDSRFSGIDQKVIDALPFFKFSSLKGSREGLEC 120
           ++YAK CH+ S+   E Q     GL RS+SRFSGID+ VI++LPFF+F SLKGS+EGLEC
Sbjct: 61  LVYAKLCHRASNSDRENQQ----GLTRSESRFSGIDKTVIESLPFFRFCSLKGSKEGLEC 120

Query: 121 AVCLSKFEDIEVLRLLPKCKHAFHIGCIDHWLEKHSSCPLCRCRISVEDVAFFTYSNSMR 180
           AVCLSKFEDIE+LRLLPKCKHAFHI C+D WLEKHSSCPLCR ++S ED+A  TYSNS+R
Sbjct: 121 AVCLSKFEDIEILRLLPKCKHAFHIDCVDQWLEKHSSCPLCRHKVSAEDLAILTYSNSLR 180

Query: 181 LMRNNSQPELPQDSQMELFVQREKDHHNSSRFNTGTSFRKIGKGNKEKE-VLIENEAGEC 240
            + N  Q EL ++S +ELFVQRE+DHH SSRF+ G+SFRK+ KG KE+E VLI+ E  E 
Sbjct: 181 FLWN--QSELRENSNLELFVQREEDHHGSSRFSIGSSFRKVEKGVKEEESVLIQEE--ED 240

Query: 241 ESEERVLFHKHKHKILVSDFVFMNRWSNLSSSDLMFLNTEMLGAMSSNRFSSLDSESVCR 300
           ++++  + HK  HKI+VSD V  NRWS++SSSDLM+LN+E++ AMSS+RF+SLDS +   
Sbjct: 241 DNDDEKILHKINHKIIVSDVVLKNRWSSVSSSDLMYLNSELVHAMSSDRFASLDSNN--S 300

Query: 301 SATRESEGKRTSQIKEEMEMKRSFERRISIAEKNSLVSISGIPSICDFNAST---SRTTN 360
           +  R  E     +IKEE+E KR FE R+S    ++ VS SG+PS     A++   SR  +
Sbjct: 301 AMGRPIEDWEVMKIKEEIERKRIFESRVSRINHSNPVSSSGLPSTSKTEANSGHASRFLH 360

Query: 361 LNERRSVSDTTAFSRFGHFN-ENAIRDSSMIEADAKNYRVRQIWLPIAKRTVQWFANREQ 420
             E+RS+S+ TA SR+  F+ +N IR+SS+ + + K  R+R++WLPIA+RTV+WFANRE 
Sbjct: 361 PTEKRSMSEITACSRYADFSTKNRIRESSLAQNNIKEERMRRLWLPIARRTVEWFANREG 420

Query: 421 RSKLSKYTQQPDV 423
             +     Q PDV
Sbjct: 421 SQQSQNTKQAPDV 423

The following BLAST results are available for this feature:

BLAST of Cla004112 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL42_ARATH	9.7e-87	43.97	E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42 PE=1 SV=2	[more]
ATL12_ARATH	9.7e-79	42.56	Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana GN=ATL12 PE=3 SV=1	[more]
ATL43_ARATH	8.0e-33	37.66	RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2 SV=2	[more]
ATL52_ARATH	4.9e-22	40.14	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1	[more]
ATL32_ARATH	1.9e-21	36.59	RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2 SV=3	[more]

BLAST of Cla004112 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061GMH2_THECC	6.7e-119	54.91	RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_037822 PE=4 S...	[more]
M5W8V8_PRUPE	2.4e-116	54.82	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019638mg PE=4 SV=1	[more]
F6HH04_VITVI	3.8e-114	52.89	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g03420 PE=4 SV=...	[more]
M5W654_PRUPE	4.2e-113	58.09	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026744mg PE=4 S...	[more]
B9ILR6_POPTR	3.5e-112	55.80	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s09200g PE=4 SV=2	[more]

BLAST of Cla004112 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1009160610\|ref\|XP_015898444.1\|	2.7e-121	55.56	PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Ziziphus jujuba]	[more]
gi\|590576887\|ref\|XP_007013082.1\|	9.6e-119	54.91	RING/U-box superfamily protein, putative [Theobroma cacao]	[more]
gi\|645274892\|ref\|XP_008242555.1\|	1.1e-117	55.29	PREDICTED: E3 ubiquitin-protein ligase ATL42 [Prunus mume]	[more]
gi\|595819373\|ref\|XP_007204494.1\|	3.4e-116	54.82	hypothetical protein PRUPE_ppa019638mg [Prunus persica]	[more]
gi\|225445146\|ref\|XP_002280643.1\|	5.4e-114	52.89	PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla004112	Cla004112.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 113..156 score: 4.4
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 114..155 score: 7.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 114..156 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 110..159 score: 1.5
None	No IPR available	unknown	Coil	Coil	coord: 307..327 scor
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 6..181 score: 1.2
None	No IPR available	PANTHER	PTHR14155:SF95	E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED	coord: 6..181 score: 1.2
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 93..161 score: 8.25

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla004112	Silver-seed gourd	carwmB0039
Cla004112	Silver-seed gourd	carwmB0127
Cla004112	Silver-seed gourd	carwmB0571
Cla004112	Cucumber (Chinese Long) v3	cucwmB186
Cla004112	Watermelon (97103) v2	wmwmbB393
Cla004112	Watermelon (97103) v2	wmwmbB406
Cla004112	Wax gourd	wgowmB155
Cla004112	Wax gourd	wgowmB680
Cla004112	Watermelon (97103) v1	wmwmB039
Cla004112	Watermelon (97103) v1	wmwmB163
Cla004112	Cucumber (Gy14) v1	cgywmB176
Cla004112	Cucurbita maxima (Rimu)	cmawmB070
Cla004112	Cucurbita maxima (Rimu)	cmawmB137
Cla004112	Cucurbita maxima (Rimu)	cmawmB181
Cla004112	Cucurbita maxima (Rimu)	cmawmB773
Cla004112	Cucurbita moschata (Rifu)	cmowmB062
Cla004112	Cucurbita moschata (Rifu)	cmowmB123
Cla004112	Cucurbita moschata (Rifu)	cmowmB168
Cla004112	Cucurbita moschata (Rifu)	cmowmB767
Cla004112	Melon (DHL92) v3.5.1	mewmB254
Cla004112	Melon (DHL92) v3.5.1	mewmB290
Cla004112	Melon (DHL92) v3.5.1	mewmB291
Cla004112	Melon (DHL92) v3.5.1	mewmB433
Cla004112	Watermelon (Charleston Gray)	wcgwmB112
Cla004112	Watermelon (Charleston Gray)	wcgwmB344
Cla004112	Cucumber (Chinese Long) v2	cuwmB174
Cla004112	Cucumber (Chinese Long) v2	cuwmB612
Cla004112	Cucurbita pepo (Zucchini)	cpewmB375
Cla004112	Cucurbita pepo (Zucchini)	cpewmB680
Cla004112	Cucurbita pepo (Zucchini)	cpewmB821
Cla004112	Bottle gourd (USVL1VR-Ls)	lsiwmB122
Cla004112	Bottle gourd (USVL1VR-Ls)	lsiwmB419
Cla004112	Cucumber (Gy14) v2	cgybwmB165
Cla004112	Cucumber (Gy14) v2	cgybwmB413
Cla004112	Melon (DHL92) v3.6.1	medwmB284
Cla004112	Melon (DHL92) v3.6.1	medwmB285
Cla004112	Melon (DHL92) v3.6.1	medwmB421