Cla003988 (gene) Watermelon (97103) v1

NameCla003988
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPoly(A) RNA polymerase protein 2 (AHRD V1 *--- PAP2_YEAST)
LocationChr7 : 3341512 .. 3345597 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGTTTCATGCTGGATCGTGTCATGAAGGATGTACTTCGTGTGGTTGAACCATTGCAAGATGATTGGGCGGCACGATTTCAAATCATCAACGAGTTGCGGGATGTTGTGCAATCTATTGAAAGTCTTCGAGGTTCTGCTTGTGTTCTGCAGATATTTTTTGTTTAAAAACCTTCTATACAATCATAAAAAGGGTTGTTGAATCAATGACATGACCCTGTGACTTGAGGTTGATAGTTTTTCTTATATGACATTTTGGTTAATCGGTCAAAGCAGGTGCAACAGTTGAGCCATTTGGATCCTTTGTATCTAACCTGTTTTCGCGATGGGGAGACTTGGATCTCTCTATTCAATTGCACAATGGTTCTTATATTTCAACTGCTGGGAAGAAGCATAAGCAGAGTTTACTGAAAGATATCCAAAAGGCATTGAGGAAAAAAGGTGCTCTTCAACTACTCAATACTTCTTTCCTTTTCCCTCATCTTAGTTTGCTTAACTTAGGAGCTGGTAAGACGTCACTAGGAAAGTTAAGGTTAACTTAATATAATAATATTTCTTGACATTATGAAGTAGTTTTTCCTTTTACTATGTAGAGTTTTTAAATAATTGACAGGAATCAAAATTGTGGTTGATTTCATAGCATGAACATTGCAAGAACTAAATGTAACTGTATGAATGTAGGTTTCAAATATGTGTCACATAACTATCTGCATTCAATTTAATGCATGTTGATTGGTTTTTTTAAAACCATAGAATGGTATTAGCCACCTTGCTATAGGACTGGCCTGCCTAGTTATTCTCGGATTACTGTGTGGTGAGAGTTGGTTGTGAGGGAGGATTGCTCTCTTTCAGATTTTGGTTTTCTTATTCCTTGAAATTTCTTTTTGCAGGTGGATGGTACAAGCTACAATTAATTCCTCATGCTAGAGTACCTATTTTGAAGATCGAAAATATTCAGCACAACATTTCCTGTGATATTTCCATTGATAATCTTGTGGGCCAAATGAAGTCTAAAATTTTGTTGTGGCTTAATGAAATAGATGGGCGCTTCCATGATATGGTTTTGCTTGTATGTTCTTTTAGCATTGTCAAACTTGTTGACTCTCTTTGCGAGAAGTGCTTCAATGTAATTATCCTCTCTAGCTTTGTGTAGGTCAAAGAATGGGCGAAAGCACATGACATCAACAATTCAAAACAGGGAACTTTCAATTCATACTCTCTAAGTTTGCTTGTGATATTTCATTTTCAGGTGGTTTTTCTTCCAACCCTGCTCTGTCAAATGTTAATATCTACCATGACCTACTTGAATCCATTCTTTGTGCCCTTCTTGGGTGATCTTTTATTTCTGCTTTTTTTTTTTTTCTTCTTGACCAGCTTAGTTGATGTGAAACTGAGATAGAATCTTTACTGTGCAATTTGTTTGTCCAATTTTTATATTGCCATGTGTCAATTTTGTTTTCTACAATCCCGGTATTTATTATTAGGTTTTTTGCAGACATGCTCACCAGCCATCTTACCTCCTCTTAGAGACATATACCCAGGAAATGTTGCTGATAATCTCAAAGGTACTTTTGCTTAGAATTTGTTGTTTGGTGTAGCCTTATAGAAGGCCCACTGAGGCACCTGCCTAGGCCCAAAGGTGGCCTTCTTAATGAAGCGTCTCAGTGCCTTCAGCCTTACTGCCATTTTTAATGAAGAATCACAATAATACTCTTAAAAGATATTTATTATTTCCGTATAGTCTCTAAAAGTTATATTTTCTTAAACCTTTCATCATCTTGTTATGCCTCATACTATTTCTTTTTTCCATATATAAACAACTTATGGACATTTTTCTTTTAAGCCTCATAAAGAAGAGCTTGTGCTTTTCCCCCCTTCTTTTTGCACCTCACTCTTAAGCTCTGTAGGGTATTGCACTTTAGTTGTCTTGAGTTTTAAAAAACGCTGGTCTGGTGCATTCTTACTTGCTTAGAAGGGTTTTAGCTGGCAACAATGGGTAATAATTATGAACATTAGAAGGGTGTTTTTCTCTTCTTAGAAGGATAGGTTGAAAATTCGAACCTTTAACCTTTAAGATGTCATTAATGTTTTTGTCAGTTTAGATGTGCTAAGTTTAATTATAAACCTGAGACTTATGCAAATACATATGCAACTCAAAGGACTACTTGTATGTATTAGTCGAGTGGTGTTGTACTTGTAAGGAGAAAAATGAGATCATCAATAAATCTTAAATATGAGTGTGAATTGAAATGCAAAATAATGTGACATGTATGCATTGAAGCAGGTGTGAGGGCTGAGGTTGAGAGTGAAATTGCACGAATATGTGCTACCAACATAGCCAGGTTCAAATCGAGAACAGTCAACAGAAGTTCTTTGTCTGAACTTTTTGTTTCATTCCTTGCAAAGGTAATATTTTAGTTAAATTATAGTTCTTATATTATGTTGGTGCTAATATTTTTTTGGTCCGGCATTTTCTCTTGTTTGAATTTAATTTCTATAATTTTTTGTAAAATTATCAATTTGTGCATCTAGTTATCATCACATTATACCTAGTTATATTCACAATACTTAAAGCAAGCGAGACTTGATTATAGAAAATACAATGGAAACATTTGTAATATGGTTGTATATAGACAAAATATTTTACTTACACCATGTTAGCTCACTTTTATACTTTTTCCTTGGCATCAATTACGACTATCAATTGGAGATTTGGAGTACATGGATAAAATGCAGGGTCAGAAATCCGATCAATATTTAGAACCAACTGAGGGTTATGAAAAGAAACTACTTGGTTCAGTAAGCTCAGGAATTATTCTACAAATATTCCTTCTAAATCTAAACAAATGCCCCTAAGGAGTAAAGAAGATGAGTTATATGCTAAATATTTGACAATCATCCATCAGCATCGATTCCAAATAATCTTAGAAAATGTTTAAGAATGATTTTGAAATAGTTAAAATCACCATATCACTCCAAAACATGTTTTTGGTCCTTCAAAATCTATTTTGATCATATGAAAGTAGCGTTTAATAGTGTAGAACAAAATATTAAATAGATTTATGAAGGATTAAAAGCATGTTTAAGAGTAATTTTGGACATGACAAAAGAGATTTTAATCCTTTCAAAATTACTCCCAAAGATGTATGTGCTCTTATCCTACCCACCAAAGTACAAACAAGGTTGTTTATGCATCAAATCTTCTATGTAATAGTAGGCACCTGATTTTGTGATGATGACTGGGTTGCTAGTCATGTCTTTTGTCTCTATAACTATCACAATCTTCTTCCCTCTCATTGTCGGTATTGTTTTGTCTTTTGCAGTTTTCAGATATAAGTTCAAAAGCATCAGTACTAGGAATTTGTCCATACACAGGGCAATGGTTGGAAATAGAAAGCAACATGAGATGGTTGCCAAAAACATATGCAATATTTGTAATCTCTCTTTTCCTCTCTTTATGTCATATCATGCTTGCCATATGCACAAGATGGTATTTCTTTTGCCTCTTCTCTGATATTGTGATTGTGGCCGGGCATTGGGATGGTTGAACATGGACAGGTTGAAGATCCATTTGAGCAACCAGAAAATACAGCCAGGGCTATTAATGCGAGGCAATTGACGAGGATTTCTGAAGCATTTCGGATGACTCATTTGAGGCTCACCTCAGTTCATCAGAATCAAAGTTTTATCCTAAATGATTTAGCCCGACCTCAAATATCGCAATTTATCATTAACCCATCTGGATCTGCTAGTGCCCCAGTGTTCAATATAGGAAATTACCCCCCAGTTCGTCCACAGGTTCACCAAGCCAGAGCTACGCAACCCTGTCCATGGTTTCGACATCAGTTCCAGAACAATGTTCCCAGGTTCAATATGGGAAACTTCCCACCTATCAATCCACAGGATCCTCACGCTGGAACTACACAGTCTCGCCCACCGGTTCAACACAAAACGCCAAAAACAAAACGTATAGTAAGCAATCCTAACAGTTTGAAAGTGGGGGAGCCCTCAACGCCCTCTAAGACTTATAATGGTCAAGGCCAGCAAAAGTGGAGACCAAGATCCCAGAGACAGGTATTGTGA

mRNA sequence

ATGAATGGTTTCATGCTGGATCGTGTCATGAAGGATGTACTTCGTGTGGTTGAACCATTGCAAGATGATTGGGCGGCACGATTTCAAATCATCAACGAGTTGCGGGATGTTGTGCAATCTATTGAAAGTCTTCGAGGTGCAACAGTTGAGCCATTTGGATCCTTTGTATCTAACCTGTTTTCGCGATGGGGAGACTTGGATCTCTCTATTCAATTGCACAATGGTTCTTATATTTCAACTGCTGGGAAGAAGCATAAGCAGAGTTTACTGAAAGATATCCAAAAGGCATTGAGGAAAAAAGGTGCTCTTCAACTACTCAATACTTCTTTCCTTTTCCCTCATCTTAGTTTGCTTAACTTAGGAGCTGGTGGATGGTACAAGCTACAATTAATTCCTCATGCTAGAGTACCTATTTTGAAGATCGAAAATATTCAGCACAACATTTCCTGTGATATTTCCATTGATAATCTTGTGGGCCAAATGAAGTCTAAAATTTTGTTGTGGCTTAATGAAATAGATGGGCGCTTCCATGATATGGTTTTGCTTGTCAAAGAATGGGCGAAAGCACATGACATCAACAATTCAAAACAGGGAACTTTCAATTCATACTCTCTAAGTTTGCTTGTGATATTTCATTTTCAGACATGCTCACCAGCCATCTTACCTCCTCTTAGAGACATATACCCAGGAAATGTTGCTGATAATCTCAAAGGTGTGAGGGCTGAGGTTGAGAGTGAAATTGCACGAATATGTGCTACCAACATAGCCAGGTTCAAATCGAGAACAGTCAACAGAAGTTCTTTGTCTGAACTTTTTGTTTCATTCCTTGCAAAGTTTTCAGATATAAGTTCAAAAGCATCAGTACTAGGAATTTGTCCATACACAGGGCAATGGTTGGAAATAGAAAGCAACATGAGATGGTTGCCAAAAACATATGCAATATTTGTTGAAGATCCATTTGAGCAACCAGAAAATACAGCCAGGGCTATTAATGCGAGGCAATTGACGAGGATTTCTGAAGCATTTCGGATGACTCATTTGAGGCTCACCTCAGTTCATCAGAATCAAAGTTTTATCCTAAATGATTTAGCCCGACCTCAAATATCGCAATTTATCATTAACCCATCTGGATCTGCTAGTGCCCCAGTGTTCAATATAGGAAATTACCCCCCAGTTCGTCCACAGGTTCACCAAGCCAGAGCTACGCAACCCTGTCCATGGTTTCGACATCAGTTCCAGAACAATGTTCCCAGGTTCAATATGGGAAACTTCCCACCTATCAATCCACAGGATCCTCACGCTGGAACTACACAGTCTCGCCCACCGGTTCAACACAAAACGCCAAAAACAAAACGTATAGTAAGCAATCCTAACAGTTTGAAAGTGGGGGAGCCCTCAACGCCCTCTAAGACTTATAATGGTCAAGGCCAGCAAAAGTGGAGACCAAGATCCCAGAGACAGGTATTGTGA

Coding sequence (CDS)

ATGAATGGTTTCATGCTGGATCGTGTCATGAAGGATGTACTTCGTGTGGTTGAACCATTGCAAGATGATTGGGCGGCACGATTTCAAATCATCAACGAGTTGCGGGATGTTGTGCAATCTATTGAAAGTCTTCGAGGTGCAACAGTTGAGCCATTTGGATCCTTTGTATCTAACCTGTTTTCGCGATGGGGAGACTTGGATCTCTCTATTCAATTGCACAATGGTTCTTATATTTCAACTGCTGGGAAGAAGCATAAGCAGAGTTTACTGAAAGATATCCAAAAGGCATTGAGGAAAAAAGGTGCTCTTCAACTACTCAATACTTCTTTCCTTTTCCCTCATCTTAGTTTGCTTAACTTAGGAGCTGGTGGATGGTACAAGCTACAATTAATTCCTCATGCTAGAGTACCTATTTTGAAGATCGAAAATATTCAGCACAACATTTCCTGTGATATTTCCATTGATAATCTTGTGGGCCAAATGAAGTCTAAAATTTTGTTGTGGCTTAATGAAATAGATGGGCGCTTCCATGATATGGTTTTGCTTGTCAAAGAATGGGCGAAAGCACATGACATCAACAATTCAAAACAGGGAACTTTCAATTCATACTCTCTAAGTTTGCTTGTGATATTTCATTTTCAGACATGCTCACCAGCCATCTTACCTCCTCTTAGAGACATATACCCAGGAAATGTTGCTGATAATCTCAAAGGTGTGAGGGCTGAGGTTGAGAGTGAAATTGCACGAATATGTGCTACCAACATAGCCAGGTTCAAATCGAGAACAGTCAACAGAAGTTCTTTGTCTGAACTTTTTGTTTCATTCCTTGCAAAGTTTTCAGATATAAGTTCAAAAGCATCAGTACTAGGAATTTGTCCATACACAGGGCAATGGTTGGAAATAGAAAGCAACATGAGATGGTTGCCAAAAACATATGCAATATTTGTTGAAGATCCATTTGAGCAACCAGAAAATACAGCCAGGGCTATTAATGCGAGGCAATTGACGAGGATTTCTGAAGCATTTCGGATGACTCATTTGAGGCTCACCTCAGTTCATCAGAATCAAAGTTTTATCCTAAATGATTTAGCCCGACCTCAAATATCGCAATTTATCATTAACCCATCTGGATCTGCTAGTGCCCCAGTGTTCAATATAGGAAATTACCCCCCAGTTCGTCCACAGGTTCACCAAGCCAGAGCTACGCAACCCTGTCCATGGTTTCGACATCAGTTCCAGAACAATGTTCCCAGGTTCAATATGGGAAACTTCCCACCTATCAATCCACAGGATCCTCACGCTGGAACTACACAGTCTCGCCCACCGGTTCAACACAAAACGCCAAAAACAAAACGTATAGTAAGCAATCCTAACAGTTTGAAAGTGGGGGAGCCCTCAACGCCCTCTAAGACTTATAATGGTCAAGGCCAGCAAAAGTGGAGACCAAGATCCCAGAGACAGGTATTGTGA

Protein sequence

MNGFMLDRVMKDVLRVVEPLQDDWAARFQIINELRDVVQSIESLRGATVEPFGSFVSNLFSRWGDLDLSIQLHNGSYISTAGKKHKQSLLKDIQKALRKKGALQLLNTSFLFPHLSLLNLGAGGWYKLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDMVLLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLKGVRAEVESEIARICATNIARFKSRTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTGQWLEIESNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSVHQNQSFILNDLARPQISQFIINPSGSASAPVFNIGNYPPVRPQVHQARATQPCPWFRHQFQNNVPRFNMGNFPPINPQDPHAGTTQSRPPVQHKTPKTKRIVSNPNSLKVGEPSTPSKTYNGQGQQKWRPRSQRQVL
BLAST of Cla003988 vs. Swiss-Prot
Match: HESO1_ARATH (Protein HESO1 OS=Arabidopsis thaliana GN=HESO1 PE=1 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 5.7e-115
Identity = 230/457 (50.33%), Postives = 295/457 (64.55%), Query Frame = 1

Query: 6   LDRVMKDVLRVVEPLQDDWAARFQIINELRDVVQSIESLRGATVEPFGSFVSNLFSRWGD 65
           LD  ++++L+V++P + D   R  +I++LRDV+QS+E LRGATV+PFGSFVSNLF+RWGD
Sbjct: 7   LDPTLQEILQVIKPTRADRDTRITVIDQLRDVLQSVECLRGATVQPFGSFVSNLFTRWGD 66

Query: 66  LDLSIQLHNGSYISTAGKKHKQSLLKDIQKALRKKGALQLLNTSFLFPHLSLLNLGAGGW 125
           LD+S+ L +GS I   GKK KQ+LL  + +ALR  G                       W
Sbjct: 67  LDISVDLFSGSSILFTGKKQKQTLLGHLLRALRASGL----------------------W 126

Query: 126 YKLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDMVLLVKE 185
           YKLQ + HARVPILK+ +    ISCDISIDNL G +KS+ L W++EIDGRF D+VLLVKE
Sbjct: 127 YKLQFVIHARVPILKVVSGHQRISCDISIDNLDGLLKSRFLFWISEIDGRFRDLVLLVKE 186

Query: 186 WAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLKGVRAEVES 245
           WAKAH+IN+SK GTFNSYSLSLLVIFHFQTC PAILPPLR IYP +  D+L GVR   E 
Sbjct: 187 WAKAHNINDSKTGTFNSYSLSLLVIFHFQTCVPAILPPLRVIYPKSAVDDLTGVRKTAEE 246

Query: 246 EIARICATNIARFKS---RTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTGQWLEIE 305
            IA++ A NIARFKS   ++VNRSSLSEL VSF AKFSDI+ KA   G+CP+TG+W  I 
Sbjct: 247 SIAQVTAANIARFKSERAKSVNRSSLSELLVSFFAKFSDINVKAQEFGVCPFTGRWETIS 306

Query: 306 SNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSVHQNQSFILND 365
           SN  WLPKTY++FVEDPFEQP N AR+++ R L RI++ F++T  RL S   N++ I+  
Sbjct: 307 SNTTWLPKTYSLFVEDPFEQPVNAARSVSRRNLDRIAQVFQITSRRLVS-ECNRNSIIGI 366

Query: 366 LARPQISQFIIN----PSGSASAPVFNIGN-YPPVRPQVHQARATQPCPWFRHQFQNNVP 425
           L    I + +      PS   +  + N+ N +   RPQ  Q +      W +     N P
Sbjct: 367 LTGQHIQESLYRTISLPSQHHANGMHNVRNLHGQARPQNQQMQQN----WSQSYNTPNPP 426

Query: 426 RFNMGNFPPINPQDPHAGTTQS-------RPPVQHKT 448
                ++PP+    P    TQ+       +PPVQ +T
Sbjct: 427 -----HWPPLTQSRPQQNWTQNNPRNLQGQPPVQGQT 431

BLAST of Cla003988 vs. Swiss-Prot
Match: GLD2_MOUSE (Poly(A) RNA polymerase GLD2 OS=Mus musculus GN=Papd4 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.8e-18
Identity = 64/211 (30.33%), Postives = 107/211 (50.71%), Query Frame = 1

Query: 124 GWYKLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDMVLLV 183
           G+ +   +  A+VPI+K  +    +  D++++N VG   + +L     ++ R   +VL++
Sbjct: 252 GYIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNTVGIRNTFLLRTYAYLENRVRPLVLVI 311

Query: 184 KEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLKGVRAEV 243
           K+WA  HDIN++ +GT +SYSL L+V+ + QT    ILP L+ IYP       +     V
Sbjct: 312 KKWASHHDINDASRGTLSSYSLVLMVLHYLQTLPEPILPSLQKIYP-------ESFSTSV 371

Query: 244 ESEIARICATNIARFKSRTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTGQWLEIES 303
           +  +      N+  + S+  N SSL +L + FL K+       +   I     + +    
Sbjct: 372 QLHLVHHAPCNVPPYLSK--NESSLGDLLLGFL-KYYATEFDWNTQMISVREAKAIPRPD 431

Query: 304 NMRWLPKTYAIFVEDPFEQPENTARAINARQ 335
           +M W  K   I VE+PF+   NTARA++ +Q
Sbjct: 432 DMEWRNK--YICVEEPFD-GTNTARAVHEKQ 449

BLAST of Cla003988 vs. Swiss-Prot
Match: GLD2_RAT (Poly(A) RNA polymerase GLD2 OS=Rattus norvegicus GN=Papd4 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.1e-17
Identity = 63/211 (29.86%), Postives = 107/211 (50.71%), Query Frame = 1

Query: 124 GWYKLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDMVLLV 183
           G+ +   +  A+VPI+K  +    +  D++++N VG   + +L     ++ R   +VL++
Sbjct: 252 GYIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNTVGIRNTFLLRTYAYLENRVRPLVLVI 311

Query: 184 KEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLKGVRAEV 243
           K+WA  H+IN++ +GT +SYSL L+V+ + QT    ILP L+ IYP       +     V
Sbjct: 312 KKWASHHEINDASRGTLSSYSLVLMVLHYLQTLPEPILPSLQKIYP-------ESFSTSV 371

Query: 244 ESEIARICATNIARFKSRTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTGQWLEIES 303
           +  +      N+  + S+  N SSL +L + FL K+       +   I     + +    
Sbjct: 372 QLHLVHHAPCNVPPYLSK--NESSLGDLLLGFL-KYYATEFDWNTQMISVREAKAIPRPD 431

Query: 304 NMRWLPKTYAIFVEDPFEQPENTARAINARQ 335
           +M W  K   I VE+PF+   NTARA++ +Q
Sbjct: 432 DMEWRNK--YICVEEPFD-GTNTARAVHEKQ 449

BLAST of Cla003988 vs. Swiss-Prot
Match: GLD2_DANRE (Poly(A) RNA polymerase GLD2 OS=Danio rerio GN=papd4 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-17
Identity = 77/245 (31.43%), Postives = 126/245 (51.43%), Query Frame = 1

Query: 127 KLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDMVLLVKEW 186
           K QLI  A+VPI+K  +    +  D++ +N VG   + +L     ++ R   +VL++K+W
Sbjct: 256 KPQLI-RAKVPIVKFRDRISGVEFDLNFNNTVGIRNTFLLRTYAFVEKRVRPLVLVIKKW 315

Query: 187 AKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLKGVRAEVESE 246
           A  H IN++ +GT +SY+L L+V+ + QT    ++P L+  YP            +++  
Sbjct: 316 ANHHCINDASRGTLSSYTLVLMVLHYLQTLPEPVIPCLQRDYP-------TCFDPKMDIH 375

Query: 247 IARICATNIARFKSRTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTGQWLEIESNMR 306
           +     ++I  F SR  N+SSL +LF+ FL  ++ +  K     I     + L   +   
Sbjct: 376 LVPSGPSDIPAFVSR--NQSSLGDLFLGFLRYYATV-FKWDKQVISVRMARTLPKSNCKE 435

Query: 307 WLPKTYAIFVEDPFEQPENTARAINAR-QLTRISEAFRMTHLRLTSVHQNQSFIL---ND 366
           W  K   I VE+PF +  NTARA++ R +   I  AF  +H RL  + ++ +FIL     
Sbjct: 436 W--KDKFICVEEPFNR-TNTARAVHERMKFEAIKAAFIESH-RLLQLRKDLNFILPKSKQ 485

Query: 367 LARPQ 368
           +ARPQ
Sbjct: 496 MARPQ 485

BLAST of Cla003988 vs. Swiss-Prot
Match: GLD2_BOVIN (Poly(A) RNA polymerase GLD2 OS=Bos taurus GN=PAPD4 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.5e-17
Identity = 60/211 (28.44%), Postives = 110/211 (52.13%), Query Frame = 1

Query: 124 GWYKLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDMVLLV 183
           G+ +   +  A+VPI+K  +    +  D++++N+VG   + +L     ++ R   +VL++
Sbjct: 252 GYIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLVI 311

Query: 184 KEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLKGVRAEV 243
           K+WA  HDIN++ +GT +SYSL L+V+ + QT    ILP ++ IYP + + +       +
Sbjct: 312 KKWASHHDINDASRGTLSSYSLVLMVLHYLQTLPEPILPSIQKIYPESFSPS-------I 371

Query: 244 ESEIARICATNIARFKSRTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTGQWLEIES 303
           +  +      N+  + S+  N S+L +L + FL  ++      S + I     + +    
Sbjct: 372 QLHLVHQAPCNVPPYLSK--NESNLGDLLLGFLKYYATEFDWNSQM-ISVREAKAIPRPD 431

Query: 304 NMRWLPKTYAIFVEDPFEQPENTARAINARQ 335
            + W  K   I VE+PF+   NTARA++ +Q
Sbjct: 432 GIEWRNK--YICVEEPFD-GTNTARAVHEKQ 449

BLAST of Cla003988 vs. TrEMBL
Match: A0A0A0KLX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G184290 PE=4 SV=1)

HSP 1 Score: 817.8 bits (2111), Expect = 7.2e-234
Identity = 409/489 (83.64%), Postives = 432/489 (88.34%), Query Frame = 1

Query: 1   MNGFMLDRVMKDVLRVVEPLQDDWAARFQIINELRDVVQSIESLRGATVEPFGSFVSNLF 60
           MNG  LDRV+KD+LRVVEPLQDDW ARFQ+INELR+VVQSIESLRGAT+EPFGSFVSNLF
Sbjct: 1   MNGLTLDRVIKDILRVVEPLQDDWTARFQVINELRNVVQSIESLRGATIEPFGSFVSNLF 60

Query: 61  SRWGDLDLSIQLHNGSYISTAGKKHKQSLLKDIQKALRKKGALQLLNTSFLFPHLSLLNL 120
           SRWGDLDLS+QL+NGSY STAGKK KQ+LL+DIQ A RK G                   
Sbjct: 61  SRWGDLDLSVQLNNGSYTSTAGKKRKQTLLRDIQNASRKNGR------------------ 120

Query: 121 GAGGWYKLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDMV 180
               WYKLQLIPHARVPILKIE+IQHNISCDISIDNLVGQ+KSKILLW+NEIDGRFHDMV
Sbjct: 121 ----WYKLQLIPHARVPILKIEHIQHNISCDISIDNLVGQIKSKILLWVNEIDGRFHDMV 180

Query: 181 LLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLKGVR 240
           LLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAI PPLRDIYPGNV DNLKGVR
Sbjct: 181 LLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAIFPPLRDIYPGNVVDNLKGVR 240

Query: 241 AEVESEIARICATNIARFKSRTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTGQWLE 300
           AEVE+EIAR CATNIARFKSRT NRSSLSELFVSFLAKFSDISSKAS LGICPYTGQWL+
Sbjct: 241 AEVENEIARTCATNIARFKSRTANRSSLSELFVSFLAKFSDISSKASELGICPYTGQWLK 300

Query: 301 IESNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSVHQNQSFIL 360
           IESNMRWLPKTYAIFVEDPFEQPENTARAINARQL RISEAFRMTHLRLTSV+QN+S IL
Sbjct: 301 IESNMRWLPKTYAIFVEDPFEQPENTARAINARQLMRISEAFRMTHLRLTSVYQNRSSIL 360

Query: 361 NDLARPQISQFIINPSGSASAPVFNIGNYPPVRPQVHQARATQPCPWFRHQFQNNVPRFN 420
           NDLARPQISQ IIN SGSASAP FN+ NY P+RPQVHQAR  QP PW +HQFQNN+PRFN
Sbjct: 361 NDLARPQISQLIINSSGSASAPAFNVENYTPIRPQVHQARVMQPRPWIQHQFQNNIPRFN 420

Query: 421 MGNFPPINPQDPHAGTTQSRPPVQHKTPKTKRIVSNPNSLKVGEPSTPSKTYNGQGQQKW 480
           MGNFP IN Q PHAGT+QS P VQHKTPKTKRIVS+PN L VGE   PSKTY+GQGQQKW
Sbjct: 421 MGNFPAINSQAPHAGTSQSHPLVQHKTPKTKRIVSSPNVLNVGE---PSKTYSGQGQQKW 464

Query: 481 RPRSQRQVL 490
           RPRSQRQVL
Sbjct: 481 RPRSQRQVL 464

BLAST of Cla003988 vs. TrEMBL
Match: A0A061FL95_THECC (Zinc finger protein, putative OS=Theobroma cacao GN=TCM_042737 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 3.9e-139
Identity = 275/508 (54.13%), Postives = 351/508 (69.09%), Query Frame = 1

Query: 1   MNGF-MLDRVMKDVLRVVEPLQDDWAARFQIINELRDVVQSIESLRGATVEPFGSFVSNL 60
           MN +  ++  +++VL V++PL++DW  R +II+ELR+VVQS+ESLRGATVEPFGS VSNL
Sbjct: 1   MNSYSQVESTLQEVLEVIKPLREDWVTRQKIIDELREVVQSMESLRGATVEPFGSLVSNL 60

Query: 61  FSRWGDLDLSIQLHNGSYISTAGKKHKQSLLKDIQKALRKKGALQLLNTSFLFPHLSLLN 120
           F+RWGDLD+SI+L  GSY+S+AGKK KQ+LL ++Q+AL++K                   
Sbjct: 61  FTRWGDLDISIELPYGSYVSSAGKKRKQTLLGELQRALKQKD------------------ 120

Query: 121 LGAGGWYKLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDM 180
               GW +LQ IPHARVPILKIE+   NISCDISIDNL GQ+KSK L WLNEIDGRF +M
Sbjct: 121 ----GWQRLQFIPHARVPILKIESRWQNISCDISIDNLQGQIKSKFLFWLNEIDGRFREM 180

Query: 181 VLLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLKGV 240
           VLLVKEWA A+ INN K GTFNSYSL+LLVIFHFQTC+PAI PPL+DIYP NV  +L GV
Sbjct: 181 VLLVKEWASANGINNPKAGTFNSYSLTLLVIFHFQTCAPAIFPPLKDIYPRNVVTDLTGV 240

Query: 241 RAEVESEIARICATNIARFKS-RTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTGQW 300
           RA+ E  IA++C++NIARF+S RTVNRSSLSELF+SF+AKFSDI+SKAS +GIC +TGQW
Sbjct: 241 RADAERRIAQVCSSNIARFRSGRTVNRSSLSELFISFIAKFSDINSKASDMGICTFTGQW 300

Query: 301 LEIESNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSVHQNQSF 360
             I SNMRWLP+TYAIFVEDPFEQPEN +RA++ +QL +I+EAF  T   L S +  QS 
Sbjct: 301 EYITSNMRWLPRTYAIFVEDPFEQPENASRAVSQKQLIKIAEAFETTRCMLISANLTQST 360

Query: 361 ILNDLARPQISQFIINPSGSASAPVFNIGNYPPVRPQVHQARATQPCPWFRHQFQNNVP- 420
           +L  L  P+ S+FI+    S S+  +N G+YP  RPQVH+A    P    +HQ++N+ P 
Sbjct: 361 LLPTLVGPKTSRFIVKQQ-SVSSSSYNGGHYPNTRPQVHRA-VHSPLLMQQHQYRNSRPA 420

Query: 421 ---------RFNMGNFPPINPQDPHAGTTQSRPPVQHKTPKTKRIVS--NPNSLKVGEPS 480
                    +  M +   + PQ P     +SRP   H+  K+   VS   P  L+    S
Sbjct: 421 ASQMQQHQAQMVMPSPSRVQPQFPKT-RVESRPRPAHQYQKSTPSVSQVQPQFLRARPES 480

Query: 481 --------TPSKTYNGQGQQKWRPRSQR 487
                    P +  + QGQ  WRP+S +
Sbjct: 481 FSGSFATQRPVQLKHNQGQM-WRPKSDK 482

BLAST of Cla003988 vs. TrEMBL
Match: M5XRK4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005171mg PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 8.2e-137
Identity = 271/502 (53.98%), Postives = 334/502 (66.53%), Query Frame = 1

Query: 6   LDRVMKDVLRVVEPLQDDWAARFQIINELRDVVQSIESLRGATVEPFGSFVSNLFSRWGD 65
           L+  +K++LRVV+PL++DW  R QII+ELR  V+S+ESLRGATVEPFGSFVS+LF+RWGD
Sbjct: 7   LENTLKEILRVVKPLREDWTTRLQIIDELRGAVESVESLRGATVEPFGSFVSDLFTRWGD 66

Query: 66  LDLSIQLHNGSYISTAGKKHKQSLLKDIQKALRKKGALQLLNTSFLFPHLSLLNLGAGGW 125
           LD+SI+  NGS++S  GKK KQ LL D+ +A+R+KG                      GW
Sbjct: 67  LDVSIEFSNGSFVSPYGKKQKQRLLGDVMRAMRQKG----------------------GW 126

Query: 126 YKLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDMVLLVKE 185
            + QLIP+ARVPILK+E+   N+SCDISIDNL  QMKS++L W++EID RF DMVLL+KE
Sbjct: 127 RRYQLIPNARVPILKVESNLQNVSCDISIDNLKCQMKSRLLFWISEIDTRFRDMVLLIKE 186

Query: 186 WAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLKGVRAEVES 245
           WAKAH+INN K GTFNSYSL+LLV+FHFQTC+PAI PPL+DIYPGN+ D+LKG+RA+ E 
Sbjct: 187 WAKAHNINNPKFGTFNSYSLTLLVVFHFQTCAPAIFPPLKDIYPGNLIDDLKGLRADTER 246

Query: 246 EIARICATNIARFKS---RTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTGQWLEIE 305
            I   CA NI RF+S   R  NRSSLSELF+SFL KFSDIS KAS LGIC YTGQW  I+
Sbjct: 247 RIEETCAANIRRFQSYNLRAENRSSLSELFISFLGKFSDISLKASELGICTYTGQWQAIK 306

Query: 306 SNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSVHQNQSFILND 365
           SNMRWLP+TYA+F+EDPFEQPEN+ARA++ R+LTRISE F M+H  L S   N S +L  
Sbjct: 307 SNMRWLPQTYALFIEDPFEQPENSARAVSKRELTRISETFEMSHHMLIS--PNHSSLLAT 366

Query: 366 LARPQISQFII---------------NPSGSAS-APVFNIGNYPPVRPQVHQARATQPCP 425
           L RPQ+   ++                  GS S  P  N G   P RPQVH  R  +   
Sbjct: 367 LVRPQMLSLMVRTPDWRRQPTHPQRFRAEGSHSPTPSNNNGPRQPTRPQVH--RVVRSPS 426

Query: 426 WFRHQFQNNVPRFNMGNFPPINPQDPHAGTTQSRPPVQHKTPKTKRIVSNPNSLKVGEPS 485
             + Q+Q   P+      P      P  G +Q +P  Q   PK     S+PN     +P 
Sbjct: 427 QVQPQYQTVKPKGPSEVQPQYQTVKP-KGPSQVQPQFQTMNPK-----SHPNRATFKKP- 474

Query: 486 TPSKTYNGQGQQKWRPRSQRQV 489
            P +TY  Q QQ WRPRS R V
Sbjct: 487 -PLQTYEDQRQQIWRPRSDRPV 474

BLAST of Cla003988 vs. TrEMBL
Match: D7TLN7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g02230 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 3.1e-136
Identity = 268/489 (54.81%), Postives = 333/489 (68.10%), Query Frame = 1

Query: 5   MLDRVMKDVLRVVEPLQDDWAARFQIINELRDVVQSIESLRGATVEPFGSFVSNLFSRWG 64
           +L+ V+KD+L V+ P ++DWA R Q+I + R  V S+ESLRGATVEPFGSF+SNL+++WG
Sbjct: 6   VLEIVLKDILLVINPSREDWAIRNQLIADFRTAVDSVESLRGATVEPFGSFLSNLYTQWG 65

Query: 65  DLDLSIQLHNGSYISTAGKKHKQSLLKDIQKALRKKGALQLLNTSFLFPHLSLLNLGAGG 124
           DLD+SI+L NG+YIS+AGK+HKQ+LL  +  ALR KG                      G
Sbjct: 66  DLDISIELPNGAYISSAGKRHKQTLLGHVLNALRSKG----------------------G 125

Query: 125 WYKLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDMVLLVK 184
           W KLQ IP+ARVPI+K E+   NISCD+SI+NL GQMKSK L W++ IDGRF D+VLLVK
Sbjct: 126 WRKLQFIPNARVPIIKFESYHPNISCDVSINNLKGQMKSKFLFWISGIDGRFRDLVLLVK 185

Query: 185 EWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLKGVRAEVE 244
           EWA+AHDINNSK GT NSYSLSLLV+FH QTC PAILPPL++IYPGNVAD+L GVRA VE
Sbjct: 186 EWARAHDINNSKTGTLNSYSLSLLVVFHLQTCRPAILPPLKEIYPGNVADDLIGVRAVVE 245

Query: 245 SEIARICATNIARFK---SRTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTGQWLEI 304
            +I    A NI RFK   SR  NRSSLSELF+SFLAKF DI+S+AS  GICPYTGQW++I
Sbjct: 246 GQIEETSAANINRFKRDRSRAPNRSSLSELFISFLAKFVDITSRASEQGICPYTGQWVDI 305

Query: 305 ESNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSVHQNQSFILN 364
           +SNMRW+P+TY +FVEDPFEQPENTAR + +RQL RISEAF+ TH RLTS +Q+Q  +++
Sbjct: 306 DSNMRWMPRTYELFVEDPFEQPENTARGVRSRQLQRISEAFQTTHQRLTSANQDQHSLID 365

Query: 365 DLARPQISQFIIN-PSGSASAPVFNIGNYPPVRPQVHQARATQPCPWFRHQFQNNVPRFN 424
            L RPQI+QFI   PS ++SA   N     P  P V    A  P   F++ FQN      
Sbjct: 366 TLVRPQIAQFIRRAPSRNSSAYGRNNSRTYPSVPNV----ANSPLQ-FQNDFQNR----- 425

Query: 425 MGNFPPINPQDPHAGTTQSRPPVQ---HKTPKTKRIVSNPNSLKVGEPSTPSKTYNGQGQ 484
                   PQ     T+Q   PVQ   +     + + + P S  V    +  +    Q Q
Sbjct: 426 -------RPQSRPNTTSQRSAPVQARPNSVTMQRSMYTRPGSSTV--QRSVQQATQSQSQ 453

Query: 485 QKWRPRSQR 487
           + WRPRS R
Sbjct: 486 RVWRPRSDR 453

BLAST of Cla003988 vs. TrEMBL
Match: B9SDZ7_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1481410 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 3.5e-135
Identity = 264/515 (51.26%), Postives = 338/515 (65.63%), Query Frame = 1

Query: 5   MLDRVMKDVLRVVEPLQDDWAARFQIINELRDVVQSIESLRGATVEPFGSFVSNLFSRWG 64
           +L+ +++D L V++PL++DWA R +II EL+DV+ SIESLRGATVEPFGSFVSNLF+RWG
Sbjct: 6   VLEPILRDTLEVIKPLREDWAVRSKIIEELKDVIASIESLRGATVEPFGSFVSNLFTRWG 65

Query: 65  DLDLSIQLHNGSYISTAGKKHKQSLLKDIQKALRKKGALQLLNTSFLFPHLSLLNLGAGG 124
           DLD+SI L NGSYIS+A KK KQ++L++  KALR+KG                      G
Sbjct: 66  DLDISIMLANGSYISSAAKKRKQNVLREFHKALRQKG----------------------G 125

Query: 125 WYKLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDMVLLVK 184
           W +LQ +P+ARVP+LK E+ + NISCD+SIDNL GQ+KS  L WLN+IDGRF DMVLLVK
Sbjct: 126 WRRLQFVPNARVPLLKFESGRQNISCDVSIDNLQGQIKSNFLFWLNQIDGRFRDMVLLVK 185

Query: 185 EWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLKGVRAEVE 244
           EWAKAH+INN K GT NSYSLSLLVIFHFQTC PAILPPL++IYP NV D+L GVR   E
Sbjct: 186 EWAKAHNINNPKTGTLNSYSLSLLVIFHFQTCVPAILPPLKEIYPRNVVDDLTGVRTVAE 245

Query: 245 SEIARICATNIARF---KSRTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTGQWLEI 304
             I   C  NIAR+   K R VNRSSLSELF+SF AKFS IS KA+ LGIC +TGQWL+I
Sbjct: 246 ERIKETCNANIARYMSDKYRAVNRSSLSELFISFFAKFSGISLKAADLGICTFTGQWLDI 305

Query: 305 ESNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSVHQNQSFILN 364
            S MRWLPKTYA+F+EDPFEQPEN ARA++A  L +I+EAF+ T+ +L   +QN++ +L 
Sbjct: 306 RSTMRWLPKTYALFIEDPFEQPENAARAVSAGNLVKIAEAFQTTYHKLVLANQNRTSLLG 365

Query: 365 DLARPQISQFIINPSGSASAPVFNIG----NYPPVRPQVHQARATQPCPWFRHQFQNNVP 424
            L RP+I   I      A  PV N+     +Y    PQ+  +++    P  +HQFQN   
Sbjct: 366 TLVRPEILNCI------AGTPVRNLSYTSLHYQSTHPQI--SKSMYSSPQVQHQFQNMRQ 425

Query: 425 RFNMGNFPPINPQDPHAGTTQSRPPVQH----------------KTPKTKRIVSNPN--- 484
             +   F     Q+ H  ++ S+  VQ+                  P+  R+  +PN   
Sbjct: 426 EKHQKIF-TAQRQEKHPHSSNSQYRVQNTRLEKHPSYLAKQGHESHPENTRLERHPNYFA 485

Query: 485 ------SLKVGEPSTPSKTYNGQGQQKWRPRSQRQ 488
                 ++       P++ Y+GQGQQ WRP+S  Q
Sbjct: 486 MQKQESNVNTSTRKKPAQYYHGQGQQLWRPKSDGQ 489

BLAST of Cla003988 vs. NCBI nr
Match: gi|659123516|ref|XP_008461706.1| (PREDICTED: poly(A) RNA polymerase GLD2 isoform X2 [Cucumis melo])

HSP 1 Score: 840.9 bits (2171), Expect = 1.1e-240
Identity = 416/489 (85.07%), Postives = 438/489 (89.57%), Query Frame = 1

Query: 1   MNGFMLDRVMKDVLRVVEPLQDDWAARFQIINELRDVVQSIESLRGATVEPFGSFVSNLF 60
           MNG MLDRV KD+LRVVEPLQDDW ARFQ+INELR++VQSIESLRGAT+EPFGSFVSNLF
Sbjct: 1   MNGLMLDRVTKDILRVVEPLQDDWTARFQVINELRNIVQSIESLRGATIEPFGSFVSNLF 60

Query: 61  SRWGDLDLSIQLHNGSYISTAGKKHKQSLLKDIQKALRKKGALQLLNTSFLFPHLSLLNL 120
           SRWGDLDLS+QLHNGSYISTAGKK KQ+LL+DIQKA RKKG                   
Sbjct: 61  SRWGDLDLSVQLHNGSYISTAGKKRKQTLLRDIQKASRKKG------------------- 120

Query: 121 GAGGWYKLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDMV 180
              GW KLQLIPHARVPILKIE+IQHNISCDISIDNLVGQ+KSKILLWLNEIDGRFHDMV
Sbjct: 121 ---GWCKLQLIPHARVPILKIEHIQHNISCDISIDNLVGQIKSKILLWLNEIDGRFHDMV 180

Query: 181 LLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLKGVR 240
           LLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAI PPLRDIYPGNV DNLKGVR
Sbjct: 181 LLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAIFPPLRDIYPGNVVDNLKGVR 240

Query: 241 AEVESEIARICATNIARFKSRTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTGQWLE 300
           AEVE+EIA  CATNIARFKSRT NRSSLSELFVSFLAKFSDISSKAS LGICP+TGQWLE
Sbjct: 241 AEVENEIAVTCATNIARFKSRTANRSSLSELFVSFLAKFSDISSKASELGICPFTGQWLE 300

Query: 301 IESNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSVHQNQSFIL 360
           IESNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSV+QNQS IL
Sbjct: 301 IESNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSVYQNQSSIL 360

Query: 361 NDLARPQISQFIINPSGSASAPVFNIGNYPPVRPQVHQARATQPCPWFRHQFQNNVPRFN 420
           NDLARPQI Q I+N SGSASAP FN+GNYPP+RPQVHQAR  QP PW +HQFQN++PRFN
Sbjct: 361 NDLARPQILQLIMNSSGSASAPAFNVGNYPPIRPQVHQARVMQPRPWIQHQFQNDIPRFN 420

Query: 421 MGNFPPINPQDPHAGTTQSRPPVQHKTPKTKRIVSNPNSLKVGEPSTPSKTYNGQGQQKW 480
           MGNFPPIN Q PHAGT QS+PPVQHK PKTKRIVS+PN L VGEPS PSK Y+GQGQQKW
Sbjct: 421 MGNFPPINSQAPHAGTLQSQPPVQHKMPKTKRIVSSPNVLNVGEPSNPSKIYSGQGQQKW 467

Query: 481 RPRSQRQVL 490
           RPRSQRQVL
Sbjct: 481 RPRSQRQVL 467

BLAST of Cla003988 vs. NCBI nr
Match: gi|659123512|ref|XP_008461703.1| (PREDICTED: poly(A) RNA polymerase GLD2 isoform X1 [Cucumis melo])

HSP 1 Score: 836.3 bits (2159), Expect = 2.8e-239
Identity = 416/490 (84.90%), Postives = 438/490 (89.39%), Query Frame = 1

Query: 1   MNGFMLDRVMKDVLRVVEPLQDDWAARFQIINELRDVVQSIESLRGATVEPFGSFVSNLF 60
           MNG MLDRV KD+LRVVEPLQDDW ARFQ+INELR++VQSIESLRGAT+EPFGSFVSNLF
Sbjct: 1   MNGLMLDRVTKDILRVVEPLQDDWTARFQVINELRNIVQSIESLRGATIEPFGSFVSNLF 60

Query: 61  SRWGDLDLSIQLHNGSYISTAGKKHKQSLLKDIQKALRKKGALQLLNTSFLFPHLSLLNL 120
           SRWGDLDLS+QLHNGSYISTAGKK KQ+LL+DIQKA RKKG                   
Sbjct: 61  SRWGDLDLSVQLHNGSYISTAGKKRKQTLLRDIQKASRKKG------------------- 120

Query: 121 GAGGWYKLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDMV 180
              GW KLQLIPHARVPILKIE+IQHNISCDISIDNLVGQ+KSKILLWLNEIDGRFHDMV
Sbjct: 121 ---GWCKLQLIPHARVPILKIEHIQHNISCDISIDNLVGQIKSKILLWLNEIDGRFHDMV 180

Query: 181 LLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLK-GV 240
           LLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAI PPLRDIYPGNV DNLK GV
Sbjct: 181 LLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAIFPPLRDIYPGNVVDNLKAGV 240

Query: 241 RAEVESEIARICATNIARFKSRTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTGQWL 300
           RAEVE+EIA  CATNIARFKSRT NRSSLSELFVSFLAKFSDISSKAS LGICP+TGQWL
Sbjct: 241 RAEVENEIAVTCATNIARFKSRTANRSSLSELFVSFLAKFSDISSKASELGICPFTGQWL 300

Query: 301 EIESNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSVHQNQSFI 360
           EIESNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSV+QNQS I
Sbjct: 301 EIESNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSVYQNQSSI 360

Query: 361 LNDLARPQISQFIINPSGSASAPVFNIGNYPPVRPQVHQARATQPCPWFRHQFQNNVPRF 420
           LNDLARPQI Q I+N SGSASAP FN+GNYPP+RPQVHQAR  QP PW +HQFQN++PRF
Sbjct: 361 LNDLARPQILQLIMNSSGSASAPAFNVGNYPPIRPQVHQARVMQPRPWIQHQFQNDIPRF 420

Query: 421 NMGNFPPINPQDPHAGTTQSRPPVQHKTPKTKRIVSNPNSLKVGEPSTPSKTYNGQGQQK 480
           NMGNFPPIN Q PHAGT QS+PPVQHK PKTKRIVS+PN L VGEPS PSK Y+GQGQQK
Sbjct: 421 NMGNFPPINSQAPHAGTLQSQPPVQHKMPKTKRIVSSPNVLNVGEPSNPSKIYSGQGQQK 468

Query: 481 WRPRSQRQVL 490
           WRPRSQRQVL
Sbjct: 481 WRPRSQRQVL 468

BLAST of Cla003988 vs. NCBI nr
Match: gi|778701087|ref|XP_011654962.1| (PREDICTED: poly(A) RNA polymerase GLD2 isoform X2 [Cucumis sativus])

HSP 1 Score: 817.8 bits (2111), Expect = 1.0e-233
Identity = 409/489 (83.64%), Postives = 432/489 (88.34%), Query Frame = 1

Query: 1   MNGFMLDRVMKDVLRVVEPLQDDWAARFQIINELRDVVQSIESLRGATVEPFGSFVSNLF 60
           MNG  LDRV+KD+LRVVEPLQDDW ARFQ+INELR+VVQSIESLRGAT+EPFGSFVSNLF
Sbjct: 1   MNGLTLDRVIKDILRVVEPLQDDWTARFQVINELRNVVQSIESLRGATIEPFGSFVSNLF 60

Query: 61  SRWGDLDLSIQLHNGSYISTAGKKHKQSLLKDIQKALRKKGALQLLNTSFLFPHLSLLNL 120
           SRWGDLDLS+QL+NGSY STAGKK KQ+LL+DIQ A RK G                   
Sbjct: 61  SRWGDLDLSVQLNNGSYTSTAGKKRKQTLLRDIQNASRKNGR------------------ 120

Query: 121 GAGGWYKLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDMV 180
               WYKLQLIPHARVPILKIE+IQHNISCDISIDNLVGQ+KSKILLW+NEIDGRFHDMV
Sbjct: 121 ----WYKLQLIPHARVPILKIEHIQHNISCDISIDNLVGQIKSKILLWVNEIDGRFHDMV 180

Query: 181 LLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLKGVR 240
           LLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAI PPLRDIYPGNV DNLKGVR
Sbjct: 181 LLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAIFPPLRDIYPGNVVDNLKGVR 240

Query: 241 AEVESEIARICATNIARFKSRTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTGQWLE 300
           AEVE+EIAR CATNIARFKSRT NRSSLSELFVSFLAKFSDISSKAS LGICPYTGQWL+
Sbjct: 241 AEVENEIARTCATNIARFKSRTANRSSLSELFVSFLAKFSDISSKASELGICPYTGQWLK 300

Query: 301 IESNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSVHQNQSFIL 360
           IESNMRWLPKTYAIFVEDPFEQPENTARAINARQL RISEAFRMTHLRLTSV+QN+S IL
Sbjct: 301 IESNMRWLPKTYAIFVEDPFEQPENTARAINARQLMRISEAFRMTHLRLTSVYQNRSSIL 360

Query: 361 NDLARPQISQFIINPSGSASAPVFNIGNYPPVRPQVHQARATQPCPWFRHQFQNNVPRFN 420
           NDLARPQISQ IIN SGSASAP FN+ NY P+RPQVHQAR  QP PW +HQFQNN+PRFN
Sbjct: 361 NDLARPQISQLIINSSGSASAPAFNVENYTPIRPQVHQARVMQPRPWIQHQFQNNIPRFN 420

Query: 421 MGNFPPINPQDPHAGTTQSRPPVQHKTPKTKRIVSNPNSLKVGEPSTPSKTYNGQGQQKW 480
           MGNFP IN Q PHAGT+QS P VQHKTPKTKRIVS+PN L VGE   PSKTY+GQGQQKW
Sbjct: 421 MGNFPAINSQAPHAGTSQSHPLVQHKTPKTKRIVSSPNVLNVGE---PSKTYSGQGQQKW 464

Query: 481 RPRSQRQVL 490
           RPRSQRQVL
Sbjct: 481 RPRSQRQVL 464

BLAST of Cla003988 vs. NCBI nr
Match: gi|778701081|ref|XP_011654960.1| (PREDICTED: poly(A) RNA polymerase GLD2 isoform X1 [Cucumis sativus])

HSP 1 Score: 813.1 bits (2099), Expect = 2.6e-232
Identity = 409/490 (83.47%), Postives = 432/490 (88.16%), Query Frame = 1

Query: 1   MNGFMLDRVMKDVLRVVEPLQDDWAARFQIINELRDVVQSIESLRGATVEPFGSFVSNLF 60
           MNG  LDRV+KD+LRVVEPLQDDW ARFQ+INELR+VVQSIESLRGAT+EPFGSFVSNLF
Sbjct: 1   MNGLTLDRVIKDILRVVEPLQDDWTARFQVINELRNVVQSIESLRGATIEPFGSFVSNLF 60

Query: 61  SRWGDLDLSIQLHNGSYISTAGKKHKQSLLKDIQKALRKKGALQLLNTSFLFPHLSLLNL 120
           SRWGDLDLS+QL+NGSY STAGKK KQ+LL+DIQ A RK G                   
Sbjct: 61  SRWGDLDLSVQLNNGSYTSTAGKKRKQTLLRDIQNASRKNGR------------------ 120

Query: 121 GAGGWYKLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDMV 180
               WYKLQLIPHARVPILKIE+IQHNISCDISIDNLVGQ+KSKILLW+NEIDGRFHDMV
Sbjct: 121 ----WYKLQLIPHARVPILKIEHIQHNISCDISIDNLVGQIKSKILLWVNEIDGRFHDMV 180

Query: 181 LLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLK-GV 240
           LLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAI PPLRDIYPGNV DNLK GV
Sbjct: 181 LLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAIFPPLRDIYPGNVVDNLKAGV 240

Query: 241 RAEVESEIARICATNIARFKSRTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTGQWL 300
           RAEVE+EIAR CATNIARFKSRT NRSSLSELFVSFLAKFSDISSKAS LGICPYTGQWL
Sbjct: 241 RAEVENEIARTCATNIARFKSRTANRSSLSELFVSFLAKFSDISSKASELGICPYTGQWL 300

Query: 301 EIESNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSVHQNQSFI 360
           +IESNMRWLPKTYAIFVEDPFEQPENTARAINARQL RISEAFRMTHLRLTSV+QN+S I
Sbjct: 301 KIESNMRWLPKTYAIFVEDPFEQPENTARAINARQLMRISEAFRMTHLRLTSVYQNRSSI 360

Query: 361 LNDLARPQISQFIINPSGSASAPVFNIGNYPPVRPQVHQARATQPCPWFRHQFQNNVPRF 420
           LNDLARPQISQ IIN SGSASAP FN+ NY P+RPQVHQAR  QP PW +HQFQNN+PRF
Sbjct: 361 LNDLARPQISQLIINSSGSASAPAFNVENYTPIRPQVHQARVMQPRPWIQHQFQNNIPRF 420

Query: 421 NMGNFPPINPQDPHAGTTQSRPPVQHKTPKTKRIVSNPNSLKVGEPSTPSKTYNGQGQQK 480
           NMGNFP IN Q PHAGT+QS P VQHKTPKTKRIVS+PN L VGE   PSKTY+GQGQQK
Sbjct: 421 NMGNFPAINSQAPHAGTSQSHPLVQHKTPKTKRIVSSPNVLNVGE---PSKTYSGQGQQK 465

Query: 481 WRPRSQRQVL 490
           WRPRSQRQVL
Sbjct: 481 WRPRSQRQVL 465

BLAST of Cla003988 vs. NCBI nr
Match: gi|698567374|ref|XP_009773757.1| (PREDICTED: poly(A) RNA polymerase cid11 [Nicotiana sylvestris])

HSP 1 Score: 503.4 bits (1295), Expect = 4.3e-139
Identity = 274/503 (54.47%), Postives = 340/503 (67.59%), Query Frame = 1

Query: 1   MNGF-MLDRVMKDVLRVVEPLQDDWAARFQIINELRDVVQSIESLRGATVEPFGSFVSNL 60
           MNG+ +L+  ++++LR + PL +DW+ RFQ+I+ELR +V++IESLRGATVEPFGSFVSNL
Sbjct: 1   MNGYSLLEHTLRNILRSINPLDEDWSMRFQLIDELRAMVENIESLRGATVEPFGSFVSNL 60

Query: 61  FSRWGDLDLSIQLHNGSYISTAGKKHKQSLLKDIQKALRKKGALQLLNTSFLFPHLSLLN 120
           F+RWGDLD+SI+L NGSYIS+AGKK+K SLL+D++KAL+ KG                  
Sbjct: 61  FTRWGDLDISIELPNGSYISSAGKKYKLSLLEDVRKALKAKG------------------ 120

Query: 121 LGAGGWYKLQLIPHARVPILKIENIQHNISCDISIDNLVGQMKSKILLWLNEIDGRFHDM 180
               G+ KLQ I +ARVPILK +   +NISCDISI+NL GQMKSKIL W+N IDGRF DM
Sbjct: 121 ----GYRKLQFITNARVPILKFQG-NYNISCDISINNLSGQMKSKILYWINMIDGRFRDM 180

Query: 181 VLLVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAILPPLRDIYPGNVADNLKGV 240
           VLLVKEWAKAH+IN+SK GT NSYSLSLLV+FHFQTC PAILPPL++IYPGN+ D+L GV
Sbjct: 181 VLLVKEWAKAHNINDSKAGTLNSYSLSLLVVFHFQTCVPAILPPLKEIYPGNMVDDLTGV 240

Query: 241 RAEVESEIARICATNIARF---KSRTVNRSSLSELFVSFLAKFSDISSKASVLGICPYTG 300
           RA  E  I   CATNI R    KSR +N+SSLSELF+SF+AKF DISSKAS  GI P+TG
Sbjct: 241 RASAEKFIEETCATNINRLILNKSRAINKSSLSELFISFIAKFCDISSKASAQGISPFTG 300

Query: 301 QWLEIESNMRWLPKTYAIFVEDPFEQPENTARAINARQLTRISEAFRMTHLRLTSVHQNQ 360
           QW +IE NMRWLPKTY IFVEDPFEQP N AR ++++QLTRI+EAFR TH  L S +QNQ
Sbjct: 301 QWEDIEGNMRWLPKTYTIFVEDPFEQPANAARGVSSKQLTRIAEAFRRTHFMLISSNQNQ 360

Query: 361 SFILNDLARPQISQFIINPSGSASAPVFNIGNYP--PVRPQVHQARATQPCPWFRHQF-- 420
           + +++ L +P +S+F+      A  P  N  NY    +RPQV   RA +P    +HQ   
Sbjct: 361 NEVISTLVKPHVSKFV------ARTPAGNQNNYSRNGLRPQVQAQRAIKPPLQVQHQLQA 420

Query: 421 QNNVP---------RFNMGNFPPINPQDPHAGTTQSRPPVQHKTPKTKRIVSNPNSLKVG 480
           Q  +P                PPI  Q          PP Q    + KR+  N NS    
Sbjct: 421 QRAIPPPMRAQHQLHAQRAVLPPIQAQIQLQAQRPVYPPFQAHRLQDKRVDRNQNS---- 470

Query: 481 EPSTPSKTYNGQGQQKWRPRSQR 487
               P++    Q Q  WRP+S R
Sbjct: 481 SAQRPTQANRVQTQPIWRPKSDR 470

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
HESO1_ARATH5.7e-11550.33Protein HESO1 OS=Arabidopsis thaliana GN=HESO1 PE=1 SV=1[more]
GLD2_MOUSE3.8e-1830.33Poly(A) RNA polymerase GLD2 OS=Mus musculus GN=Papd4 PE=1 SV=1[more]
GLD2_RAT1.1e-1729.86Poly(A) RNA polymerase GLD2 OS=Rattus norvegicus GN=Papd4 PE=2 SV=1[more]
GLD2_DANRE1.4e-1731.43Poly(A) RNA polymerase GLD2 OS=Danio rerio GN=papd4 PE=2 SV=1[more]
GLD2_BOVIN2.5e-1728.44Poly(A) RNA polymerase GLD2 OS=Bos taurus GN=PAPD4 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KLX5_CUCSA7.2e-23483.64Uncharacterized protein OS=Cucumis sativus GN=Csa_5G184290 PE=4 SV=1[more]
A0A061FL95_THECC3.9e-13954.13Zinc finger protein, putative OS=Theobroma cacao GN=TCM_042737 PE=4 SV=1[more]
M5XRK4_PRUPE8.2e-13753.98Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005171mg PE=4 SV=1[more]
D7TLN7_VITVI3.1e-13654.81Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g02230 PE=4 SV=... [more]
B9SDZ7_RICCO3.5e-13551.26Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1481410 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659123516|ref|XP_008461706.1|1.1e-24085.07PREDICTED: poly(A) RNA polymerase GLD2 isoform X2 [Cucumis melo][more]
gi|659123512|ref|XP_008461703.1|2.8e-23984.90PREDICTED: poly(A) RNA polymerase GLD2 isoform X1 [Cucumis melo][more]
gi|778701087|ref|XP_011654962.1|1.0e-23383.64PREDICTED: poly(A) RNA polymerase GLD2 isoform X2 [Cucumis sativus][more]
gi|778701081|ref|XP_011654960.1|2.6e-23283.47PREDICTED: poly(A) RNA polymerase GLD2 isoform X1 [Cucumis sativus][more]
gi|698567374|ref|XP_009773757.1|4.3e-13954.47PREDICTED: poly(A) RNA polymerase cid11 [Nicotiana sylvestris][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0071076 RNA 3' uridylation
biological_process GO:0008150 biological_process
biological_process GO:0060964 regulation of gene silencing by miRNA
cellular_component GO:0005575 cellular_component
cellular_component GO:0044424 intracellular part
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0050265 RNA uridylyltransferase activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU09664watermelon EST collection version 2.0transcribed_cluster
WMU50280watermelon EST collection version 2.0transcribed_cluster
WMU70678watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003988Cla003988.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU09664WMU09664transcribed_cluster
WMU50280WMU50280transcribed_cluster
WMU70678WMU70678transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.460.10coord: 23..198
score: 4.0
NoneNo IPR availablePANTHERPTHR12271POLY A POLYMERASE CID PAP -RELATEDcoord: 5..101
score: 3.7E-124coord: 125..403
score: 3.7E
NoneNo IPR availablePANTHERPTHR12271:SF40POLY(A) RNA POLYMERASE GLD2coord: 125..403
score: 3.7E-124coord: 5..101
score: 3.7E
NoneNo IPR availableunknownSSF81301Nucleotidyltransferasecoord: 109..168
score: 7.19E-23coord: 6..80
score: 7.19
NoneNo IPR availableunknownSSF81631PAP/OAS1 substrate-binding domaincoord: 175..356
score: 4.71

The following gene(s) are paralogous to this gene:

None