Cla003926 (gene) Watermelon (97103) v1

Overview
NameCla003926
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionB3 domain-containing protein At1g05920 (AHRD V1 *-*- Y1592_ARATH); contains Interpro domain(s) IPR005508 Protein of unknown function DUF313
LocationChr1 : 6410965 .. 6411699 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATGGGGACAGCAGTTGAAGGCTTCAGAATGGGTCTTGATTTTCCTGATTTAAACGAAATTTACATACCTCGGAGAAGAAGGGGATCTTCCGGCACCGGAAAGAAAGAACAACCCAAAACTGAAACCAAACTCCCCTTGACTATGTTGGAGGCTGCGGCTATTCTAATAGAGATGGCGAACTCTGTTTCTGATTTTGAACCGAAAAAATTTAACAGCCACAAAAGAAAGAAGCCTCCGACGCCGACGAAGAAACAGAGGAAGAAGAAGGTAAAACAGAGTGAGTATCCGTCGATTCCTGAGATGCCGGCCGCAATGAGAGATCGGATTGTAGAGATGGGTGGGTATGAAATTAGATTGGTGATTCAAAAACAACTCCAAGACACGGATTTAAACAAGAACCATGGTCGTTTATCCCTACCGGCAAAGAAACTGTTGTTCGATTTTGCAACAGAGGAGGAGAGGAAGTTGCTGAGCGAACAAGAGAACAAGAACAAAAAGGGGATGAATGTAATGATTGTGGATGATGTTCTTCAAGAAAGAATGATTTGTTTGAAGAAGTGGAAGATTGGAAGTGGGGATGTATATTGTTTGATGACACAGTGGAATTCGTTTGTGGAAGAAACGGGATTGAAAAGTGGGCAACATATTCAACTTTGGTGCTTCAGAAAAAATGATGAACTCGAGGCATCTCGCCTATGCTTCGCTATGGTTAAGTTAGCACCTTGCTAA

mRNA sequence

ATGGGAATGGGGACAGCAGTTGAAGGCTTCAGAATGGGTCTTGATTTTCCTGATTTAAACGAAATTTACATACCTCGGAGAAGAAGGGGATCTTCCGGCACCGGAAAGAAAGAACAACCCAAAACTGAAACCAAACTCCCCTTGACTATGTTGGAGGCTGCGGCTATTCTAATAGAGATGGCGAACTCTGTTTCTGATTTTGAACCGAAAAAATTTAACAGCCACAAAAGAAAGAAGCCTCCGACGCCGACGAAGAAACAGAGGAAGAAGAAGGTAAAACAGAGTGAGTATCCGTCGATTCCTGAGATGCCGGCCGCAATGAGAGATCGGATTGTAGAGATGGGTGGGTATGAAATTAGATTGGTGATTCAAAAACAACTCCAAGACACGGATTTAAACAAGAACCATGGTCGTTTATCCCTACCGGCAAAGAAACTGTTGTTCGATTTTGCAACAGAGGAGGAGAGGAAGTTGCTGAGCGAACAAGAGAACAAGAACAAAAAGGGGATGAATGTAATGATTGTGGATGATGTTCTTCAAGAAAGAATGATTTGTTTGAAGAAGTGGAAGATTGGAAGTGGGGATGTATATTGTTTGATGACACAGTGGAATTCGTTTGTGGAAGAAACGGGATTGAAAAGTGGGCAACATATTCAACTTTGGTGCTTCAGAAAAAATGATGAACTCGAGGCATCTCGCCTATGCTTCGCTATGGTTAAGTTAGCACCTTGCTAA

Coding sequence (CDS)

ATGGGAATGGGGACAGCAGTTGAAGGCTTCAGAATGGGTCTTGATTTTCCTGATTTAAACGAAATTTACATACCTCGGAGAAGAAGGGGATCTTCCGGCACCGGAAAGAAAGAACAACCCAAAACTGAAACCAAACTCCCCTTGACTATGTTGGAGGCTGCGGCTATTCTAATAGAGATGGCGAACTCTGTTTCTGATTTTGAACCGAAAAAATTTAACAGCCACAAAAGAAAGAAGCCTCCGACGCCGACGAAGAAACAGAGGAAGAAGAAGGTAAAACAGAGTGAGTATCCGTCGATTCCTGAGATGCCGGCCGCAATGAGAGATCGGATTGTAGAGATGGGTGGGTATGAAATTAGATTGGTGATTCAAAAACAACTCCAAGACACGGATTTAAACAAGAACCATGGTCGTTTATCCCTACCGGCAAAGAAACTGTTGTTCGATTTTGCAACAGAGGAGGAGAGGAAGTTGCTGAGCGAACAAGAGAACAAGAACAAAAAGGGGATGAATGTAATGATTGTGGATGATGTTCTTCAAGAAAGAATGATTTGTTTGAAGAAGTGGAAGATTGGAAGTGGGGATGTATATTGTTTGATGACACAGTGGAATTCGTTTGTGGAAGAAACGGGATTGAAAAGTGGGCAACATATTCAACTTTGGTGCTTCAGAAAAAATGATGAACTCGAGGCATCTCGCCTATGCTTCGCTATGGTTAAGTTAGCACCTTGCTAA

Protein sequence

MGMGTAVEGFRMGLDFPDLNEIYIPRRRRGSSGTGKKEQPKTETKLPLTMLEAAAILIEMANSVSDFEPKKFNSHKRKKPPTPTKKQRKKKVKQSEYPSIPEMPAAMRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEERKLLSEQENKNKKGMNVMIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFAMVKLAPC
Homology
[Close]
BLAST of Cla003926 vs. Swiss-Prot
Match: Y1592_ARATH (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.1e-13
Identity = 54/163 (33.13%), Postives = 80/163 (49.08%), Query Frame = 1 

Query: 88  RKKKVKQSEY--PSIPEMPAAMRDRIVEMGGY-EIRLVIQKQLQDTDLNKNHGRLSLPAK 147
           R+KK    E+  P  P+ P  +   +  M G  + +L+I+K L   D++    RLS+P  
Sbjct: 146 RRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNRLSIPIN 205

Query: 148 KLL-FDFATEEERKLLSEQE--NKNKKGMNVMIVDDVLQERMICLKKW--KIGSGDVY-- 207
            ++  DF T +E +L+ E E  N+   G+   +VD   ++  +  K+W     SG  Y  
Sbjct: 206 TVIQNDFLTLDESRLIDEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSSYWS 265

Query: 208 -CLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFAMV 240
             L  +W++ VE  GLK G  I LW FR ND      LCFA+V
Sbjct: 266 FVLRGEWSNVVETNGLKEGDKISLWSFRSND-----ILCFALV 303

[Close]
BLAST of Cla003926 vs. Swiss-Prot
Match: Y3485_ARATH (Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana GN=At3g24850 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.1e-13
Identity = 58/177 (32.77%), Postives = 81/177 (45.76%), Query Frame = 1 

Query: 74  SHKRKKPPTPTKKQRKKKVKQSEYPSIPE-----MPAAMRDRIVEMGGYEIRLVIQKQLQ 133
           S KR+      +    KK K + +P         +   MRD        + +L+ +K L 
Sbjct: 179 SRKRRAVEERKRTGGFKKAKVAPFPGTARDTPKWLVKVMRDM---KEAKDAKLIFEKTLF 238

Query: 134 DTDLNKNHGRLSLPAKKLLF-DFATEEERKLLSEQENKNKK-GMNVMIVDDVLQERMICL 193
            TD+N    RLS+P   LL  DF T  E +++ E  N NKK G+  ++VD    +  + L
Sbjct: 239 VTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQRSVKWGVML 298

Query: 194 KKWKI----GSGD-VYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFAM 239
           K+W++    G G   Y L+  WN  VE  GLK G +I +W FR         LCFAM
Sbjct: 299 KRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRCR-----GVLCFAM 347

[Close]
BLAST of Cla003926 vs. Swiss-Prot
Match: Y2142_ARATH (B3 domain-containing protein At2g31420 OS=Arabidopsis thaliana GN=At2g31420 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.5e-12
Identity = 51/171 (29.82%), Postives = 86/171 (50.29%), Query Frame = 1 

Query: 81  PTPTKKQRKKKVKQSEYPSIPEMPAAMRDRIVEM----GGYEIRLVIQKQ-LQDTDLNKN 140
           P+P+++ +   V      S     +++ D +V++     GY+ +L+I+++ L  TDL KN
Sbjct: 34  PSPSQQNKSDIVSLCPADSPETCNSSIPDWLVKVMRKENGYDPKLIIKRRVLCTTDLRKN 93

Query: 141 HGRLSLPAKKL-LFDFATEEERKLLSEQENK-NKKGMNVMIVDDVLQERMICLKKWKIGS 200
            G LS+   KL   DF TE+E + L E   K  + G+ V +VD    + ++ LKKW   +
Sbjct: 94  QGCLSMHLSKLEKSDFLTEDETRFLDEDFLKAKRDGLKVFLVDPESDKHVVYLKKWNGNT 153

Query: 201 GDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFAMVKLAPC 245
              Y L   WN+ +++   K    I++W FR      + +LCFA+     C
Sbjct: 154 VWKYVLSHGWNNVIDKKIFKVNDVIEIWSFRDG----SGKLCFALSSPTRC 200

[Close]
BLAST of Cla003926 vs. Swiss-Prot
Match: Y2741_ARATH (Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana GN=At2g27410 PE=3 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 5.9e-12
Identity = 52/171 (30.41%), Postives = 80/171 (46.78%), Query Frame = 1 

Query: 76  KRKKPPTPTKKQRKKK--VKQSEYPSIPEMPAAMRDRIV--EMGGYEIRLVIQKQLQDTD 135
           K K+P    K+  KK+  +   E   I   P      ++  E  GY  +L+  +QL  TD
Sbjct: 39  KEKRPINVEKRSHKKRKIICPLEEEPIQTTPPEWLLNVMRREENGYNPKLISTRQLYKTD 98

Query: 136 LNKNHGRLSLPAKKLLF-DFATEEERKLLSEQENK-NKKGMNVMIVDDVLQERMICLKKW 195
           L K   RLS+P K++   DF TE+E +++ E   K    G+ V  VD  L + ++ L+KW
Sbjct: 99  LKKTEARLSVPFKQVKTPDFLTEDETRIIHENAMKIRDNGVPVNFVDPELNKHVLELRKW 158

Query: 196 KIGSGDVYCLMTQWNSFVE--ETGLKSGQHIQLWCFRKNDELEASRLCFAM 239
           K+    +Y  +  W + ++  +T  K      LW FR        +LCFA+
Sbjct: 159 KMKGNWIYVFVKGWKNVLDACKTLFKEDDVYPLWSFRSG----TGKLCFAL 205

[Close]
BLAST of Cla003926 vs. Swiss-Prot
Match: Y2467_ARATH (B3 domain-containing protein At2g24670 OS=Arabidopsis thaliana GN=At2g24670 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.2e-10
Identity = 53/206 (25.73%), Postives = 104/206 (50.49%), Query Frame = 1 

Query: 47  PLTMLEAAAILIEMANSVSDFEPKKFNSHKRKKPPTPTKKQRK-KKVKQSEYPSIPEM-- 106
           P T++E+ + + +  +S+ +   ++  +     P +P  +QRK KK K+S   S  +   
Sbjct: 50  PSTVMESKSHIHD--HSLRESPTRRSRNRHDLPPMSPPMEQRKSKKAKRSTDASSSKTRE 109

Query: 107 --PAAMRDRIVEMGGYEI----RLVIQKQLQDTDLNKNHGRLSLPAKKLL-FDFATEEER 166
             P  +   +    G ++    + +I K+L  TD++ +  RLS+P  +++  +F   EE+
Sbjct: 110 PTPGWLISLMRSKNGGDVEDNSKKIIDKELFQTDVDPHQSRLSIPVSQIVELEFLNHEEK 169

Query: 167 KLLSEQENK-NKKGMNVMIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLKSG 226
           + + E  N+  K+G++ ++VD  L+E  + L+   +    +Y L+  WN  V +  L+  
Sbjct: 170 RAIEEDANRVRKEGVDAILVDSHLREFPVNLRLRDMRGILLYNLVAGWNQVVTDCLLEEN 229

Query: 227 QHIQLWCFRKNDELEASRLCFAMVKL 242
            +I+LW F  +D      L FA+V L
Sbjct: 230 TNIRLWSFHADD-----TLYFALVPL 248

[Close]
BLAST of Cla003926 vs. TrEMBL
Match: A0A0A0KP87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.3e-86
Identity = 176/268 (65.67%), Postives = 200/268 (74.63%), Query Frame = 1 

Query: 1   MGMGTAVE-GFRMGLDFPDLNEIYIPRRRRGSS-GTGKKEQPKTETKLPLTMLEAAAILI 60
           M M T+V  G R+ L  PDLN +Y+PR+RRGSS G GKKEQ  TET+LPL+M EAA+ILI
Sbjct: 1   MVMETSVRCGLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILI 60

Query: 61  EMANSVSDFEPKKFN-SHKRKKPPTPT---------------------KKQRKKKVKQSE 120
           ++ANSV D  P+K N + KRK PPT T                     KKQRK  V QSE
Sbjct: 61  QLANSVPDVPPQKINKTRKRKNPPTQTEASTSRTKQQRKKNVASTSRTKKQRKMNVDQSE 120

Query: 121 YPSIPEMPAAMRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEER 180
            PS   MP AMRDRI+EMGGYEI LVIQKQL DTDLNKNHGRLS+  K+L FDFATEEE 
Sbjct: 121 RPS---MPVAMRDRILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEES 180

Query: 181 KLLSEQENKNKKGMNVMIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLKSGQ 240
           KLLSEQENKNK G+NVMI+DDVL+ERM+CLKKWKIGSG VYCLMT+WN  VEE GLKSG+
Sbjct: 181 KLLSEQENKNKMGINVMILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGE 240

Query: 241 HIQLWCFRKNDELEASRLCFAMVKLAPC 245
            IQ+W FRK+DE EA RLC A+VKLA C
Sbjct: 241 EIQVWSFRKDDEDEAHRLCLALVKLATC 265

[Close]
BLAST of Cla003926 vs. TrEMBL
Match: A0A0A0KUX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 5.3e-84
Identity = 170/248 (68.55%), Postives = 194/248 (78.23%), Query Frame = 1 

Query: 3   MGTAVE-GFRMGLDFPDLNEIYIPRRRRGSS-GTGKKEQPKTETKLPLTMLEAAAILIEM 62
           M T+V  G R+ L  PDLN +Y+PR+RRGSS G GKKEQ  TET+LPL+M EAA+ILI++
Sbjct: 1   METSVRCGLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILIQL 60

Query: 63  ANSVSDFEPKKFN-SHKRKKPPTPT-------KKQRKKKVKQSEYPSIPEMPAAMRDRIV 122
           ANSV D   +K N + KRK PPT T       KKQRK  V QSE PS   MP AMRDRI+
Sbjct: 61  ANSVPDVPLQKINKTRKRKNPPTQTEASTSRTKKQRKMNVDQSERPS---MPVAMRDRIL 120

Query: 123 EMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEERKLLSEQENKNKKGMNV 182
           EMGGYEI LVIQKQL DTDLNKNHGRLS+  K+L FDFATEEE KLLSEQENKNK G+NV
Sbjct: 121 EMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGINV 180

Query: 183 MIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEAS 241
           M +DDVL+ERM+CLKKWKIGSG VYCLMT+WN  VEE GLKSG+ IQ+W FRK+DE EA 
Sbjct: 181 MTLDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDEAH 240

[Close]
BLAST of Cla003926 vs. TrEMBL
Match: A0A0A0KSY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.0e-79
Identity = 166/267 (62.17%), Postives = 194/267 (72.66%), Query Frame = 1 

Query: 1   MGMGTAVEG-FRMGLDFPDLNEIYIPRRRRGSS-GTGKKEQPKTETKLPLTMLEAAAILI 60
           M M T V G  R+      LN IYIPR+RRGSS G GK++Q  TET+LPL+M+EAA+ILI
Sbjct: 1   MTMDTTVHGGLRICHLHSHLNNIYIPRKRRGSSSGAGKEQQYITETELPLSMVEAASILI 60

Query: 61  EMANSVS--DFEPKKFN----------------SHKRKKPPTPT-------KKQRKKKVK 120
           E+ANSV   D + +KFN                +HKRK PP PT       KKQRKK V 
Sbjct: 61  ELANSVPVPDVQRQKFNKTANSVPDVERQKLNKTHKRKNPPIPTEASTSKTKKQRKKNVN 120

Query: 121 QSEYPSIPEMPAAMRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATE 180
           + E+P    MP  MRDRI+EMGGYEIRLVIQK+L DTDLNKNHGR S+  K L FDFATE
Sbjct: 121 KREHPP---MPVTMRDRILEMGGYEIRLVIQKELTDTDLNKNHGRFSMNTKLLSFDFATE 180

Query: 181 EERKLLSEQENKNKKGMNVMIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLK 240
           EE KLLSEQENKNKKG+NVMI+DD L+ER++CLKKWKIGSG+VYCLMTQWN  VE+ G K
Sbjct: 181 EESKLLSEQENKNKKGINVMILDDALEERILCLKKWKIGSGEVYCLMTQWNLMVEKRGFK 240

[Close]
BLAST of Cla003926 vs. TrEMBL
Match: A0A0A0LRL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365090 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.2e-53
Identity = 120/232 (51.72%), Postives = 156/232 (67.24%), Query Frame = 1 

Query: 22  IYIPRRRRGSSGTGKKEQPKTETKLPLTMLEAAAILIEMANSVSDFEPKKFNS--HKRKK 81
           +++PRR+R  S   KKE         ++M+EAA ILI MAN       KK +    + KK
Sbjct: 21  VHVPRRKRSGSVESKKEDDGAS----ISMVEAAKILIAMANDGFCKRKKKESPTVKQSKK 80

Query: 82  PPT-------PTKKQRKKKVKQSEYPSIPEMPAAMRDRIVEMGGYEIRLVIQKQLQDTDL 141
            PT       PT KQ+KK ++  E  S PEMPA+MRDR+V  GGYEI+LVIQKQL+++D+
Sbjct: 81  SPTAKKRKTSPTAKQKKKSMELEE--SFPEMPASMRDRVVGKGGYEIQLVIQKQLEESDV 140

Query: 142 NKNHGRLSLPAKKLLFDFATEEERKLLSEQ---ENKNKKGMNVMIVDDVLQERMICLKKW 201
           ++NHGRL LPAKK+  +F  EEER +L E+   + KNKKG+ V ++DD L+E  +CLKKW
Sbjct: 141 SRNHGRLCLPAKKVKTEFVREEERNILEEENDGKKKNKKGLEVGVMDDSLRESSMCLKKW 200

Query: 202 KIGSGDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFAMVKL 242
           KIGSG  YCLM  WN FVEE GL+SG +IQLW FR N    + +LCFA+VKL
Sbjct: 201 KIGSGKFYCLMKNWNCFVEENGLRSGDYIQLWSFRNN---ISDKLCFAIVKL 243

[Close]
BLAST of Cla003926 vs. TrEMBL
Match: A0A0A0KPD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.4e-52
Identity = 102/133 (76.69%), Postives = 116/133 (87.22%), Query Frame = 1 

Query: 112 VEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEERKLLSEQENKNKKGMN 171
           +EM GYEI LVIQKQL DTDLNKNHGRLS+  K+L FDFATEEE KLLSEQENKNK G+N
Sbjct: 3   LEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGIN 62

Query: 172 VMIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEA 231
           VM++DDVL+ERM+CLKKWKIGSG+VYCLMT+WN  VEE GLKSG+ IQ+W FRK+DE EA
Sbjct: 63  VMLLDDVLEERMLCLKKWKIGSGEVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDEA 122

Query: 232 SRLCFAMVKLAPC 245
            RLC A+VKLA C
Sbjct: 123 HRLCLALVKLATC 135

[Close]
BLAST of Cla003926 vs. NCBI nr
Match: gi|778703844|ref|XP_011655441.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus])

HSP 1 Score: 326.2 bits (835), Expect = 4.7e-86
Identity = 176/268 (65.67%), Postives = 200/268 (74.63%), Query Frame = 1 

Query: 1   MGMGTAVE-GFRMGLDFPDLNEIYIPRRRRGSS-GTGKKEQPKTETKLPLTMLEAAAILI 60
           M M T+V  G R+ L  PDLN +Y+PR+RRGSS G GKKEQ  TET+LPL+M EAA+ILI
Sbjct: 1   MVMETSVRCGLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILI 60

Query: 61  EMANSVSDFEPKKFN-SHKRKKPPTPT---------------------KKQRKKKVKQSE 120
           ++ANSV D  P+K N + KRK PPT T                     KKQRK  V QSE
Sbjct: 61  QLANSVPDVPPQKINKTRKRKNPPTQTEASTSRTKQQRKKNVASTSRTKKQRKMNVDQSE 120

Query: 121 YPSIPEMPAAMRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEER 180
            PS   MP AMRDRI+EMGGYEI LVIQKQL DTDLNKNHGRLS+  K+L FDFATEEE 
Sbjct: 121 RPS---MPVAMRDRILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEES 180

Query: 181 KLLSEQENKNKKGMNVMIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLKSGQ 240
           KLLSEQENKNK G+NVMI+DDVL+ERM+CLKKWKIGSG VYCLMT+WN  VEE GLKSG+
Sbjct: 181 KLLSEQENKNKMGINVMILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGE 240

Query: 241 HIQLWCFRKNDELEASRLCFAMVKLAPC 245
            IQ+W FRK+DE EA RLC A+VKLA C
Sbjct: 241 EIQVWSFRKDDEDEAHRLCLALVKLATC 265

[Close]
BLAST of Cla003926 vs. NCBI nr
Match: gi|700196319|gb|KGN51496.1| (hypothetical protein Csa_5G570410 [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 7.5e-84
Identity = 170/248 (68.55%), Postives = 194/248 (78.23%), Query Frame = 1 

Query: 3   MGTAVE-GFRMGLDFPDLNEIYIPRRRRGSS-GTGKKEQPKTETKLPLTMLEAAAILIEM 62
           M T+V  G R+ L  PDLN +Y+PR+RRGSS G GKKEQ  TET+LPL+M EAA+ILI++
Sbjct: 1   METSVRCGLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILIQL 60

Query: 63  ANSVSDFEPKKFN-SHKRKKPPTPT-------KKQRKKKVKQSEYPSIPEMPAAMRDRIV 122
           ANSV D   +K N + KRK PPT T       KKQRK  V QSE PS   MP AMRDRI+
Sbjct: 61  ANSVPDVPLQKINKTRKRKNPPTQTEASTSRTKKQRKMNVDQSERPS---MPVAMRDRIL 120

Query: 123 EMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEERKLLSEQENKNKKGMNV 182
           EMGGYEI LVIQKQL DTDLNKNHGRLS+  K+L FDFATEEE KLLSEQENKNK G+NV
Sbjct: 121 EMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGINV 180

Query: 183 MIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEAS 241
           M +DDVL+ERM+CLKKWKIGSG VYCLMT+WN  VEE GLKSG+ IQ+W FRK+DE EA 
Sbjct: 181 MTLDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDEAH 240

[Close]
BLAST of Cla003926 vs. NCBI nr
Match: gi|659072764|ref|XP_008467039.1| (PREDICTED: putative B3 domain-containing protein At2g27410 [Cucumis melo])

HSP 1 Score: 318.2 bits (814), Expect = 1.3e-83
Identity = 169/244 (69.26%), Postives = 196/244 (80.33%), Query Frame = 1 

Query: 6   AVEGFRMGLDFPDLNEIYIPRRRRGSSGTGKKEQPKTETKLPLTMLEAAAILIEMANSVS 65
           AVEGFRM +     N+ Y+P+RRR S     KEQ   +T LP++M EAA +LIEMANSV 
Sbjct: 6   AVEGFRMNVH--SFNQFYVPQRRR-SFRVEIKEQSNPQTHLPISMSEAADVLIEMANSVP 65

Query: 66  DFEPKKFN-SHKRKKPP---TPTKKQR-KKKVKQSEYPSIPEMPAAMRDRIVEMGGYEIR 125
           + EP++ N +HKRK PP   T  KKQR KKKV+QSEYPSIPEMP  MRDRI EMGGYEI 
Sbjct: 66  NVEPQQINKTHKRKNPPRTNTAIKKQRRKKKVEQSEYPSIPEMPTTMRDRIEEMGGYEIN 125

Query: 126 LVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEERKLLSEQENKNKKGMNVMIVDDVLQ 185
           LVIQKQL DTDLNKN GRLS+P KKL FDF TEEER LLS+QENKNKKG+NVMI++++++
Sbjct: 126 LVIQKQLTDTDLNKNEGRLSMPKKKLAFDFTTEEERNLLSQQENKNKKGINVMIMNNMVE 185

Query: 186 E-RMICLKKWKIGS--GDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFA 242
           + R ICLKKWKIGS  GDVYCLMTQWN+FVEETGLKSGQHIQLWCFRK+ E E  RLCFA
Sbjct: 186 DIRSICLKKWKIGSGNGDVYCLMTQWNAFVEETGLKSGQHIQLWCFRKDYEFEPPRLCFA 245

[Close]
BLAST of Cla003926 vs. NCBI nr
Match: gi|700196320|gb|KGN51497.1| (hypothetical protein Csa_5G570420 [Cucumis sativus])

HSP 1 Score: 303.1 bits (775), Expect = 4.3e-79
Identity = 166/267 (62.17%), Postives = 194/267 (72.66%), Query Frame = 1 

Query: 1   MGMGTAVEG-FRMGLDFPDLNEIYIPRRRRGSS-GTGKKEQPKTETKLPLTMLEAAAILI 60
           M M T V G  R+      LN IYIPR+RRGSS G GK++Q  TET+LPL+M+EAA+ILI
Sbjct: 1   MTMDTTVHGGLRICHLHSHLNNIYIPRKRRGSSSGAGKEQQYITETELPLSMVEAASILI 60

Query: 61  EMANSVS--DFEPKKFN----------------SHKRKKPPTPT-------KKQRKKKVK 120
           E+ANSV   D + +KFN                +HKRK PP PT       KKQRKK V 
Sbjct: 61  ELANSVPVPDVQRQKFNKTANSVPDVERQKLNKTHKRKNPPIPTEASTSKTKKQRKKNVN 120

Query: 121 QSEYPSIPEMPAAMRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATE 180
           + E+P    MP  MRDRI+EMGGYEIRLVIQK+L DTDLNKNHGR S+  K L FDFATE
Sbjct: 121 KREHPP---MPVTMRDRILEMGGYEIRLVIQKELTDTDLNKNHGRFSMNTKLLSFDFATE 180

Query: 181 EERKLLSEQENKNKKGMNVMIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLK 240
           EE KLLSEQENKNKKG+NVMI+DD L+ER++CLKKWKIGSG+VYCLMTQWN  VE+ G K
Sbjct: 181 EESKLLSEQENKNKKGINVMILDDALEERILCLKKWKIGSGEVYCLMTQWNLMVEKRGFK 240

[Close]
BLAST of Cla003926 vs. NCBI nr
Match: gi|659072862|ref|XP_008467133.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo])

HSP 1 Score: 255.8 bits (652), Expect = 7.8e-65
Identity = 126/173 (72.83%), Postives = 143/173 (82.66%), Query Frame = 1 

Query: 72  FNSHKRKKPPTPTKKQRKKKVKQSEYPSIPEMPAAMRDRIVEMGGYEIRLVIQKQLQDTD 131
           F   K     + TKKQRKK VKQ E+PS   MP AMRDRI+EMGGYEIRLVIQKQL DTD
Sbjct: 18  FLGEKNLASTSRTKKQRKKYVKQIEHPS---MPVAMRDRILEMGGYEIRLVIQKQLTDTD 77

Query: 132 LNKNHGRLSLPAKKLLFDFATEEERKLLSEQENKNKKGMNVMIVDDVLQERMICLKKWKI 191
           LNKNHGRLS+  K+L FDFATEEE KLLSEQENKNK+G+NVM++DDVL+ERM+CLKKWKI
Sbjct: 78  LNKNHGRLSMNTKQLSFDFATEEETKLLSEQENKNKRGINVMMLDDVLEERMLCLKKWKI 137

Query: 192 GSGDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFAMVKLAPC 245
           GSG+VYCLMT+WN  VEE G K G+ IQ+W FRK+DE EA RLCFA+VKLA C
Sbjct: 138 GSGEVYCLMTRWNLMVEERGFKGGEEIQVWSFRKDDEYEAHRLCFALVKLATC 187

The following BLAST results are available for this feature:
BLAST of Cla003926 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y1592_ARATH4.1e-1333.13B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana GN=At1g05920 PE=2... [more]
Y3485_ARATH9.1e-1332.77Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana GN=At3g2... [more]
Y2142_ARATH3.5e-1229.82B3 domain-containing protein At2g31420 OS=Arabidopsis thaliana GN=At2g31420 PE=3... [more]
Y2741_ARATH5.9e-1230.41Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana GN=At2g2... [more]
Y2467_ARATH7.2e-1025.73B3 domain-containing protein At2g24670 OS=Arabidopsis thaliana GN=At2g24670 PE=2... [more]
BLAST of Cla003926 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KP87_CUCSA3.3e-8665.67Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1[more]
A0A0A0KUX9_CUCSA5.3e-8468.55Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1[more]
A0A0A0KSY8_CUCSA3.0e-7962.17Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1[more]
A0A0A0LRL4_CUCSA2.2e-5351.72Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365090 PE=4 SV=1[more]
A0A0A0KPD7_CUCSA2.4e-5276.69Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1[more]
BLAST of Cla003926 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778703844|ref|XP_011655441.1|4.7e-8665.67PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus][more]
gi|700196319|gb|KGN51496.1|7.5e-8468.55hypothetical protein Csa_5G570410 [Cucumis sativus][more]
gi|659072764|ref|XP_008467039.1|1.3e-8369.26PREDICTED: putative B3 domain-containing protein At2g27410 [Cucumis melo][more]
gi|700196320|gb|KGN51497.1|4.3e-7962.17hypothetical protein Csa_5G570420 [Cucumis sativus][more]
gi|659072862|ref|XP_008467133.1|7.8e-6572.83PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005508DUF313
IPR015300DNA-bd_pseudobarrel_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006457 protein folding
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU16740watermelon unigene v2 vs TrEMBLtranscribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003926Cla003926.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU16740WMU16740transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005508B3 domain-containing proteinPFAMPF03754DUF313coord: 102..208
score: 3.1
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 120..227
score: 2.
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 122..226
score: 3.53
NoneNo IPR availablePANTHERPTHR31541FAMILY NOT NAMEDcoord: 68..243
score: 1.2
NoneNo IPR availablePANTHERPTHR31541:SF22SUBFAMILY NOT NAMEDcoord: 68..243
score: 1.2