Cla003879 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla003879
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Fanconi-associated nuclease 1 homolog (AHRD V1 ***- FAN1_ORYSJ)
Location	Chr8 : 4315186 .. 4316874 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGAGTATTGTGGTTTCCAGATGCATGCTTATCTAGGGGAACGAAGCGGAAGTTGACTCAAAGCACTCTTCTTCAACTAAACTTCTACTCCCGATCAAAAGTTCAACATCAATCTCATGTTCTGAAATCAGAGAAAAATGAGTGTTCTGTGGGTCCCGGTGCTGGCCTTATGCACAATACTGTCCGTAAATTTCCTGAAGATGCATCTTGTATTGAAAATGACGAAATTATATGTGAATCGTTAGTAGAATGTGCAATGCAGCCACAAAAGGACTGTTTATTGGATACCCTAAATAACTGTGAAAGAGCTAATGATGCTTCAGAAATTTGTTCTCAGAAAAAAAGAATTACATCTGGGAAGGCACCAGCCAAGGATGATTTATCTGGGATGATTCTTCAAACTTTTATTGTCGGTCGTAAGTATAGTGATAAAAAGGAGTTAAGTCTTGGGGAAAGCATCTCTCTTGAAAGAGATCCTACCAACGGAAAGGATCCCAATGCCATCAAGGTATGATTCTTCTGCCATTTCCCTCTTAAATTAGTGCGGGAAATGTATAACCTCTAATTTACTTGCGTAATAGAAACTTTATGGAGATTGGCTACTTAAATGCGGAAGTGTTTGTGTTTTCTAATCGTAAACCTATAATGGTATTAACTGCTGTAATAATGCAATCCTAAAATAACCCAAAGTATTGGCATACCATAACACACTTGAGCAGGGAAACAATGAACTACCGAACCTTGAGAACTCCTATCAGGAAATTTGGGAAATCAAACTCCTGACTGCTGGAAACTTACCGAGTATCTATGTTTCCCCACATATATATGCAGACATCGTCCATTCTAACTCCGAGCGCATTAAAAATGTTGTTATAGTGAACTTTTGATCATTATATTAGCTAATCTTTGACTGTTTGAACATAAGGTATTGCAACTGTAGCCTCAAATATAGATTATGACATTATCGTGAACAAGCCATGGGTATGGGAACATGCAAGATGACACATGACGGGCCAACAGCTACCTAAGGTTAGAGTTCCAAGAAAGTGTTTATCCCATAAGGCAAATGACTCTTCCTTACTTTCGATGCATTAAAATGTTTGAAAATGTAATATAGGGTGGATCATTTTAACTCTCCATTGTCATGGGGTCGGCGCCTGAGTTTCTTGTCGTATGTAACGTGCCATGATGTGAACAATAGACAAGTTGTTTTTTGATAGCAGCTAGAACTATTTGGTAGTGTTTGCAAGTTTAACACTATTGCAGTTTCTTCTACCTACTTGATGGTTTGTATAGGGTGTAGCCTCTGTGCGAGTACAAACTGTCTAGTCCATGTAAAAAGTAGTATTGCTGTCAAAACATCTCAAAGAACCTTTGTTTCTAATTTGAGTTGTTTCATTAGTAGGTTTCTTTTTTATTTTTTATTTTTTTATTTTTTTATTTTTTAAATTCTTTTATTATTATTTTTATGGGATAAGAAACATTCAATTGATGAATGAAATAAAGGGGAAAGCCCAATGCCAATAATAGCACCAAGACTAGGTTCCCACATAAACTTTTTTTTTTATTTTCTTTGGATAAGGATCCTTCGGATCTTTCAAGAGAGAGTTCACAATACCCACCAACCCCAAGTGGCCATAAGGGATTTAACAATGAATGCCATAGAAGGATCAAGAGGCCATGA

mRNA sequence

ATGTCTGGAGTATTGTGGTTTCCAGATGCATGCTTATCTAGGGGAACGAAGCGGAAGTTGACTCAAAGCACTCTTCTTCAACTAAACTTCTACTCCCGATCAAAAGTTCAACATCAATCTCATGTTCTGAAATCAGAGAAAAATGAGTGTTCTGTGGGTCCCGGTGCTGGCCTTATGCACAATACTGTCCGTAAATTTCCTGAAGATGCATCTTGTATTGAAAATGACGAAATTATATGTGAATCGTTAGTAGAATGTGCAATGCAGCCACAAAAGGACTGTTTATTGGATACCCTAAATAACTGTGAAAGAGCTAATGATGCTTCAGAAATTTGTTCTCAGAAAAAAAGAATTACATCTGGGAAGGCACCAGCCAAGGATGATTTATCTGGGATGATTCTTCAAACTTTTATTGTCGGTCGTAAGTATAGTGATAAAAAGGAGTTAAGTCTTGGGGAAAGCATCTCTCTTGAAAGAGATCCTACCAACGGAAAGGATCCCAATGCCATCAAGGATCCTTCGGATCTTTCAAGAGAGAGTTCACAATACCCACCAACCCCAAGTGGCCATAAGGGATTTAACAATGAATGCCATAGAAGGATCAAGAGGCCATGA

Coding sequence (CDS)

ATGTCTGGAGTATTGTGGTTTCCAGATGCATGCTTATCTAGGGGAACGAAGCGGAAGTTGACTCAAAGCACTCTTCTTCAACTAAACTTCTACTCCCGATCAAAAGTTCAACATCAATCTCATGTTCTGAAATCAGAGAAAAATGAGTGTTCTGTGGGTCCCGGTGCTGGCCTTATGCACAATACTGTCCGTAAATTTCCTGAAGATGCATCTTGTATTGAAAATGACGAAATTATATGTGAATCGTTAGTAGAATGTGCAATGCAGCCACAAAAGGACTGTTTATTGGATACCCTAAATAACTGTGAAAGAGCTAATGATGCTTCAGAAATTTGTTCTCAGAAAAAAAGAATTACATCTGGGAAGGCACCAGCCAAGGATGATTTATCTGGGATGATTCTTCAAACTTTTATTGTCGGTCGTAAGTATAGTGATAAAAAGGAGTTAAGTCTTGGGGAAAGCATCTCTCTTGAAAGAGATCCTACCAACGGAAAGGATCCCAATGCCATCAAGGATCCTTCGGATCTTTCAAGAGAGAGTTCACAATACCCACCAACCCCAAGTGGCCATAAGGGATTTAACAATGAATGCCATAGAAGGATCAAGAGGCCATGA

Protein sequence

MSGVLWFPDACLSRGTKRKLTQSTLLQLNFYSRSKVQHQSHVLKSEKNECSVGPGAGLMHNTVRKFPEDASCIENDEIICESLVECAMQPQKDCLLDTLNNCERANDASEICSQKKRITSGKAPAKDDLSGMILQTFIVGRKYSDKKELSLGESISLERDPTNGKDPNAIKDPSDLSRESSQYPPTPSGHKGFNNECHRRIKRP

Homology

[Close]

BLAST of Cla003879 vs. Swiss-Prot
Match: FAN1_ORYSJ (Fanconi-associated nuclease 1 homolog OS=Oryza sativa subsp. japonica GN=Os06g0171800 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-11
Identity = 60/182 (32.97%), Postives = 84/182 (46.15%), Query Frame = 1


Query: 9   DACLSRGTKRKLTQSTLLQLNFYSRSKVQHQ----------SHVLKSEKNECSVGPGAGL 68
           D CL+RGTKRKLTQSTLL  +F  ++   +            H+  ++ N  S G    L
Sbjct: 85  DICLTRGTKRKLTQSTLLDFSFSRKATDDYALNNLNTSDEAEHMEPTDGNVSSDGAFFSL 144

Query: 69  MHNTVR-KFPEDAS---CIENDEIICESLVEC----AMQPQKDCLLDTLNNCERANDASE 128
            ++ V  K   +AS   C+     I E+   C     + P  +   +T NN       S 
Sbjct: 145 NNDKVNSKGSANASSPGCLHGSPDISETCDTCLPPNVLLPYTE---NTANNGVVKKCLSH 204

Query: 129 ICS-QKKRITSGKAPAKDDLSGMILQTFIVGRKYSDKKELSLGESISLERDPTNGKDPNA 172
           + S      T G     D  + +++ T IVGR++ +  EL  G SI+L RDP N KDP+A
Sbjct: 205 MPSTDATSSTIGLLSVTDSSNSVVVDTVIVGRRFHENIELQEGASITLLRDPQNAKDPDA 263

[Close]

BLAST of Cla003879 vs. TrEMBL
Match: A0A0A0KXZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G651690 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.9e-63
Identity = 125/163 (76.69%), Postives = 137/163 (84.05%), Query Frame = 1


Query: 9   DACLSRGTKRKLTQSTLLQLNFYSRSKVQHQSHVLKSEKNECSVGPGAGLMHNTVRKFPE 68
           D CLSRGTKRKLTQSTLLQLNFYSRSKVQHQ+HVLKSEK E SVGPG G M N + K P+
Sbjct: 85  DECLSRGTKRKLTQSTLLQLNFYSRSKVQHQAHVLKSEKKESSVGPGDGPMPNNIHKLPK 144

Query: 69  DASCIENDEIICESLVECAMQPQKDCLLDTLNNCERANDASEICSQKKRITSGKAPAKDD 128
           DAS IENDEI+C+SLVECAM+PQKDCL DTLN+CE +N ASEIC   K   S     KDD
Sbjct: 145 DASYIENDEIVCDSLVECAMRPQKDCLFDTLNHCEGSNGASEICCSPKNKISEMVLGKDD 204

Query: 129 LSGMILQTFIVGRKYSDKKELSLGESISLERDPTNGKDPNAIK 172
           LSGMILQTFIVGRK+S++KEL+LGE ISLERDPTN KDPNAIK
Sbjct: 205 LSGMILQTFIVGRKFSNEKELNLGERISLERDPTNVKDPNAIK 247

[Close]

BLAST of Cla003879 vs. TrEMBL
Match: F6I497_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0062g01040 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.0e-21
Identity = 71/171 (41.52%), Postives = 102/171 (59.65%), Query Frame = 1


Query: 9   DACLSRGTKRKLTQSTLLQLNFYSRSKVQHQSHVLKSEKNECSV-GPGAGLMHNTVRKFP 68
           DACL+RGTKRKLTQ TLLQLNF SRS  +  S   K  +N   +  P   L+ +T  KF 
Sbjct: 41  DACLARGTKRKLTQRTLLQLNFCSRSMDKLDSGESKHLENSGVLKAPDNNLVRSTTPKFS 100

Query: 69  EDASCIEND------EIICESLVECAMQPQKDCLL-DTLNNCERANDASEICSQKKRITS 128
              +  END      +I  +S++   +    + L+ D   + + ++++  +  + +    
Sbjct: 101 YLGAFEENDNKQFKLDIHLDSVMRNYIDSSAENLINDDTTSYDTSSNSPSLLPKDEMPKH 160

Query: 129 GKAPAKDDLSGMILQTFIVGRKYSDKKELSLGESISLERDPTNGKDPNAIK 172
               A D+LSG+ L+TFIVGRK+SD++EL++G SISL RDP N KDPNAIK
Sbjct: 161 DITVAMDNLSGVTLETFIVGRKFSDEEELNIGASISLLRDPDNVKDPNAIK 211

[Close]

BLAST of Cla003879 vs. TrEMBL
Match: W9RXE6_9ROSA (Fanconi-associated nuclease 1-like protein OS=Morus notabilis GN=L484_016655 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.2e-19
Identity = 72/171 (42.11%), Postives = 94/171 (54.97%), Query Frame = 1


Query: 9   DACLSRGTKRKLTQSTLLQLNFYSRSKVQ-HQSHVLKSEKNECSVGPGAGLMHNTVRKFP 68
           D CLSRGTKRKLTQ TLLQ+NF    KVQ H S   +S  N   +      + N V   P
Sbjct: 112 DMCLSRGTKRKLTQRTLLQMNFCLPEKVQIHSSKRAQSRSNLLLITGDGRTVGNVVHGLP 171

Query: 69  EDASCIENDEI---ICESLVECAMQPQKDCLLDTLNNCERAND---ASEICSQKKRITS- 128
            D  C E  +    + +S++       +D L  + + C+   D    +   S+   +   
Sbjct: 172 -DFDCFEESDSTSNMSKSVLNLKSALHEDGLSKS-SICDDNTDENIVTHFLSENNEVPDD 231

Query: 129 GKAPAKDDLSGMILQTFIVGRKYSDKKELSLGESISLERDPTNGKDPNAIK 172
           G A   DD+SG+IL+TFIVGRK+SD KE++ GE ISL RDP N KD NAIK
Sbjct: 232 GMAITLDDVSGVILETFIVGRKFSDAKEINFGERISLVRDPHNIKDHNAIK 280

[Close]

BLAST of Cla003879 vs. TrEMBL
Match: M5XKJ5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001589mg PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.7e-17
Identity = 67/167 (40.12%), Postives = 89/167 (53.29%), Query Frame = 1


Query: 9   DACLSRGTKRKLTQSTLLQLNFYSRSKVQHQSHVLKSEKNEC-SVGPGAGLMHNTVRKFP 68
           D CLSRGTKRKLTQ TLL+LNF   SK Q ++   K   N+          +   V    
Sbjct: 101 DVCLSRGTKRKLTQRTLLELNFCPDSKAQIRTCYSKELGNDLFHAAHDDSHVQRVVHGLS 160

Query: 69  EDASCIENDEIICESLVECAMQPQKDCLLDTLNNCERANDASEICSQ--KKRITSGKAPA 128
           + ++  E+ + +C S +          L+D + N +R N   +  S   K  +   +   
Sbjct: 161 DISAVEESADDVCGSSLN---------LMDDMQNQDRINANVDDLSWALKNEVPDVEMTV 220

Query: 129 K-DDLSGMILQTFIVGRKYSDKKELSLGESISLERDPTNGKDPNAIK 172
             DD+SG+IL+TFIVGRK+ D  EL LG  ISL RDP N KDPNAIK
Sbjct: 221 TLDDISGVILETFIVGRKFCDGNELDLGARISLLRDPDNPKDPNAIK 258

[Close]

BLAST of Cla003879 vs. TrEMBL
Match: A0A124SEJ9_CYNCS (HIP116 protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021448 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.5e-17
Identity = 65/172 (37.79%), Postives = 97/172 (56.40%), Query Frame = 1


Query: 9   DACLSRGTKRKLTQSTLLQLNFYSRSKVQ-HQSHVLKSEKNECSVGPGAGLMHNTVRKFP 68
           DACL+RGTKRKL+Q TLLQ NF S+SKVQ H +++  ++ N  S+      +     +  
Sbjct: 84  DACLARGTKRKLSQQTLLQFNFCSKSKVQFHSTNLDDTKSNLTSLEKDITDLGGVGTEDT 143

Query: 69  EDASC---IENDEIICESLVECAMQPQKDCLLDT-----LNNCERANDASEICSQKKRIT 128
           +  +C     +D+I+  +  + A     D  +       +NN  R N  S + ++ +   
Sbjct: 144 DSITCQSSSSSDDILLANADDSAEISVNDEKIGVRGGSPVNNGGRVNSPS-LLTETEVSE 203

Query: 129 SGKAPAKDDLSGMILQTFIVGRKYSDKKELSLGESISLERDPTNGKDPNAIK 172
              A + DD+ G +L TFIVGR++S++ EL  G SISL RDP N KDPNA+K
Sbjct: 204 DDSANSDDDILGKLLATFIVGRRFSEEGELHTGASISLCRDPENIKDPNAVK 254

[Close]

BLAST of Cla003879 vs. NCBI nr
Match: gi|659119459|ref|XP_008459669.1| (PREDICTED: fanconi-associated nuclease 1 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 260.8 bits (665), Expect = 2.0e-66
Identity = 131/163 (80.37%), Postives = 140/163 (85.89%), Query Frame = 1


Query: 9   DACLSRGTKRKLTQSTLLQLNFYSRSKVQHQSHVLKSEKNECSVGPGAGLMHNTVRKFPE 68
           D CLSRGTKRKLTQSTLLQLNFYSRSK Q QSHVLKSEK E SVGPG GLM +TV K P+
Sbjct: 85  DECLSRGTKRKLTQSTLLQLNFYSRSKDQPQSHVLKSEKKESSVGPGDGLMPSTVHKLPK 144

Query: 69  DASCIENDEIICESLVECAMQPQKDCLLDTLNNCERANDASEICSQKKRITSGKAPAKDD 128
           DASCIENDEIICESLVECAM+PQKDCL D LN+CER N ASEIC   K  TSG   A+DD
Sbjct: 145 DASCIENDEIICESLVECAMRPQKDCLFDALNHCERTNGASEICCSPKNKTSGMLVARDD 204

Query: 129 LSGMILQTFIVGRKYSDKKELSLGESISLERDPTNGKDPNAIK 172
           LSG+ILQTFIVGRK+SD+KEL+LGE ISLERDPTN KDPNAIK
Sbjct: 205 LSGLILQTFIVGRKFSDEKELNLGERISLERDPTNVKDPNAIK 247

[Close]

BLAST of Cla003879 vs. NCBI nr
Match: gi|659119461|ref|XP_008459670.1| (PREDICTED: fanconi-associated nuclease 1 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 260.8 bits (665), Expect = 2.0e-66
Identity = 131/163 (80.37%), Postives = 140/163 (85.89%), Query Frame = 1


Query: 9   DACLSRGTKRKLTQSTLLQLNFYSRSKVQHQSHVLKSEKNECSVGPGAGLMHNTVRKFPE 68
           D CLSRGTKRKLTQSTLLQLNFYSRSK Q QSHVLKSEK E SVGPG GLM +TV K P+
Sbjct: 85  DECLSRGTKRKLTQSTLLQLNFYSRSKDQPQSHVLKSEKKESSVGPGDGLMPSTVHKLPK 144

Query: 69  DASCIENDEIICESLVECAMQPQKDCLLDTLNNCERANDASEICSQKKRITSGKAPAKDD 128
           DASCIENDEIICESLVECAM+PQKDCL D LN+CER N ASEIC   K  TSG   A+DD
Sbjct: 145 DASCIENDEIICESLVECAMRPQKDCLFDALNHCERTNGASEICCSPKNKTSGMLVARDD 204

Query: 129 LSGMILQTFIVGRKYSDKKELSLGESISLERDPTNGKDPNAIK 172
           LSG+ILQTFIVGRK+SD+KEL+LGE ISLERDPTN KDPNAIK
Sbjct: 205 LSGLILQTFIVGRKFSDEKELNLGERISLERDPTNVKDPNAIK 247

[Close]

BLAST of Cla003879 vs. NCBI nr
Match: gi|778708082|ref|XP_011656118.1| (PREDICTED: fanconi-associated nuclease 1 homolog isoform X3 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 5.6e-64
Identity = 126/164 (76.83%), Postives = 138/164 (84.15%), Query Frame = 1


Query: 9   DACLSRGTKRKLTQSTLLQLNFYSRSKVQHQSHVLKSEKNECSVGPGAGLMHNTVRKFPE 68
           D CLSRGTKRKLTQSTLLQLNFYSRSKVQHQ+HVLKSEK E SVGPG G M N + K P+
Sbjct: 85  DECLSRGTKRKLTQSTLLQLNFYSRSKVQHQAHVLKSEKKESSVGPGDGPMPNNIHKLPK 144

Query: 69  DASCIENDEIICESLVECAMQPQKDCLLDTLNNCERANDASEICSQKKRITSGKAPAKDD 128
           DAS IENDEI+C+SLVECAM+PQKDCL DTLN+CE +N ASEIC   K   S     KDD
Sbjct: 145 DASYIENDEIVCDSLVECAMRPQKDCLFDTLNHCEGSNGASEICCSPKNKISEMVLGKDD 204

Query: 129 LSGMILQTFIVGRKYSDKKELSLGESISLERDPTNGKDPNAIKD 173
           LSGMILQTFIVGRK+S++KEL+LGE ISLERDPTN KDPNAIKD
Sbjct: 205 LSGMILQTFIVGRKFSNEKELNLGERISLERDPTNVKDPNAIKD 248

[Close]

BLAST of Cla003879 vs. NCBI nr
Match: gi|700197534|gb|KGN52711.1| (hypothetical protein Csa_5G651690 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 2.8e-63
Identity = 125/163 (76.69%), Postives = 137/163 (84.05%), Query Frame = 1


Query: 9   DACLSRGTKRKLTQSTLLQLNFYSRSKVQHQSHVLKSEKNECSVGPGAGLMHNTVRKFPE 68
           D CLSRGTKRKLTQSTLLQLNFYSRSKVQHQ+HVLKSEK E SVGPG G M N + K P+
Sbjct: 85  DECLSRGTKRKLTQSTLLQLNFYSRSKVQHQAHVLKSEKKESSVGPGDGPMPNNIHKLPK 144

Query: 69  DASCIENDEIICESLVECAMQPQKDCLLDTLNNCERANDASEICSQKKRITSGKAPAKDD 128
           DAS IENDEI+C+SLVECAM+PQKDCL DTLN+CE +N ASEIC   K   S     KDD
Sbjct: 145 DASYIENDEIVCDSLVECAMRPQKDCLFDTLNHCEGSNGASEICCSPKNKISEMVLGKDD 204

Query: 129 LSGMILQTFIVGRKYSDKKELSLGESISLERDPTNGKDPNAIK 172
           LSGMILQTFIVGRK+S++KEL+LGE ISLERDPTN KDPNAIK
Sbjct: 205 LSGMILQTFIVGRKFSNEKELNLGERISLERDPTNVKDPNAIK 247

[Close]

BLAST of Cla003879 vs. NCBI nr
Match: gi|778708075|ref|XP_011656116.1| (PREDICTED: fanconi-associated nuclease 1 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 2.8e-63
Identity = 125/163 (76.69%), Postives = 137/163 (84.05%), Query Frame = 1


Query: 9   DACLSRGTKRKLTQSTLLQLNFYSRSKVQHQSHVLKSEKNECSVGPGAGLMHNTVRKFPE 68
           D CLSRGTKRKLTQSTLLQLNFYSRSKVQHQ+HVLKSEK E SVGPG G M N + K P+
Sbjct: 85  DECLSRGTKRKLTQSTLLQLNFYSRSKVQHQAHVLKSEKKESSVGPGDGPMPNNIHKLPK 144

Query: 69  DASCIENDEIICESLVECAMQPQKDCLLDTLNNCERANDASEICSQKKRITSGKAPAKDD 128
           DAS IENDEI+C+SLVECAM+PQKDCL DTLN+CE +N ASEIC   K   S     KDD
Sbjct: 145 DASYIENDEIVCDSLVECAMRPQKDCLFDTLNHCEGSNGASEICCSPKNKISEMVLGKDD 204

Query: 129 LSGMILQTFIVGRKYSDKKELSLGESISLERDPTNGKDPNAIK 172
           LSGMILQTFIVGRK+S++KEL+LGE ISLERDPTN KDPNAIK
Sbjct: 205 LSGMILQTFIVGRKFSNEKELNLGERISLERDPTNVKDPNAIK 247

The following BLAST results are available for this feature:

BLAST of Cla003879 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAN1_ORYSJ	2.4e-11	32.97	Fanconi-associated nuclease 1 homolog OS=Oryza sativa subsp. japonica GN=Os06g01...	[more]

BLAST of Cla003879 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXZ8_CUCSA	1.9e-63	76.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G651690 PE=4 SV=1	[more]
F6I497_VITVI	9.0e-21	41.52	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0062g01040 PE=4 SV=...	[more]
W9RXE6_9ROSA	2.2e-19	42.11	Fanconi-associated nuclease 1-like protein OS=Morus notabilis GN=L484_016655 PE=...	[more]
M5XKJ5_PRUPE	2.7e-17	40.12	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001589mg PE=4 SV=1	[more]
A0A124SEJ9_CYNCS	3.5e-17	37.79	HIP116 protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021448 PE=4 SV=1	[more]

BLAST of Cla003879 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119459\|ref\|XP_008459669.1\|	2.0e-66	80.37	PREDICTED: fanconi-associated nuclease 1 homolog isoform X1 [Cucumis melo]	[more]
gi\|659119461\|ref\|XP_008459670.1\|	2.0e-66	80.37	PREDICTED: fanconi-associated nuclease 1 homolog isoform X2 [Cucumis melo]	[more]
gi\|778708082\|ref\|XP_011656118.1\|	5.6e-64	76.83	PREDICTED: fanconi-associated nuclease 1 homolog isoform X3 [Cucumis sativus]	[more]
gi\|700197534\|gb\|KGN52711.1\|	2.8e-63	76.69	hypothetical protein Csa_5G651690 [Cucumis sativus]	[more]
gi\|778708075\|ref\|XP_011656116.1\|	2.8e-63	76.69	PREDICTED: fanconi-associated nuclease 1 homolog isoform X1 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0036297	interstrand cross-link repair
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla003879	Cla003879.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla003879	Cla97C08G144760	Watermelon (97103) v2	wmwmbB104
Cla003879	Csa5G651690	Cucumber (Chinese Long) v2	cuwmB381
Cla003879	MELO3C022218	Melon (DHL92) v3.5.1	mewmB010
Cla003879	ClCG08G000310	Watermelon (Charleston Gray)	wcgwmB404
Cla003879	CSPI05G31410	Wild cucumber (PI 183967)	cpiwmB386
Cla003879	Lsi08G000240	Bottle gourd (USVL1VR-Ls)	lsiwmB469
Cla003879	CsGy5G030700	Cucumber (Gy14) v2	cgybwmB353
Cla003879	MELO3C022216.2	Melon (DHL92) v3.6.1	medwmB008
Cla003879	CsaV3_5G040440	Cucumber (Chinese Long) v3	cucwmB403

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla003879	Wax gourd	wgowmB123
Cla003879	Cucumber (Gy14) v1	cgywmB051
Cla003879	Cucurbita maxima (Rimu)	cmawmB016
Cla003879	Cucurbita moschata (Rifu)	cmowmB015
Cla003879	Cucurbita pepo (Zucchini)	cpewmB762