Cla003877 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla003877
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Ran-binding protein 10 (Fragment) (AHRD V1 -- F1L814_ASCSU); contains Interpro domain(s) IPR019589 Ran binding protein, CRA domain
Location	Chr8 : 4260033 .. 4272878 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGACTTTAATGAAAAGAAGACCTTCTCTGTCTCTCAAATCAAGGGAGCCGTTCAGCAGCAAGCCAGTTGGGCTTCTCTTTTTTCATCAGAAGGAATCCACCAGGCCACATTTATTTCAAAAGGAGGAGTCTCTATATCTTCAATCAACACATCACCAGCTGTCCCTTCATCTTCCTTAGCCGGCAAGTCTATCAAAGCTTCAGTACAAGAAGGAATAGAAAGAAGCCCTAAGCCACTTGAGCCTGCTGCCCACCCATAACCGATTCCAAATAAATTCTCAAGGCTATTGAAACCTTTTTGCAAGCATTTTTCCAGAAAAAAGAATTCTGTCCTTAAAAGCAGTTTTTTGGATTTCCCCCTAGATTTGTTGGAAGAAAGGTGCACTCAAGCATTAGTCCCCTCTCTCCATGGAGCCAGCTTAGCAATCCTCCTCTCCTCACCATTTCAATTTTAAAGTCCTCCACATCTCCAAGCGCAAAACCAATTTTTTGAGTGGCGTTCAACAATCTTCCCCAAATAGCCATCAGAAAAAGGCTTACGATTCAGATATTGATTCAATAGTAAGTGCTAGTAGTGAAGAATTAGAGAACTTAAAGGAAGAAGCTACCGAAGACTTCTCAGATCAAGTTGATAATTTCACAGAGGAGCTTAACTCTTTGTTCCAGATTGACGAAAGACATCAACTAGAGGAAGAAGTTTGGAATTCTCGTTTAAAGCCACTGCCTCAATTAGAGATTCCGGAGCATTTAAAGTCCATAATAGCAGAATGTGGACTCGTTTTGGGTTAATCCTTCTCTATCCTAATCATTTTGGTCGCGGCTTTTCGCTCTCAATGGATCAAAATTCAGCATCGTGGTTTGGTTAGCTTTTGATCTCATTATTCCGTGGCAGAGTATTGAATCTGGCTGCTTCCCCATCGATGGTTTTCCACCAGTTGATTCCTTAGCAGGATCTTCTTGTTCGGGCAGTTTTAGAGTTGGTGATTCTAAGAATTTTAGTAATTTCTTGGGCTGTTTTGGTCTGAAATTGTTCCATTTCGGTTGTATTTGCTACTTTTGATTCTCTATTTTTGTTAAGTTGGCTGTGCTAAAGTTGTTATTTAGTCTCCTTTATTGTACTCTGAGATTTTATCTCATTTCATTATATTAATGTAAGAGATTGTTTCCTTTCAAAAAAAAAAAAAATAAAACTTTCAAGGTTGCCGAGGGATGACTGAGTATCTCCTTCTCCACATTTCTTTTTGTTAGAAAGGGCTTTCTTTTGGTGGCAGGTTGGGGTGTGTGCCATTTTGTATGGTCTTTGAGGTGAGAGAAATAATAGAATCTTTAGGTTGATAGTGGGTAGTTTTCGGATGGTATTTGACCTGGGTTAGATTTTATGTTTCTCTTGTAGTTTCTGTATCAAAGGCCTTTTTATTATTATTCTCTTAATGCTTCGGTATTCATTATTTTTTTCTCAATAAAAGTTCGGTTATTCATCAAAAATAGTTGAAATATCGATTCGTCCATAGTTGTATGCCACTCATAGTAAATCTTAATTTTATTTTGTTAACTTTTATATACATGCATATAGACATATGGATAGATATCGTTTAATTAATAAAATTTAGTGTACCTTGAGACTAGAATCTCTGGAAGTCATTATAATGGTTGTATTATGTGATACGCCAAATTCTTTAAGTTACAGAAACAGGATTCATGCTCCCAAAAAATTGTTTGGTAGTGCGTACTTGTGGCAGTAGTATCTAAATATAGAGATGGGCAACCGCAATGCATATTGATATTTTTTCTGTGTTGCATTGTTGTTCGTAGGTATTTGAAACACAAGAGAGGATGAAGCAACAAGCCGCCATTGAGAAGTTATCTTTGCCATCAAATGTCAGTTATAGGTAAAGAAAATTGTTTTTAAAAATCCTTAAATCCTTCGAACCTCAGTAATTTGACATCTGTAATTTATCAAGTCATTGTAGAGTAACCATTTGACTATACTTTGGTTGAGGATTAATTTCCCAGTTCATGGGTAGTTGACTGAAGGTCTATTAATAAATCGTAGCTAGTATCAGGACACCTTGCCTTTTCATGAGCTTTCGACCAATTTGAGACCCAAAGAAAGAGAAGTAGATTTCTCTGACGGTCATGTTTTACAAATTTATATGTTGATTTGTTATTTGATAAAATAACAGAAGTAGAATTGGTCTTTCAATGATAAAATCTATGAGATTGATTAAATATGATTATAACCTTCCATCATCCAGAAGCCATCTTTATTTATTTATTTATTCATATACATCCAGAAGTGAATTAACTAGCAAGTACTGTTGATATATATACATGCATGAATGAATGTAAGGAATTGGCATTTCATTGAGCATACTGACCGAATGGAAGAAAGCAGCAGGATAGAGCTTGAATGAGGAAAGAGCTTTTACTCGTGCATATTCGTAAATTACTTATTTGTCATGTCAGAACAAAGTGTATGATTTGACTGCAGACACATTTGTTTTTTGTTACCAGAATAGTGCGCTCATACTTGCAACATTATGGTTATGAGGATACGCTCAGTGCGTTTGATATGGCTTGCCAAAGCACTGTTCCTCCTATCTATATAGCTCAGGAAAATGGCTTTGATGAGCAAGATATCGTGTATGCTCTAAACCAGAGAAAGACTTTAAGGCAGGTATGAATTATTTCACCAAAGATTCCTTCTGTTCTTTATGAGGGGACTGGGGAGCTTTCCCTTGATTTTTTTTTTTTTTTTTTGATAAATCTGTGTATAATTGTCAGAAATGTGTCTTTATCACAATGTTTTCGTTTATTGATGAAAAAAAGAATAAAAATAATGAAGTATGATGATATTTTATTATAGGATGTAAGAACACTTTTGGTCCTTGAACTTCCGTAAAAGTAACAATTTACTCCCTGAACGTTAGGGTGTGTTTGGAATAGTTTTTCAAGTGTTTAATTTAAAAAATAAGTCATTTTGAAAAAAAAAAAATACAAGTGCTTGGTAGCCACCCAAATGGATTTTGAAAGTCATTAGTGTCTTTTTTATAAAAAGTTTTTATCAAAAGTGTTTAAATGAAAATGGACTTTTGAAAAACATTTAATTTTTAAGTTAATCGAATCGGACCCTTAATTTGTAACAATGTAGTCCTATACTTTTAAATTTGTAACAATTTAGTTTCCATTCTTTCAAATTTGTAACAATTTAGCCCCTACCAGGGGTGTTTGTGGGTTGGATTGAAGTACTTTTTAGACCCAACCCAATTGTTCGGGTTATAAGTTTCTTCAACCCAAATAACCCTTATTAAATAATGAATCTAACCCAATCCAACAATGAAACATTTGGATTGGGTTGGTTCGGGTTAGTTGGGTCATTTATTTAAATTTATATTCTAACAATAAGCAAAATGTTAATATGTAAACATTTTATTTAATTATTTTCATATATTGAATGAGAATTAAGAACTCAATTTAAGTTATATTATGATTTTTTTTCTTTTCAAAATGCTAATTTTTTCTTTTAAGAGTTAGGAGAATAAATTAGCAAAAAAATTCAGGAAATTAAATAAAATTAAAATAAATATATGTATGTTTTGGTTTGATTCCAATCTTTTTTTTGTGGTGCCTACTATTTTTCGTCCTTTGGTTTCGGCCTCTTTTTTCAGATTTATGTTCTGTTCCATTTTCAATGATTCATTAAAAAAAAGAAAAAGAAAAAAAAAAAAAATCTTACCTGGCTGCCCACTGTAAAAGCTGCGAACAGAGGACACAATATTGGTAGTTGAAAAATATCTCTTTGCCTTCGCCTAGAATGTGTGGCCTGTGTGCACAATGAGTCAGGTTCCTGTTTCCCATAATGGATGTGCATTGTAAATTTTATAATTGCTGAATTTAATCTTTTATTATTGCCCTCTTTTTCGTTGAATGCCAATTTGTCACCCCGTTGTATCTCATTAGGTACAGGGTTTAGGTAGGTGCATTTCTTATCTTAGTTTCCCTTCTTTCGAGTTCATTCCTTTCTTTATTTAGCACATAGAAAATAAAACAAGAAAAAAGGAAAAGAAGATGAAAAAGAGAAAATGAACAATCAGATTCAACTTAACTAATATAATACTTCTTACCTTAGTTTCTTTCTTCCACCCATCATAGCACTTAATTTTGTGTTACAAGAAAACAAATGTAATAACTGTTACATTTTGGAGAGAGGGAGGCAGCTGCTCATAATTTAATGAGTTATGTCAATCTATCAGCCGTTGTCGAACTTTGCTATTGATCAGTTTCTTTCTGTTGATGAAGCTTATCAGGAAGGGGGAGATTGATGCTGCACTTGGAAAGCTTAGTGAGTGGTATCCGCAGATTGTTCAGGTGAATCATTATTCGATTCAATTTTTCACATTTGTTTTATCATCTGCAGAACACATAATACCCAACTATGTATGATTTCTAATGTAACAACTAACACTAATCTTGGAAGTTTCTTGGAATGATTCTTTATTCAAGAATACCTCAATACAACATGTTGGATACCCATTTTCCTTCCCATATCCTGATTTTCCAACTTCAAAAGTTACAATGTGAGCATAATACTTTCATGTATCAAATCAGCATTTGATTCTTGAGGGAATTTTCTTGAAAGACCTCCAGATGTTCCAAATTCAACCACATTGGCTTCAATTGGATCTCCTCCACTGCGAACCACATGGGATCATGTTCGTTTGGAAATTTAGCTTATTTTCTGAATGTGGTTATGCAAAAAACTTTTGGTTGGGCTTGCTGCTATTAAGAAGAGACCTAAATTACTATGCAGCAACACGGTTAAAGCCCTGCTAGCTGAACTATGGTTTGAAAGAAACCGGTGAGTTTTCCATGATAAAGCTTCCTCTTGATTAGATCGTTTTGAGTTTGCTCGGCTAAATGCTTCTTCTTGGTGCACACTTTCAAGAGCTTTGGAAGATTTCTCTATTCAGGAATTAAATTTGAATTGGTGGACATTCATTTCTTCTCAGCATTAGAACATCTCCCCCTCTCTAACTTTCAGAGTGCTAGATGTCCTATGTCTTGCCTTGGCAGTGTTTTTAATTGTAATTTTCAGCTTTGTATTGTTTCTTCTCATTTGGATTTGATTATTTTTGAAGCCATAATTTTCTTCCATATCAGTAAAAAATTCTCTCCAAACAAAATAAAATGTCATCTTCATCAAGATATTCAGAAGAACTCGAAAGAAATTCATCCTCTATAGTCGTCAGTTCTAATTGTTCATGGCTACCTTCAAATTAATCAGCAGATCATGAAAAAGTAGTTCTTCCTTTGTGTATCCGTCAACATCTACAAAGAAAACTTGTTTAGTTTGAAGTTCTTGAATTCGAACAGGTGGGAGTACATCTCTTGGAAGTTCTTGAGGCAATCTTCCATGTTCTTGAGGTGGCCTTTGATGAAACAAGATTTCTTCTTCTTTGTAATTGTTTGTGGATTTGGTTTTGAATTGGAGGGGGGTGGTTTCTTGCGTAGTCTTGCGGTCTTCTTCCCTCAATTGGCTGCTATCCCTCAGGCTAAAAGATTTCCTTTGCTCTATTTCTGCCATTATAGTGCTGCTGGTCGCTATTTGGCCAAATGGACACTGTCCATTTTTTCGGTTAAAGCCTTTACCATTTGATGAAGTTCGATTACTCTGCAACTCTTCCATGGATTCTTCCATACCTATGGAATTGTTAGGACTTGGGAGATTGACCTTGGGATGAGGATTTCTACTCCTTTGCTGGCTGTCACATTCGATCCCTTTGTCGAAAGCTGACACCAAACTAATGTAACACTAATCTTGGAAGTTTTGTGGGATAATATTTTATTCAATAATACCAAAATACTATCTAGGAACCCTACTTAAAGGTTGCATTCCAACATTTGGAACAACTTAAGGTATGGTAAAACAATGCACAGTGACATAGTAACTTGGCCAAAAAAAAAGTAAAACCTCCACAGTAAACTAGAGCCCGAGAGCGAGAGCTAGAGGACTAAAGCTAGAGTGAGAGTCTAGACCATGAGCGAGAAAGAGTGCCTAGACCGTGCTGTGTCAATTCCAGACTATATATATATATATATGTAGGTTTATGCTCACACATCAATAAAGGTCGGCAATGGATAATGAATGTCCAAACTTCTTTTTGGAAGGACGTACGGACAGGGAACACAAATCTTCTACATCTCTTCTCTAGACTTTATTGTATGCACTAGGATCACAAATCTTCAACACCTCTTCCCTAGACTTCACTGCTTATCGAATAAGAAAGAGGCAAGTGTTGCTGATTTTTGGTGCCCCAACAAAGAAATATCTACCTACTTCGTCGTAGAAATGTCACGGACCCTGAGATTGAAGAATGGACAGCTTATCAACTATTTTACTCCCCCTTAGAGGAACAAATTGTGAAGATTCTTGGTATTTAGTTCTGGAAATGGTTTTTTCTTGTTTTTCCTGTTCTTCATTCTTTTCAATATTGCCAACTATATATCCCATAGTTTCCATTTCTAATCAATCAAGTTGAATTTTTTCCTTGTATCCTAGTTTGATCAGGTCAAGAACAGTCTTCTTGCAAAGATCTTTTATTTATTGTCTTGACTTCAAGTTTTCTTCTTGCAGGATGAAAAATCAGCTACTTGCTTTCTCCTTCATTGTCAAAAGTTCATTGAATTAGTCAGGGTACTCTTTTCATTCTAGAAATATGTAAATGTCACATATTTTCTAATCGTAATGTAATATCCGGTTGTTTATGTGTTTCCTGCTGTTATTATATGTAGGTTGGAGCGCTAGAGGAGGCTGTTAAATATGGAAGGAATCAGTTGGGAAAGTTTTATGGTCTGCCTGGGTTTCAGGATCTAGTTCAGGTACTGAGATTTTTCTTCCTTGTAGGAAATGTGGAATTATTTAGTACAAGTCACAATACCTCATGTTCAAGTGTCATTGATTTACATGCTTGTTTATGCAAATATATTAAAGGTGATGACAATTTTCTCTTCTTTGTTTACACCATTGTCCACACACGACCTACAAGAAATTACCTCCCACCCGGCAGATGGGCTTTTACAAGTGTTGGATATAAATCATGGTGTGTTAAGTGTTCTCCATAAAGACTGCAAGAGTTCATGGAACATATTTTGCGGTAACCTTCATAAAGAAACATTTGAGATTCTTTGGATTATAATGATACTAAACCATTGTTTTCAGAGATTTGGTCGGGGGAGACATAGAACTGTTTGAGAATCTTCATGAAGCTTTTCTAATTTTTTGTCTAAGTGATATTTTTATCTTCACTAGGTGTACTCTACAATTTTGTAATTATGCGTCCTTTTAGGACTAGTAGAAGTTCATTACAACCTCCTTTGGTTGCTGAGTGGGAGAGGAGCTGATCTTTACATTCTTTTGGAACTTTTCTCGCATCAATGAAATGTTTGTTTCCTATTAAAAAAACATGGAGAATCAACTGGAGTGGTTCTTAGAGACAACATGCTGCAGATCCTGTGCGGTCCTTTGTTGAGTTCAAATGCATGTTTATTGGGGACTAATGCAGTCAAAGGCCTCCTATCAGAGTTATGGATGGAACGGAATAGAAGCAATGTATATTTCAAGGTTCTTCTCGTTCATGTTTTGAGTGTTATGATTCAGCTCATTTGAAGATGTCATGGTGCTCTATGCCAGAAAGTTTCGAGGGTTTTTCCATCCAGGACATAAATAGGGTAATCTAAGTAGTAGAAGGTAAAAAGATAGTAAAGGGCAATATGACAAGGATGTTTACAATAAAATAATAATAAATATATTTCTTTTTTTATAAGAACAACAACTTTCATTGAGAAAAAATGGAAGAATACACGAGCATACAAAAGCCAAGTCCACAAAAAAGAGGGGGGAATCCTACTAGAAAAAGGGACTCCAACTATACAAAATCATACCAATAGAATGATTACAAAAGACCTTCGAAATCAAAGCCTAATGAGAAACATGAAAACGAACAAGAGATCATATATCTCTAACATCCCTCTCAATACCCCTAAATACCCTATCGTTCCTCTCACTCCACAACACCCAAACAGTAGCAAGCTAGAGAAAATGGCCCCTCCATATTGCGGATTGAGGAGGAATTCCTCGATCTTTATCTCTAATGTCTCTATAATATACAACTCAAGTCACTAAACTTTTAGGTCTATGCCAAATAGGCCAAAAGATTTTCTAATTTATCATTGTTACGGACTCACTTCGTATAATATTATCTCTGGTTGATGGATTTGGAATCAATTGAAGATACAAGGACAACGTGAGCTTCCTCAATACCAATCACCTGTTATTTGCTGATGACACGATTCTTTATTTCAACAACAGTGAACTCGATATCCTTAACCTGATCTCTCTTTTTTGAGCATGCTTTTGACCTTAATATCAACAGGCAAAAATCAGATTTTATTTTTTATTTTTTATTTTTGCGCGCTAACTATGATAGGTTTGGGTGGATTATATTGCCTAAGAAACATGATTGCAAAGTGGGTAATTGACATGCTACATATTTGGGCCTTCCTCTCTATGGGATGCCTTCCTCCATATCCTTTTGGCAACCGGTATATGGACAAGATTGGCAAAAAGTTGCATGCCTGGCCGCGTAATTCTCTCTCTAAGGAGGTAGACTAACCCTCTTAAGTGCCACCTTGTCCAACTTGCCCATTTATTATTTATCCCTCTTCCCATGTTTCTACTAATGTGGTGGATATGATTGAGATGCTCTTTTGTTATTTCCTATGGTCGGAAAATAGGGACAACAATTTTTTTTGAAATGGAAACTACATGAAATAATGAAATGAGACTAATGCTCAAAGTACAATACTTAGATTCAAAAGGCGAAACTCAAAAACGAGAAACCTAGGATCAGGAGGTGCATCCGGACATCTCAACTATTTTTTTTTTTTTTTTTTTTTATCCGTGTGGGTCCGGGCCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATCACTAGGCCAACCCATGATGGTTGACATCGTTATCACTAGGCCAACCCATGATGGTTGACATCTCAACGATGTCAACTATGTTGACACCTCTAGCACCCTCATCATATCCTAATACAACAAACAAACCAATCTTAACAAAAACATGGGCAATAAGGCCAAGAATATAAGCCTTGAGAAATTAAATTGAAAAAATAAAGGCTCTCCGGTTCAAGCAAATGACTTGGATGGAAAAATCTGAAAATGTCTTAGAAAGACAGCACCAAGAAGAAACATTAAGTGGCGCAATTTCAAGTTGATGCCTCCAAGCCGTAGACTTATCATGAAACAGGGACAACAATTTAAAACATTTTCTCAAATGGAACATCTTAAAACGCCCATTGATCTTGAAGGCTTGGGCATTGTCGATATCAGGCAGTCTAATAAAGCTCTTCTCAAACTGGATTTGGAGGTTAGGATTGGAAAAAGAAGCCCGATGGAGGAATCTCATTCAAGCCAAATATGGCTCCCAACCTTTTGATCTGAAGGCGGTTGATACCAACAGTGCTTCCTCAAAAAGCCCATGGAAGTATATCATGAAACAGAAAGACCTAATTATTCATAATATCCAATGCAAGCCGGGGAAGGGTGCATCCACAACATTTTGGTCCGGCACCTGTTGCAACTTGCAACTGGTTTACTCCAATCTTTTTGTTCTTGTAAATTCCAAAGAGGTTTCCATTGTCCGTGTTTGGAACAGCGAGAATGGAGCATGGACTGGAATATCAGAAGAAACTCTAAGGATGAGGAAATTTCCAAATGGGCCTCTCTTTCTCACCTCATCCCTAGCATCTTTTTAACTCAAAGCCACCGAATCTTGGTTTTGGAAACTCAACAACAGTGAGATTTTCGCATCAAAATCCCTTTATGTACATCTCATAAACACTCACCAATCTGTGGCGCAGAACCTAGACAATAATGTTTGGAAGGCTCTCTTGCCCAAAAAGAATAAAATTTCTCGTTTGGGAATTAACTCATTCCTGACTCAACACCATGAACAGACTACAGAAACGATGATCCATGCCCTTGGATCAGTCTCTCCCCTTCATGGTGTTGTTTATGCCAAAAAGACCTTGAATCACACAATCACTTGTTTATCAATTGTCCCTTTACTGCAGATATTTGGTCGGAAGTATTATAAGCCTTCCAATGGTCCATGGTAACCCCCAATGACTCACAAAGCTGGCTTAGGTTGCTGCTTATTGACCACCCATCCAAGGCCAACAAAGATCGTATTTGGGCAAGTATTGTTTTAGTGATTTTGTGGAAGATTTGGGATGAAAGAAATACAAGAATATTCCAAGACAAAGCCAAATCTTCAAAGGACATTTTAGAATCCACTTTATTCTACCTTTCTTTTGGTGTAAAGATATACAGGCCATCAAGAGCTACAGTTTTTCTTTTTTCATTTCATTTCATACATTCAATTAAATGTCTCCCGTCCAATGAAATAGTCTCGAGGTCTTGGAATAGTAAAACGATGTGAGTTGACTGGAGTTTTCCTCCTAAGGTAATCCTTTTCAGAATTTTTGTGGCCTGATTATTGGGTTAGTCCTTGGATGGGCTAGTGTCTCTTGTGCGGTTGTTTCTTCCATTGATAATGATAGGACTCAAGAAAATGAATATCAAGAAGTTTTTTGTTTGGAGTATTTGTTTGCATAAACTACATCAAGGTTTTTCTCTTTCAATAGACTGCTGAAAGTTGAAGAAGGTATGGTTTTACAGCTTTTTCCAGAGTTTTGGGTGACTTTGGTTCCATGTTGTCAAAGTTAGAGGATGGATTCTTCTAACTTTTATGTTTGTAATAGACCACCAATATTCTTAAAATATCATAGGAGGGGCAAAAAGGGAATGACCTATGTAATAGGTAGTGTGTCATTAGCATCCAATAGTGAAAGGATGGGCCCCATAGTTAGTTAGAGGAGGGGGGCGGGGGGGAGGGGAGGTCTATAGAAGCACGAGTGAAGGGGAATCAGGGTATGCTTTCTGTAGTTGATGATTTTGAGAGGAGGCTCAACTCTCTGAGGGGACTGAGAATTGTTTCTGGACTCTTGAGTCCTTTGATGAATTGAATAAGATTCCCAGATTATCTTTCTTTCTCCAAATTCTATTTTTGATTCCTATCAGTTTGCCCCCCTCCCCAAGTTCTTGGCTGCCTTTAGTTCAATGGATATGCTTATAAAGGCATTGTATTTCTCCAAATGCACTTGTCGGGTTGGTCTCCACATACGGTTTTGGTTTTATGGGTTGGATTTCTTATCGATTTTGTCGAAGCTGGAGTTGACTTTTTTTTTTCCTTTTTTTTTCCTAAAATCCATAATTGTCCGAGCCAACTTATGCACATCTCGACTAATCTCATAGGACAACCCGCCTGACCCTAGCCATTTATTGAGACTATGTCTCCTTTTAACCACTAGGCCAACCCATGATGATCAGCTGGAGTTGGCTTTCTCCCCCTTTGATTGTCTCCAATTATTTGCCCTCATCACTTGGTTGTTCTTGTAGTTTTAGATATAGTGCTTTTTGGAGTTTCATTCAAGAGCCAATTTGTTTTGTTATAGGTTGTATTTGATTGTATTTGCTTTACTTTTGCTTATTTTGTTTCATTGTATTTTGAGCATTAGTCCTTTTTCATTTATCAATGAAAAGTCTTGTTTCCTAAAAAAAAAACAGAAAAAAAAAAAAGAAGAAAGTCCCTTATCCAAGAAAAACAAGTGCATAATTGTTCCTTGAATTTTCAATTATTTCTAATAGATCTCTAAACTTTAAAAAGTGTCTAATATGTCCTAAATTTTGTGATTAATAGGTCCTAATAAACGGTCTAATCTTTGACATTTTTAAAACTCATTCTGGATAGTCAATTGAATGAATTTCTTATCAGGCATAAAATTCACATTTTATGTTTAATAGATTTGTTAATTTTAAAAAATGTTGTATTTGTTAGGAACCTACTAGACATTCAAGGATCTAGTAGACTCAAACATATAAATCGAGGGACTAAACTTATAATTTAACCTAATTATATTTGTCAATGAAATTGTTTCCTTGGAGGCCTGATAGATTTCATTCATCAATGAAATTATTTCTTAGAAAAAGAAGATAACAATATTGGGAAGAATTTCTGATCTCCTTATAGGGTTATCATTGATGCCTTGGAAAGTAATCCACCTTAGTTTTGTAAAATAACTTCTTATGTCAATATTTTCTGTCAAATTCATTTAGAATTAATTATGCCACTTACGTATCCATAATGATAAATTCTTGAAGTTAATTGTAAATGTATTACACTAGAGTATAACCTATTTGTTTAGGAATAATGTCTTCCGTTTGCAACACAGATTTGTAGTGCATGTATTTCTAGCAATTGAACTCTCTTTTCCCAGGACTCTGTTGCTTTGTTGGCATATGAACGACCACAAGAGTCCCCTGTTGGTTATCTTCTCGAGGATACACAGCGTGAAATTGTAGCTGACACGGTGAATGCCATGGTTTTATCAACTAATCCCAATGTGAAAAATTTACAAGGTTGTTTGCATCCATATCTCGAACGGTTGTTGAGGCAGCTGACTGCTTGCTGCTTGGTACGAAGGTCTTTGAATGGGGATCAAGGTGAAGCTTTTCAATTGCATCGACTGCTTAACAGCATTGAAAAGTCTAAGTGCTAG

mRNA sequence

ATGAAAGACTTTAATGAAAAGAAGACCTTCTCTGTCTCTCAAATCAAGGGAGCCGTTCAGCAGCAAGCCAGTTGGGCTTCTCTTTTTTCATCAGAAGGAATCCACCAGGCCACATTTATTTCAAAAGGAGGAGTCTCTATATCTTCAATCAACACATCACCAGCTGTCCCTTCATCTTCCTTAGCCGGCAAGTCTATCAAAGCTTCAGTATTTGAAACACAAGAGAGGATGAAGCAACAAGCCGCCATTGAGAAGTTATCTTTGCCATCAAATGTCAGTTATAGAATAGTGCGCTCATACTTGCAACATTATGGTTATGAGGATACGCTCAGTGCGTTTGATATGGCTTGCCAAAGCACTGTTCCTCCTATCTATATAGCTCAGGAAAATGGCTTTGATGAGCAAGATATCGTGTATGCTCTAAACCAGAGAAAGACTTTAAGGCAGCTTATCAGGAAGGGGGAGATTGATGCTGCACTTGGAAAGCTTAGTGAGTGGTATCCGCAGATTGTTCAGGATGAAAAATCAGCTACTTGCTTTCTCCTTCATTGTCAAAAGTTCATTGAATTAGTCAGGGTTGGAGCGCTAGAGGAGGCTGTTAAATATGGAAGGAATCAGTTGGGAAAGTTTTATGGTCTGCCTGGGTTTCAGGATCTAGTTCAGGACTCTGTTGCTTTGTTGGCATATGAACGACCACAAGAGTCCCCTGTTGGTTATCTTCTCGAGGATACACAGCGTGAAATTGTAGCTGACACGGTGAATGCCATGGTTTTATCAACTAATCCCAATGTGAAAAATTTACAAGGTTGTTTGCATCCATATCTCGAACGGTTGTTGAGGCAGCTGACTGCTTGCTGCTTGGTACGAAGGTCTTTGAATGGGGATCAAGGTGAAGCTTTTCAATTGCATCGACTGCTTAACAGCATTGAAAAGTCTAAGTGCTAG

Coding sequence (CDS)

ATGAAAGACTTTAATGAAAAGAAGACCTTCTCTGTCTCTCAAATCAAGGGAGCCGTTCAGCAGCAAGCCAGTTGGGCTTCTCTTTTTTCATCAGAAGGAATCCACCAGGCCACATTTATTTCAAAAGGAGGAGTCTCTATATCTTCAATCAACACATCACCAGCTGTCCCTTCATCTTCCTTAGCCGGCAAGTCTATCAAAGCTTCAGTATTTGAAACACAAGAGAGGATGAAGCAACAAGCCGCCATTGAGAAGTTATCTTTGCCATCAAATGTCAGTTATAGAATAGTGCGCTCATACTTGCAACATTATGGTTATGAGGATACGCTCAGTGCGTTTGATATGGCTTGCCAAAGCACTGTTCCTCCTATCTATATAGCTCAGGAAAATGGCTTTGATGAGCAAGATATCGTGTATGCTCTAAACCAGAGAAAGACTTTAAGGCAGCTTATCAGGAAGGGGGAGATTGATGCTGCACTTGGAAAGCTTAGTGAGTGGTATCCGCAGATTGTTCAGGATGAAAAATCAGCTACTTGCTTTCTCCTTCATTGTCAAAAGTTCATTGAATTAGTCAGGGTTGGAGCGCTAGAGGAGGCTGTTAAATATGGAAGGAATCAGTTGGGAAAGTTTTATGGTCTGCCTGGGTTTCAGGATCTAGTTCAGGACTCTGTTGCTTTGTTGGCATATGAACGACCACAAGAGTCCCCTGTTGGTTATCTTCTCGAGGATACACAGCGTGAAATTGTAGCTGACACGGTGAATGCCATGGTTTTATCAACTAATCCCAATGTGAAAAATTTACAAGGTTGTTTGCATCCATATCTCGAACGGTTGTTGAGGCAGCTGACTGCTTGCTGCTTGGTACGAAGGTCTTTGAATGGGGATCAAGGTGAAGCTTTTCAATTGCATCGACTGCTTAACAGCATTGAAAAGTCTAAGTGCTAG

Protein sequence

MKDFNEKKTFSVSQIKGAVQQQASWASLFSSEGIHQATFISKGGVSISSINTSPAVPSSSLAGKSIKASVFETQERMKQQAAIEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQENGFDEQDIVYALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIELVRVGALEEAVKYGRNQLGKFYGLPGFQDLVQDSVALLAYERPQESPVGYLLEDTQREIVADTVNAMVLSTNPNVKNLQGCLHPYLERLLRQLTACCLVRRSLNGDQGEAFQLHRLLNSIEKSKC

Homology

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BLAST of Cla003877 vs. Swiss-Prot
Match: GID8_NEMVE (Glucose-induced degradation protein 8 homolog OS=Nematostella vectensis GN=v1g247787 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.0e-12
Identity = 56/205 (27.32%), Postives = 97/205 (47.32%), Query Frame = 1


Query: 69  SVFETQERMKQQAAIEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQ 128
           S  E   R +    I KL        R++  YL   GY++    F +             
Sbjct: 2   SFAEEVNREEWMEKIGKLRFQRAEMNRLIMDYLVTEGYKEAAEKFRI------------- 61

Query: 129 ENGFDEQDIVYALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFI 188
           E+G      + +L+ R  +R+ ++KG+++ A+   ++  P I+ D      F L  Q+ I
Sbjct: 62  ESGTQPTAPLDSLDDRIKIREAVQKGDLEQAVSMTNKLNPDIL-DSNQQLYFHLQQQRLI 121

Query: 189 ELVRVGALEEAVKYGRNQLGKFYGLPG-FQDLVQDSVALLAYERPQESPVGYLLEDTQRE 248
           EL+R   +E AV++ + Q  +     G + + ++ ++ALLA++ P+ESP G LL  +QR+
Sbjct: 122 ELIREKDIEAAVEFAQGQFSEQGQESGRYLEELEQTMALLAFDNPEESPFGDLLHTSQRQ 181

Query: 249 IVADTVNAMVL-----STNPNVKNL 268
            VA  +NA +L      T P + N+
Sbjct: 182 KVASELNAAILEAEHKKTQPKLANV 192

[Close]

BLAST of Cla003877 vs. Swiss-Prot
Match: GID8_DANRE (Glucose-induced degradation protein 8 homolog OS=Danio rerio GN=gid8 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.9e-10
Identity = 48/166 (28.92%), Postives = 87/166 (52.41%), Query Frame = 1


Query: 95  RIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQENGFDEQDIVYALNQRKTLRQLIRKG 154
           R++ +YL   G+++    F M             E+G +    + +L++R  +R+++ KG
Sbjct: 31  RLIMNYLVTEGFKEAAEKFRM-------------ESGIEPNVDLDSLDERIKIREMVLKG 90

Query: 155 EIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIELVRVGALEEAVKYGRNQLGKFYGLP 214
           +I  A+  ++  +P+++ D      F L  Q  IEL+R+   E A+++ ++QL +  G  
Sbjct: 91  QIQEAIALINSLHPELL-DTNRYLYFHLQQQHLIELIRLRETEAALEFAQSQLAE-QGEE 150

Query: 215 GFQDL--VQDSVALLAYERPQESPVGYLLEDTQREIVADTVNAMVL 259
             + L  ++ ++ALLA++ P+ESP G LL   QR+ V   VN  VL
Sbjct: 151 SRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVL 181

[Close]

BLAST of Cla003877 vs. Swiss-Prot
Match: GID8_HUMAN (Glucose-induced degradation protein 8 homolog OS=Homo sapiens GN=GID8 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.2e-10
Identity = 49/166 (29.52%), Postives = 85/166 (51.20%), Query Frame = 1


Query: 95  RIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQENGFDEQDIVYALNQRKTLRQLIRKG 154
           R++ +YL   G+++    F M             E+G +    +  L++R  +R++I KG
Sbjct: 31  RLIMNYLVTEGFKEAAEKFRM-------------ESGIEPSVDLETLDERIKIREMILKG 90

Query: 155 EIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIELVRVGALEEAVKYGRNQLGKFYGLP 214
           +I  A+  ++  +P+++ D      F L  Q  IEL+R    E A+++ + QL +  G  
Sbjct: 91  QIQEAIALINSLHPELL-DTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAE-QGEE 150

Query: 215 GFQDL--VQDSVALLAYERPQESPVGYLLEDTQREIVADTVNAMVL 259
             + L  ++ ++ALLA++ P+ESP G LL   QR+ V   VN  VL
Sbjct: 151 SRECLTEMERTLALLAFDSPEESPFGDLLHTMQRQKVWSEVNQAVL 181

[Close]

BLAST of Cla003877 vs. Swiss-Prot
Match: GID8_CHICK (Glucose-induced degradation protein 8 homolog OS=Gallus gallus GN=GID8 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.2e-10
Identity = 49/166 (29.52%), Postives = 84/166 (50.60%), Query Frame = 1


Query: 95  RIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQENGFDEQDIVYALNQRKTLRQLIRKG 154
           R++ +YL   G+++    F M             E+G +    +  L++R  +R++I KG
Sbjct: 31  RLIMNYLVTEGFKEAAEKFRM-------------ESGIEPSVDLETLDERIKIREMILKG 90

Query: 155 EIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIELVRVGALEEAVKYGRNQLGKFYGLP 214
           +I  A+  ++  +P+++ D      F L  Q  IEL+R    E A+++ + QL +  G  
Sbjct: 91  QIQEAISLINSLHPELL-DTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAE-QGEE 150

Query: 215 GFQDL--VQDSVALLAYERPQESPVGYLLEDTQREIVADTVNAMVL 259
             + L  ++ ++ALLA++ P+ESP G LL   QR+ V   VN  VL
Sbjct: 151 SRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVL 181

[Close]

BLAST of Cla003877 vs. Swiss-Prot
Match: GID8_MOUSE (Glucose-induced degradation protein 8 homolog OS=Mus musculus GN=Gid8 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.4e-10
Identity = 49/166 (29.52%), Postives = 85/166 (51.20%), Query Frame = 1


Query: 95  RIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQENGFDEQDIVYALNQRKTLRQLIRKG 154
           R++ +YL   G+++    F M             E+G +    +  L++R  +R++I KG
Sbjct: 31  RLIMNYLVTEGFKEAAEKFRM-------------ESGIEPSVDLETLDERIKIREMILKG 90

Query: 155 EIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIELVRVGALEEAVKYGRNQLGKFYGLP 214
           +I  A+  ++  +P+++ D      F L  Q  IEL+R    E A+++ + QL +  G  
Sbjct: 91  QIQEAIALINSLHPELL-DTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAE-QGEE 150

Query: 215 GFQDL--VQDSVALLAYERPQESPVGYLLEDTQREIVADTVNAMVL 259
             + L  ++ ++ALLA++ P+ESP G LL   QR+ V   VN  VL
Sbjct: 151 SRECLTEMERTLALLAFDSPEESPFGDLLHMMQRQKVWSEVNQAVL 181

[Close]

BLAST of Cla003877 vs. TrEMBL
Match: A0A0A0KW89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G651700 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 8.7e-132
Identity = 242/295 (82.03%), Postives = 259/295 (87.80%), Query Frame = 1


Query: 36  QATFISKGGVSISSINTS---PAVPSSSLAGKSIKASV-------------FETQERMKQ 95
           Q  F +K G+ + ++      P  P+ ++  ++ +  V             FE QERMKQ
Sbjct: 174 QEFFFTKNGIVVGAVEKDMKGPLFPTIAVHSQNEEVQVNFGQKPFAFDLKLFEAQERMKQ 233

Query: 96  QAAIEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQENGFDEQDIVY 155
           Q  IEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMAC+STVPPIYIAQENGFDEQDI+Y
Sbjct: 234 QTTIEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMACKSTVPPIYIAQENGFDEQDIMY 293

Query: 156 ALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIELVRVGALEEA 215
           ALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIELVRVGALEEA
Sbjct: 294 ALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIELVRVGALEEA 353

Query: 216 VKYGRNQLGKFYGLPGFQDLVQDSVALLAYERPQESPVGYLLEDTQREIVADTVNAMVLS 275
           VKYGRNQLGKFYGLPGFQDLVQDSVALLAYE+PQESPVGYLLEDTQREIVADTVNAMVLS
Sbjct: 354 VKYGRNQLGKFYGLPGFQDLVQDSVALLAYEQPQESPVGYLLEDTQREIVADTVNAMVLS 413

Query: 276 TNPNVKNLQGCLHPYLERLLRQLTACCLVRRSLNGDQGEAFQLHRLLNSIEKSKC 315
           TNPNVKNLQGCLHPYLE+LLRQLTACCLVRRSLNGDQGEAFQLHR+LNSI+KSKC
Sbjct: 414 TNPNVKNLQGCLHPYLEQLLRQLTACCLVRRSLNGDQGEAFQLHRVLNSIKKSKC 468

[Close]

BLAST of Cla003877 vs. TrEMBL
Match: V4V742_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001078mg PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 2.0e-107
Identity = 192/244 (78.69%), Postives = 220/244 (90.16%), Query Frame = 1


Query: 71  FETQERMKQQAAIEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQEN 130
           +E QERMKQQ  IEK+SLP NVSY +VRSYLQHYGYEDTL++FD+A ++TVPP+++AQEN
Sbjct: 220 YEAQERMKQQMTIEKISLPPNVSYGLVRSYLQHYGYEDTLNSFDLAGKTTVPPVFVAQEN 279

Query: 131 GFDEQDIVYALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIEL 190
           GF+EQD VYALNQRKTLRQLIR GEIDAA  KL  W+P IVQD+KS+TCFLLHCQKFIEL
Sbjct: 280 GFNEQDNVYALNQRKTLRQLIRNGEIDAAFDKLRNWHPWIVQDDKSSTCFLLHCQKFIEL 339

Query: 191 VRVGALEEAVKYGRNQLGKFYGLPGFQDLVQDSVALLAYERPQESPVGYLLEDTQREIVA 250
           VRVGALEEAVKYGR +L K++GL GF++LVQD VALLAYE+PQES VGYLLED+QREIVA
Sbjct: 340 VRVGALEEAVKYGRMELAKYFGLAGFEELVQDCVALLAYEKPQESSVGYLLEDSQREIVA 399

Query: 251 DTVNAMVLSTNPNVKNLQGCLHPYLERLLRQLTACCLVRRSLNGDQGEAFQLHRLLNSIE 310
           DTVNAM+LSTNPNVK+L GCLH  LERLLRQLTACCL RRS+NGDQGEAF LHR+LNS +
Sbjct: 400 DTVNAMILSTNPNVKDLHGCLHSCLERLLRQLTACCLERRSMNGDQGEAFHLHRVLNSGK 459

Query: 311 KSKC 315
           K+KC
Sbjct: 460 KAKC 463

[Close]

BLAST of Cla003877 vs. TrEMBL
Match: A0A067H8C4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012451mg PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 2.0e-107
Identity = 192/244 (78.69%), Postives = 220/244 (90.16%), Query Frame = 1


Query: 71  FETQERMKQQAAIEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQEN 130
           +E QERMKQQ  IEK+SLP NVSY +VRSYLQHYGYEDTL++FD+A ++TVPP+++AQEN
Sbjct: 220 YEAQERMKQQMTIEKISLPPNVSYGLVRSYLQHYGYEDTLNSFDLAGKTTVPPVFVAQEN 279

Query: 131 GFDEQDIVYALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIEL 190
           GF+EQD VYALNQRKTLRQLIR GEIDAA  KL  W+P IVQD+KS+TCFLLHCQKFIEL
Sbjct: 280 GFNEQDNVYALNQRKTLRQLIRNGEIDAAFDKLRNWHPWIVQDDKSSTCFLLHCQKFIEL 339

Query: 191 VRVGALEEAVKYGRNQLGKFYGLPGFQDLVQDSVALLAYERPQESPVGYLLEDTQREIVA 250
           VRVGALEEAVKYGR +L K++GL GF++LVQD VALLAYE+PQES VGYLLED+QREIVA
Sbjct: 340 VRVGALEEAVKYGRMELAKYFGLAGFEELVQDCVALLAYEKPQESSVGYLLEDSQREIVA 399

Query: 251 DTVNAMVLSTNPNVKNLQGCLHPYLERLLRQLTACCLVRRSLNGDQGEAFQLHRLLNSIE 310
           DTVNAM+LSTNPNVK+L GCLH  LERLLRQLTACCL RRS+NGDQGEAF LHR+LNS +
Sbjct: 400 DTVNAMILSTNPNVKDLHGCLHSCLERLLRQLTACCLERRSMNGDQGEAFHLHRVLNSGK 459

Query: 311 KSKC 315
           K+KC
Sbjct: 460 KAKC 463

[Close]

BLAST of Cla003877 vs. TrEMBL
Match: M5XYJ8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005466mg PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.6e-107
Identity = 194/244 (79.51%), Postives = 221/244 (90.57%), Query Frame = 1


Query: 71  FETQERMKQQAAIEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQEN 130
           FE QERMKQQ  IEK SLP+ VS+ IVRSYL HYGYEDTL++FDMA ++TVPP++IAQEN
Sbjct: 218 FEAQERMKQQRMIEKFSLPT-VSHGIVRSYLLHYGYEDTLNSFDMASKTTVPPVHIAQEN 277

Query: 131 GFDEQDIVYALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIEL 190
           GFDEQD+V+AL +RKTLRQLIR GEID+ALGKL EWYPQIVQD+KSATCFLLHCQKFIEL
Sbjct: 278 GFDEQDVVFALTERKTLRQLIRNGEIDSALGKLREWYPQIVQDDKSATCFLLHCQKFIEL 337

Query: 191 VRVGALEEAVKYGRNQLGKFYGLPGFQDLVQDSVALLAYERPQESPVGYLLEDTQREIVA 250
           VRVGALEEAVKYGR +L KF+GLP F+DLVQD VALLAYERPQES VGYLLE++QRE+VA
Sbjct: 338 VRVGALEEAVKYGRMELAKFFGLPVFEDLVQDCVALLAYERPQESSVGYLLEESQREVVA 397

Query: 251 DTVNAMVLSTNPNVKNLQGCLHPYLERLLRQLTACCLVRRSLNGDQGEAFQLHRLLNSIE 310
           DTVNAM+LSTNPN+K+ Q CLH YLERLLRQLTACCL RR L+GDQGEAF LHR+LNS +
Sbjct: 398 DTVNAMILSTNPNLKDSQSCLHSYLERLLRQLTACCLERRLLSGDQGEAFHLHRVLNSCK 457

Query: 311 KSKC 315
           K++C
Sbjct: 458 KARC 460

[Close]

BLAST of Cla003877 vs. TrEMBL
Match: A0A061FJN0_THECC (SPla/RYanodine receptor domain-containing protein isoform 1 OS=Theobroma cacao GN=TCM_036425 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 9.7e-107
Identity = 191/239 (79.92%), Postives = 215/239 (89.96%), Query Frame = 1


Query: 71  FETQERMKQQAAIEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQEN 130
           +E QER+K Q  IEK+SLP N+SY +VRSYL HYGYEDTL++FD+A +STVPPIYIA+EN
Sbjct: 236 YEAQERLKHQMTIEKISLPPNISYGLVRSYLLHYGYEDTLNSFDLASKSTVPPIYIAKEN 295

Query: 131 GFDEQDIVYALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIEL 190
           GFDEQDIVYALNQRKTLRQLIR GEIDAA+ KL +WYPQIVQ+EKSATCFLLHCQKFIEL
Sbjct: 296 GFDEQDIVYALNQRKTLRQLIRNGEIDAAISKLRDWYPQIVQEEKSATCFLLHCQKFIEL 355

Query: 191 VRVGALEEAVKYGRNQLGKFYGLPGFQDLVQDSVALLAYERPQESPVGYLLEDTQREIVA 250
           VRVGALEEAVKYGR +L KF  L GF DLVQD  ALLAYERPQES VGYLLE++QR++VA
Sbjct: 356 VRVGALEEAVKYGRMELAKFVELDGFNDLVQDCGALLAYERPQESSVGYLLEESQRDVVA 415

Query: 251 DTVNAMVLSTNPNVKNLQGCLHPYLERLLRQLTACCLVRRSLNGDQGEAFQLHRLLNSI 310
           DTVNAM+LSTNPN+K+LQGCLH YLE+LLRQLTACCL RRS NGDQGEAF LHR+LNS+
Sbjct: 416 DTVNAMILSTNPNMKDLQGCLHSYLEKLLRQLTACCLERRSANGDQGEAFHLHRVLNSV 474

[Close]

BLAST of Cla003877 vs. NCBI nr
Match: gi|778708086|ref|XP_011656119.1| (PREDICTED: ran-binding protein 10 [Cucumis sativus])

HSP 1 Score: 478.0 bits (1229), Expect = 1.3e-131
Identity = 242/295 (82.03%), Postives = 259/295 (87.80%), Query Frame = 1


Query: 36  QATFISKGGVSISSINTS---PAVPSSSLAGKSIKASV-------------FETQERMKQ 95
           Q  F +K G+ + ++      P  P+ ++  ++ +  V             FE QERMKQ
Sbjct: 174 QEFFFTKNGIVVGAVEKDMKGPLFPTIAVHSQNEEVQVNFGQKPFAFDLKLFEAQERMKQ 233

Query: 96  QAAIEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQENGFDEQDIVY 155
           Q  IEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMAC+STVPPIYIAQENGFDEQDI+Y
Sbjct: 234 QTTIEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMACKSTVPPIYIAQENGFDEQDIMY 293

Query: 156 ALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIELVRVGALEEA 215
           ALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIELVRVGALEEA
Sbjct: 294 ALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIELVRVGALEEA 353

Query: 216 VKYGRNQLGKFYGLPGFQDLVQDSVALLAYERPQESPVGYLLEDTQREIVADTVNAMVLS 275
           VKYGRNQLGKFYGLPGFQDLVQDSVALLAYE+PQESPVGYLLEDTQREIVADTVNAMVLS
Sbjct: 354 VKYGRNQLGKFYGLPGFQDLVQDSVALLAYEQPQESPVGYLLEDTQREIVADTVNAMVLS 413

Query: 276 TNPNVKNLQGCLHPYLERLLRQLTACCLVRRSLNGDQGEAFQLHRLLNSIEKSKC 315
           TNPNVKNLQGCLHPYLE+LLRQLTACCLVRRSLNGDQGEAFQLHR+LNSI+KSKC
Sbjct: 414 TNPNVKNLQGCLHPYLEQLLRQLTACCLVRRSLNGDQGEAFQLHRVLNSIKKSKC 468

[Close]

BLAST of Cla003877 vs. NCBI nr
Match: gi|659119463|ref|XP_008459671.1| (PREDICTED: ran-binding protein 10 isoform X1 [Cucumis melo])

HSP 1 Score: 478.0 bits (1229), Expect = 1.3e-131
Identity = 242/295 (82.03%), Postives = 258/295 (87.46%), Query Frame = 1


Query: 36  QATFISKGGVSISSINTS---PAVPSSSLAGKSIKASV-------------FETQERMKQ 95
           Q  F +K G+ + ++      P  P+ ++  ++ +  V             FE QERMKQ
Sbjct: 174 QEFFFTKNGIVVGAVEKDMKGPLFPTIAVHSQNEEVQVNFGQKSFAFDLKLFEAQERMKQ 233

Query: 96  QAAIEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQENGFDEQDIVY 155
           Q  IEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMAC+STVPPIYIAQENGFDEQDI+Y
Sbjct: 234 QTTIEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMACKSTVPPIYIAQENGFDEQDIMY 293

Query: 156 ALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIELVRVGALEEA 215
           ALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIELVR GALEEA
Sbjct: 294 ALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIELVRAGALEEA 353

Query: 216 VKYGRNQLGKFYGLPGFQDLVQDSVALLAYERPQESPVGYLLEDTQREIVADTVNAMVLS 275
           VKYGRNQLGKFYGLPGFQDLVQDSVALLAYE+PQESPVGYLLEDTQREIVADTVNAMVLS
Sbjct: 354 VKYGRNQLGKFYGLPGFQDLVQDSVALLAYEQPQESPVGYLLEDTQREIVADTVNAMVLS 413

Query: 276 TNPNVKNLQGCLHPYLERLLRQLTACCLVRRSLNGDQGEAFQLHRLLNSIEKSKC 315
           TNPNVKNLQGCLHPYLERLLRQLTACCLVRRSLNGDQGEAFQLHR+LNSI+KSKC
Sbjct: 414 TNPNVKNLQGCLHPYLERLLRQLTACCLVRRSLNGDQGEAFQLHRVLNSIKKSKC 468

[Close]

BLAST of Cla003877 vs. NCBI nr
Match: gi|645224263|ref|XP_008219025.1| (PREDICTED: ran-binding protein 10 [Prunus mume])

HSP 1 Score: 400.2 bits (1027), Expect = 3.3e-108
Identity = 194/244 (79.51%), Postives = 223/244 (91.39%), Query Frame = 1


Query: 71  FETQERMKQQAAIEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQEN 130
           FE QERMKQQ  IEK SLP+ VS+ IVRSYL HYGYEDTL++FDMA ++TVPP++IAQEN
Sbjct: 218 FEAQERMKQQRMIEKFSLPT-VSHGIVRSYLLHYGYEDTLNSFDMASKTTVPPVHIAQEN 277

Query: 131 GFDEQDIVYALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIEL 190
           GFDEQD+V+ALN+RKTLRQLIR GEID+ALGKL EWYPQ+VQD+KSATCFLLHCQKFIEL
Sbjct: 278 GFDEQDVVFALNERKTLRQLIRNGEIDSALGKLREWYPQVVQDDKSATCFLLHCQKFIEL 337

Query: 191 VRVGALEEAVKYGRNQLGKFYGLPGFQDLVQDSVALLAYERPQESPVGYLLEDTQREIVA 250
           VRVGALEEAVKYGR +L KF+GLP F+DLVQD VALLAYE+PQESPVGYLLE++QRE+VA
Sbjct: 338 VRVGALEEAVKYGRMELAKFFGLPVFEDLVQDCVALLAYEQPQESPVGYLLEESQREVVA 397

Query: 251 DTVNAMVLSTNPNVKNLQGCLHPYLERLLRQLTACCLVRRSLNGDQGEAFQLHRLLNSIE 310
           DTVNAM+LSTNPN+K+ Q CLH YLERLLRQLTACCL RR L+GDQGEAF LHR+LNS +
Sbjct: 398 DTVNAMILSTNPNLKDSQSCLHSYLERLLRQLTACCLERRLLSGDQGEAFHLHRVLNSCK 457

Query: 311 KSKC 315
           K++C
Sbjct: 458 KARC 460

[Close]

BLAST of Cla003877 vs. NCBI nr
Match: gi|567884211|ref|XP_006434664.1| (hypothetical protein CICLE_v10001078mg [Citrus clementina])

HSP 1 Score: 397.1 bits (1019), Expect = 2.8e-107
Identity = 192/244 (78.69%), Postives = 220/244 (90.16%), Query Frame = 1


Query: 71  FETQERMKQQAAIEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQEN 130
           +E QERMKQQ  IEK+SLP NVSY +VRSYLQHYGYEDTL++FD+A ++TVPP+++AQEN
Sbjct: 220 YEAQERMKQQMTIEKISLPPNVSYGLVRSYLQHYGYEDTLNSFDLAGKTTVPPVFVAQEN 279

Query: 131 GFDEQDIVYALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIEL 190
           GF+EQD VYALNQRKTLRQLIR GEIDAA  KL  W+P IVQD+KS+TCFLLHCQKFIEL
Sbjct: 280 GFNEQDNVYALNQRKTLRQLIRNGEIDAAFDKLRNWHPWIVQDDKSSTCFLLHCQKFIEL 339

Query: 191 VRVGALEEAVKYGRNQLGKFYGLPGFQDLVQDSVALLAYERPQESPVGYLLEDTQREIVA 250
           VRVGALEEAVKYGR +L K++GL GF++LVQD VALLAYE+PQES VGYLLED+QREIVA
Sbjct: 340 VRVGALEEAVKYGRMELAKYFGLAGFEELVQDCVALLAYEKPQESSVGYLLEDSQREIVA 399

Query: 251 DTVNAMVLSTNPNVKNLQGCLHPYLERLLRQLTACCLVRRSLNGDQGEAFQLHRLLNSIE 310
           DTVNAM+LSTNPNVK+L GCLH  LERLLRQLTACCL RRS+NGDQGEAF LHR+LNS +
Sbjct: 400 DTVNAMILSTNPNVKDLHGCLHSCLERLLRQLTACCLERRSMNGDQGEAFHLHRVLNSGK 459

Query: 311 KSKC 315
           K+KC
Sbjct: 460 KAKC 463

[Close]

BLAST of Cla003877 vs. NCBI nr
Match: gi|568838480|ref|XP_006473239.1| (PREDICTED: ran-binding protein 10 [Citrus sinensis])

HSP 1 Score: 397.1 bits (1019), Expect = 2.8e-107
Identity = 192/244 (78.69%), Postives = 220/244 (90.16%), Query Frame = 1


Query: 71  FETQERMKQQAAIEKLSLPSNVSYRIVRSYLQHYGYEDTLSAFDMACQSTVPPIYIAQEN 130
           +E QERMKQQ  IEK+SLP NVSY +VRSYLQHYGYEDTL++FD+A ++TVPP+++AQEN
Sbjct: 220 YEAQERMKQQMTIEKISLPPNVSYGLVRSYLQHYGYEDTLNSFDLAGKTTVPPVFVAQEN 279

Query: 131 GFDEQDIVYALNQRKTLRQLIRKGEIDAALGKLSEWYPQIVQDEKSATCFLLHCQKFIEL 190
           GF+EQD VYALNQRKTLRQLIR GEIDAA  KL  W+P IVQD+KS+TCFLLHCQKFIEL
Sbjct: 280 GFNEQDNVYALNQRKTLRQLIRNGEIDAAFDKLRNWHPWIVQDDKSSTCFLLHCQKFIEL 339

Query: 191 VRVGALEEAVKYGRNQLGKFYGLPGFQDLVQDSVALLAYERPQESPVGYLLEDTQREIVA 250
           VRVGALEEAVKYGR +L K++GL GF++LVQD VALLAYE+PQES VGYLLED+QREIVA
Sbjct: 340 VRVGALEEAVKYGRMELAKYFGLAGFEELVQDCVALLAYEKPQESSVGYLLEDSQREIVA 399

Query: 251 DTVNAMVLSTNPNVKNLQGCLHPYLERLLRQLTACCLVRRSLNGDQGEAFQLHRLLNSIE 310
           DTVNAM+LSTNPNVK+L GCLH  LERLLRQLTACCL RRS+NGDQGEAF LHR+LNS +
Sbjct: 400 DTVNAMILSTNPNVKDLHGCLHSCLERLLRQLTACCLERRSMNGDQGEAFHLHRVLNSGK 459

Query: 311 KSKC 315
           K+KC
Sbjct: 460 KAKC 463

The following BLAST results are available for this feature:

BLAST of Cla003877 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GID8_NEMVE	2.0e-12	27.32	Glucose-induced degradation protein 8 homolog OS=Nematostella vectensis GN=v1g24...	[more]
GID8_DANRE	1.9e-10	28.92	Glucose-induced degradation protein 8 homolog OS=Danio rerio GN=gid8 PE=2 SV=1	[more]
GID8_HUMAN	3.2e-10	29.52	Glucose-induced degradation protein 8 homolog OS=Homo sapiens GN=GID8 PE=1 SV=1	[more]
GID8_CHICK	4.2e-10	29.52	Glucose-induced degradation protein 8 homolog OS=Gallus gallus GN=GID8 PE=2 SV=1	[more]
GID8_MOUSE	5.4e-10	29.52	Glucose-induced degradation protein 8 homolog OS=Mus musculus GN=Gid8 PE=1 SV=1	[more]

BLAST of Cla003877 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW89_CUCSA	8.7e-132	82.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G651700 PE=4 SV=1	[more]
V4V742_9ROSI	2.0e-107	78.69	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001078mg PE=4 SV=1	[more]
A0A067H8C4_CITSI	2.0e-107	78.69	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012451mg PE=4 SV=1	[more]
M5XYJ8_PRUPE	2.6e-107	79.51	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005466mg PE=4 SV=1	[more]
A0A061FJN0_THECC	9.7e-107	79.92	SPla/RYanodine receptor domain-containing protein isoform 1 OS=Theobroma cacao G...	[more]

BLAST of Cla003877 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778708086\|ref\|XP_011656119.1\|	1.3e-131	82.03	PREDICTED: ran-binding protein 10 [Cucumis sativus]	[more]
gi\|659119463\|ref\|XP_008459671.1\|	1.3e-131	82.03	PREDICTED: ran-binding protein 10 isoform X1 [Cucumis melo]	[more]
gi\|645224263\|ref\|XP_008219025.1\|	3.3e-108	79.51	PREDICTED: ran-binding protein 10 [Prunus mume]	[more]
gi\|567884211\|ref\|XP_006434664.1\|	2.8e-107	78.69	hypothetical protein CICLE_v10001078mg [Citrus clementina]	[more]
gi\|568838480\|ref\|XP_006473239.1\|	2.8e-107	78.69	PREDICTED: ran-binding protein 10 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006594	LisH
IPR006595	CTLH_C
IPR013144	CRA_dom
IPR024964	CTLH/CRA

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003735	structural constituent of ribosome

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU08553	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU76627	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla003877	Cla003877.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU08553	WMU08553	transcribed_cluster
WMU76627	WMU76627	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006594	LIS1 homology motif	PROFILE	PS50896	LISH	coord: 89..121 score:
IPR006595	CTLH, C-terminal LisH motif	SMART	SM00668	ctlh	coord: 140..198 score: 2.1
IPR006595	CTLH, C-terminal LisH motif	PROFILE	PS50897	CTLH	coord: 140..198 score: 13
IPR013144	CRA domain	SMART	SM00757	toby_final6	coord: 194..295 score: 3.2
IPR024964	CTLH/CRA C-terminal to LisH motif domain	PFAM	PF10607	CLTH	coord: 142..285 score: 1.4
None	No IPR available	PANTHER	PTHR12864	RAN BINDING PROTEIN 9-RELATED	coord: 71..307 score: 3.5
None	No IPR available	PANTHER	PTHR12864:SF14	RAN-BINDING PROTEINS 9/10 HOMOLOG	coord: 71..307 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla003877	ClCG08G000300	Watermelon (Charleston Gray)	wcgwmB404

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla003877	Wax gourd	wgowmB123
Cla003877	Cucumber (Gy14) v1	cgywmB051
Cla003877	Cucurbita maxima (Rimu)	cmawmB016
Cla003877	Cucurbita moschata (Rifu)	cmowmB015
Cla003877	Wild cucumber (PI 183967)	cpiwmB386
Cla003877	Melon (DHL92) v3.5.1	mewmB010
Cla003877	Cucumber (Chinese Long) v2	cuwmB381
Cla003877	Cucurbita pepo (Zucchini)	cpewmB762
Cla003877	Bottle gourd (USVL1VR-Ls)	lsiwmB469
Cla003877	Cucumber (Gy14) v2	cgybwmB353
Cla003877	Melon (DHL92) v3.6.1	medwmB008
Cla003877	Cucumber (Chinese Long) v3	cucwmB403
Cla003877	Watermelon (97103) v2	wmwmbB104