Cla003821 (gene) Watermelon (97103) v1

Overview
NameCla003821
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionBHLH transcription factor-like protein (AHRD V1 ***- Q5ZAK6_ORYSJ); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
LocationChr10 : 6992378 .. 6995486 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGACGTGAGACCCAGTTATTTTCCGGCGTCGTACAACACCGCTGCAGGTTTCGCCGATAAATCAAAGGTAAAAAAGAAAAAAAAGAAAAAGAAAAAGAAAAAGAAAAGAGTGATGATTAGGGTTTTGGATTAGGATGATTGAAAATCTTGATTCTAATTTTCATTTTTTAAGAAAAGCTGACAGAAAGTATTAATGGAAAAAGGGTATTTATTAATTTGTTGATTTAAATGAGTAACAGAATATATCGGAGGTTGGTGATTCGGTAACAACAGTAGGAAAAAAAAGTGGAAATGATCACAATCAGCAATCCGCCGCTGCTAAAAGGCCTCGAAATGAAACTCCTTCGCCATTGCCAGCTTTTAAGGTAATTTCTTATTTATTTATTTATTTTTGGAATTTAGAAGAGAGTAATTAATTATATTAATATTAAACAAGGAAAAAATGTATTATTTTGTTATGTGTATTGGTTGCAATTGCAGGTGAGGAAAGAGAAGATGGGGGACAGAATCACTGCGCTCCAACAACTCGTTTCACCTTTCGGAAAGGTATTTTCTATTTTCTATTTTCTATTTTCTATTTTTTCTCTCCACTTCTTCCTTCTTATTTCATTTTTTTTCCCTTTTTCTTTTCAACTTATTTCTATTTTCTGTGAAGGTTTTCCTTTTAATCTTTCAAATATTTCATCACATAGTTTACACCAAGTTGAGCTTACTTTTGTTTAATTTCCTGTTTTTTTTAAACATTTTTTTATTATTTCAAATTAAGTTGTATTTAGTTTTTGAAAATTAAGCCTACCAACACTATTTTTACCTATAAAATACTTTATTTTATTATATTTACTTTAAACTCATGTTATACAAATTTTGAAAAACTTAAAAAAAAAAAAAGGTGACTTTCATAAACTTGATTTGGTTTTTTAGAATTTGACTAAGAGTGTGTTTGAAATATCTTTTAAACACTTCTTATCAAAAGTATTTAAATGAAAGTAAAATTTTAAAAAACGTTTATTTTTTAAGTTAATCCAAAGAGCTAAATAAAAAAAGAATAAGGAAAATGTGAATACCATAGTGTCAAATTTAGGAAAAATTAAGCATACATTTTAAAAATAGAAACTAAAAAAATATTGTTATCATAGCAAAAAAAATTAGTTTTTTTTTAAAATTTTAATTTAGAATTCAAGTGTATTTTTAAGAAATTGAAAATGAGGAAACAGTATAATTACATTAAAAAAAATAATGATAAAGATTAATATAAGTATTTAATATTGACTAATACTCGAGTAGTCCACATTGCACTCATGTTTATGCATCTCCTTCGATCAGAAACAAAAACATTCACTAGAAAAAAAGGGTTTTAAATTTGAAATTGAATTAGATTTAGGGTATGTATGAATGTTTGGAATAAACCACTAGAATAATTTAATGGCTAGAATCTGTTTCTTATTATTGTGGAAGAAATATAGAGGTTTTTAATATATTGAATGTTTGTGATTTTGGGTCAGACTGATACAGCCTCAGTGCTGTCTGAAGCAATTGAATACATAAAGTTCCTCCATGAACAAGTCAGTGTAAGTGCTTATTGTATATCAGTTTTATTATCATTATTATGTTAATGATTACCCTTCAATATGAATTCTAAATATTAATTTCAGTGGGTTTTTTTTTCTTTTTTTCTTTTTTTTTTTTTATATATCTCTAATTGTTTTTTGAAAATTTAGGTTTTGAGCACTCCATATTTGAAGAGTGGAGCTGCAGTACAGCAACAACATCAGCAGCAGGTAAAAGTATTGTTCTCTTTTCAAGATTCTACCTTCCATTAATTAATTACTACATATTATTAATTACCTTCTCCAATAATTAAATAATACTAAATATTTAAGGTTTTTTTTTTTTTTTTGAAGTACTATATTATATATTTGAGGTTTAATTACAATTTTTCTGTAACATTTTATGCTTGTCTGTTTTGGTTATTAGGTTCTTATTATTACCATTTTGTTCTCCGAAAACAACTTCTTATTATTATTATTATTATTATTATTAAAAATGATCTTTGAAAATAAACTTGTTGCTTGATAATTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTGTAATAGACTATAGTTTCTAGAAAGTTTTTATTTGTTTTTGATATTCTTTTTCAAGGTAGAGAAGAGAAGAAAGTAACTTAGAAGAAAGAGTTTATTTCACTTTTTTTTAATCAAATTTAAGAGATAGGTAACTTTTTTATTTTATTTTATTTTTTTTAAATTTATAAAATCTGGGAATGGTTTCTATATATATTAAAAAAAAAAATTGATAGAAAAGCTTTATTTTTAAGCTTAGAGGAAGAGCAAGAGGCAAAAATCATTATAAACCAACCTTATTTCCAAAAATAAAGGTTAATAATCCACTTTACTTTTTGGCTTTTCATTTTGAAAAATTAAACTTATAAAAACTACTTAGTTTTTTTTTTCTTTATTTTTTTCTTTACACTTTTAAAATCTTAGCAGATTAAAAAACTAATAATAAAAAAAAATTAAAAAAAAAAAAAAGAACAAGATTTTCACAATTTCAAAAGCAAATATATGAAAGTAGATTATTAAAAAAAAAAAAAAAAGTTTATTAAATGAACACAAATTATAAAACCCAAAAGAGAACCCCATTGAAAGCTTAGTAATATCTTTTTAAAAAACATTTCGAAATAGAATTGTTCCAAGTGAAAGCACCTGTTCTACTAGAATGACTTTTAAAAGAAACAATAATACTTTGAAGTGTTTTAAATCATTTTCTAAACTAATGTTAATTAGAATCTTCAAAAACTCACTTTAAATTATCTAACGAAATACTATAAAATTATGAAAAGCTACTTTTAATGGGGAGAAACTAATAATATAATACAAATTCAAAACAAGAATTTAGTTAATTTTATTATTTTTGTAAGCAGAGATGTGAGAAATCAAAGGAAGGAGAAGGAGGAAAGCAAGATCTAAGAAGCAGAGGGCTTTGTTTAGTTCCAGTTTCAAGTACATTTCCAGTCACTCACGAAACCACAGTTGATTTTTGGACTCCAACCTTCGGAGGAACTTTCAGATAA

mRNA sequence

ATGAAAGACGTGAGACCCAGTTATTTTCCGGCGTCGTACAACACCGCTGCAGGTTTCGCCGATAAATCAAAGAATATATCGGAGGTTGGTGATTCGGTAACAACAGTAGGAAAAAAAAGTGGAAATGATCACAATCAGCAATCCGCCGCTGCTAAAAGGCCTCGAAATGAAACTCCTTCGCCATTGCCAGCTTTTAAGGTGAGGAAAGAGAAGATGGGGGACAGAATCACTGCGCTCCAACAACTCGTTTCACCTTTCGGAAAGACTGATACAGCCTCAGTGCTGTCTGAAGCAATTGAATACATAAAGTTCCTCCATGAACAAGTCAGTGTTTTGAGCACTCCATATTTGAAGAGTGGAGCTGCAGTACAGCAACAACATCAGCAGCAGAGATGTGAGAAATCAAAGGAAGGAGAAGGAGGAAAGCAAGATCTAAGAAGCAGAGGGCTTTGTTTAGTTCCAGTTTCAAGTACATTTCCAGTCACTCACGAAACCACAGTTGATTTTTGGACTCCAACCTTCGGAGGAACTTTCAGATAA

Coding sequence (CDS)

ATGAAAGACGTGAGACCCAGTTATTTTCCGGCGTCGTACAACACCGCTGCAGGTTTCGCCGATAAATCAAAGAATATATCGGAGGTTGGTGATTCGGTAACAACAGTAGGAAAAAAAAGTGGAAATGATCACAATCAGCAATCCGCCGCTGCTAAAAGGCCTCGAAATGAAACTCCTTCGCCATTGCCAGCTTTTAAGGTGAGGAAAGAGAAGATGGGGGACAGAATCACTGCGCTCCAACAACTCGTTTCACCTTTCGGAAAGACTGATACAGCCTCAGTGCTGTCTGAAGCAATTGAATACATAAAGTTCCTCCATGAACAAGTCAGTGTTTTGAGCACTCCATATTTGAAGAGTGGAGCTGCAGTACAGCAACAACATCAGCAGCAGAGATGTGAGAAATCAAAGGAAGGAGAAGGAGGAAAGCAAGATCTAAGAAGCAGAGGGCTTTGTTTAGTTCCAGTTTCAAGTACATTTCCAGTCACTCACGAAACCACAGTTGATTTTTGGACTCCAACCTTCGGAGGAACTTTCAGATAA

Protein sequence

MKDVRPSYFPASYNTAAGFADKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSGAAVQQQHQQQRCEKSKEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR
Homology
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BLAST of Cla003821 vs. Swiss-Prot
Match: BH123_ARATH (Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.7e-53
Identity = 115/180 (63.89%), Postives = 127/180 (70.56%), Query Frame = 1 

Query: 3   DVRPSYFPASYNTAA---GFADKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNETP 62
           D   ++FPA          F ++ KNISE+ DS +   K+ GNDH     AAKR ++E  
Sbjct: 282 DASSNFFPALQPPQIHPQSFDEQPKNISEIRDSSSNEVKRGGNDHQP---AAKRAKSEAA 341

Query: 63  SPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKS 122
           SP PAFK RKEKMGDRI ALQQLVSPFGKTD ASVLSEAIEYIKFLH+QVS LS PY+KS
Sbjct: 342 SPSPAFK-RKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKS 401

Query: 123 GAAVQQQHQQQRCEKSKEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR 180
           GA++Q Q      E     E    DLRSRGLCLVPVSSTFPVTH+TTVDFWTPTFGGTFR
Sbjct: 402 GASLQHQQSDHSTELEVSEE---PDLRSRGLCLVPVSSTFPVTHDTTVDFWTPTFGGTFR 454

[Close]
BLAST of Cla003821 vs. Swiss-Prot
Match: BH112_ARATH (Transcription factor bHLH112 OS=Arabidopsis thaliana GN=BHLH112 PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.5e-46
Identity = 97/156 (62.18%), Postives = 112/156 (71.79%), Query Frame = 1 

Query: 21  DKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNETPSPLPAFKVRKEKMGDRITALQ 80
           DK+KN+       T    +S        +AAK+PR  TPSPLP FKVRKE + D+IT+LQ
Sbjct: 241 DKTKNLK------TRAQSESLKRAKDNESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQ 300

Query: 81  QLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSGAAVQQQHQQQRCEKSKEGEG 140
           QLVSPFGKTDTASVL EAIEYIKFLH+QV+VLSTPY+K GA+ QQQ Q     KS++ E 
Sbjct: 301 QLVSPFGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQQQISGKSKSQD-EN 360

Query: 141 GKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGG 177
              +LR  GLCLVP+SSTFPV +ETT DFWTPTFGG
Sbjct: 361 ENHELRGHGLCLVPISSTFPVANETTADFWTPTFGG 389

[Close]
BLAST of Cla003821 vs. Swiss-Prot
Match: BH114_ARATH (Transcription factor bHLH114 OS=Arabidopsis thaliana GN=BHLH114 PE=2 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 1.9e-31
Identity = 73/118 (61.86%), Postives = 87/118 (73.73%), Query Frame = 1 

Query: 52  KRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSV 111
           KRPR ET SPLP+FKVRKEK+GDRITALQQLVSPFGKTDTASVL+EA+EYIKFL EQV+V
Sbjct: 159 KRPRLETLSPLPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTV 218

Query: 112 LSTPYLKSGAAVQQQHQQQRCEKSKEGEGGKQ--------DLRSRGLCLVPVSSTFPV 162
           LS P   +  +VQQQ    +   + +GE  +         DL SRGLCL+P+S+++PV
Sbjct: 219 LSNPEQNTIGSVQQQQCSNKKSINTQGEVEEDECSPRRYVDLSSRGLCLMPISASYPV 276

[Close]
BLAST of Cla003821 vs. Swiss-Prot
Match: BH103_ARATH (Transcription factor bHLH103 OS=Arabidopsis thaliana GN=BHLH103 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.9e-31
Identity = 81/159 (50.94%), Postives = 102/159 (64.15%), Query Frame = 1 

Query: 22  KSKNISEVGDSVTT---VGKKSGN-DHNQQSAAAKRPRNETPSPLPAFKVRKEKMGDRIT 81
           K K   +   S+TT     +KSG  +  + S   KRPR ETPS  P+FKVRKEK+GDRIT
Sbjct: 142 KPKEDMQACKSLTTCKRASEKSGELEDIESSQPLKRPRLETPSHFPSFKVRKEKLGDRIT 201

Query: 82  ALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVS--VLSTPYLKSGAAVQQQHQQQRCEKS 141
           ALQQLVSPFGKTDTASVL +AI+YIKFL EQ++  V ++P+L S  + +Q+    +   +
Sbjct: 202 ALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITEKVSTSPHLNSIGSGEQKQWSDKSSNN 261

Query: 142 KEGE--GGKQDLRSRGLCLVPVSSTF--PVTHETTVDFW 171
              +    +QDLRSRGLCL+P+SSTF  P  H  T   W
Sbjct: 262 THNQNCSPRQDLRSRGLCLMPISSTFSTPPQHLDTSSLW 300

[Close]
BLAST of Cla003821 vs. Swiss-Prot
Match: BH133_ARATH (Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 71/162 (43.83%), Postives = 85/162 (52.47%), Query Frame = 1 

Query: 48  SAAAKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHE 107
           S A K+P+ + PS     KVRKEK+G RI +L QLVSPFGKTDTASVLSEAI YI+FLH 
Sbjct: 201 SFANKKPKLQVPSSQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHS 260

Query: 108 QVSVLSTPYLKSGAAVQQQHQ------------------QQRC------------EKSKE 167
           Q+  LS PY  + +     HQ                   + C            +KS  
Sbjct: 261 QIEALSLPYFGTPSRNNMMHQHAQRNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNP 320

Query: 168 GEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR 180
            E   +DLRSRGLCLVP+S T  V  +   D+W P FG T +
Sbjct: 321 NEEPMKDLRSRGLCLVPISCTLQVGSDNGADYWAPAFGTTLQ 362

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BLAST of Cla003821 vs. TrEMBL
Match: A0A0A0L564_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G088430 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 8.3e-87
Identity = 168/180 (93.33%), Postives = 171/180 (95.00%), Query Frame = 1 

Query: 1   MKDVRPSYFPASYNTAAGFADKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNETPS 60
           MK+VRPSYF  SYN AAGF +KSKNISEVGDSVTT  KKSGND+NQQSAAAKRPRNETPS
Sbjct: 261 MKEVRPSYFAPSYNAAAGFTEKSKNISEVGDSVTT--KKSGNDNNQQSAAAKRPRNETPS 320

Query: 61  PLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSG 120
           PLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSG
Sbjct: 321 PLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSG 380

Query: 121 AAVQQQHQQQRCEKS-KEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR 180
           A VQQQHQQQR EKS KEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR
Sbjct: 381 AVVQQQHQQQRNEKSVKEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR 438

[Close]
BLAST of Cla003821 vs. TrEMBL
Match: A0A061F6M7_THECC (Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_031172 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.7e-66
Identity = 139/181 (76.80%), Postives = 149/181 (82.32%), Query Frame = 1 

Query: 1   MKDVRPSYFPASYNT--AAGFADKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNET 60
           M DVRP +FP+         F +K KNISE  DS T V KKSGN+      A+KRPRNET
Sbjct: 288 MTDVRPGFFPSLQTQFPTGNFDEKPKNISEGRDSSTVV-KKSGNE-----PASKRPRNET 347

Query: 61  PSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLK 120
           P+PLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPY+K
Sbjct: 348 PTPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYMK 407

Query: 121 SGAAVQQQHQQQRCEKSKEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTF 180
           SGAA+Q    QQ  EKSK+ EG KQDLRSRGLCLVPVSSTFPVTHE+TVDFWTPTFGGTF
Sbjct: 408 SGAAIQ---HQQSSEKSKDPEGPKQDLRSRGLCLVPVSSTFPVTHESTVDFWTPTFGGTF 459

[Close]
BLAST of Cla003821 vs. TrEMBL
Match: W9SY08_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002935 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.7e-66
Identity = 140/183 (76.50%), Postives = 152/183 (83.06%), Query Frame = 1 

Query: 1   MKDVRPSYFPA---SYNTAAGFADKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNE 60
           MKDVR ++FP     + TA  F +K KNISEV DSV  VGKKSG +    +A+ KRPRN+
Sbjct: 302 MKDVRATFFPTLQPQFQTAT-FDEKPKNISEVRDSVAVVGKKSGGE----AASNKRPRND 361

Query: 61  -TPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPY 120
            TPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQV+VLSTPY
Sbjct: 362 QTPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPY 421

Query: 121 LKSGAAVQQQHQQQRCEKSKEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGG 180
           +KSGA +Q    QQ  EKSK+ E  KQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGG
Sbjct: 422 MKSGAPIQ---HQQNSEKSKDPEDPKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGG 476

[Close]
BLAST of Cla003821 vs. TrEMBL
Match: B9I057_POPTR (Ethylene-responsive family protein OS=Populus trichocarpa GN=POPTR_0011s13320g PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 5.2e-65
Identity = 136/181 (75.14%), Postives = 147/181 (81.22%), Query Frame = 1 

Query: 1   MKDVRPSYFPASYN--TAAGFADKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNET 60
           M DVRPS+FP+     T + F +K KNISEV DS T V KKSG +     A AKRPRNET
Sbjct: 280 MSDVRPSFFPSMQPQFTTSNFDEKPKNISEVRDSNTAV-KKSGGE-----AGAKRPRNET 339

Query: 61  PSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLK 120
           PSP PAFK RKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQV+VL TPY+K
Sbjct: 340 PSPSPAFKARKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLCTPYMK 399

Query: 121 SGAAVQQQHQQQRCEKSKEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTF 180
           +GA +   H QQ  EKS++ EG KQDLRS GLCLVPVSSTFPVTHETTVDFWTPTFGGTF
Sbjct: 400 NGAPI---HHQQSSEKSRDSEGQKQDLRSLGLCLVPVSSTFPVTHETTVDFWTPTFGGTF 451

[Close]
BLAST of Cla003821 vs. TrEMBL
Match: M5WXZ0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023041mg PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.5e-64
Identity = 140/183 (76.50%), Postives = 152/183 (83.06%), Query Frame = 1 

Query: 1   MKDVRPSYFPA---SYNTAAGFADKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNE 60
           MKDVRPS+FP+    Y TA  F +K KNISEV +S   VGKKSG++      A KRPRNE
Sbjct: 281 MKDVRPSFFPSLQPQYPTAR-FEEKPKNISEVQES-GAVGKKSGSE-----TATKRPRNE 340

Query: 61  TPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYL 120
           T SPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQV+VLSTPY+
Sbjct: 341 TSSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVNVLSTPYM 400

Query: 121 KSGAAVQQQHQQQRCEKSKE-GEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGG 180
           KSGAA+Q    QQ  +KSK+  +G KQDLRSRGLCLVPVSSTFPVTH TTVDFWTPTFGG
Sbjct: 401 KSGAAIQ---HQQNSDKSKDPDQGPKQDLRSRGLCLVPVSSTFPVTHGTTVDFWTPTFGG 453

[Close]
BLAST of Cla003821 vs. NCBI nr
Match: gi|778676179|ref|XP_011650539.1| (PREDICTED: transcription factor bHLH123 isoform X2 [Cucumis sativus])

HSP 1 Score: 327.8 bits (839), Expect = 1.2e-86
Identity = 168/180 (93.33%), Postives = 171/180 (95.00%), Query Frame = 1 

Query: 1   MKDVRPSYFPASYNTAAGFADKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNETPS 60
           MK+VRPSYF  SYN AAGF +KSKNISEVGDSVTT  KKSGND+NQQSAAAKRPRNETPS
Sbjct: 260 MKEVRPSYFAPSYNAAAGFTEKSKNISEVGDSVTT--KKSGNDNNQQSAAAKRPRNETPS 319

Query: 61  PLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSG 120
           PLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSG
Sbjct: 320 PLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSG 379

Query: 121 AAVQQQHQQQRCEKS-KEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR 180
           A VQQQHQQQR EKS KEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR
Sbjct: 380 AVVQQQHQQQRNEKSVKEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR 437

[Close]
BLAST of Cla003821 vs. NCBI nr
Match: gi|778676176|ref|XP_004151277.2| (PREDICTED: transcription factor bHLH123 isoform X1 [Cucumis sativus])

HSP 1 Score: 327.8 bits (839), Expect = 1.2e-86
Identity = 168/180 (93.33%), Postives = 171/180 (95.00%), Query Frame = 1 

Query: 1   MKDVRPSYFPASYNTAAGFADKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNETPS 60
           MK+VRPSYF  SYN AAGF +KSKNISEVGDSVTT  KKSGND+NQQSAAAKRPRNETPS
Sbjct: 261 MKEVRPSYFAPSYNAAAGFTEKSKNISEVGDSVTT--KKSGNDNNQQSAAAKRPRNETPS 320

Query: 61  PLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSG 120
           PLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSG
Sbjct: 321 PLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSG 380

Query: 121 AAVQQQHQQQRCEKS-KEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR 180
           A VQQQHQQQR EKS KEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR
Sbjct: 381 AVVQQQHQQQRNEKSVKEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR 438

[Close]
BLAST of Cla003821 vs. NCBI nr
Match: gi|694329587|ref|XP_009355551.1| (PREDICTED: transcription factor bHLH123-like isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 262.3 bits (669), Expect = 6.1e-67
Identity = 140/181 (77.35%), Postives = 153/181 (84.53%), Query Frame = 1 

Query: 1   MKDVRPSYFPASYNT--AAGFADKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNET 60
           MKDVRPS+FP+       A F +K KNISEV +S   VGKKSG++     AA+KRPRNET
Sbjct: 283 MKDVRPSFFPSLQPQFPTARFDEKPKNISEVQES-GAVGKKSGSE-----AASKRPRNET 342

Query: 61  PSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLK 120
            SPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQV+VLSTPY+K
Sbjct: 343 SSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVNVLSTPYMK 402

Query: 121 SGAAVQQQHQQQRCEKSKEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTF 180
           SGA +  QHQQQ  +K K+ +G KQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTF
Sbjct: 403 SGAVI--QHQQQNSDKVKDPDGPKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTF 455

[Close]
BLAST of Cla003821 vs. NCBI nr
Match: gi|657987754|ref|XP_008386041.1| (PREDICTED: transcription factor bHLH123-like [Malus domestica])

HSP 1 Score: 260.4 bits (664), Expect = 2.3e-66
Identity = 139/181 (76.80%), Postives = 152/181 (83.98%), Query Frame = 1 

Query: 1   MKDVRPSYFPASYNT--AAGFADKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNET 60
           MKDVRPS+FP+       A F +K KNISEV +S   VGKKSG++     AA+KRPRNE 
Sbjct: 283 MKDVRPSFFPSLQPQFPTARFDEKPKNISEVQES-GAVGKKSGSE-----AASKRPRNEA 342

Query: 61  PSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLK 120
            SPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQV+VLSTPY+K
Sbjct: 343 SSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVNVLSTPYMK 402

Query: 121 SGAAVQQQHQQQRCEKSKEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTF 180
           SGA +  QHQQQ  +K K+ +G KQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTF
Sbjct: 403 SGAVI--QHQQQNSDKVKDPDGPKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTF 455

[Close]
BLAST of Cla003821 vs. NCBI nr
Match: gi|703158771|ref|XP_010112076.1| (hypothetical protein L484_002935 [Morus notabilis])

HSP 1 Score: 258.8 bits (660), Expect = 6.8e-66
Identity = 140/183 (76.50%), Postives = 152/183 (83.06%), Query Frame = 1 

Query: 1   MKDVRPSYFPA---SYNTAAGFADKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNE 60
           MKDVR ++FP     + TA  F +K KNISEV DSV  VGKKSG +    +A+ KRPRN+
Sbjct: 302 MKDVRATFFPTLQPQFQTAT-FDEKPKNISEVRDSVAVVGKKSGGE----AASNKRPRND 361

Query: 61  -TPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPY 120
            TPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQV+VLSTPY
Sbjct: 362 QTPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPY 421

Query: 121 LKSGAAVQQQHQQQRCEKSKEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGG 180
           +KSGA +Q    QQ  EKSK+ E  KQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGG
Sbjct: 422 MKSGAPIQ---HQQNSEKSKDPEDPKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGG 476

The following BLAST results are available for this feature:
BLAST of Cla003821 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH123_ARATH1.7e-5363.89Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123 PE=2 SV=1[more]
BH112_ARATH3.5e-4662.18Transcription factor bHLH112 OS=Arabidopsis thaliana GN=BHLH112 PE=2 SV=1[more]
BH114_ARATH1.9e-3161.86Transcription factor bHLH114 OS=Arabidopsis thaliana GN=BHLH114 PE=2 SV=2[more]
BH103_ARATH1.9e-3150.94Transcription factor bHLH103 OS=Arabidopsis thaliana GN=BHLH103 PE=2 SV=1[more]
BH133_ARATH1.3e-2743.83Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133 PE=2 SV=1[more]
BLAST of Cla003821 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L564_CUCSA8.3e-8793.33Uncharacterized protein OS=Cucumis sativus GN=Csa_3G088430 PE=4 SV=1[more]
A0A061F6M7_THECC4.7e-6676.80Basic helix-loop-helix DNA-binding superfamily protein OS=Theobroma cacao GN=TCM... [more]
W9SY08_9ROSA4.7e-6676.50Uncharacterized protein OS=Morus notabilis GN=L484_002935 PE=4 SV=1[more]
B9I057_POPTR5.2e-6575.14Ethylene-responsive family protein OS=Populus trichocarpa GN=POPTR_0011s13320g P... [more]
M5WXZ0_PRUPE1.5e-6476.50Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023041mg PE=4 SV=1[more]
BLAST of Cla003821 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778676179|ref|XP_011650539.1|1.2e-8693.33PREDICTED: transcription factor bHLH123 isoform X2 [Cucumis sativus][more]
gi|778676176|ref|XP_004151277.2|1.2e-8693.33PREDICTED: transcription factor bHLH123 isoform X1 [Cucumis sativus][more]
gi|694329587|ref|XP_009355551.1|6.1e-6777.35PREDICTED: transcription factor bHLH123-like isoform X1 [Pyrus x bretschneideri][more]
gi|657987754|ref|XP_008386041.1|2.3e-6676.80PREDICTED: transcription factor bHLH123-like [Malus domestica][more]
gi|703158771|ref|XP_010112076.1|6.8e-6676.50hypothetical protein L484_002935 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045944 positive regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003821Cla003821.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 70..113
score: 5.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 67..111
score: 0.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 56..105
score: 12
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 66..121
score: 2.75
NoneNo IPR availablePANTHERPTHR16223FAMILY NOT NAMEDcoord: 24..179
score: 5.2E
NoneNo IPR availablePANTHERPTHR16223:SF46TRANSCRIPTION FACTOR BHLH123coord: 24..179
score: 5.2E