Cla003806 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAAGAATTCTGTAATAACACAATTAACTTACTTTGGTGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGGGGGGGGGGGGGGGGGGGGGGGTGGTTGGTAAATTTCTCTACTTGGGAATTTATTATTATGGTAACTTTTAACTAATTCTATCAAAAGTTTGTTTGTTTGTTTGTTTTGTTTTTTTCCTTCAATTTTATTTATTTATTTATTTTTAAATGATATGGATATTCTTTTGAGCTTTATCATAAAGATAGTAAGAATTATGATTTTGACGGAAATCTTTTCAGGTTTGTGGGCTCAGCTAGACAATTGGCCAAGGCGTTGGAAGTGCCATTAGTAAATGACTTGGGATATACGAAGAGATACGTTCGGTGCCTTCAGGTAATGTTCTATATTGACTAGGATGAAAATATTAATAACTCAAATTTACAGATATCTTGGCAGATATTTAAATATCATTGGGCATTCTGGAAAATATCACACAGATATCACAGAAATTTGTTGAAATTTTGTTTCTTAATGAAACATTTAAGAAAACAAGTCCTAAGACATGTTAAACCAAACAAATACATCATCTAACAATAGTGAGATATATTTTTGGGTTGTAGACAACCATTAATATGTCATTGATAAATGTATAAGAAAGACAATGAAGGAGTGGTTGAGACTGATTTTCGATATGATTTGTGTATGGATTTGTGCCCTTAAATTATTAGCTTAACTGAATGACTCATGCTACAACTTTTTAAAGTGAGAAGAAATCAAGGTATTCGTCGGTAGTAAGGAGAGAAGAAAAGCTGCAAAATATCACAGATATCAGCAAAATATCGTGGATATTAGGTAAAATATCGACAAGTATAGGTAAATTATTGATAGAATATAGCAAATTTTTCTGTCAATGGTAAAAAAAGAGATGTCAGTGGAACATTGACGATGTTTTGGTCAATAGCAGTGATATTTTTAAATTATTATTATTATTTTCTATTTTTTCCGGATAAGAAGTAGCGGTGATTTTTTCATCCATGCTTCCATGTTCTTTCTTTGAATTGAAAACTTCAGTTTTTCTGCCTGCAGTGTCTGGATTAGATTGGAATTTCTGTTGGGTTAGGCTGGTTAGTCAAAACCTTAGTGGTTGTTTTCTTAGTGCAAGGTGAAGACCATTACTCATCGCTTAACTTGCTCATAATTTATACGGCAGAATAGCTTCATTAATTTCCCCCTTCTGGTTTATAGTGAGGCTTGACTATGAACCATTAGGAAATCCAAATTGTTGCTTCAAGTGAAATGTGGCTGGAGGTTGCAACTTGCAACAAGTCTTACATTTTCATACCTGAACAAGGATCGACAGGCATAAGTGACAGTTTTGTGTTCATATTGTTAAAAGTGGTACTTTTACGTTTGGAAAAAAAAAATAATAGTCAAGGTGGTTCTAGGCGCTAGAAATGCGACCTTGAATGATCTTGTCTGCTTCTTATTTGGGCGCTAGAAGTTAGTGCCTGCCTAATTATTGTTTTGGTTCCAATTTTTATTCATCTATTTATTTATTTTTTTAATGAATATTTTATATATCTTTTACCACTTATTCTCTCTTTACCAGAAATTTCTATAATAACTTCCCAAGTCTTGTCATTAATTCTCAACATAGCTTTTAGTGATGTGATCTAGGAGTTCTTTCTCCCTCTGCCGTTTTAAGTGGAACTTTTTTTTTTCTTTTTTTTTTTTTTAATGGAAAACGGACGTTTGTGCTTTGTCATGGGGGTCGAGAGATTAGAGGGGTTTTAAGAGGATTGAGAGGGAGTCTTCGTATTTTTGGGCCCTTGTGAGGTTCTTGGTTTCTCCTTGGGCTTCAGTAATGAATTCCTTTTGTAATTATTTGCTTTCCTATTTTGCTTGATTGGAGTCCCTTTCTTTATGGTGTTTCCTTTTGTGGGTTTGATCTTTTTGAATGCGCCAGTATTCTTTCAATTTTTCTCAATGAAACTTGATCTTTTATTTTTTTAAAAAGACATTATTATTATTATTTTGATATCCTATGGTCTAACTGGTTTGTGCACATCTTGACGGATTCTCCATTATTCTTTACATTTTGGATCTGAATTGTATGAAAGAAGGGAATGATTGTTAAACTATATTCATAAGTTGAATATATTATAAACAGTTGATGAACTTTATAAAGAAGTTCAGAATCAAATATAATATTCTAAATTACTTTTTCTTAATAAAAGAAACTTATTATTATTAAGTCAAATAAAAAAGAAACTGTTATTGGCCCAAATTTTCTGATGGCTGTCTTTTGGGTACATTGTAGATATCAGAAGTCGTCAATAGTATGAAGGACTTGATAGATTACAGCCAAGAAACTACGACTGGGCCAATTGGTAAGCATAACATTCATTAATATTGTGTTTGTCATTTTACCTTTCGTTAAATCTATCTGCTGGATGCTTCTTTTTAGTTTGTTTATATGCACTGTAGAATACACTTTGACGAGGATTCCAGATTACGTACTGTAGATATTCTTGGAATGGTTTTGTTGTTTCCTTTTTTTCCTCTTCTTTGTGAGTAAAAAGAAAAACTTTTCATTGTGGAAAAATGGTGTCAGCAAAGGGATTCAAGATTAAGTATGGTACAAAATCTACAAAATCTTAGGGGCTTTTCCTTTGGCGGGCTGTGTTTTTCACAAGATGGAGGATCTTTAGTGATATGGAAAGGTTTTGGGAGGAGGTTGAGGCTTCATGATATTTTGTTTCTTTTAGTGAACCACATATTTAGTCTATTTAAAGGTATTAAATGTCTCAAACTTAAGGGACTTTCTCTAGGAAGGGCAAACCTTTGATGGAGGAAGCCACCTAATCAACTGGGAGTGGCCTTTTCTTCTTTAAAGCATGGGAAGCTTGGTATAGGCAACATTAGGATTAAAAAGACTACCATCTTTTCTTAATGACATGGGTTTTCTTCAATGAAGAAAACATCCTATGGAGGAAGGTTGTAAAATCTAAATACAGTGTTTTCCCCTTTATACCTGTCTTTGAAGAATCACTCGGTCTATGGTCCTTTCTTATTTCGAGAACTCTCTTTCTACTTCGTTAGGGTCTCGACATCTATTATTTGATAGGGAAACGATAGATGTTCTAGCTCTAAATCTTTGATTGAACAGTTTTTTTATCCCCAAGAGGAGGGATGTCTTTGGAGTCCATTCAGTGGCTTTTCCAGCACCCCCTTCTTTCGATGGTTTTTTAGTCCTTCCTTGTCAAGTGTTTTATTTATTCCTTATGTGGAAGGTGAAAATGCCCAAGGTTAAGTTTCTCCATGTCGCCTGTTATGCTTGAGAGACTTTAATTTCCTGGATTGGATTTTTGGAAACGTGTCCAATTTGGCAGGGCAGCGGTTGGTGGTGTGTTCTTTGTAAGAGAGTGACTAAGAACCTCGTTCATATTCTTGAGAGATGTGACTTCGTAGGAGGAGTTGGGAGTTATTTCTTTCCTGAGTTTCACTTCTGCCATGTTAGTTTTCAGTTTGGTAGAGAGACAGTTGAGGAATTTCTTCTTCACTCACTCTTTCGTGAGAAAAGATTGTTTTGTAGCATGCAAAGTTTGTGCTATTTTGTGTGGTCTTTGAGGTAGGAGAAATACCAAATTGTTTAGAAAGTTGGAGACATCTTCGAGTGATATTTGGTTCTTTGTTAGGTTTCATTTGTCTTGCTGCAGTTTCAAAGTTATTTTGAAATTATCTTTTAGGTCGTATTTTTAAAGTCCCTTGTAGTTTGCCTCCTTTTTGTGGGCTTTATATTCTTGTATCCTTTCATTTTTCCGAAAGAAGTTGAAGTTTATCCTCAGAAAAAAACTCCATTGTTGGCACAAAAAAGAAAACTTCCCAGTTAGCTCCCAGTTGTTCTGACATGTCATTGCTGAGTATTCATGTGCTGTCAAGTCGAGAATGGTTCGTCATTTATACTTGAGAATGGCTTGTGAATCAGGTCTTGGGAAAATAAAGTACTCCGAACTTCACCTCCATGTTTTCTGTTCCCGAATGCACCTTCGCTAAGAAAAATGAGAAGAAATTCAAGACCTCGGTAACAACATCATGAAGAAGGCATCGCGATAGTAATGTCTTGGTTCAATTATAAAAAATACTCTCTAGAACTTTGCCATTTGTTTAGAAATTACTCTTAGTCTTATAATAGTTGTAATATTACCCTTACCTTACCTTTTATAAAGGAGTAGAAATTCTTTAGAATTTTGAATGAAAATTGGGACTTGGTATTATGTGGTGGTGACCTAGAACCAAAATATGGGTCGTCACCTATTCTAGGTTACCACACACATTGTTTTTCGTTCCAACTTTTATCTGAAATTTGGAAGGATTTCTACCTCAAGATCAATATTAAATGAGAAGTAATTTGAGACCTTGGTAGCAACATTAGGTCATCGACAGCTCAACCATATAAGACTTTTATACTGTACAAAACCTTCAGTCTGACTTAATAATAATGCTTGGATTCTCAACTTTATAATTCATATGCTTGCACATGTAAGATTTAGAAGATTGATTATTTAAAATACTTGGATAGTAATTGAGAAGGGAAAATATATATAAATATATATATTATTAGCTCAATGTCTGTTTCATCACATTACTCAGTCTAAATGCCCACTTTGTTCTTGCGACTGTTTGCAGAGAGTTTGGCAAAGTTTCCGCGGAAGACGAATGCTTCACCAGGCTTCCACAGCCAAGCTCAAAATATGGAGCAACAATTACCTCAGCCGCAGCAAACAATTGATCAAAACGCAAATGGCGACCAAAGCTCTGCTCAGGCTGCTTCTATGCAGCTTGCTGCTAACAATGGTGTTCCAAGTGCAAATAACTCTGGTAATCCAGCGTCAACCTCATCCCCTGCCAGTACCATTGTTGGGTTACTCCACCAGAACTCCATGAACTCCAGACAGCAGAACTCTATCAACAGCGCTGGCAGCCCTTATGCCGGAAATTCTGCGCAAATATCGTCTCCAGGTTCCTCCACCACGATTGCTCAGGCACAAGCTAACTCCTCGTTCCAATCGCCTACATTGTCCTCACCTAACAATCACCCACAATCATCAATTGGCACTGCAACTACTAATCACATGAGTGCCACTAATTCTCCGGCAAATGTTCCCTTGCAACAGCCAACACAATCCTCAGATGCTGATCAAAACGATTCCCAAAGTTCCGTACAAAAGATTATTCAGGAATACATGATGTCGAATCATCTAAGCGGGATGAACACAATGACTGGTGTATCCTCTATAGGAGATGAGGCGAAAACTGTTAACGGGATGTTGCCAGGAAACAACATTATGAGTCTCAATGGACGGAATGGACTCGTCGGGACTGGAACTGCTAATGGCGTTCCTGGGATCAGGAATGCGGGATATGGCTCAATGAGTGGGGGACTTGCTCAGGCTTCTATGGTCAATGGAATGAAGCCGGCAATGGGAAATAACTCGATTTCGAACGGGAGAATCGGGATGGCATCATTGGCTCGAGGACAGAGCATAAATCATCAAGATTTGGGGGACCAGCTTCTTAATGGACTTGGAGCTGTGAATGGATTTAATAATCTTCAATTCGATTATTGA ATGGAAAAAGAATTCTATAGTAAGAATTATGATTTTGACGGAAATCTTTTCAGGTTTGTGGGCTCAGCTAGACAATTGGCCAAGGCGTTGGAAGTGCCATTAGTAAATGACTTGGGATATACGAAGAGATACGTTCGGTGCCTTCAGATATCAGAAGTCGTCAATAGTATGAAGGACTTGATAGATTACAGCCAAGAAACTACGACTGGGCCAATTGAGAGTTTGGCAAAGTTTCCGCGGAAGACGAATGCTTCACCAGGCTTCCACAGCCAAGCTCAAAATATGGAGCAACAATTACCTCAGCCGCAGCAAACAATTGATCAAAACGCAAATGGCGACCAAAGCTCTGCTCAGGCTGCTTCTATGCAGCTTGCTGCTAACAATGGTGTTCCAAGTGCAAATAACTCTGGTAATCCAGCGTCAACCTCATCCCCTGCCAGTACCATTGTTGGGTTACTCCACCAGAACTCCATGAACTCCAGACAGCAGAACTCTATCAACAGCGCTGGCAGCCCTTATGCCGGAAATTCTGCGCAAATATCGTCTCCAGGTTCCTCCACCACGATTGCTCAGGCACAAGCTAACTCCTCGTTCCAATCGCCTACATTGTCCTCACCTAACAATCACCCACAATCATCAATTGGCACTGCAACTACTAATCACATGAGTGCCACTAATTCTCCGGCAAATGTTCCCTTGCAACAGCCAACACAATCCTCAGATGCTGATCAAAACGATTCCCAAAGTTCCGTACAAAAGATTATTCAGGAATACATGATGTCGAATCATCTAAGCGGGATGAACACAATGACTGGTGTATCCTCTATAGGAGATGAGGCGAAAACTGTTAACGGGATGTTGCCAGGAAACAACATTATGAGTCTCAATGGACGGAATGGACTCGTCGGGACTGGAACTGCTAATGGCGTTCCTGGGATCAGGAATGCGGGATATGGCTCAATGAGTGGGGGACTTGCTCAGGCTTCTATGGTCAATGGAATGAAGCCGGCAATGGGAAATAACTCGATTTCGAACGGGAGAATCGGGATGGCATCATTGGCTCGAGGACAGAGCATAAATCATCAAGATTTGGGGGACCAGCTTCTTAATGGACTTGGAGCTGTGAATGGATTTAATAATCTTCAATTCGATTATTGA ATGGAAAAAGAATTCTATAGTAAGAATTATGATTTTGACGGAAATCTTTTCAGGTTTGTGGGCTCAGCTAGACAATTGGCCAAGGCGTTGGAAGTGCCATTAGTAAATGACTTGGGATATACGAAGAGATACGTTCGGTGCCTTCAGATATCAGAAGTCGTCAATAGTATGAAGGACTTGATAGATTACAGCCAAGAAACTACGACTGGGCCAATTGAGAGTTTGGCAAAGTTTCCGCGGAAGACGAATGCTTCACCAGGCTTCCACAGCCAAGCTCAAAATATGGAGCAACAATTACCTCAGCCGCAGCAAACAATTGATCAAAACGCAAATGGCGACCAAAGCTCTGCTCAGGCTGCTTCTATGCAGCTTGCTGCTAACAATGGTGTTCCAAGTGCAAATAACTCTGGTAATCCAGCGTCAACCTCATCCCCTGCCAGTACCATTGTTGGGTTACTCCACCAGAACTCCATGAACTCCAGACAGCAGAACTCTATCAACAGCGCTGGCAGCCCTTATGCCGGAAATTCTGCGCAAATATCGTCTCCAGGTTCCTCCACCACGATTGCTCAGGCACAAGCTAACTCCTCGTTCCAATCGCCTACATTGTCCTCACCTAACAATCACCCACAATCATCAATTGGCACTGCAACTACTAATCACATGAGTGCCACTAATTCTCCGGCAAATGTTCCCTTGCAACAGCCAACACAATCCTCAGATGCTGATCAAAACGATTCCCAAAGTTCCGTACAAAAGATTATTCAGGAATACATGATGTCGAATCATCTAAGCGGGATGAACACAATGACTGGTGTATCCTCTATAGGAGATGAGGCGAAAACTGTTAACGGGATGTTGCCAGGAAACAACATTATGAGTCTCAATGGACGGAATGGACTCGTCGGGACTGGAACTGCTAATGGCGTTCCTGGGATCAGGAATGCGGGATATGGCTCAATGAGTGGGGGACTTGCTCAGGCTTCTATGGTCAATGGAATGAAGCCGGCAATGGGAAATAACTCGATTTCGAACGGGAGAATCGGGATGGCATCATTGGCTCGAGGACAGAGCATAAATCATCAAGATTTGGGGGACCAGCTTCTTAATGGACTTGGAGCTGTGAATGGATTTAATAATCTTCAATTCGATTATTGA MEKEFYSKNYDFDGNLFRFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSQETTTGPIESLAKFPRKTNASPGFHSQAQNMEQQLPQPQQTIDQNANGDQSSAQAASMQLAANNGVPSANNSGNPASTSSPASTIVGLLHQNSMNSRQQNSINSAGSPYAGNSAQISSPGSSTTIAQAQANSSFQSPTLSSPNNHPQSSIGTATTNHMSATNSPANVPLQQPTQSSDADQNDSQSSVQKIIQEYMMSNHLSGMNTMTGVSSIGDEAKTVNGMLPGNNIMSLNGRNGLVGTGTANGVPGIRNAGYGSMSGGLAQASMVNGMKPAMGNNSISNGRIGMASLARGQSINHQDLGDQLLNGLGAVNGFNNLQFDY
BLAST of Cla003806 vs. Swiss-Prot
Match: SEUSS_ARATH (Transcriptional corepressor SEUSS OS=Arabidopsis thaliana GN=SEU PE=1 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 1.2e-78 Identity = 194/404 (48.02%), Postives = 233/404 (57.67%), Query Frame = 1
BLAST of Cla003806 vs. Swiss-Prot
Match: SLK2_ARATH (Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana GN=SLK2 PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 4.8e-24 Identity = 104/351 (29.63%), Postives = 152/351 (43.30%), Query Frame = 1
BLAST of Cla003806 vs. Swiss-Prot
Match: SLK3_ARATH (Probable transcriptional regulator SLK3 OS=Arabidopsis thaliana GN=SLK3 PE=3 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.9e-20 Identity = 82/255 (32.16%), Postives = 121/255 (47.45%), Query Frame = 1
BLAST of Cla003806 vs. Swiss-Prot
Match: SLK1_ARATH (Probable transcriptional regulator SLK1 OS=Arabidopsis thaliana GN=SLK1 PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.8e-15 Identity = 72/243 (29.63%), Postives = 107/243 (44.03%), Query Frame = 1
BLAST of Cla003806 vs. Swiss-Prot
Match: TPRXL_HUMAN (Putative protein TPRXL OS=Homo sapiens GN=TPRXL PE=5 SV=2) HSP 1 Score: 57.8 bits (138), Expect = 3.1e-07 Identity = 38/140 (27.14%), Postives = 75/140 (53.57%), Query Frame = 1
HSP 2 Score: 55.8 bits (133), Expect = 1.2e-06 Identity = 37/140 (26.43%), Postives = 77/140 (55.00%), Query Frame = 1
HSP 3 Score: 46.6 bits (109), Expect = 7.1e-04 Identity = 31/136 (22.79%), Postives = 72/136 (52.94%), Query Frame = 1
HSP 4 Score: 42.4 bits (98), Expect = 1.3e-02 Identity = 36/150 (24.00%), Postives = 66/150 (44.00%), Query Frame = 1
BLAST of Cla003806 vs. TrEMBL
Match: A0A0A0KH70_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G397700 PE=4 SV=1) HSP 1 Score: 647.9 bits (1670), Expect = 7.8e-183 Identity = 336/380 (88.42%), Postives = 351/380 (92.37%), Query Frame = 1
BLAST of Cla003806 vs. TrEMBL
Match: B9GTN7_POPTR (SEUSS family protein OS=Populus trichocarpa GN=POPTR_0002s07380g PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 6.9e-131 Identity = 258/378 (68.25%), Postives = 299/378 (79.10%), Query Frame = 1
BLAST of Cla003806 vs. TrEMBL
Match: F6H093_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15320 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 6.9e-131 Identity = 257/383 (67.10%), Postives = 296/383 (77.28%), Query Frame = 1
BLAST of Cla003806 vs. TrEMBL
Match: B9S2M5_RICCO (Transcriptional corepressor SEUSS, putative OS=Ricinus communis GN=RCOM_0559370 PE=4 SV=1) HSP 1 Score: 470.7 bits (1210), Expect = 1.7e-129 Identity = 250/379 (65.96%), Postives = 291/379 (76.78%), Query Frame = 1
BLAST of Cla003806 vs. TrEMBL
Match: A0A061FI38_THECC (SEUSS transcriptional co-regulator isoform 1 OS=Theobroma cacao GN=TCM_035392 PE=4 SV=1) HSP 1 Score: 469.5 bits (1207), Expect = 3.8e-129 Identity = 249/391 (63.68%), Postives = 299/391 (76.47%), Query Frame = 1
BLAST of Cla003806 vs. NCBI nr
Match: gi|778715729|ref|XP_011657440.1| (PREDICTED: transcriptional corepressor SEUSS [Cucumis sativus]) HSP 1 Score: 647.9 bits (1670), Expect = 1.1e-182 Identity = 336/380 (88.42%), Postives = 351/380 (92.37%), Query Frame = 1
BLAST of Cla003806 vs. NCBI nr
Match: gi|659133355|ref|XP_008466695.1| (PREDICTED: transcriptional corepressor SEUSS-like [Cucumis melo]) HSP 1 Score: 647.9 bits (1670), Expect = 1.1e-182 Identity = 337/380 (88.68%), Postives = 350/380 (92.11%), Query Frame = 1
BLAST of Cla003806 vs. NCBI nr
Match: gi|224062956|ref|XP_002300947.1| (SEUSS family protein [Populus trichocarpa]) HSP 1 Score: 475.3 bits (1222), Expect = 9.9e-131 Identity = 258/378 (68.25%), Postives = 299/378 (79.10%), Query Frame = 1
BLAST of Cla003806 vs. NCBI nr
Match: gi|225457805|ref|XP_002265920.1| (PREDICTED: transcriptional corepressor SEUSS [Vitis vinifera]) HSP 1 Score: 475.3 bits (1222), Expect = 9.9e-131 Identity = 257/383 (67.10%), Postives = 296/383 (77.28%), Query Frame = 1
BLAST of Cla003806 vs. NCBI nr
Match: gi|645264478|ref|XP_008237696.1| (PREDICTED: transcriptional corepressor SEUSS [Prunus mume]) HSP 1 Score: 473.0 bits (1216), Expect = 4.9e-130 Identity = 258/381 (67.72%), Postives = 299/381 (78.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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