Cla003785 (gene) Watermelon (97103) v1

Overview
NameCla003785
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionIntegral membrane protein (AHRD V1 **-- A8JE84_CHLRE); contains Interpro domain(s) IPR007462 Protein of unknown function DUF502
LocationChr8 : 10872717 .. 10875722 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGATAACAGAGAATCCACTTATGCTCCGATGATTCATTCTGATCACGACGATGATACTCCCAAGTCCCCTCCACCTTCTCCCAATTCATCCACTCGCAAGGTATTCAACTCCTTTTTCCAGCTTTTTGCTCCTCTTTATCATCTGCCAATTCCTTTTCTATTGATTCTAATCTTTTCTCTTTAGCGTTACTTCTTTATTCTAGCTATCTAGGGTTCATTCTAGCTGTAAAGGGTACTTTTAGTTGAAGGATCAATAGAGAAGGAAGAGGAGTCAGTCTTTGATTGGGCGATGGGTACTTAGGGGTTTGTTTTTAGGTATGATGATATCTTCAGGGATTAATAATTTCCTTGTTTAAGTACTTTAGAGAAGGGAAAATCATGGGTCGGAAGAAAATGGTTAACTCAAAGTCCCTCTGGAAGGTTTTCCTAATCGCTATTTTCTGAAAGGTCTAGTGAAAGATTCTTCTATGAAAACTTTCAATAAATTTATTATTAATGCCCCTCTTATTCATATCTCCCTTATGAATGGTGTTTCTCGTACCCTCATCTGAGAAACTTGGTGGTGTATCCGCCAATGAATGTTGAGGATCCACATTAGAAAAGTGGAGAGAATTTATCATCTTAATAAGATAGATAAACTACTTTTCTTATTGCCATTTAGTTTTGAGATGGAATCTTACGTTATCTAATATGGTATCAAAGACAGTTTAAGCCCAAATGGGCGAATGGTCCCAAAAAAAAGGGATCCGATCCAAAAATAGTGAACCCAAAAAGACACCATCTTGAAGGGTATGTTTAGGATCCCACGTTAGAAAAGTGGACAGACATCACAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGATAAGGGAGACCACACAATCTTAATAAACTAGATTGGCTACTCCACTCATTGCCATTTGATTTTGAGATGGAACCTCATGTTATCTAATACTCATGTGAGAAACTTGGTGGTGTATTCCCTTATCAATATATTATGTATCTTCAATGTATTCCAAAATTCTTTGGTGACTAGAATCTTGAAAATTTTCTTTTGAAATGGGGCTGTTGCTTGTTTTGATTTGAGAATATGTGTGGCTTGAATATCCAAACCTCCTTCAAACTCTTAAACAATATGGTATATTTAATGTTTCAACCTTAGAAACAGAAGTCAGCTGAGAAAAGGTGGAACGAAAAACTGGCCTCTGTTTTTTGGGCAGTTCTTGGTGCTAGAGACTACTGGGAGGGTTGCTCACAACCTACAGCTCCCATCCCCTTTCTAATATCCACCCATTATTTCATGTTTTCTAGCTGAAGTAAACTATTTACATCTTTAAAATATATTGGTTTTTCAACAATGTCAATTATTGGATTTTTTTCAGGCTTGCTATGCTGTTCTCCAGAGTTGGGTCTCAAAGAAGTTCATGACTGGATGGTAATCAGCATTAAAAGAGTGTTTCATACTGCTTATCTGCAACCATTTAAATCAATTTCTAGGTCTTCAATTCCAACTATTCAAGGTTTTGATAAATGATGGCATTGCAGTGTGGTTCTGTTTCCTGTTGCCATTACATTCTTCATCACATGGTGGTTTGTCCAGTTTGTCGATAGCTTCTTTAGCCCATTATATGCCAGGCTTGGCATAAACATATTTGGTATGCTTCTTGTGCTCCAGTTTCATTGTTGTTGGTCAAGTTCGGGTGCTTTGGAAAATATATTTGTGGACTTTTTACTATTATTGACTGTTCCGGAACACACTTGTAGAAAATCAAGCTCAATGATTCAGTTGTAAATTAGGCATTGCTAAGATTGCTTTCTTGTATATTTTTAAAATTTTCCTTCCCATACAGGTTTAGGTTGGTTGCTTCATTCTAGCACATTTGATCTAATTTCTTGTATAAATCTGAGTCCTCCTCACCACTCACGGAATAAGAAAAACCTGTCTCTCTTACATAGCTTCACTTTGCAATGTGTTGGTCACAAAGATGCATAAAGGTGATAAATGATTATGTTGTAATATGAGATTGCTGTCATAGTTATTGTAAGGTCGAATCAAGAATATTCATCCACTGTTAAGATTATATGAGGTTGAGGTGTGTAAATACTTCACCTAGACCCTCATCGACGTAAAAGGAATAAAGTGTAGGATGGGAGCATAAGGAGCTTTATTTTTTTTTTTCAGACACACTACAAGGAGCTTGAAAAATACTGGATATGAGTTGTGTGTGTATATTTTGAAGTTTTATGGGTTTGACTTTTTAGATTGATATGGTTTCCCCAAGGAGTTTCACGCTTCCGCCTAATTGGCTAGGTTTACTTGAGACTAGTCCTTTTTCTTTTATTGGAAACCAAGCTTTCATACGCCACCTATCTTTCTCTTCGTACTCTTTACTTGCTGAATTGTTATTGTAAATTAGTCATTTTATGACTTTTTGAGTCTGATTCTAGGCTTCATCACACTTTTTGTTTTCGTTGAAGATATAGCTTTAGATTTATCCCTTCTTTTCATTTGTAGATCACTAACTTCATCCTTTCCTTACAATTACGATATGCATATTAAATAAATGATTTTTGTTGCAGGTCTTGGATTTGTTTCATCGTTGATATTTATATTTTTTGTTGGTTTATTTGCTTCATCATGGATGGGTGCCACTGTCTTCTGGCTAGGAGAATGGTTCATAAAAAAGATGCCCTTTGTAAAGCACATTTATTCAGCTTCAAAACAAATTAGTGCAGCTATTTCTCCAGGTATCTCATGTGCTTTTATTTGTTGATCTATCTTTGAAACTTTTGTTTTCATATTTTATTGATTGACTTTAATTGCATTAATCTTGTTTTAAGTTAATGATAAATGGAGGAACTATAATATTTTTAGTTCATGTTCAATCCTTTTCCAATACAACATTTGAAATTGATGCCACTATAACTTGTTCATTTGTGATAGCGATCGCCGATCTCTATCATGGAGAAGAACATAGAGTGTTGTAG

mRNA sequence

ATGGTTGATAACAGAGAATCCACTTATGCTCCGATGATTCATTCTGATCACGACGATGATACTCCCAAGTCCCCTCCACCTTCTCCCAATTCATCCACTCGCAAGGCTTGCTATGCTGTTCTCCAGAGTTGGGTCTCAAAGAAGTTCATGACTGGATGTGTGGTTCTGTTTCCTGTTGCCATTACATTCTTCATCACATGGTGGTTTGTCCAGTTTGTCGATAGCTTCTTTAGCCCATTATATGCCAGGCTTGGCATAAACATATTTGGTCTTGGATTTGTTTCATCGTTGATATTTATATTTTTTGTTGGTTTATTTGCTTCATCATGGATGGGTGCCACTGTCTTCTGGCTAGGAGAATGGTTCATAAAAAAGATGCCCTTTGTAAAGCACATTTATTCAGCTTCAAAACAAATTAGTGCAGCTATTTCTCCAGCGATCGCCGATCTCTATCATGGAGAAGAACATAGAGTGTTGTAG

Coding sequence (CDS)

ATGGTTGATAACAGAGAATCCACTTATGCTCCGATGATTCATTCTGATCACGACGATGATACTCCCAAGTCCCCTCCACCTTCTCCCAATTCATCCACTCGCAAGGCTTGCTATGCTGTTCTCCAGAGTTGGGTCTCAAAGAAGTTCATGACTGGATGTGTGGTTCTGTTTCCTGTTGCCATTACATTCTTCATCACATGGTGGTTTGTCCAGTTTGTCGATAGCTTCTTTAGCCCATTATATGCCAGGCTTGGCATAAACATATTTGGTCTTGGATTTGTTTCATCGTTGATATTTATATTTTTTGTTGGTTTATTTGCTTCATCATGGATGGGTGCCACTGTCTTCTGGCTAGGAGAATGGTTCATAAAAAAGATGCCCTTTGTAAAGCACATTTATTCAGCTTCAAAACAAATTAGTGCAGCTATTTCTCCAGCGATCGCCGATCTCTATCATGGAGAAGAACATAGAGTGTTGTAG

Protein sequence

MVDNRESTYAPMIHSDHDDDTPKSPPPSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFITWWFVQFVDSFFSPLYARLGINIFGLGFVSSLIFIFFVGLFASSWMGATVFWLGEWFIKKMPFVKHIYSASKQISAAISPAIADLYHGEEHRVL
Homology
[Close]
BLAST of Cla003785 vs. Swiss-Prot
Match: LCV2_ARATH (Protein LIKE COV 2 OS=Arabidopsis thaliana GN=LCV2 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 7.1e-59
Identity = 107/150 (71.33%), Postives = 124/150 (82.67%), Query Frame = 1 

Query: 1   MVDNRESTYAPMI-----HSDHDDDTPKSPPPSPNSSTRKACYAVLQSWVSKKFMTGCVV 60
           M + +E+T + +      H D  DD PKSPP SPNSSTRKACY VLQSWVSKKFMTG VV
Sbjct: 1   MAEGKEATTSSLSQGLTPHQD-PDDAPKSPPNSPNSSTRKACYGVLQSWVSKKFMTGFVV 60

Query: 61  LFPVAITFFITWWFVQFVDSFFSPLYARLGINIFGLGFVSSLIFIFFVGLFASSWMGATV 120
           LFPVA+TF ITWWF+QFVD FFSP+Y  LG++IFGLGF++S++F FFVG+FASSW+G+TV
Sbjct: 61  LFPVAVTFLITWWFIQFVDGFFSPIYENLGVDIFGLGFITSVLFTFFVGIFASSWLGSTV 120

Query: 121 FWLGEWFIKKMPFVKHIYSASKQISAAISP 146
           FWLGE FI++MPFVKHIYSASKQIS AISP
Sbjct: 121 FWLGEQFIRRMPFVKHIYSASKQISTAISP 149

[Close]
BLAST of Cla003785 vs. Swiss-Prot
Match: LCV3_ARATH (Protein LIKE COV 3 OS=Arabidopsis thaliana GN=LCV3 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.5e-45
Identity = 84/131 (64.12%), Postives = 101/131 (77.10%), Query Frame = 1 

Query: 20  DTPKSPPPSPNSST-----RKACYAVLQSWVSKKFMTGCVVLFPVAITFFITWWFVQFVD 79
           D   S PPSP +S      ++A Y V++SW SKKFMTGCV+L P+A+TF+ TWWF+ FVD
Sbjct: 23  DVVLSVPPSPLASPIHVAGKEAIYKVIRSWASKKFMTGCVILLPIAVTFYFTWWFIHFVD 82

Query: 80  SFFSPLYARLGINIFGLGFVSSLIFIFFVGLFASSWMGATVFWLGEWFIKKMPFVKHIYS 139
            FFSP+Y  LGIN+FGLGFV+S+ FIF VG+F SSW+GA+V  +GEWFIKKMP V +IYS
Sbjct: 83  GFFSPIYTHLGINMFGLGFVTSITFIFMVGVFMSSWLGASVLSIGEWFIKKMPLVSYIYS 142

Query: 140 ASKQISAAISP 146
           ASKQIS AISP
Sbjct: 143 ASKQISGAISP 153

[Close]
BLAST of Cla003785 vs. Swiss-Prot
Match: COV1_ARATH (Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana GN=COV1 PE=1 SV=2)

HSP 1 Score: 182.2 bits (461), Expect = 4.5e-45
Identity = 84/142 (59.15%), Postives = 104/142 (73.24%), Query Frame = 1 

Query: 11  PMIHSDHDDDTPKSPPPSPNS-------STRKACYAVLQSWVSKKFMTGCVVLFPVAITF 70
           P+  S   DD   S P S +S       S+ +     ++ W SKKFMTGCV+L P+AITF
Sbjct: 22  PVADSGDKDDGSSSKPSSSSSASSSSHQSSHETLSLFIRGWASKKFMTGCVILLPIAITF 81

Query: 71  FITWWFVQFVDSFFSPLYARLGINIFGLGFVSSLIFIFFVGLFASSWMGATVFWLGEWFI 130
           +ITWWF+ FVD FFSP+YA+LGIN+FG GF++S+ FIF VG+F SSW+GA+V  LGEWFI
Sbjct: 82  YITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFIFLVGVFMSSWLGASVLNLGEWFI 141

Query: 131 KKMPFVKHIYSASKQISAAISP 146
           K+MPFV+HIY+ASKQIS AISP
Sbjct: 142 KRMPFVRHIYNASKQISTAISP 163

[Close]
BLAST of Cla003785 vs. Swiss-Prot
Match: LCV1_ARATH (Protein LIKE COV 1 OS=Arabidopsis thaliana GN=LCV1 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-43
Identity = 80/135 (59.26%), Postives = 100/135 (74.07%), Query Frame = 1 

Query: 16  DHDDDTPKSPPPSPNSST-----RKACYAVLQSWVSKKFMTGCVVLFPVAITFFITWWFV 75
           D DD +   P  S ++S+      +     ++ W SKKFMTGCV+L P+A+TF+ TWWF+
Sbjct: 19  DKDDGSSSKPSSSSSASSSHQSGHETLSLFIRGWASKKFMTGCVILLPIAVTFYTTWWFI 78

Query: 76  QFVDSFFSPLYARLGINIFGLGFVSSLIFIFFVGLFASSWMGATVFWLGEWFIKKMPFVK 135
            FVD FFSP+YA LGINIFG GF++S+ FIF VG+F SSW+GA+V  LGEWFIK+MPFV+
Sbjct: 79  HFVDGFFSPIYALLGINIFGFGFLTSIAFIFLVGVFMSSWLGASVLNLGEWFIKRMPFVR 138

Query: 136 HIYSASKQISAAISP 146
           HIY+ASKQIS AISP
Sbjct: 139 HIYNASKQISTAISP 153

[Close]
BLAST of Cla003785 vs. TrEMBL
Match: A0A0A0KDM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G017020 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 6.1e-73
Identity = 137/145 (94.48%), Postives = 141/145 (97.24%), Query Frame = 1 

Query: 1   MVDNRESTYAPMIHSDHDDDTPKSPPPSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVA 60
           MVDNRES+ APMI SD DDDTPKSPP SP+SSTRKACYAVLQSWVSKKFMTGCVVLFPVA
Sbjct: 1   MVDNRESS-APMIDSDPDDDTPKSPPSSPSSSTRKACYAVLQSWVSKKFMTGCVVLFPVA 60

Query: 61  ITFFITWWFVQFVDSFFSPLYARLGINIFGLGFVSSLIFIFFVGLFASSWMGATVFWLGE 120
           ITFFITWWFVQFVDSFFSPLYARLGI+IFGLGFVSSLIFIFF+GLFASSWMGATVFWLGE
Sbjct: 61  ITFFITWWFVQFVDSFFSPLYARLGIHIFGLGFVSSLIFIFFIGLFASSWMGATVFWLGE 120

Query: 121 WFIKKMPFVKHIYSASKQISAAISP 146
           WFIKKMPFVKHIYSASKQISAAISP
Sbjct: 121 WFIKKMPFVKHIYSASKQISAAISP 144

[Close]
BLAST of Cla003785 vs. TrEMBL
Match: M5VLP6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010293mg PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 5.1e-64
Identity = 115/145 (79.31%), Postives = 133/145 (91.72%), Query Frame = 1 

Query: 1   MVDNRESTYAPMIHSDHDDDTPKSPPPSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVA 60
           M + +EST +P+  +D  +D PKSPP SPNSSTR+ACYAVLQSWVSKKFMTGC+VLFPVA
Sbjct: 1   MAETKESTSSPLAQAD-SEDVPKSPPSSPNSSTREACYAVLQSWVSKKFMTGCMVLFPVA 60

Query: 61  ITFFITWWFVQFVDSFFSPLYARLGINIFGLGFVSSLIFIFFVGLFASSWMGATVFWLGE 120
           +TFFITWWFVQFVD FFSP+YARLG++IFGLGFV+SL FIF VG+FASSWMGATVFW+GE
Sbjct: 61  VTFFITWWFVQFVDGFFSPIYARLGVSIFGLGFVTSLAFIFLVGIFASSWMGATVFWIGE 120

Query: 121 WFIKKMPFVKHIYSASKQISAAISP 146
           WFIK+MPF+KHIYSASKQIS+AISP
Sbjct: 121 WFIKRMPFMKHIYSASKQISSAISP 144

[Close]
BLAST of Cla003785 vs. TrEMBL
Match: B9SE86_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0959740 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.5e-63
Identity = 117/150 (78.00%), Postives = 134/150 (89.33%), Query Frame = 1 

Query: 1   MVDNRESTYAPMIHS----DHD-DDTPKSPPPSPNSSTRKACYAVLQSWVSKKFMTGCVV 60
           M DN++ST + +       D D DD PKSPP SPNSSTRKACYAVLQSWVSKKFMTGCVV
Sbjct: 1   MADNKDSTSSSLSQGLTRRDPDPDDIPKSPPSSPNSSTRKACYAVLQSWVSKKFMTGCVV 60

Query: 61  LFPVAITFFITWWFVQFVDSFFSPLYARLGINIFGLGFVSSLIFIFFVGLFASSWMGATV 120
           LFPVA+TF +TWWF+QFVD FFSPLYA+LG++IFGLGFV+SL+FIFFVG+FASSWMGATV
Sbjct: 61  LFPVAVTFLVTWWFIQFVDGFFSPLYAKLGVDIFGLGFVTSLLFIFFVGVFASSWMGATV 120

Query: 121 FWLGEWFIKKMPFVKHIYSASKQISAAISP 146
           FW+GEWFIK+MPF+KHIYSASKQISAA+SP
Sbjct: 121 FWVGEWFIKRMPFMKHIYSASKQISAAVSP 150

[Close]
BLAST of Cla003785 vs. TrEMBL
Match: A0A059BT82_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02692 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.2e-62
Identity = 120/167 (71.86%), Postives = 133/167 (79.64%), Query Frame = 1 

Query: 1   MVDNRESTYAPMI-HSDHD---------------------DDTPKSPPPSPNSSTRKACY 60
           M D+++ST  P+  HS H                      +D  KSPP SPNSSTRKACY
Sbjct: 1   MADDKQSTSIPLTEHSSHSKGGGGGGGGGGGGSSSSLQDPEDVDKSPPSSPNSSTRKACY 60

Query: 61  AVLQSWVSKKFMTGCVVLFPVAITFFITWWFVQFVDSFFSPLYARLGINIFGLGFVSSLI 120
           AVLQSWVSKKFMTGCVVLFPVA+TFFITWWF+QF D FFSP+Y RLGI+IFGLGFV+SLI
Sbjct: 61  AVLQSWVSKKFMTGCVVLFPVAVTFFITWWFIQFFDGFFSPIYERLGIDIFGLGFVTSLI 120

Query: 121 FIFFVGLFASSWMGATVFWLGEWFIKKMPFVKHIYSASKQISAAISP 146
           FIFFVG+FASSWMGATVFWLGEWFIK+MPF+KHIYSASKQISAAISP
Sbjct: 121 FIFFVGIFASSWMGATVFWLGEWFIKRMPFMKHIYSASKQISAAISP 167

[Close]
BLAST of Cla003785 vs. TrEMBL
Match: A0A067KWE5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08357 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.2e-62
Identity = 115/150 (76.67%), Postives = 132/150 (88.00%), Query Frame = 1 

Query: 1   MVDNRESTYAPMIHS----DHD-DDTPKSPPPSPNSSTRKACYAVLQSWVSKKFMTGCVV 60
           M +N+EST   +       D D DD PKSPP SPNSSTRKACYAVLQSWVS KFMTGCVV
Sbjct: 1   MAENKESTSISLSQGLTRRDSDPDDIPKSPPSSPNSSTRKACYAVLQSWVSTKFMTGCVV 60

Query: 61  LFPVAITFFITWWFVQFVDSFFSPLYARLGINIFGLGFVSSLIFIFFVGLFASSWMGATV 120
           LFPVA+TF +TWWF+QFVD FFSP+YA+LGI+IFGLGF++SL+FIFFVG+FASSW+GATV
Sbjct: 61  LFPVAVTFLVTWWFIQFVDGFFSPIYAKLGIDIFGLGFITSLLFIFFVGIFASSWLGATV 120

Query: 121 FWLGEWFIKKMPFVKHIYSASKQISAAISP 146
           FW+GEWFIK+MPF+KHIYSASKQISAAISP
Sbjct: 121 FWIGEWFIKRMPFMKHIYSASKQISAAISP 150

[Close]
BLAST of Cla003785 vs. NCBI nr
Match: gi|449441195|ref|XP_004138368.1| (PREDICTED: protein LIKE COV 2 [Cucumis sativus])

HSP 1 Score: 281.6 bits (719), Expect = 8.7e-73
Identity = 137/145 (94.48%), Postives = 141/145 (97.24%), Query Frame = 1 

Query: 1   MVDNRESTYAPMIHSDHDDDTPKSPPPSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVA 60
           MVDNRES+ APMI SD DDDTPKSPP SP+SSTRKACYAVLQSWVSKKFMTGCVVLFPVA
Sbjct: 1   MVDNRESS-APMIDSDPDDDTPKSPPSSPSSSTRKACYAVLQSWVSKKFMTGCVVLFPVA 60

Query: 61  ITFFITWWFVQFVDSFFSPLYARLGINIFGLGFVSSLIFIFFVGLFASSWMGATVFWLGE 120
           ITFFITWWFVQFVDSFFSPLYARLGI+IFGLGFVSSLIFIFF+GLFASSWMGATVFWLGE
Sbjct: 61  ITFFITWWFVQFVDSFFSPLYARLGIHIFGLGFVSSLIFIFFIGLFASSWMGATVFWLGE 120

Query: 121 WFIKKMPFVKHIYSASKQISAAISP 146
           WFIKKMPFVKHIYSASKQISAAISP
Sbjct: 121 WFIKKMPFVKHIYSASKQISAAISP 144

[Close]
BLAST of Cla003785 vs. NCBI nr
Match: gi|720094146|ref|XP_010246268.1| (PREDICTED: uncharacterized protein LOC104589603 [Nelumbo nucifera])

HSP 1 Score: 252.7 bits (644), Expect = 4.3e-64
Identity = 117/148 (79.05%), Postives = 132/148 (89.19%), Query Frame = 1 

Query: 1   MVDNRESTYAPMIHSD---HDDDTPKSPPPSPNSSTRKACYAVLQSWVSKKFMTGCVVLF 60
           M + +EST  P+   D     +D  KSPP SPNSSTRKACYAVLQSWVSKKFMTGCVVLF
Sbjct: 1   MAEEKESTSIPLSQGDGCEDPEDPAKSPPNSPNSSTRKACYAVLQSWVSKKFMTGCVVLF 60

Query: 61  PVAITFFITWWFVQFVDSFFSPLYARLGINIFGLGFVSSLIFIFFVGLFASSWMGATVFW 120
           PVA+TFF+TWWF+QFVDSFFSP+YARLGI+IFGLGFV+SL+F+FFVG+F SSWMGATVFW
Sbjct: 61  PVAVTFFVTWWFIQFVDSFFSPIYARLGIDIFGLGFVTSLVFVFFVGIFVSSWMGATVFW 120

Query: 121 LGEWFIKKMPFVKHIYSASKQISAAISP 146
           LGEWFIK+MPFV+HIYSASKQISAAISP
Sbjct: 121 LGEWFIKRMPFVRHIYSASKQISAAISP 148

[Close]
BLAST of Cla003785 vs. NCBI nr
Match: gi|595793717|ref|XP_007200607.1| (hypothetical protein PRUPE_ppa010293mg [Prunus persica])

HSP 1 Score: 251.9 bits (642), Expect = 7.4e-64
Identity = 115/145 (79.31%), Postives = 133/145 (91.72%), Query Frame = 1 

Query: 1   MVDNRESTYAPMIHSDHDDDTPKSPPPSPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVA 60
           M + +EST +P+  +D  +D PKSPP SPNSSTR+ACYAVLQSWVSKKFMTGC+VLFPVA
Sbjct: 1   MAETKESTSSPLAQAD-SEDVPKSPPSSPNSSTREACYAVLQSWVSKKFMTGCMVLFPVA 60

Query: 61  ITFFITWWFVQFVDSFFSPLYARLGINIFGLGFVSSLIFIFFVGLFASSWMGATVFWLGE 120
           +TFFITWWFVQFVD FFSP+YARLG++IFGLGFV+SL FIF VG+FASSWMGATVFW+GE
Sbjct: 61  VTFFITWWFVQFVDGFFSPIYARLGVSIFGLGFVTSLAFIFLVGIFASSWMGATVFWIGE 120

Query: 121 WFIKKMPFVKHIYSASKQISAAISP 146
           WFIK+MPF+KHIYSASKQIS+AISP
Sbjct: 121 WFIKRMPFMKHIYSASKQISSAISP 144

[Close]
BLAST of Cla003785 vs. NCBI nr
Match: gi|223536396|gb|EEF38045.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 250.4 bits (638), Expect = 2.1e-63
Identity = 117/150 (78.00%), Postives = 134/150 (89.33%), Query Frame = 1 

Query: 1   MVDNRESTYAPMIHS----DHD-DDTPKSPPPSPNSSTRKACYAVLQSWVSKKFMTGCVV 60
           M DN++ST + +       D D DD PKSPP SPNSSTRKACYAVLQSWVSKKFMTGCVV
Sbjct: 1   MADNKDSTSSSLSQGLTRRDPDPDDIPKSPPSSPNSSTRKACYAVLQSWVSKKFMTGCVV 60

Query: 61  LFPVAITFFITWWFVQFVDSFFSPLYARLGINIFGLGFVSSLIFIFFVGLFASSWMGATV 120
           LFPVA+TF +TWWF+QFVD FFSPLYA+LG++IFGLGFV+SL+FIFFVG+FASSWMGATV
Sbjct: 61  LFPVAVTFLVTWWFIQFVDGFFSPLYAKLGVDIFGLGFVTSLLFIFFVGVFASSWMGATV 120

Query: 121 FWLGEWFIKKMPFVKHIYSASKQISAAISP 146
           FW+GEWFIK+MPF+KHIYSASKQISAA+SP
Sbjct: 121 FWVGEWFIKRMPFMKHIYSASKQISAAVSP 150

[Close]
BLAST of Cla003785 vs. NCBI nr
Match: gi|1000955179|ref|XP_002524305.2| (PREDICTED: protein LIKE COV 2 [Ricinus communis])

HSP 1 Score: 250.4 bits (638), Expect = 2.1e-63
Identity = 117/150 (78.00%), Postives = 134/150 (89.33%), Query Frame = 1 

Query: 1   MVDNRESTYAPMIHS----DHD-DDTPKSPPPSPNSSTRKACYAVLQSWVSKKFMTGCVV 60
           M DN++ST + +       D D DD PKSPP SPNSSTRKACYAVLQSWVSKKFMTGCVV
Sbjct: 1   MADNKDSTSSSLSQGLTRRDPDPDDIPKSPPSSPNSSTRKACYAVLQSWVSKKFMTGCVV 60

Query: 61  LFPVAITFFITWWFVQFVDSFFSPLYARLGINIFGLGFVSSLIFIFFVGLFASSWMGATV 120
           LFPVA+TF +TWWF+QFVD FFSPLYA+LG++IFGLGFV+SL+FIFFVG+FASSWMGATV
Sbjct: 61  LFPVAVTFLVTWWFIQFVDGFFSPLYAKLGVDIFGLGFVTSLLFIFFVGVFASSWMGATV 120

Query: 121 FWLGEWFIKKMPFVKHIYSASKQISAAISP 146
           FW+GEWFIK+MPF+KHIYSASKQISAA+SP
Sbjct: 121 FWVGEWFIKRMPFMKHIYSASKQISAAVSP 150

The following BLAST results are available for this feature:
BLAST of Cla003785 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LCV2_ARATH7.1e-5971.33Protein LIKE COV 2 OS=Arabidopsis thaliana GN=LCV2 PE=2 SV=1[more]
LCV3_ARATH1.5e-4564.12Protein LIKE COV 3 OS=Arabidopsis thaliana GN=LCV3 PE=2 SV=1[more]
COV1_ARATH4.5e-4559.15Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana GN=COV1 PE=1 SV=2[more]
LCV1_ARATH1.4e-4359.26Protein LIKE COV 1 OS=Arabidopsis thaliana GN=LCV1 PE=2 SV=1[more]
BLAST of Cla003785 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDM8_CUCSA6.1e-7394.48Uncharacterized protein OS=Cucumis sativus GN=Csa_6G017020 PE=4 SV=1[more]
M5VLP6_PRUPE5.1e-6479.31Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010293mg PE=4 SV=1[more]
B9SE86_RICCO1.5e-6378.00Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0959740 PE=4 SV=1[more]
A0A059BT82_EUCGR2.2e-6271.86Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02692 PE=4 SV=1[more]
A0A067KWE5_JATCU2.2e-6276.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08357 PE=4 SV=1[more]
BLAST of Cla003785 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441195|ref|XP_004138368.1|8.7e-7394.48PREDICTED: protein LIKE COV 2 [Cucumis sativus][more]
gi|720094146|ref|XP_010246268.1|4.3e-6479.05PREDICTED: uncharacterized protein LOC104589603 [Nelumbo nucifera][more]
gi|595793717|ref|XP_007200607.1|7.4e-6479.31hypothetical protein PRUPE_ppa010293mg [Prunus persica][more]
gi|223536396|gb|EEF38045.1|2.1e-6378.00conserved hypothetical protein [Ricinus communis][more]
gi|1000955179|ref|XP_002524305.2|2.1e-6378.00PREDICTED: protein LIKE COV 2 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007462DUF502
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010222 stem vascular tissue pattern formation
cellular_component GO:0005768 endosome
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU48819watermelon EST collection version 2.0transcribed_cluster
WMU71218watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003785Cla003785.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU71218WMU71218transcribed_cluster
WMU48819WMU48819transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007462Protein of unknown function DUF502PFAMPF04367DUF502coord: 96..145
score: 5.3
NoneNo IPR availablePANTHERPTHR31876FAMILY NOT NAMEDcoord: 12..145
score: 8.2
NoneNo IPR availablePANTHERPTHR31876:SF4SUBFAMILY NOT NAMEDcoord: 12..145
score: 8.2