Cla003766 (gene) Watermelon (97103) v1

NameCla003766
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr6 : 14278385 .. 14279104 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCCAGCAACCCACCCCCTCCAAAAGCCCTAAACCTATTGCCTCATCCTCAAGGCATGGTAGTCAGAATTTGTCCACTACTTCCACCACACCTGCACCCCTCGCCATTATTCGCCCCAATAGTCCCGAGTTGGAAGCGACATCAGCCCCATCTCCGCCACGCTCTAGGGACCTGTCTGAAGCTCAAGAGTTGGGAAGGAATGACGAGTCCACCGTCTTCGGAGATATTCTAGACACCATCGATGAAGAAGATGATAACTGGTTGGACGGGTTGGTCGACCATAGGATGAAAAATGAGTCACGTGGGTTAGTCCCTGCGGTGAGTGGTCTTGAGGAGTCGGACTCCGATGAAAGACCTATTGGGAAGGTAATAGCGGCGGTGGAAAAGAAGAAGTCCGCCACGAAAAGGAAAATCAGGCCAATAAGGGCTAGGGAAGAAGAAGCCGAGAAAGATGTACCTCCGCTAAGAAGGAAGAATGAAAAAATAAAGGATGCAGGGACATCCGAGGTTATCACATCATCTTTCACCGCATCATCTGTTGAGCGGTTAGCAGCGAGGGCGGCAGAGAAGTCCAAGAAGCTGAAAGACGACATCAAAAAAANNNNNNNNCGGAGTCGTTTCTCGCCGCAAAGAAGAGAAGAAAAGAGGAAATCGCATCTAGCGAACAAGCTGCCAAGGAGGCCGCCAGAAAAACCGAGTTTCTCCGTCGCATAG

mRNA sequence

ATGGCTTCCCAGCAACCCACCCCCTCCAAAAGCCCTAAACCTATTGCCTCATCCTCAAGGCATGGTAGTCAGAATTTGTCCACTACTTCCACCACACCTGCACCCCTCGCCATTATTCGCCCCAATAGTCCCGAGTTGGAAGCGACATCAGCCCCATCTCCGCCACGCTCTAGGGACCTGTCTGAAGCTCAAGAGTTGGGAAGGAATGACGAGTCCACCGTCTTCGGAGATATTCTAGACACCATCGATGAAGAAGATGATAACTGGTTGGACGGGTTGGTCGACCATAGGATGAAAAATGAGTCACGTGGGTTAGTCCCTGCGGTGAGTGGTCTTGAGGAGTCGGACTCCGATGAAAGACCTATTGGGAAGGTAATAGCGGCGGTGGAAAAGAAGAAGTCCGCCACGAAAAGGAAAATCAGGCCAATAAGGGCTAGGGAAGAAGAAGCCGAGAAAGATGTACCTCCGCTAAGAAGGAAGAATGAAAAAATAAAGGATGCAGGGACATCCGAGGTTATCACATCATCTTTCACCGCATCATCTGTTGAGCGGTTAGCAGCGAGGGCGGCAGAGAAGTCCAAGAAGCTGAAAGACGACATCAAAAAAANNNNNNNNCGGAGTCGTTTCTCGCCGCAAAGAAGAGAAGAAAAGAGGAAATCGCATCTAGCGAACAAGCTGCCAAGGAGGCCGCCAGAAAAACCGAGTTTCTCCGTCGCATAG

Coding sequence (CDS)

ATGGCTTCCCAGCAACCCACCCCCTCCAAAAGCCCTAAACCTATTGCCTCATCCTCAAGGCATGGTAGTCAGAATTTGTCCACTACTTCCACCACACCTGCACCCCTCGCCATTATTCGCCCCAATAGTCCCGAGTTGGAAGCGACATCAGCCCCATCTCCGCCACGCTCTAGGGACCTGTCTGAAGCTCAAGAGTTGGGAAGGAATGACGAGTCCACCGTCTTCGGAGATATTCTAGACACCATCGATGAAGAAGATGATAACTGGTTGGACGGGTTGGTCGACCATAGGATGAAAAATGAGTCACGTGGGTTAGTCCCTGCGGTGAGTGGTCTTGAGGAGTCGGACTCCGATGAAAGACCTATTGGGAAGGTAATAGCGGCGGTGGAAAAGAAGAAGTCCGCCACGAAAAGGAAAATCAGGCCAATAAGGGCTAGGGAAGAAGAAGCCGAGAAAGATGTACCTCCGCTAAGAAGGAAGAATGAAAAAATAAAGGATGCAGGGACATCCGAGGTTATCACATCATCTTTCACCGCATCATCTGTTGAGCGGTTAGCAGCGAGGGCGGCAGAGAAGTCCAAGAAGCTGAAAGACGACATCAAAAAAANNNNNNNNCGGAGTCGTTTCTCGCCGCAAAGAAGAGAAGAAAAGAGGAAATCGCATCTAGCGAACAAGCTGCCAAGGAGGCCGCCAGAAAAACCGAGTTTCTCCGTCGCATAG

Protein sequence

MASQQPTPSKSPKPIASSSRHGSQNLSTTSTTPAPLAIIRPNSPELEATSAPSPPRSRDLSEAQELGRNDESTVFGDILDTIDEEDDNWLDGLVDHRMKNESRGLVPAVSGLEESDSDERPIGKVIAAVEKKKSATKRKIRPIRAREEEAEKDVPPLRRKNEKIKDAGTSEVITSSFTASSVERLAARAAEKSKKLKDDIKKXXXRSRFSPQRREEKRKSHLANKLPRRPPEKPSFSVA
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003766Cla003766.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 206..206
score: -coord: 186..202
scor
NoneNo IPR availableGENE3DG3DSA:2.30.30.40coord: 76..108
score: 7.

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None