Cla003525 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla003525
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Matrix metalloproteinase (AHRD V1 *- D7LBU9_ARALL); contains Interpro domain(s) IPR001818 Peptidase M10A and M12B, matrixin and adamalysin
Location	Chr1 : 13795486 .. 13796322 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCTGCCCCTTCTATTGGTCCTCTTCTTCATCCTCTGTACGCCGCCCTGCCTTCCATCCCCGACAACACTACCCCAAAACCCCACCGCCGCGGTGATTTACCGGTCAAATTCCACTCTACTGCGGTGGCGCGTGTCCGACACGTTGCATAGACCCCATGCGACGGCGCATTATGTATTTTTTCCCGGGAAGCCACGGTGGATGCGGCGAATGCCGATGGTGCTGACGTACGCATTTTTCAAGGAGAATTGGATGAGCAACTTGAGTTTAAAAGACGTGAAAGCTGTATTTCGTAAGGCGTTTTCGAAATGGGCCCATGTGATTCCGGTGAGTTTCGAGGAGACCGACGACTATGGATACGCGGATATTAAAATCGGGTTTTATAGAGGCGATCATAGCGACGGGCAGGCGTTTGACGGCGTGTTGGGGGTTTTGGCACATTCTTTTTCCCCTGAGATTGGGAGGCTCCACCTAGATGCGGCGGAGACGTGGGCGGTTGATTTCGAGAAGGAGAAATCGGCGGTGGCGGTTGATTTGGAATCGGTGGCGACGCATGAGATTGGTCATTTGTTGGGGCTGGGTCACAGCTCTGTGAAGGAATCGGTAATGTATCCAAGCTTGAAGCCGAGGGAAAAGAAGGCAAATTTAGAAGTGGATGACGTGGAAGGCGTGCAAGCCCTGTACGGATCGAATCCAAATTTCAAGTTTGAGTCTTTGGAATTGAAGTCCGACACTTCTGCCAGTCAGCCACCCGTTTCCACGTGTACAATAGCTTGCCATTTTTCCCTCGCCTTCTTCCTTGTTTCCACTTACCATTTTATTCTTTTTCCATAA

mRNA sequence

ATGTTTCTGCCCCTTCTATTGGTCCTCTTCTTCATCCTCTGTACGCCGCCCTGCCTTCCATCCCCGACAACACTACCCCAAAACCCCACCGCCGCGGTGATTTACCGGTCAAATTCCACTCTACTGCGGTGGCGCGTGTCCGACACGTTGCATAGACCCCATGCGACGGCGCATTATGTATTTTTTCCCGGGAAGCCACGGTGGATGCGGCGAATGCCGATGGTGCTGACGTACGCATTTTTCAAGGAGAATTGGATGAGCAACTTGAGTTTAAAAGACGTGAAAGCTGTATTTCGTAAGGCGTTTTCGAAATGGGCCCATGTGATTCCGGTGAGTTTCGAGGAGACCGACGACTATGGATACGCGGATATTAAAATCGGGTTTTATAGAGGCGATCATAGCGACGGGCAGGCGTTTGACGGCGTGTTGGGGGTTTTGGCACATTCTTTTTCCCCTGAGATTGGGAGGCTCCACCTAGATGCGGCGGAGACGTGGGCGGTTGATTTCGAGAAGGAGAAATCGGCGGTGGCGGTTGATTTGGAATCGGTGGCGACGCATGAGATTGGTCATTTGTTGGGGCTGGGTCACAGCTCTGTGAAGGAATCGGTAATGTATCCAAGCTTGAAGCCGAGGGAAAAGAAGGCAAATTTAGAAGTGGATGACGTGGAAGGCGTGCAAGCCCTGTACGGATCGAATCCAAATTTCAAGTTTGAGTCTTTGGAATTGAAGTCCGACACTTCTGCCAGTCAGCCACCCGTTTCCACGTGTACAATAGCTTGCCATTTTTCCCTCGCCTTCTTCCTTGTTTCCACTTACCATTTTATTCTTTTTCCATAA

Coding sequence (CDS)

ATGTTTCTGCCCCTTCTATTGGTCCTCTTCTTCATCCTCTGTACGCCGCCCTGCCTTCCATCCCCGACAACACTACCCCAAAACCCCACCGCCGCGGTGATTTACCGGTCAAATTCCACTCTACTGCGGTGGCGCGTGTCCGACACGTTGCATAGACCCCATGCGACGGCGCATTATGTATTTTTTCCCGGGAAGCCACGGTGGATGCGGCGAATGCCGATGGTGCTGACGTACGCATTTTTCAAGGAGAATTGGATGAGCAACTTGAGTTTAAAAGACGTGAAAGCTGTATTTCGTAAGGCGTTTTCGAAATGGGCCCATGTGATTCCGGTGAGTTTCGAGGAGACCGACGACTATGGATACGCGGATATTAAAATCGGGTTTTATAGAGGCGATCATAGCGACGGGCAGGCGTTTGACGGCGTGTTGGGGGTTTTGGCACATTCTTTTTCCCCTGAGATTGGGAGGCTCCACCTAGATGCGGCGGAGACGTGGGCGGTTGATTTCGAGAAGGAGAAATCGGCGGTGGCGGTTGATTTGGAATCGGTGGCGACGCATGAGATTGGTCATTTGTTGGGGCTGGGTCACAGCTCTGTGAAGGAATCGGTAATGTATCCAAGCTTGAAGCCGAGGGAAAAGAAGGCAAATTTAGAAGTGGATGACGTGGAAGGCGTGCAAGCCCTGTACGGATCGAATCCAAATTTCAAGTTTGAGTCTTTGGAATTGAAGTCCGACACTTCTGCCAGTCAGCCACCCGTTTCCACGTGTACAATAGCTTGCCATTTTTCCCTCGCCTTCTTCCTTGTTTCCACTTACCATTTTATTCTTTTTCCATAA

Protein sequence

MFLPLLLVLFFILCTPPCLPSPTTLPQNPTAAVIYRSNSTLLRWRVSDTLHRPHATAHYVFFPGKPRWMRRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESLELKSDTSASQPPVSTCTIACHFSLAFFLVSTYHFILFP

Homology

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BLAST of Cla003525 vs. Swiss-Prot
Match: 4MMP_ARATH (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana GN=4MMP PE=1 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 6.2e-74
Identity = 134/196 (68.37%), Postives = 157/196 (80.10%), Query Frame = 1


Query: 54  HATAHYVFFPGKPRWMRRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAFSKWAHVIPVSF 113
           H    YV+FPG+PRW R +P+ LTYAF +EN    L+  D++ VFR+AF KWA VIPVSF
Sbjct: 120 HTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSF 179

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEK 173
            ET+DY  ADIKIGF+ GDH DG+ FDGVLGVLAH+FSPE GRLHLD AETWAVDF++EK
Sbjct: 180 IETEDYVIADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEK 239

Query: 174 SAVAVDLESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDVEGVQALYGSNP 233
           S+VAVDLESVA HEIGH+LGLGHSSVK++ MYP+LKPR KK NL +DDV GVQ+LYG+NP
Sbjct: 240 SSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLYGTNP 299

Query: 234 NFKFESLELKSDTSAS 250
           NF   SL L S+TS +
Sbjct: 300 NFTLNSL-LASETSTN 314

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BLAST of Cla003525 vs. Swiss-Prot
Match: 1MMP_ARATH (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana GN=1MMP PE=1 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.0e-64
Identity = 124/194 (63.92%), Postives = 143/194 (73.71%), Query Frame = 1


Query: 54  HATAHYVFFPGKPRWMRRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAFSKWAHVIPVSF 113
           H TAHY +F GKP+W R     LTYA  K + +  L+ +DVK VFR+AFS+W+ VIPVSF
Sbjct: 145 HTTAHYTYFNGKPKWNRD---TLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSF 204

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE-KE 173
           EE DD+  AD+KIGFY GDH DG  FDGVLG LAH+F+PE GRLHLDAAETW VD + K 
Sbjct: 205 EEVDDFTTADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKG 264

Query: 174 KSAVAVDLESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDVEGVQALYGSN 233
            S VAVDLESVATHEIGHLLGLGHSS + +VMYPSL+PR KK +L VDDV GV  LYG N
Sbjct: 265 SSEVAVDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLYGPN 324

Query: 234 PNFKFESLELKSDT 247
           P  + +SL    D+
Sbjct: 325 PKLRLDSLTQSEDS 335

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BLAST of Cla003525 vs. Swiss-Prot
Match: 2MMP_ARATH (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana GN=2MMP PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.4e-49
Identity = 98/185 (52.97%), Postives = 126/185 (68.11%), Query Frame = 1


Query: 54  HATAHYVFFPGKPRWMRRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAFSKWAHVIPVSF 113
           HA   Y  FPG+PRW R     LTYAF  +N ++    ++VK+VF +AF +W+ V  ++F
Sbjct: 150 HAVKRYTLFPGEPRWPRNR-RDLTYAFDPKNPLT----EEVKSVFSRAFGRWSDVTALNF 209

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKE- 173
             ++ +  +DI IGFY GDH DG+ FDGVLG LAH+FSP  G+ HLDA E W V  + + 
Sbjct: 210 TLSESFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDS 269

Query: 174 --KSAVAVDLESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDVEGVQALYG 233
                 AVDLESVA HEIGHLLGLGHSSV+ES+MYP++   ++K +L  DDVEG+Q LYG
Sbjct: 270 FLSVTAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYG 329

Query: 234 SNPNF 236
           +NPNF
Sbjct: 330 ANPNF 329

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BLAST of Cla003525 vs. Swiss-Prot
Match: 3MMP_ARATH (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana GN=3MMP PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.0e-49
Identity = 98/188 (52.13%), Postives = 123/188 (65.43%), Query Frame = 1


Query: 52  RPHATAHYVFFPGKPRWMRRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAFSKWAHVIPV 111
           R HA  HY FFPG+PRW R     LTYAF   N ++    ++VK+VF +AF++W  V P+
Sbjct: 152 RFHAVKHYSFFPGEPRWPRNR-RDLTYAFDPRNALT----EEVKSVFSRAFTRWEEVTPL 211

Query: 112 SFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEK 171
           +F   + +  +DI IGFY G+H DG+ FDG +  LAH+FSP  G  HLD  E W V  E 
Sbjct: 212 TFTRVERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEG 271

Query: 172 EKSAV----AVDLESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDVEGVQA 231
               +    AVDLESVA HEIGHLLGLGHSSV+ S+MYP+++   +K +L  DDVEGVQ 
Sbjct: 272 GDGFISVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQY 331

Query: 232 LYGSNPNF 236
           LYG+NPNF
Sbjct: 332 LYGANPNF 334

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BLAST of Cla003525 vs. Swiss-Prot
Match: 5MMP_ARATH (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana GN=5MMP PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 7.9e-45
Identity = 90/184 (48.91%), Postives = 120/184 (65.22%), Query Frame = 1


Query: 56  TAHYVFFPGKPRWMRRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAFSKWAHVIPVSFEE 115
           T  Y FFPGKPRW +R    LTYAF  +N +++    +VK VF +AF++WA V P++F  
Sbjct: 140 TEKYSFFPGKPRWPKRK-RDLTYAFAPQNNLTD----EVKRVFSRAFTRWAEVTPLNFTR 199

Query: 116 TDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSA 175
           ++    ADI IGF+ G+H DG+ FDG +G LAH+ SP  G LHLD  E W +   +    
Sbjct: 200 SESILRADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRR 259

Query: 176 V-----AVDLESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDVEGVQALYG 235
           +      VDLESVA HEIGHLLGLGHSSV++++M+P++   ++K  L  DD+EG+Q LYG
Sbjct: 260 ILPVTTVVDLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLYG 318

[Close]

BLAST of Cla003525 vs. TrEMBL
Match: A0A0A0L2Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117950 PE=3 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 2.6e-135
Identity = 241/278 (86.69%), Postives = 254/278 (91.37%), Query Frame = 1


Query: 1   MFLPLLLVLFFILCTPPCLPSPTTLPQNPTAAVIYRSNSTLLRWRVSDTLHRPHATAHYV 60
           MFLPLLL+LFF LCTP CLP PTTLPQNPT+AVI+RS+S+        +LH PHAT  YV
Sbjct: 1   MFLPLLLLLFFFLCTPSCLPYPTTLPQNPTSAVIFRSDSS--------SLHNPHATERYV 60

Query: 61  FFPGKPRWMRRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAFSKWAHVIPVSFEETDDYG 120
           FFPGKPRW RRMPMVLTYAFFK+NWMSNLSL+DV+AVFRKAFSKWAHVIPVSFEETDDYG
Sbjct: 61  FFPGKPRWTRRMPMVLTYAFFKDNWMSNLSLEDVRAVFRKAFSKWAHVIPVSFEETDDYG 120

Query: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL 180
           YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL
Sbjct: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL 180

Query: 181 ESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESL 240
           ESVATHEIGHLLGLGHSSV+ESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESL
Sbjct: 181 ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESL 240

Query: 241 ELKSDTSASQPPVSTCTIACHFSLAFFLVSTYHFILFP 279
           EL+SDTSASQPPVSTCT+AC FSL FF      F+ FP
Sbjct: 241 ELESDTSASQPPVSTCTLACPFSLPFF------FLFFP 264

[Close]

BLAST of Cla003525 vs. TrEMBL
Match: D7SLT8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02280 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 2.6e-79
Identity = 145/208 (69.71%), Postives = 169/208 (81.25%), Query Frame = 1


Query: 43  RWRVSDTLHRPHATAHYVFFPGKPRWMRRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAF 102
           R  + D +   HA  HYV+FPGKPRW R +PM LTYAF  EN +  LSL+D++  F+ AF
Sbjct: 122 RCGMRDAMQPMHAAMHYVYFPGKPRWARPIPMTLTYAFSPENLVGYLSLEDIRGAFKLAF 181

Query: 103 SKWAHVIPVSFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAA 162
           ++WA VIPVSF ETD Y +ADIKIGFYRGDH DG+ FDGVLGVLAH+FSPE G+ HLDAA
Sbjct: 182 ARWASVIPVSFSETDTYSFADIKIGFYRGDHGDGEPFDGVLGVLAHAFSPESGKFHLDAA 241

Query: 163 ETWAVDFEKEKSAVAVDLESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDV 222
           ETWAVD E EKS VA+DLESVATHEIGHLLGL HS VKESVMYPSLKPR KKA+L++DD+
Sbjct: 242 ETWAVDLESEKSTVAIDLESVATHEIGHLLGLAHSPVKESVMYPSLKPRAKKADLKLDDI 301

Query: 223 EGVQALYGSNPNFKFESLELKSDTSASQ 251
           E VQALYGSNPNFKF S  ++SD S++Q
Sbjct: 302 EAVQALYGSNPNFKFAS-SMESDISSNQ 328

[Close]

BLAST of Cla003525 vs. TrEMBL
Match: A5BWA2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024635 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 2.6e-79
Identity = 145/208 (69.71%), Postives = 170/208 (81.73%), Query Frame = 1


Query: 43  RWRVSDTLHRPHATAHYVFFPGKPRWMRRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAF 102
           R  + D +   HA  HYV+FPGKPRW R +PM LTYAF  EN +  LSL+D++  F++AF
Sbjct: 122 RCGMRDAMQPMHAAMHYVYFPGKPRWARPIPMTLTYAFSPENLVGYLSLEDIRGGFKRAF 181

Query: 103 SKWAHVIPVSFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAA 162
           ++WA VIPVSF ETD Y +ADIKIGFYRGDH DG+ FDGVLGVLAH+FSPE G+ HLDAA
Sbjct: 182 ARWASVIPVSFTETDTYSFADIKIGFYRGDHGDGEPFDGVLGVLAHAFSPESGKFHLDAA 241

Query: 163 ETWAVDFEKEKSAVAVDLESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDV 222
           ETWAVD E EKS VA+DLESVATHEIGHLLGL HS VKESVMYPSLKPR KKA+L++DD+
Sbjct: 242 ETWAVDLESEKSTVAIDLESVATHEIGHLLGLAHSPVKESVMYPSLKPRAKKADLKLDDI 301

Query: 223 EGVQALYGSNPNFKFESLELKSDTSASQ 251
           E VQALYGSNPNFKF S  ++SD S++Q
Sbjct: 302 EAVQALYGSNPNFKFAS-SMESDISSNQ 328

[Close]

BLAST of Cla003525 vs. TrEMBL
Match: B9RD50_RICCO (Metalloendoproteinase 1, putative OS=Ricinus communis GN=RCOM_1609630 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.4e-77
Identity = 145/208 (69.71%), Postives = 168/208 (80.77%), Query Frame = 1


Query: 43  RWRVSDTLHRPHATAHYVFFPGKPRWMRRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAF 102
           R  V DT H+ H + +YV+FPGKPRW R +PM LTYAF  EN +S L + D++ VF++AF
Sbjct: 127 RCGVPDTGHKLHVSRNYVYFPGKPRWGRDIPMNLTYAFSPENLISYLKISDLQEVFKRAF 186

Query: 103 SKWAHVIPVSFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAA 162
           S+W  VIPVSF E  DY YADIKIGFY GDH DG+ FDG+LGVLAHSFSPE G+ HLDAA
Sbjct: 187 SRWESVIPVSFIEISDYSYADIKIGFYNGDHGDGEPFDGILGVLAHSFSPESGKFHLDAA 246

Query: 163 ETWAVDFEKEKSAVAVDLESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDV 222
           ETWAVDFE EKS VAVDLESVA HEIGHLLGL HSSVKE+VMYPSLKPR+KK +L VDD+
Sbjct: 247 ETWAVDFESEKSKVAVDLESVAVHEIGHLLGLAHSSVKEAVMYPSLKPRKKKVDLSVDDI 306

Query: 223 EGVQALYGSNPNFKFESLELKSDTSASQ 251
           +GVQALYGSNPN+   SL L+SD S +Q
Sbjct: 307 QGVQALYGSNPNYTLGSL-LESDISTNQ 333

[Close]

BLAST of Cla003525 vs. TrEMBL
Match: W9QHU8_9ROSA (Metalloendoproteinase 1 OS=Morus notabilis GN=L484_021785 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.4e-77
Identity = 142/197 (72.08%), Postives = 166/197 (84.26%), Query Frame = 1


Query: 54  HATAHYVFFPGKPRWMRRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAFSKWAHVIPVSF 113
           H T HY++FPGKPRW RRMPM LTYAF  +  +  LS  ++KAVF++AF++WA VIPVSF
Sbjct: 88  HGTRHYMYFPGKPRWARRMPMKLTYAFSPDYTIRYLSSSEIKAVFKRAFARWASVIPVSF 147

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEK 173
            ET+DY YADIKIGFY G+H D + FDGVLGVLAHSFSPE G++HLDAAETWAVDF  EK
Sbjct: 148 VETEDYVYADIKIGFYHGEHGDSEPFDGVLGVLAHSFSPENGKVHLDAAETWAVDFRSEK 207

Query: 174 SAVAVDLESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDVEGVQALYGSNP 233
           SAVA+DLESVATHEIGHLLGL HSSVKE+VMYP+LKPREKK +L++DD+EGVQALYGSNP
Sbjct: 208 SAVAMDLESVATHEIGHLLGLAHSSVKEAVMYPTLKPREKKLDLQLDDIEGVQALYGSNP 267

Query: 234 NFKFESLELKSDTSASQ 251
           NF   SL  +SD S +Q
Sbjct: 268 NFNIGSLS-ESDISTNQ 283

[Close]

BLAST of Cla003525 vs. NCBI nr
Match: gi|659074776|ref|XP_008437790.1| (PREDICTED: metalloendoproteinase 1 [Cucumis melo])

HSP 1 Score: 502.7 bits (1293), Expect = 4.2e-139
Identity = 250/282 (88.65%), Postives = 262/282 (92.91%), Query Frame = 1


Query: 1   MFLPLLLVLFFILCTPPCLPSPTTLPQNPTAAVI-YRSNSTLL--RWRVSDTLHRPHATA 60
           MFLPLLL+LFF LCTP CLP PTTLPQN TAAVI +RSNS+ L  R R+++TLH PHAT 
Sbjct: 1   MFLPLLLLLFFFLCTPSCLPYPTTLPQNSTAAVIIFRSNSSSLQGRRRLTETLHNPHATE 60

Query: 61  HYVFFPGKPRWMRRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAFSKWAHVIPVSFEETD 120
            YVFFPGKPRW RRMPMVLTYAFFKENWMSNLSLKDV+AVFRKAFSKWAHVIPVSFEETD
Sbjct: 61  RYVFFPGKPRWARRMPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETD 120

Query: 121 DYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVA 180
           DYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVA
Sbjct: 121 DYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVA 180

Query: 181 VDLESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKF 240
           VDLESVATHEIGHLLGLGHSSV+ESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKF
Sbjct: 181 VDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKF 240

Query: 241 ESLELKSDTSASQPPVSTCTIACHFSLA-FFLVSTYHFILFP 279
           ESLEL+SDTS +QPPVSTCT+AC FSL  FFL+  YHF LFP
Sbjct: 241 ESLELESDTSDTQPPVSTCTMACPFSLPFFFLIFPYHFFLFP 282

[Close]

BLAST of Cla003525 vs. NCBI nr
Match: gi|778676675|ref|XP_011650638.1| (PREDICTED: metalloendoproteinase 1 [Cucumis sativus])

HSP 1 Score: 489.6 bits (1259), Expect = 3.7e-135
Identity = 241/278 (86.69%), Postives = 254/278 (91.37%), Query Frame = 1


Query: 1   MFLPLLLVLFFILCTPPCLPSPTTLPQNPTAAVIYRSNSTLLRWRVSDTLHRPHATAHYV 60
           MFLPLLL+LFF LCTP CLP PTTLPQNPT+AVI+RS+S+        +LH PHAT  YV
Sbjct: 1   MFLPLLLLLFFFLCTPSCLPYPTTLPQNPTSAVIFRSDSS--------SLHNPHATERYV 60

Query: 61  FFPGKPRWMRRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAFSKWAHVIPVSFEETDDYG 120
           FFPGKPRW RRMPMVLTYAFFK+NWMSNLSL+DV+AVFRKAFSKWAHVIPVSFEETDDYG
Sbjct: 61  FFPGKPRWTRRMPMVLTYAFFKDNWMSNLSLEDVRAVFRKAFSKWAHVIPVSFEETDDYG 120

Query: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL 180
           YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL
Sbjct: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL 180

Query: 181 ESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESL 240
           ESVATHEIGHLLGLGHSSV+ESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESL
Sbjct: 181 ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESL 240

Query: 241 ELKSDTSASQPPVSTCTIACHFSLAFFLVSTYHFILFP 279
           EL+SDTSASQPPVSTCT+AC FSL FF      F+ FP
Sbjct: 241 ELESDTSASQPPVSTCTLACPFSLPFF------FLFFP 264

[Close]

BLAST of Cla003525 vs. NCBI nr
Match: gi|147812598|emb|CAN66084.1| (hypothetical protein VITISV_024635 [Vitis vinifera])

HSP 1 Score: 303.5 bits (776), Expect = 3.7e-79
Identity = 145/208 (69.71%), Postives = 170/208 (81.73%), Query Frame = 1


Query: 43  RWRVSDTLHRPHATAHYVFFPGKPRWMRRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAF 102
           R  + D +   HA  HYV+FPGKPRW R +PM LTYAF  EN +  LSL+D++  F++AF
Sbjct: 122 RCGMRDAMQPMHAAMHYVYFPGKPRWARPIPMTLTYAFSPENLVGYLSLEDIRGGFKRAF 181

Query: 103 SKWAHVIPVSFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAA 162
           ++WA VIPVSF ETD Y +ADIKIGFYRGDH DG+ FDGVLGVLAH+FSPE G+ HLDAA
Sbjct: 182 ARWASVIPVSFTETDTYSFADIKIGFYRGDHGDGEPFDGVLGVLAHAFSPESGKFHLDAA 241

Query: 163 ETWAVDFEKEKSAVAVDLESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDV 222
           ETWAVD E EKS VA+DLESVATHEIGHLLGL HS VKESVMYPSLKPR KKA+L++DD+
Sbjct: 242 ETWAVDLESEKSTVAIDLESVATHEIGHLLGLAHSPVKESVMYPSLKPRAKKADLKLDDI 301

Query: 223 EGVQALYGSNPNFKFESLELKSDTSASQ 251
           E VQALYGSNPNFKF S  ++SD S++Q
Sbjct: 302 EAVQALYGSNPNFKFAS-SMESDISSNQ 328

[Close]

BLAST of Cla003525 vs. NCBI nr
Match: gi|225453480|ref|XP_002274477.1| (PREDICTED: metalloendoproteinase 1 [Vitis vinifera])

HSP 1 Score: 303.5 bits (776), Expect = 3.7e-79
Identity = 145/208 (69.71%), Postives = 169/208 (81.25%), Query Frame = 1


Query: 43  RWRVSDTLHRPHATAHYVFFPGKPRWMRRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAF 102
           R  + D +   HA  HYV+FPGKPRW R +PM LTYAF  EN +  LSL+D++  F+ AF
Sbjct: 122 RCGMRDAMQPMHAAMHYVYFPGKPRWARPIPMTLTYAFSPENLVGYLSLEDIRGAFKLAF 181

Query: 103 SKWAHVIPVSFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAA 162
           ++WA VIPVSF ETD Y +ADIKIGFYRGDH DG+ FDGVLGVLAH+FSPE G+ HLDAA
Sbjct: 182 ARWASVIPVSFSETDTYSFADIKIGFYRGDHGDGEPFDGVLGVLAHAFSPESGKFHLDAA 241

Query: 163 ETWAVDFEKEKSAVAVDLESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDV 222
           ETWAVD E EKS VA+DLESVATHEIGHLLGL HS VKESVMYPSLKPR KKA+L++DD+
Sbjct: 242 ETWAVDLESEKSTVAIDLESVATHEIGHLLGLAHSPVKESVMYPSLKPRAKKADLKLDDI 301

Query: 223 EGVQALYGSNPNFKFESLELKSDTSASQ 251
           E VQALYGSNPNFKF S  ++SD S++Q
Sbjct: 302 EAVQALYGSNPNFKFAS-SMESDISSNQ 328

[Close]

BLAST of Cla003525 vs. NCBI nr
Match: gi|764627016|ref|XP_011469197.1| (PREDICTED: metalloendoproteinase 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 301.6 bits (771), Expect = 1.4e-78
Identity = 151/252 (59.92%), Postives = 184/252 (73.02%), Query Frame = 1


Query: 1   MFLPLLLVLFFILCTPPCLPSPTTLPQNPTAAVIYRSNSTLLRWRVSDTLHRPHATAHYV 60
           +F   L +  F L  PPCLP+ T       + +I           ++ +    H   HYV
Sbjct: 4   LFSCSLSLFIFFLNFPPCLPTRTATKNTGISEIIAAPRCGAPPPDMNSSTSCLHGMKHYV 63

Query: 61  FFPGKPRWM-RRMPMVLTYAFFKENWMSNLSLKDVKAVFRKAFSKWAHVIPVSFEETDDY 120
           +FPGKPRW+ R +PM LTYAF  EN +S LS  D++  F+++F +W  VIPVSF ET+DY
Sbjct: 64  YFPGKPRWVPRTIPMKLTYAFSPENMISYLSSSDIRDAFKRSFDRWGSVIPVSFSETEDY 123

Query: 121 GYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVD 180
           G++DIKIGFY GDH DG+ FDGVLG+LAHSFSPE GRLHLD AETWAVDF  EKS VAVD
Sbjct: 124 GFSDIKIGFYAGDHGDGEPFDGVLGILAHSFSPETGRLHLDVAETWAVDFRLEKSPVAVD 183

Query: 181 LESVATHEIGHLLGLGHSSVKESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFES 240
           LESVATHEIGHLLGLGHS+VKE+VMYP+L+PREKK +L+VDDVEGVQALYGSNPN+   +
Sbjct: 184 LESVATHEIGHLLGLGHSTVKEAVMYPNLRPREKKVDLQVDDVEGVQALYGSNPNYTGGA 243

Query: 241 L-ELKSDTSASQ 251
           L EL+  TS +Q
Sbjct: 244 LSELEYSTSTNQ 255

The following BLAST results are available for this feature:

BLAST of Cla003525 vs. Swiss-Prot


Match Name	E-value	Identity	Description
4MMP_ARATH	6.2e-74	68.37	Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana GN=4MMP PE=1 SV=1	[more]
1MMP_ARATH	2.0e-64	63.92	Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana GN=1MMP PE=1 SV=1	[more]
2MMP_ARATH	1.4e-49	52.97	Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana GN=2MMP PE=1 SV=1	[more]
3MMP_ARATH	4.0e-49	52.13	Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana GN=3MMP PE=1 SV=1	[more]
5MMP_ARATH	7.9e-45	48.91	Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana GN=5MMP PE=1 SV=1	[more]

BLAST of Cla003525 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2Y8_CUCSA	2.6e-135	86.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117950 PE=3 SV=1	[more]
D7SLT8_VITVI	2.6e-79	69.71	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02280 PE=3 SV=...	[more]
A5BWA2_VITVI	2.6e-79	69.71	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024635 PE=3 SV=1	[more]
B9RD50_RICCO	1.4e-77	69.71	Metalloendoproteinase 1, putative OS=Ricinus communis GN=RCOM_1609630 PE=3 SV=1	[more]
W9QHU8_9ROSA	2.4e-77	72.08	Metalloendoproteinase 1 OS=Morus notabilis GN=L484_021785 PE=3 SV=1	[more]

BLAST of Cla003525 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074776\|ref\|XP_008437790.1\|	4.2e-139	88.65	PREDICTED: metalloendoproteinase 1 [Cucumis melo]	[more]
gi\|778676675\|ref\|XP_011650638.1\|	3.7e-135	86.69	PREDICTED: metalloendoproteinase 1 [Cucumis sativus]	[more]
gi\|147812598\|emb\|CAN66084.1\|	3.7e-79	69.71	hypothetical protein VITISV_024635 [Vitis vinifera]	[more]
gi\|225453480\|ref\|XP_002274477.1\|	3.7e-79	69.71	PREDICTED: metalloendoproteinase 1 [Vitis vinifera]	[more]
gi\|764627016\|ref\|XP_011469197.1\|	1.4e-78	59.92	PREDICTED: metalloendoproteinase 1 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001818	Pept_M10_metallopeptidase
IPR006026	Peptidase_Metallo
IPR021190	Pept_M10A
IPR024079	MetalloPept_cat_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0004222	metalloendopeptidase activity
GO:0008270	zinc ion binding
GO:0008237	metallopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Cellular Component**
Term	Definition
GO:0031012	extracellular matrix

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0031012	extracellular matrix
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008237	metallopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla003525	Cla003525.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001818	Peptidase M10, metallopeptidase	PFAM	PF00413	Peptidase_M10	coord: 75..230 score: 4.9
IPR006026	Peptidase, metallopeptidase	SMART	SM00235	col_5	coord: 64..231 score: 3.7
IPR021190	Peptidase M10A	PRINTS	PR00138	MATRIXIN	coord: 122..150 score: 9.1E-31coord: 183..208 score: 9.1E-31coord: 217..230 score: 9.1E-31coord: 98..113 score: 9.1
IPR024079	Metallopeptidase, catalytic domain	GENE3D	G3DSA:3.40.390.10		coord: 49..234 score: 3.2
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 54..236 score: 3.3
None	No IPR available	PANTHER	PTHR10201:SF140	F20P5.11 PROTEIN	coord: 54..236 score: 3.3
None	No IPR available	unknown	SSF55486	Metalloproteases ("zincins"), catalytic domain	coord: 61..235 score: 1.32

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla003525	Cla97C01G011840	Watermelon (97103) v2	wmwmbB250
Cla003525	ClCG01G012650	Watermelon (Charleston Gray)	wcgwmB158

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla003525	Cucumber (Chinese Long) v3	cucwmB049
Cla003525	Watermelon (97103) v2	wmwmbB243
Cla003525	Wax gourd	wgowmB506
Cla003525	Wax gourd	wgowmB510
Cla003525	Cucumber (Gy14) v1	cgywmB392
Cla003525	Cucurbita maxima (Rimu)	cmawmB168
Cla003525	Cucurbita maxima (Rimu)	cmawmB199
Cla003525	Cucurbita moschata (Rifu)	cmowmB154
Cla003525	Cucurbita moschata (Rifu)	cmowmB186
Cla003525	Melon (DHL92) v3.5.1	mewmB159
Cla003525	Cucumber (Chinese Long) v2	cuwmB042
Cla003525	Cucurbita pepo (Zucchini)	cpewmB518
Cla003525	Bottle gourd (USVL1VR-Ls)	lsiwmB260
Cla003525	Cucumber (Gy14) v2	cgybwmB043
Cla003525	Melon (DHL92) v3.6.1	medwmB155