Cla003516 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAGCAAGAACCCGAATGGCAGCATACATTCAGCCCAATTAGCAATATTACAAACGAAATCAAACCAGGACCTAAAAAGTTCGGTGTCAAACCAGAAGTTGCCGCTAAATTAGATACAAGACCACCTCCATCCGACATATTAGAAAAAGCCAAAGCTGCCATTGCTTCAGCTGAGCGCGCCACTGCAGCAGCCCGAGTAGCTGCTGAACTAGCAAATGTCAACCTTGGAGCAATGAAGTTAGAAGGCGGACAAACTTCGGAGTGTTGA ATGGGAAAGCAAGAACCCGAATGGCAGCATACATTCAGCCCAATTAGCAATATTACAAACGAAATCAAACCAGGACCTAAAAAGTTCGGTGTCAAACCAGAAGTTGCCGCTAAATTAGATACAAGACCACCTCCATCCGACATATTAGAAAAAGCCAAAGCTGCCATTGCTTCAGCTGAGCGCGCCACTGCAGCAGCCCGAGTAGCTGCTGAACTAGCAAATGTCAACCTTGGAGCAATGAAGTTAGAAGGCGGACAAACTTCGGAGTGTTGA ATGGGAAAGCAAGAACCCGAATGGCAGCATACATTCAGCCCAATTAGCAATATTACAAACGAAATCAAACCAGGACCTAAAAAGTTCGGTGTCAAACCAGAAGTTGCCGCTAAATTAGATACAAGACCACCTCCATCCGACATATTAGAAAAAGCCAAAGCTGCCATTGCTTCAGCTGAGCGCGCCACTGCAGCAGCCCGAGTAGCTGCTGAACTAGCAAATGTCAACCTTGGAGCAATGAAGTTAGAAGGCGGACAAACTTCGGAGTGTTGA MGKQEPEWQHTFSPISNITNEIKPGPKKFGVKPEVAAKLDTRPPPSDILEKAKAAIASAERATAAARVAAELANVNLGAMKLEGGQTSEC
BLAST of Cla003516 vs. TrEMBL
Match: A0A0A0KMU2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G367190 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 2.5e-31 Identity = 75/90 (83.33%), Postives = 77/90 (85.56%), Query Frame = 1
BLAST of Cla003516 vs. TrEMBL
Match: A0A0B0MHH1_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_21801 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 7.0e-10 Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 1
BLAST of Cla003516 vs. TrEMBL
Match: A0A067KC50_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18335 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 4.6e-09 Identity = 43/90 (47.78%), Postives = 54/90 (60.00%), Query Frame = 1
BLAST of Cla003516 vs. TrEMBL
Match: A0A061ED43_THECC (Regulator of Vps4 activity in the MVB pathway protein OS=Theobroma cacao GN=TCM_009773 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 6.0e-09 Identity = 41/86 (47.67%), Postives = 51/86 (59.30%), Query Frame = 1
BLAST of Cla003516 vs. TrEMBL
Match: A0A059BF26_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02315 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.0e-08 Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 1
BLAST of Cla003516 vs. NCBI nr
Match: gi|659131631|ref|XP_008465781.1| (PREDICTED: IST1 homolog [Cucumis melo]) HSP 1 Score: 148.7 bits (374), Expect = 5.0e-33 Identity = 75/90 (83.33%), Postives = 78/90 (86.67%), Query Frame = 1
BLAST of Cla003516 vs. NCBI nr
Match: gi|449445148|ref|XP_004140335.1| (PREDICTED: IST1 homolog [Cucumis sativus]) HSP 1 Score: 142.5 bits (358), Expect = 3.6e-31 Identity = 75/90 (83.33%), Postives = 77/90 (85.56%), Query Frame = 1
BLAST of Cla003516 vs. NCBI nr
Match: gi|1009155255|ref|XP_015895613.1| (PREDICTED: IST1 homolog [Ziziphus jujuba]) HSP 1 Score: 71.6 bits (174), Expect = 7.7e-10 Identity = 41/78 (52.56%), Postives = 52/78 (66.67%), Query Frame = 1
BLAST of Cla003516 vs. NCBI nr
Match: gi|728814754|gb|KHG01623.1| (Uncharacterized protein F383_21801 [Gossypium arboreum]) HSP 1 Score: 71.2 bits (173), Expect = 1.0e-09 Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 1
BLAST of Cla003516 vs. NCBI nr
Match: gi|802681321|ref|XP_012082098.1| (PREDICTED: IST1 homolog [Jatropha curcas]) HSP 1 Score: 68.6 bits (166), Expect = 6.6e-09 Identity = 43/90 (47.78%), Postives = 54/90 (60.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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