Cla003329 (gene) Watermelon (97103) v1

Overview
NameCla003329
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionRING zinc finger protein-like (AHRD V1 **-* Q8LR65_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type
LocationChr9 : 33440128 .. 33441564 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAATTCTGGTTATTTCGTTTCGGGGCCGTCGTGTAACTGTGGTGGCACTGCTTCCTTTATCTCGAATTCGTTGGTGGAAGAAGATGGTGCAGGTGCGGATGTTAGAGACGACAATTCTGTTGCTCTGCCTGCATCTTTCTGGGTTAGGATAGCGATGAGAGTGTCCAGAGCCAGGTGGTTCATTTTCTTACGAAGGGTATTTCACTACCAGAATGGATCAAGATCGGATCTCAGGTCTGATCCTTTCAATTCTATCTCGTGGATGGCTATGGAGCTGGTAGCTATGGTGTTTCAGCTGGCCATCACAGTGTTTTTTCTTGCCATTTCAGAGACGGAGAAGCCAGTTTGGCCTATGAGACTGTGGATAGTTGGTTATGATCTAGGATGCATTCTTAGTTTGTTGCTTCTCTATGGGCGATATTGGCATCTTTATTTAATGCGTGGAGACCATGTCGGCCTTTCTGAGACCGAGCAGCGGAGGAGCAGTCAAGCATCAAGGTATTCCTTAATATGCTACCTTCTCTGTATTAGAGTGGTTAAAGCAGCTGACGGAGGATAAACAATGTCTATCCTCCTTTTCCAATCGTTAATTCAGGGAAAAAGTCTATCTAAACTTTACTTGGCAATACCCAAAACTCAATGTAAGAAGGTTTAAAATCATAAATCTAGTTTAAGAAATTATTATTTTAGAACATGCCATCATCAATCCTAGACACAGGAGACATGGGAAGTTAGCTTTGTCTGGAAAATTTGGAACTGACTCATGTAGAATGTGGATGCAAATTTTGCAACTCTATCTTCAACTTCTGTTCAATACATTGTGCAGGAGCTTGCGTTTGATGAACAAATGCCGGTCATCTCTTGAACTTTTCTTTGCAATATGGTTCGTAATGGGTAATGTTTGGATTGTCGATTCTCGCTTCAGTTCGTTCCAAAGAGCTCCCAAGCTTCATCTGCTATGTGTCTTCCTATTAGTTTGGAATGCCATCTGCTACTCCTTTCCGTTCATTCTCTTTCTGCTGCTATGTTGCTGTGTGCCATTGGTTAGTAGCCTTCTAGGATATAACATTAACATGGCATCAACCGACAAAGGAGCATCGGATGATCAAATATCTGAGCTACCGTGCTGGAGATATAAAGTGAGCTCAATGCAACCTGATAGTAACAAAGGACTTCCAAAAGAGGATCCAGTAAGTAAATCAATATACTTGATGGATCAACACTTTTATCTTCAAAAGAAAGTAGATTTCATTGCTGAGTTTGTTTTCCTCTGCTGTTTTTTTAGGAATGTTGCATTTGCCTTGTCAAGTACAGAGATGAAGAAGAAGTAAGACAGTTACCTTGTTCCCATTTGTTCCATCTCAAGTGTGTAGATAAGTGGCTTTCAATCACATCTTCTTGCCCTCTCTGTAAGCAACAACTTCAAAAATAG

mRNA sequence

ATGATCAATTCTGGTTATTTCGTTTCGGGGCCGTCGTGTAACTGTGGTGGCACTGCTTCCTTTATCTCGAATTCGTTGGTGGAAGAAGATGGTGCAGGTGCGGATGTTAGAGACGACAATTCTGTTGCTCTGCCTGCATCTTTCTGGGTTAGGATAGCGATGAGAGTGTCCAGAGCCAGGTGGTTCATTTTCTTACGAAGGGTATTTCACTACCAGAATGGATCAAGATCGGATCTCAGGTCTGATCCTTTCAATTCTATCTCGTGGATGGCTATGGAGCTGGTAGCTATGGTGTTTCAGCTGGCCATCACAGTGTTTTTTCTTGCCATTTCAGAGACGGAGAAGCCAGTTTGGCCTATGAGACTGTGGATAGTTGGTTATGATCTAGGATGCATTCTTAGTTTGTTGCTTCTCTATGGGCGATATTGGCATCTTTATTTAATGCGTGGAGACCATGTCGGCCTTTCTGAGACCGAGCAGCGGAGGAGCAGTCAAGCATCAAGGAGCTTGCGTTTGATGAACAAATGCCGGTCATCTCTTGAACTTTTCTTTGCAATATGGTTCGTAATGGGTAATGTTTGGATTGTCGATTCTCGCTTCAGTTCGTTCCAAAGAGCTCCCAAGCTTCATCTGCTATGTGTCTTCCTATTAGTTTGGAATGCCATCTGCTACTCCTTTCCGTTCATTCTCTTTCTGCTGCTATGTTGCTGTGTGCCATTGGTTAGTAGCCTTCTAGGATATAACATTAACATGGCATCAACCGACAAAGGAGCATCGGATGATCAAATATCTGAGCTACCGTGCTGGAGATATAAAGTGAGCTCAATGCAACCTGATAGTAACAAAGGACTTCCAAAAGAGGATCCAGAATGTTGCATTTGCCTTGTCAAGTACAGAGATGAAGAAGAAGTAAGACAGTTACCTTGTTCCCATTTGTTCCATCTCAAGTGTGTAGATAAGTGGCTTTCAATCACATCTTCTTGCCCTCTCTGTAAGCAACAACTTCAAAAATAG

Coding sequence (CDS)

ATGATCAATTCTGGTTATTTCGTTTCGGGGCCGTCGTGTAACTGTGGTGGCACTGCTTCCTTTATCTCGAATTCGTTGGTGGAAGAAGATGGTGCAGGTGCGGATGTTAGAGACGACAATTCTGTTGCTCTGCCTGCATCTTTCTGGGTTAGGATAGCGATGAGAGTGTCCAGAGCCAGGTGGTTCATTTTCTTACGAAGGGTATTTCACTACCAGAATGGATCAAGATCGGATCTCAGGTCTGATCCTTTCAATTCTATCTCGTGGATGGCTATGGAGCTGGTAGCTATGGTGTTTCAGCTGGCCATCACAGTGTTTTTTCTTGCCATTTCAGAGACGGAGAAGCCAGTTTGGCCTATGAGACTGTGGATAGTTGGTTATGATCTAGGATGCATTCTTAGTTTGTTGCTTCTCTATGGGCGATATTGGCATCTTTATTTAATGCGTGGAGACCATGTCGGCCTTTCTGAGACCGAGCAGCGGAGGAGCAGTCAAGCATCAAGGAGCTTGCGTTTGATGAACAAATGCCGGTCATCTCTTGAACTTTTCTTTGCAATATGGTTCGTAATGGGTAATGTTTGGATTGTCGATTCTCGCTTCAGTTCGTTCCAAAGAGCTCCCAAGCTTCATCTGCTATGTGTCTTCCTATTAGTTTGGAATGCCATCTGCTACTCCTTTCCGTTCATTCTCTTTCTGCTGCTATGTTGCTGTGTGCCATTGGTTAGTAGCCTTCTAGGATATAACATTAACATGGCATCAACCGACAAAGGAGCATCGGATGATCAAATATCTGAGCTACCGTGCTGGAGATATAAAGTGAGCTCAATGCAACCTGATAGTAACAAAGGACTTCCAAAAGAGGATCCAGAATGTTGCATTTGCCTTGTCAAGTACAGAGATGAAGAAGAAGTAAGACAGTTACCTTGTTCCCATTTGTTCCATCTCAAGTGTGTAGATAAGTGGCTTTCAATCACATCTTCTTGCCCTCTCTGTAAGCAACAACTTCAAAAATAG

Protein sequence

MINSGYFVSGPSCNCGGTASFISNSLVEEDGAGADVRDDNSVALPASFWVRIAMRVSRARWFIFLRRVFHYQNGSRSDLRSDPFNSISWMAMELVAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCILSLLLLYGRYWHLYLMRGDHVGLSETEQRRSSQASRSLRLMNKCRSSLELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPLVSSLLGYNINMASTDKGASDDQISELPCWRYKVSSMQPDSNKGLPKEDPECCICLVKYRDEEEVRQLPCSHLFHLKCVDKWLSITSSCPLCKQQLQK
Homology
[Close]
BLAST of Cla003329 vs. Swiss-Prot
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.6e-31
Identity = 84/268 (31.34%), Postives = 130/268 (48.51%), Query Frame = 1 

Query: 101 LAITVFFLAISETEKPVWPMRLWIVGYDLGCILSLLLLYGRYWHLYLMRGDHVGLSETEQ 160
           +AI V  L +S  EKP  P+R+W+VGY + C L +  +   Y      R    G      
Sbjct: 121 VAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHPEDGGGSGLT 180

Query: 161 RRSSQASRSLRLMNK----------CRSSLELFFAIWFVMGNVWIVDSRFSSFQRAPKLH 220
             SSQ   SL  +              S+  +F  IW+++G  W+     +    +P+L+
Sbjct: 181 NSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLY 240

Query: 221 LLCVFLLVWNAI----CYSFPFILFLLLCCCVPLVSSLLGYNINMASTDKGASDDQISEL 280
            LC+  L ++      C +   ++ L +CCC+P + ++L Y +   +  +GAS + I ++
Sbjct: 241 WLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAIL-YAV---ADQEGASKNDIDQM 300

Query: 281 PCWRY-KVSSMQPDSNKG----------------LPKEDPECCICLVKYRDEEEVRQLPC 338
           P +R+ K  +++  S K                 L  ED ECCICL +Y D  E+R+LPC
Sbjct: 301 PKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPC 360

[Close]
BLAST of Cla003329 vs. Swiss-Prot
Match: RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 1.3e-28
Identity = 81/290 (27.93%), Postives = 129/290 (44.48%), Query Frame = 1 

Query: 101 LAITVFFLAISETEKPVWPMRLWIVGYDLGCILSLLLLYGRYWHLYLMRG---------- 160
           + +    L +S  E P  P+R+WI+GY L C++ ++ +   Y      R           
Sbjct: 86  VVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSS 145

Query: 161 -----------DHVGLSETEQRRSSQASRSLRLMNKCRSSLE----LFFAIWFVMGNVWI 220
                      + +GLS     R  +  +     N     LE    +   IW+V+G  W+
Sbjct: 146 SSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWV 205

Query: 221 VDSRFSSFQRAPKLHLLCVFLLVWNAI----CYSFPFILFLLLCCCVPLVSSLLGYNINM 280
                   Q +P+L+ LC+  L ++      C +   ++ + +CCC+P + ++L Y +  
Sbjct: 206 SSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVL-YAV-- 265

Query: 281 ASTDKGASDDQISELPCWRYK---------VSSMQPDSNKG---------------LPKE 338
            +  +GAS + I +L  ++++         V   Q   + G               LP E
Sbjct: 266 -AEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPHE 325

[Close]
BLAST of Cla003329 vs. Swiss-Prot
Match: RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.8e-28
Identity = 79/283 (27.92%), Postives = 128/283 (45.23%), Query Frame = 1 

Query: 87  ISWMAMELVAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCILSLLLLYGRYWHLY 146
           I W A  ++A    L  TV        E+P  P+R+WI  Y L C+  ++L++  YW   
Sbjct: 82  ILWNAALVLASAVMLVGTV-------EERPNEPIRVWICVYGLQCLFHVVLVWSEYWRRN 141

Query: 147 LMRG-------DH--VGLSETEQRRSSQASRSLRLMNKCRSSLELFFAIWFVMGNVWIVD 206
             R        DH    +    ++ S   S +   + +C S   +   IW+++G  W+V+
Sbjct: 142 STRRARDLESYDHEDYNIEYDYEQDSDDNSTTYSFVKRCESINTVISFIWWIIGFYWVVE 201

Query: 207 SRFSSFQRAPKLHLLCVFLLV----WNAICYSFPFILFLLLCCCVPLVSSLLGYNINMAS 266
                   AP L+ L V  L     +   C     ++ + LCCC+P + +LL     +A 
Sbjct: 202 GGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALL---YAVAG 261

Query: 267 TDKGASDDQISELPCWRYK-------------------VSSMQPDSNKGLPKEDPECCIC 326
           T+ G S+ ++  LP +++K                   ++ +   + + L  ED +CCIC
Sbjct: 262 TE-GVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLAEDADCCIC 321

Query: 327 LVKYRDEEEVRQLPCSHLFHLKCVDKWLSITSSCPLCKQQLQK 338
           L  Y D  E+  LPC+H FH  C+ KWL + ++CPLCK  + K
Sbjct: 322 LSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILK 353

[Close]
BLAST of Cla003329 vs. Swiss-Prot
Match: RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.1e-27
Identity = 76/303 (25.08%), Postives = 138/303 (45.54%), Query Frame = 1 

Query: 90  MAMELVAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCILSLLLLYGRYWHLYLMR 149
           + +++V  +  +++    L +S  E P+ P+R+W++GY L C+L ++ +   Y      R
Sbjct: 101 VVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRR 160

Query: 150 GDHVGLSETEQRRSSQASRSLRLMNK-----------------------------CRSSL 209
            +    +   + RSS +S S   + +                               S+ 
Sbjct: 161 TNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESAN 220

Query: 210 ELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAI----CYSFPFILFLLLCC 269
            +F  IW+++G  W+        Q +P+++ L +  L ++      C +   ++ + +CC
Sbjct: 221 TMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCC 280

Query: 270 CVPLVSSLLGYNINMASTDKGASDDQISELPCWRYK----VSSMQPDSNKG--------- 329
           C+P + ++L Y +   +  +GAS + I +L  ++++     +    D  +G         
Sbjct: 281 CLPCIIAVL-YAV---ADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTEC 340

Query: 330 ---------LPKEDPECCICLVKYRDEEEVRQLPCSHLFHLKCVDKWLSITSSCPLCKQQ 338
                    L +ED ECCICL  Y D  E+R+LPC H FH  CVDKWL I ++CPLCK  
Sbjct: 341 GTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYN 399

[Close]
BLAST of Cla003329 vs. Swiss-Prot
Match: ATL37_ARATH (Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana GN=ATL37 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 6.2e-12
Identity = 41/126 (32.54%), Postives = 60/126 (47.62%), Query Frame = 1 

Query: 211 LLCVFLLVWNAICYSFPFILFLLLCCCVPLVSSLLGYNINMASTDKGASDDQISELPCWR 270
           LL +FLL+    C ++         CC+   +   G+ +  +   +G   D I   P + 
Sbjct: 54  LLSLFLLLLVVYCLNYG--------CCIE-ENETGGHEVLHSRVRRGIDKDVIESFPAFL 113

Query: 271 YKVSSMQPDSNKGLPKEDPECCICLVKYRDEEEVRQLP-CSHLFHLKCVDKWLSITSSCP 330
           Y         N G+     EC ICL ++ DEE +R +P CSH FH  C+D+WLS  S+CP
Sbjct: 114 YSEVKAFKIGNGGV-----ECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCP 165

Query: 331 LCKQQL 336
           +C+  L
Sbjct: 174 VCRANL 165

[Close]
BLAST of Cla003329 vs. TrEMBL
Match: A0A0A0K7S5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G278220 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 8.6e-178
Identity = 302/336 (89.88%), Postives = 317/336 (94.35%), Query Frame = 1 

Query: 1   MINSGYFVSGPSCNCGG-TASFISNSLVEEDGAGADVRDDNSVALPASFWVRIAMRVSRA 60
           MINS YFVSG SCNCGG T+ FI NSL+EED    DVRDDNSVALPASFWVR+AMRVSRA
Sbjct: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLRSDPFNSISWMAMELVAMVFQLAITVFFLAISETEKPVWP 120
           RWFIFLRRVFHYQNGSRS+L SDPFNS SWMA+ELVAMVFQL+ITVF LAISE EKP+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMRGDHVGLSETEQRRSSQASRSLRLMNKCRSS 180
           MRLWIVGYDLGCILSLLLLYGRYWHLYLM G+ VGLS+TEQRR+SQASRSL LMNKCR+S
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASRSLHLMNKCRTS 180

Query: 181 LELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP 240
           LELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP
Sbjct: 181 LELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP 240

Query: 241 LVSSLLGYNINMASTDKGASDDQISELPCWRYKVSSMQPDSNKGLPKEDPECCICLVKYR 300
           LVSSLLGYNI+MASTDK A DDQIS+LPCWRYKVSSMQPDSN+GLPKEDPECCICLVKYR
Sbjct: 241 LVSSLLGYNISMASTDKAALDDQISQLPCWRYKVSSMQPDSNEGLPKEDPECCICLVKYR 300

Query: 301 DEEEVRQLPCSHLFHLKCVDKWLSITSSCPLCKQQL 336
           DEEEVRQLPCSH FHL+CVDKWLSITSSCPLCKQQL
Sbjct: 301 DEEEVRQLPCSHFFHLRCVDKWLSITSSCPLCKQQL 336

[Close]
BLAST of Cla003329 vs. TrEMBL
Match: A0A0A0K4H0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G278230 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 1.4e-143
Identity = 251/347 (72.33%), Postives = 292/347 (84.15%), Query Frame = 1 

Query: 1   MINSGYFVSGPSCNCGGTASFISNSLVEEDGAGAD-VRDDNSVALPASFWVRIAMRVSRA 60
           MI+SG+F+SGPS N   T SFIS S+ EEDGA AD +R++ S ++P SFWV++AM++SRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSEEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLRSDPFNSISWMAMELVAMVFQLAITVFFLAISETEKPVWP 120
           RWFIFLRRVFHYQNGSRSDL  +PFNS SWMAMELVA++FQL I+ F LAIS+ EKPVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISAFTLAISQAEKPVWP 120

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMRGDHVGLS--ETEQRRSSQASRSLRLMNKCR 180
           MRLWI GYDLGC+LSLLLLYGR+ + YLM+ D   LS  E EQ+R++++SR   LMN+CR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQRDGNSLSDIEHEQQRTNESSRYSHLMNRCR 180

Query: 181 SSLELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCC 240
           +SL+LFFAIWFVMGN+W  DSR +SFQRAPKLHLLC FLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLVSSLLGYNINMASTDKGASDDQISELPCWRYKV-------SSMQPDSNKGLPKEDPE 300
           VPL+SSL GYNIN  ST+KGASDDQIS+LPCWRYK         S   +SN GL KEDPE
Sbjct: 241 VPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEANINPRSQLDNSNTGLLKEDPE 300

Query: 301 CCICLVKYRDEEEVRQLPCSHLFHLKCVDKWLSITSSCPLCKQQLQK 338
           CCICL KY D+EEVRQLPCSH+FHL+CVDKWL+ITSSCPLCKQQLQ+
Sbjct: 301 CCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAITSSCPLCKQQLQR 347

[Close]
BLAST of Cla003329 vs. TrEMBL
Match: A0A0B0PCR8_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_06014 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 7.9e-131
Identity = 218/327 (66.67%), Postives = 263/327 (80.43%), Query Frame = 1 

Query: 13  CNCGGTASFISNSLVEEDGAGADVRDDNSVALPASFWVRIAMRVSRARWFIFLRRVFHYQ 72
           CN    A F SN   EEDG  A  R  +  A  +S  +R+ MR+SRARWF FLRRVFHYQ
Sbjct: 13  CNSSTAAPFSSNPTGEEDGVAAGSRSRSPRAASSSILIRMVMRMSRARWFTFLRRVFHYQ 72

Query: 73  NGSRSDLRSDPFNSISWMAMELVAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCI 132
           NGSRSDL S+PFNS +WM +E +A+V Q+++  F LAI++ EKPVWPMR+WIVGYD+GC 
Sbjct: 73  NGSRSDLGSNPFNSSTWMMLEFLALVIQISVITFTLAIAKKEKPVWPMRIWIVGYDIGCA 132

Query: 133 LSLLLLYGRYWHLYLMRGDHVGLSETEQRRSSQASRSLRLMNKCRSSLELFFAIWFVMGN 192
           LSLLLLYGRY HL++ +GD  GL++ EQ+R+++ SRS  LMNKCR+SLELFFAIWFVMGN
Sbjct: 133 LSLLLLYGRYHHLHITQGDGFGLADVEQQRTNEESRSTHLMNKCRTSLELFFAIWFVMGN 192

Query: 193 VWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPLVSSLLGYNINMA 252
           VW+ DSRF SFQRAP LH+LC+ LL WNA+CYSFPF+LFLLLCCCVPL+SSLLGYN+NM 
Sbjct: 193 VWVFDSRFGSFQRAPNLHVLCISLLAWNALCYSFPFLLFLLLCCCVPLISSLLGYNMNMG 252

Query: 253 STDKGASDDQISELPCWRYK--VSSMQPDSNKGLPKEDPECCICLVKYRDEEEVRQLPCS 312
           STD+GASDDQIS LP WRYK   ++ + D N     EDPECCICL KY+D+EEVRQLPCS
Sbjct: 253 STDRGASDDQISGLPSWRYKEISTNSELDHNSDHTNEDPECCICLAKYKDKEEVRQLPCS 312

Query: 313 HLFHLKCVDKWLSITSSCPLCKQQLQK 338
           H+FHLKCVD+WL I S CPLCKQ+L++
Sbjct: 313 HMFHLKCVDQWLRIISCCPLCKQELER 339

[Close]
BLAST of Cla003329 vs. TrEMBL
Match: A0A061F5I6_THECC (RING/U-box domain-containing protein isoform 2 OS=Theobroma cacao GN=TCM_030584 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 3.9e-130
Identity = 219/331 (66.16%), Postives = 262/331 (79.15%), Query Frame = 1 

Query: 13  CNCGGTASFISNSLVEEDGAGADVRDDNSVALPASFWVRIAMRVSRARWFIFLRRVFHYQ 72
           CN     S+ SN    ED   A  R+ +  A P+S  +R+AMR+SRARWF FLRRVFHYQ
Sbjct: 13  CNSSTAVSYSSNPPGGEDRMAAGARNRSPRAPPSSLLIRMAMRISRARWFTFLRRVFHYQ 72

Query: 73  NGSRSDLRSDPFNSISWMAMELVAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCI 132
           NGSRSDL S+PFNS +WM +E +A+V Q++IT F LAIS+ E+PVWPMR+WIVGYD+GC+
Sbjct: 73  NGSRSDLGSNPFNSSTWMMLEFLALVIQISITTFTLAISKKERPVWPMRIWIVGYDIGCL 132

Query: 133 LSLLLLYGRYWHLYLMRGDHVGLSETEQRRSSQASRSLRLMNKCRSSLELFFAIWFVMGN 192
           LSLLLLYGRY HLY+ +GD  GLS+ EQ+R+++ SRS  LMNKCR+SLELFFAIWFVMGN
Sbjct: 133 LSLLLLYGRYHHLYITQGDGFGLSDVEQQRANEESRSSHLMNKCRTSLELFFAIWFVMGN 192

Query: 193 VWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPLVSSLLGYNINMA 252
           VW+ DSRF SF RAP LH+LC+ LL WNA+ YSFPF+LFLLLCCCVPL+SSLLGYN+NM 
Sbjct: 193 VWVFDSRFGSFHRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSLLGYNMNMG 252

Query: 253 STDKGASDDQISELPCWRYKVSSM------QPDSNKGLPKEDPECCICLVKYRDEEEVRQ 312
           S D+GASDDQIS LP WRYK  +         D N  L  EDPECCICL KY+D+EEVRQ
Sbjct: 253 SNDRGASDDQISRLPSWRYKEINTNLELDHDSDCNASLANEDPECCICLAKYKDKEEVRQ 312

Query: 313 LPCSHLFHLKCVDKWLSITSSCPLCKQQLQK 338
           LPCSH+FHLKCVD+WL I S CPLCKQ+L++
Sbjct: 313 LPCSHIFHLKCVDQWLRIISCCPLCKQELER 343

[Close]
BLAST of Cla003329 vs. TrEMBL
Match: A0A0D2R3G4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G102600 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 9.7e-129
Identity = 215/327 (65.75%), Postives = 260/327 (79.51%), Query Frame = 1 

Query: 13  CNCGGTASFISNSLVEEDGAGADVRDDNSVALPASFWVRIAMRVSRARWFIFLRRVFHYQ 72
           CN      F SN   EED   A  R+ +  A  +S  +R+ MR+SRARWF FLRRVFHYQ
Sbjct: 13  CNSSTAVPFSSNPTGEEDRVAAGSRNRSPRAASSSILIRMVMRMSRARWFTFLRRVFHYQ 72

Query: 73  NGSRSDLRSDPFNSISWMAMELVAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCI 132
           NGSRSDL S+PFNS +WM +E + +V Q++I  F LAI++ EKPVWPMR+WIVGYD+GC 
Sbjct: 73  NGSRSDLGSNPFNSSTWMMLEFLILVIQISIITFTLAIAKKEKPVWPMRIWIVGYDIGCA 132

Query: 133 LSLLLLYGRYWHLYLMRGDHVGLSETEQRRSSQASRSLRLMNKCRSSLELFFAIWFVMGN 192
           LSLLLLYGRY HL++ +GD  GL++ EQ+R+++ SRS  LMNKCR+SLELFFAIWFVMGN
Sbjct: 133 LSLLLLYGRYHHLHITQGDGFGLADVEQQRTNEESRSTHLMNKCRTSLELFFAIWFVMGN 192

Query: 193 VWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPLVSSLLGYNINMA 252
           VW+ DSRF SF RAP LH+LC+ LL WNA+CYSFPF+LFLLLCCCVPL+SSLLGYN+NM 
Sbjct: 193 VWVFDSRFGSFHRAPNLHVLCISLLAWNALCYSFPFLLFLLLCCCVPLISSLLGYNMNMG 252

Query: 253 STDKGASDDQISELPCWRYK--VSSMQPDSNKGLPKEDPECCICLVKYRDEEEVRQLPCS 312
           STD+GASDDQIS LP WRYK   ++ + D N     EDPECCICL KY+D+EEVRQLPCS
Sbjct: 253 STDRGASDDQISRLPSWRYKEISTNSELDHNSDHTNEDPECCICLAKYKDKEEVRQLPCS 312

Query: 313 HLFHLKCVDKWLSITSSCPLCKQQLQK 338
           H+FHLKCVD+WL I S CPLCKQ+L++
Sbjct: 313 HMFHLKCVDQWLRIISCCPLCKQELER 339

[Close]
BLAST of Cla003329 vs. NCBI nr
Match: gi|659126137|ref|XP_008463028.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis melo])

HSP 1 Score: 635.2 bits (1637), Expect = 6.6e-179
Identity = 305/338 (90.24%), Postives = 316/338 (93.49%), Query Frame = 1 

Query: 1   MINSGYFVSGPSCNCG-GTASFISNSLVEEDGAGADVRDDNSVALPASFWVRIAMRVSRA 60
           M+NS YFVSG SCNCG GT+ F  NSLVEEDGAG DVRDDNSVAL ASFWVR+AMRVSRA
Sbjct: 1   MVNSVYFVSGSSCNCGAGTSLFTPNSLVEEDGAGVDVRDDNSVALSASFWVRLAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLRSDPFNSISWMAMELVAMVFQLAITVFFLAISETEKPVWP 120
           RWFIFLRRVFHYQNGSRS+L SDPFNS SWMAMELVAMV QL ITVF LAISE EKP+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMELVAMVVQLVITVFVLAISEAEKPIWP 120

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMRGDHVGLSETEQRRSSQASRSLRLMNKCRSS 180
           MRLWIVGYDLGCILSLLLLYGRYWHLYLM G+ VGLS+TEQ+RSSQASR LRLMNKCR+S
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQQRSSQASRCLRLMNKCRTS 180

Query: 181 LELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP 240
           LELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNA CYSFPFILFLLLCCCVP
Sbjct: 181 LELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNATCYSFPFILFLLLCCCVP 240

Query: 241 LVSSLLGYNINMASTDKGASDDQISELPCWRYKVSSMQPDSNKGLPKEDPECCICLVKYR 300
           LVS LLGYNI+MASTDKGA DDQIS+LPCWRYKVSSMQPDSNK LPKEDPECCICLVKYR
Sbjct: 241 LVSRLLGYNISMASTDKGALDDQISQLPCWRYKVSSMQPDSNKRLPKEDPECCICLVKYR 300

Query: 301 DEEEVRQLPCSHLFHLKCVDKWLSITSSCPLCKQQLQK 338
           DEEEVRQLPCSH FHLKCVDKWLSITSSCPLCKQQLQK
Sbjct: 301 DEEEVRQLPCSHFFHLKCVDKWLSITSSCPLCKQQLQK 338

[Close]
BLAST of Cla003329 vs. NCBI nr
Match: gi|449463394|ref|XP_004149419.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis sativus])

HSP 1 Score: 630.9 bits (1626), Expect = 1.2e-177
Identity = 302/336 (89.88%), Postives = 317/336 (94.35%), Query Frame = 1 

Query: 1   MINSGYFVSGPSCNCGG-TASFISNSLVEEDGAGADVRDDNSVALPASFWVRIAMRVSRA 60
           MINS YFVSG SCNCGG T+ FI NSL+EED    DVRDDNSVALPASFWVR+AMRVSRA
Sbjct: 1   MINSVYFVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLRSDPFNSISWMAMELVAMVFQLAITVFFLAISETEKPVWP 120
           RWFIFLRRVFHYQNGSRS+L SDPFNS SWMA+ELVAMVFQL+ITVF LAISE EKP+WP
Sbjct: 61  RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMRGDHVGLSETEQRRSSQASRSLRLMNKCRSS 180
           MRLWIVGYDLGCILSLLLLYGRYWHLYLM G+ VGLS+TEQRR+SQASRSL LMNKCR+S
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASRSLHLMNKCRTS 180

Query: 181 LELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP 240
           LELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP
Sbjct: 181 LELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP 240

Query: 241 LVSSLLGYNINMASTDKGASDDQISELPCWRYKVSSMQPDSNKGLPKEDPECCICLVKYR 300
           LVSSLLGYNI+MASTDK A DDQIS+LPCWRYKVSSMQPDSN+GLPKEDPECCICLVKYR
Sbjct: 241 LVSSLLGYNISMASTDKAALDDQISQLPCWRYKVSSMQPDSNEGLPKEDPECCICLVKYR 300

Query: 301 DEEEVRQLPCSHLFHLKCVDKWLSITSSCPLCKQQL 336
           DEEEVRQLPCSH FHL+CVDKWLSITSSCPLCKQQL
Sbjct: 301 DEEEVRQLPCSHFFHLRCVDKWLSITSSCPLCKQQL 336

[Close]
BLAST of Cla003329 vs. NCBI nr
Match: gi|659126131|ref|XP_008463025.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X1 [Cucumis melo])

HSP 1 Score: 520.4 bits (1339), Expect = 2.4e-144
Identity = 254/347 (73.20%), Postives = 295/347 (85.01%), Query Frame = 1 

Query: 1   MINSGYFVSGPSCNCGGTASFISNSLVEEDGAGAD-VRDDNSVALPASFWVRIAMRVSRA 60
           MI+SG+F+SGPS N   T SFIS S+  EDGA AD +R++ S ++P SFWV++AM++SRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLRSDPFNSISWMAMELVAMVFQLAITVFFLAISETEKPVWP 120
           RWFIFLRRVFHYQNGSRSDL  +PFNS  WMAMELVA++FQL I+VF LAIS+ EKPVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMRGDHVGLS--ETEQRRSSQASRSLRLMNKCR 180
           MRLWI GYDLGC+LSLLLLYGR+ + YLM+G+   LS  E EQ+RS+++SR   LMN+CR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR 180

Query: 181 SSLELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCC 240
           +SL+LFFAIWFVMGN+W+ DSR +SFQRAPKLHLLC FLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLVSSLLGYNINMASTDKGASDDQISELPCWRYKV------SSMQPD-SNKGLPKEDPE 300
           VPL+SSL GYNINM S++KGASDDQIS+LPCWRYK          QPD SN GL KEDPE
Sbjct: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPE 300

Query: 301 CCICLVKYRDEEEVRQLPCSHLFHLKCVDKWLSITSSCPLCKQQLQK 338
           CCICL KY D+EEVRQLPCSH+FHLKCVDKWL+ITSSCPLCKQQLQ+
Sbjct: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQR 347

[Close]
BLAST of Cla003329 vs. NCBI nr
Match: gi|778726317|ref|XP_011659087.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X1 [Cucumis sativus])

HSP 1 Score: 517.3 bits (1331), Expect = 2.0e-143
Identity = 251/347 (72.33%), Postives = 292/347 (84.15%), Query Frame = 1 

Query: 1   MINSGYFVSGPSCNCGGTASFISNSLVEEDGAGAD-VRDDNSVALPASFWVRIAMRVSRA 60
           MI+SG+F+SGPS N   T SFIS S+ EEDGA AD +R++ S ++P SFWV++AM++SRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSEEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLRSDPFNSISWMAMELVAMVFQLAITVFFLAISETEKPVWP 120
           RWFIFLRRVFHYQNGSRSDL  +PFNS SWMAMELVA++FQL I+ F LAIS+ EKPVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISAFTLAISQAEKPVWP 120

Query: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMRGDHVGLS--ETEQRRSSQASRSLRLMNKCR 180
           MRLWI GYDLGC+LSLLLLYGR+ + YLM+ D   LS  E EQ+R++++SR   LMN+CR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQRDGNSLSDIEHEQQRTNESSRYSHLMNRCR 180

Query: 181 SSLELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCC 240
           +SL+LFFAIWFVMGN+W  DSR +SFQRAPKLHLLC FLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLVSSLLGYNINMASTDKGASDDQISELPCWRYKV-------SSMQPDSNKGLPKEDPE 300
           VPL+SSL GYNIN  ST+KGASDDQIS+LPCWRYK         S   +SN GL KEDPE
Sbjct: 241 VPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEANINPRSQLDNSNTGLLKEDPE 300

Query: 301 CCICLVKYRDEEEVRQLPCSHLFHLKCVDKWLSITSSCPLCKQQLQK 338
           CCICL KY D+EEVRQLPCSH+FHL+CVDKWL+ITSSCPLCKQQLQ+
Sbjct: 301 CCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAITSSCPLCKQQLQR 347

[Close]
BLAST of Cla003329 vs. NCBI nr
Match: gi|659126133|ref|XP_008463026.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Cucumis melo])

HSP 1 Score: 488.0 bits (1255), Expect = 1.3e-134
Identity = 233/312 (74.68%), Postives = 270/312 (86.54%), Query Frame = 1 

Query: 35  DVRDDNSVALPASFWVRIAMRVSRARWFIFLRRVFHYQNGSRSDLRSDPFNSISWMAMEL 94
           D+R++ S ++P SFWV++AM++SRARWFIFLRRVFHYQNGSRSDL  +PFNS  WMAMEL
Sbjct: 4   DIRNEASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMEL 63

Query: 95  VAMVFQLAITVFFLAISETEKPVWPMRLWIVGYDLGCILSLLLLYGRYWHLYLMRGDHVG 154
           VA++FQL I+VF LAIS+ EKPVWPMRLWI GYDLGC+LSLLLLYGR+ + YLM+G+   
Sbjct: 64  VALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNR 123

Query: 155 LS--ETEQRRSSQASRSLRLMNKCRSSLELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLL 214
           LS  E EQ+RS+++SR   LMN+CR+SL+LFFAIWFVMGN+W+ DSR +SFQRAPKLHLL
Sbjct: 124 LSDIEHEQQRSNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLL 183

Query: 215 CVFLLVWNAICYSFPFILFLLLCCCVPLVSSLLGYNINMASTDKGASDDQISELPCWRYK 274
           C FLLVWNAICYSFPFILFLLLCCCVPL+SSL GYNINM S++KGASDDQIS+LPCWRYK
Sbjct: 184 CSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINMGSSEKGASDDQISQLPCWRYK 243

Query: 275 V------SSMQPD-SNKGLPKEDPECCICLVKYRDEEEVRQLPCSHLFHLKCVDKWLSIT 334
                     QPD SN GL KEDPECCICL KY D+EEVRQLPCSH+FHLKCVDKWL+IT
Sbjct: 244 AVEANINPRSQPDNSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIT 303

Query: 335 SSCPLCKQQLQK 338
           SSCPLCKQQLQ+
Sbjct: 304 SSCPLCKQQLQR 315

The following BLAST results are available for this feature:
BLAST of Cla003329 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RING4_ARATH4.6e-3131.34E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 ... [more]
RING2_ARATH1.3e-2827.93E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 ... [more]
RIE1_ARATH4.8e-2827.92E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1[more]
RING1_ARATH3.1e-2725.08E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 ... [more]
ATL37_ARATH6.2e-1232.54Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana GN=ATL37 PE=3 SV=1[more]
BLAST of Cla003329 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7S5_CUCSA8.6e-17889.88Uncharacterized protein OS=Cucumis sativus GN=Csa_7G278220 PE=4 SV=1[more]
A0A0A0K4H0_CUCSA1.4e-14372.33Uncharacterized protein OS=Cucumis sativus GN=Csa_7G278230 PE=4 SV=1[more]
A0A0B0PCR8_GOSAR7.9e-13166.67Uncharacterized protein OS=Gossypium arboreum GN=F383_06014 PE=4 SV=1[more]
A0A061F5I6_THECC3.9e-13066.16RING/U-box domain-containing protein isoform 2 OS=Theobroma cacao GN=TCM_030584 ... [more]
A0A0D2R3G4_GOSRA9.7e-12965.75Uncharacterized protein OS=Gossypium raimondii GN=B456_002G102600 PE=4 SV=1[more]
BLAST of Cla003329 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659126137|ref|XP_008463028.1|6.6e-17990.24PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis melo][more]
gi|449463394|ref|XP_004149419.1|1.2e-17789.88PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis sativus][more]
gi|659126131|ref|XP_008463025.1|2.4e-14473.20PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X1 [Cucumis melo][more]
gi|778726317|ref|XP_011659087.1|2.0e-14372.33PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X1 [Cucumis sativu... [more]
gi|659126133|ref|XP_008463026.1|1.3e-13474.68PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU63341watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003329Cla003329.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU63341WMU63341transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 289..332
score: 3.9
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 291..331
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 291..332
score: 12
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 290..332
score: 0.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 287..335
score: 9.2
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 19..337
score: 5.2E
NoneNo IPR availablePANTHERPTHR14155:SF83RING/U-BOX DOMAIN-CONTAINING PROTEINcoord: 19..337
score: 5.2E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 284..335
score: 2.9