Cla003094 (gene) Watermelon (97103) v1

Overview
NameCla003094
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionRetrotransposon protein (AHRD V1 ***- E5GCB5_CUCME)
LocationChr2 : 14262088 .. 14274341 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCAGAGCAGACGAGATGGGACGTCGAAGCCCTCTCTTGCCACTCTAACAGGGGGAATGGTGGCTCTTGCCGCCGTCGAGAGCTTGGTAGGTGGTTCCGTTACGCCGGTTTGGGCTTTGGTAGGGGAGGGCTCCTCTCGAAGGTGAGTATGTGATTTTCTTTTTTTTTTTCCGTCTTCCGGTGTTGCATGTTCATATATTCGTCTGATTTTTGTTTTCTTCGACATTCCACCGACATTGGGTGCAGATCTGTGTGCCATTTATTTTTTCTTCCGAGATCTGTTGTTTTATAATTTTTTCCTTCTCTCATTTTGTTGCATGTTTATGGATCTGTGGTCTAATCTTCTTCCTCATGTTTCGCATATTTATCATATTCATATTCGATTTTGCATGTTCATAGAGTTGTTTTTCTTTTTTTTTTTTCGACATTTGGCCGAGATTGGGTGTAGATCTGTATTCCTTTTTTTTTCGTCGGAGATCTATTGTTTAATTTTCGCCTCTTCTGTTCGTATATATTTCATGTTCGGATGGATCTCTTCTGTAGTCGCATGTTCATAGGCTTGTTTCATTTTTTTCCCTTCTGATTATGTTAGCATGTTTGCAGATCTATGAGTTCCAATTTTTTTTTTTGGTCAGGTTCAGATGGGTTTGCATTCTGTTTCTGTGTTCCTTCCATTTTTTGCATGTCCATATTGGCCGATGATGAGGGTTTTTTCTTTTTTTCATTCAAACTGTTTTAGGCTCATAATTTTCTTTTCTTGATTTCCATTTCGAACTCTACAATTTTCATCTTACTTTTTCAAATAAACACTTGTTTGAAGCATGCTTGATTTTTCTTTCATTTTAACCTACTGATCGGTTCTGTTTTAAAAATTTTTAAACAAAAAAATTGATTGCTTAAATTTTTTTTCACATACCTGAGGCTATTTTTATAAATAAATAAAAATCATTGTAATTGGTTGGTTGGCTATCTGGTTCCATTGTAATCGATTCTGTTGGATCACAATTATTTTTTTTATTACTATGTTATTATGTCGGTTGTTGGTTTATTAATTTGGTGTCACTTCCATTTAAAAATTGTACTGTTCATCACTTTAATTTGGGTGGTTGGGTTGTTTAAACCTCATTAATTCCATGCTTATATATACAACCCATTCTACCCCATTTAAATCACACACTTTTGAAGAATCATTTACCTCTCCAAGTTGTTATTCTCCACTAGTGAGTCCGCTTGATTCCATCTATATTTCTATTTGTTCTTTTGTTTTTTTAAGTGTTCTTCTGATATATTTTTTTTGTTTTCTCAATGTAGGGTGGAAATTGGCATTTAAGTAGCCTACACTGTCCGATCTTCAATACATTACACGTAACTTATTTGTACTATCTTTTTTTTTTTCTTATTTGTACTATCTTTTTTTTGTTTCAACACATGTTACTTGTGGAACTTGTATCTTCTATCTTGTTTGAAATGGTTTTGTATAATTTATTAATATAATTCATTTGGTTCCACTTATGTCTAAAAACAGTTTTTAATGATTAATAATTTCAATTGTATTGTTTAGTTTATGACCTACATTATACACTCTTCTTTTTACTTTATATCAATCACATCTTAGGAATAATATCAAATATGTTTATTGAAGGTGTGAAAATAAAAAATAAGAAAGGAAACAGTCAATAACAACCAAAAAAAAGTTGCAAGTCAAAAACAAAAAAAAAAAAAAAAATTTCAAGATCAAACTCACGAGAGCATACAAGAAAGACTAAAAAGAAAAAAAAATAATAAAGAAATTCAATTGTTTGGAACCAAAATGATTTTTTAGCTTCAAAATATAAGGTATACTTTAGAATTAAAATCCAAATGTATAATCCAAAGTTTTGTAATTTACAAAAATTTATGCACAAACAAGATTTCAACTCATTTTGGTAAGGTTCTTCAATCAATAACGAACTCCCTACTTTGCATCATAGTTTGGTATTTCAACTCAAATACAACACAATTTTATCATTAAAAACTAGTTTCCTACTTTATAATTAAAATCTAATGTTTCTTAATTTACAAAAGTTGGTAGTTAAACAATTTTTCATATCCATTTCTATAATTAAAATCCAACATTTCCTAAATTACTAAAATTGTACTTATACAATCTTTCAAACCCTTTTCTATATTTAAAATCCAACATTGATACTTCACGAAAGTTGATACACAAATTGTTTTTAATTAACTACCATTAAGTCCTACTTTTAGAAAAAGTTTATCAAATGGCTTTGAAAATATAATTTATGATAAATGGTAGTCAAATAACACATTACCCCATCAATGATGGTTCTTTATGATTAAGGGAATGAAAAATCTTTTCACAATTAAACTACATTAAGTTTTCAAATCCAATTTTAAATAACGTGTTCCAAACGAGATTATAAAATTATAAAAGTATATAATAATGGAACAATTAAGAAATTTTTTTTATCACTTGCTTGTTAGAGATCGAAATATGTTTGTTTGTTTACACATTCATTTGTTTATGCATTTGTTTGTTTATATAAATCATTTGTTCATTTGTAATCAATATCTTTTTAAATACAAAATTGGGTGGGATAGAAGAAAGGACTGATTACATAGGAAGGTTGAATAGATAGGACCTTGATACGATAGGAATACTAGAATATGGCCGTTATCTTGTCAGGTACATTGTTAGTTGAGTTAAGCAGTGGATGATATGGACATTCAGCCTGACGAGTTAATCGCTATACTGACTATTGTATGTGCGGCCATCGTTGCGATGGTAAATACTATCACCACTTTGCTACAAGTGGAGGATAATCGGGAGTGACCATCTCCACTTATTAGACATCAAATTCAACAGTTTAATTTCTTTCGTCTGATATACGAAGATGATCAGACGTGTCGTGAGAACACTCGTATGGATAGGAGAACGTTCATGATTCTGTGTCACTTACTTAGGACGACGGGTGGGCTAAGGCCAACAAAATATGTAGACTTCGAGGAAATTGTAACACCCTGTCCCCGAAAACCTAAGTATTCATATAACTAGTAGGGATAAAAGGGATAAAAGTGTGTGGATTGGGGAACCTTTCAACGAAAAGTTAAGATTGTGCAATTACTGATTTATGGCCAATAAATTCTATGCGTTGAGATGAATGGTATTAAGAAAAGAATAGACATATCTTGGAAGATTAGATTGATGCGTAAATGGTTAAGCTCAAACGCATGGTATTTAATACTGAGGAGTTATCAACCAAGCAGTGAGATTAGGTTCTAATGAGGGCAAGTTGAATGGGGTAAAGTATCATGCGCTGATAATGTAAAGTGAAATAGAACCATCACATAAGAAAAGTGCCTTGCGCTGGAATGGTTGACAACGCGTTGGGAAGTGAAACTAAGGAAAGTAATGCGTAAAGTAATATACAGAGAAATAGTGAATGGAGTTGATGGAACAAGAATTGAGTATGGAATATGGCCATACGTTGGTAAGCCTAGTATGGGAAGCTAGTGTAAAGGGAAGGAAGTAGACTGTTACCATAGCTTTGATGGACAAGTCGTTATTTTGATTGGTATGTCAGGTATTGAAGAGTGTTATTATGTGTTTGGAGGCAAAGATGGAGCTTGACCAAGGGTTGTATTCGACCTACGTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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GTAAAAAATCGAGTGATGTGACACCAATTTGCACGGTCTGGCGAGACAATGTCCAGACACTTCAATATTGTGCTGAACGCAATATTGAGACTGTACGAAGTTCTATTGCGAAGACTAGAGCCAGTCGCTGAAAATTGTACAGATGACAGATGGCGCTAGTTTCAGGTACAAGCATCCTGTTGTTTTAATGGTATTGTTTGGGGGTTTTGAAATTACCTTGAACTTATCATTGAAACAATGATTCGTCACAGAATTGCTTAGGTGCACTTGACGGAACCCACATAAAGGTAAATGTCAGTGCAACTGATCAACCACGCTATAGGACTAGAAAGGGCGAGATCGAAACGAACGTCCTTGCTATATGCAATCAAAGCTGTGAGTTCATATTCGTTTTAGCTGGATAGGAAGAATCAATTGCTGACTCGAGGGTTTTACGAGATGCAGTGTCCAGGCCAACTGGATTGAAAGTCCCTAGGGGTTAGTTTATAAATATCTATATACCCTTCCATACGGATGAACGATCATCAAGTGATAACTTGGCTCAATTTCGCAGGATACTACTATTTGTGCGATGCTGGTTATCCAAACGCCGAGGGTTTTTTGGCTCCATATCGAGGACAAAGATACCATTTGACCGAGTGGCGAGGAGGGAACCCGCCAACAAGCCCTAGGGATATTTTCAATATGAGACATTCGTCTGCCCGGAACGTCATTGAGAGAGCGTTCGGGATGTTGAAAGGTCGATGGGCAATCCTTCATGGAAAATCATACTACCCTATTGATGTGCAGTGCAAGACCATACATGCATGTTGTCTACTGCACAATCTAATAATTCGGGAAATGGGCCAAAACTCATTACTTGACGAAGGAGAGGGAAGTCAGGAGGGACCAATTCCAACAGACAATGAGAATATTGATTTTGTGGAGACCTCCAATGCATTTACTACATGGAGAGATGATCTCGCGAATCAAATGTGGGTTGAATGGAATGCAAATTAACGACGCCAATGGGCCCAACTTTTGTATAGTCTTTTTTGTTATGTATACAGTATTTGGTTCACTCCCGACGTGTACGTTTTGTATATTTTTTTGTATAACACATGTTTATATTTCAATTTATAGTTTGAATGAAGTGATTCTTGTTGTATACAGTCTCAATGGGTTAATGCTTGCTCACCACACTACACCTTCATGTTCTAGCTTGATTGTCTTAAAATTATTTAATTTATATGGAAGCATTCGGATCACGCGCAAGAGCCACAAAACATATTTGGACAGATGAGGAGGACCGAATCCTCGTGGAGTGTTTGGTCCAATGTGTTCAGTTCGGGCACTAGCGAGCTAATAACGGGAGTTTCCGACCTGGATTCCTAGCGAACATACTGCGGATGATGCAACAGAGAATTTTGGGGTGTTCCATACAGGTAAGCCCACATTTGGAGTCAAGGGTTAGGACGTTGAAGAGACAGTACAGCGCAATTGCTGAAATGTTGGGCATAAGATGTAGTGGGTTTGGTTGGAATGCGAAGCACAAATGTATTGATTGTGAGGCGGAGATATTTGACGAGTGGGTCAAGGTAATTTTCTTATTTATTTTATTTATGTCTTTTTGTTTTAAATATGTCTTAGCCATAACACATTTCATCTTTAACAGAGTCATCCGAGTGCAAAAGGACTGCGACATAAGTCATTTCCGTTCTATGACGACTTAGTCATTGTATTCGGCAAAGATAGAGCCACAGGAAGTCGTGCAACCACCACTGCAGAGGTCAGATCTGAACCTGTTGTGGACGAGGAGAACAAGGACATCTTGAATAACCAGTCCCCGGACTTTGAGAACTTCTATATTCCTGATCCACCTTTTGTCAACTCTCCCACATCAAAGGACACTCCAACTACCCCCGATGGTAGAGGATCTGCAAGTAGCATGCCATCAAGAAGCAGGAGGTCCCGAAGTTCCTCGATTGGAGAGTACAGTGACGTGGTTCAGGATGGATTCCAACTTCTGATGAAGTCCATTGACGGCATTGCACAGTGGCTTGTCGTGAACGAAGACCTGGCAAGGCATTGTTGCCGAGAACTGTACGCCGAGCTGCAATCAATTCCTAGTCTGTCGGTGCAAGATGGCTTCACTGTTGCATGCTCATTGCTTGCAGATCCGATGCTGTTAAGCCACTTCGTGGACTTCCCACCACAGTGGAAGTACAACTATTGCATGCAAGTTCTCGAGCGACAACAGGATCCAACCCTATGA

mRNA sequence

ATGCTTCAGAGCAGACGAGATGGGACGTCGAAGCCCTCTCTTGCCACTCTAACAGGGGGAATGGTGGCTCTTGCCGCCGTCGAGAGCTTGGTAGGTGGTTCCGTTACGCCGGTTTGGGCTTTGGTAGGGGAGGGCTCCTCTCGAAGTGATGTGAGTCATCCGAGTGCAAAAGGACTGCGACATAAGTCATTTCCGTTCTATGACGACTTAGTCATTGTATTCGGCAAAGATAGAGCCACAGGAAGTCGTGCAACCACCACTGCAGAGGTCAGATCTGAACCTGTTGTGGACGAGGAGAACAAGGACATCTTGAATAACCAGTCCCCGGACTTTGAGAACTTCTATATTCCTGATCCACCTTTTGTCAACTCTCCCACATCAAAGGACACTCCAACTACCCCCGATGGTAGAGGATCTGCAAGTAGCATGCCATCAAGAAGCAGGAGGTCCCGAAGTTCCTCGATTGGAGAGTACAGTGACGTGGTTCAGGATGGATTCCAACTTCTGATGAAGTCCATTGACGGCATTGCACAGTGGCTTGTCGTGAACGAAGACCTGGCAAGGCATTGTTGCCGAGAACTGTACGCCGAGCTGCAATCAATTCCTAGTCTGTCGGTGCAAGATGGCTTCACTGTTGCATGCTCATTGCTTGCAGATCCGATGCTGTTAAGCCACTTCGTGGACTTCCCACCACAGTGGAAGTACAACTATTGCATGCAAGTTCTCGAGCGACAACAGGATCCAACCCTATGA

Coding sequence (CDS)

ATGCTTCAGAGCAGACGAGATGGGACGTCGAAGCCCTCTCTTGCCACTCTAACAGGGGGAATGGTGGCTCTTGCCGCCGTCGAGAGCTTGGTAGGTGGTTCCGTTACGCCGGTTTGGGCTTTGGTAGGGGAGGGCTCCTCTCGAAGTGATGTGAGTCATCCGAGTGCAAAAGGACTGCGACATAAGTCATTTCCGTTCTATGACGACTTAGTCATTGTATTCGGCAAAGATAGAGCCACAGGAAGTCGTGCAACCACCACTGCAGAGGTCAGATCTGAACCTGTTGTGGACGAGGAGAACAAGGACATCTTGAATAACCAGTCCCCGGACTTTGAGAACTTCTATATTCCTGATCCACCTTTTGTCAACTCTCCCACATCAAAGGACACTCCAACTACCCCCGATGGTAGAGGATCTGCAAGTAGCATGCCATCAAGAAGCAGGAGGTCCCGAAGTTCCTCGATTGGAGAGTACAGTGACGTGGTTCAGGATGGATTCCAACTTCTGATGAAGTCCATTGACGGCATTGCACAGTGGCTTGTCGTGAACGAAGACCTGGCAAGGCATTGTTGCCGAGAACTGTACGCCGAGCTGCAATCAATTCCTAGTCTGTCGGTGCAAGATGGCTTCACTGTTGCATGCTCATTGCTTGCAGATCCGATGCTGTTAAGCCACTTCGTGGACTTCCCACCACAGTGGAAGTACAACTATTGCATGCAAGTTCTCGAGCGACAACAGGATCCAACCCTATGA

Protein sequence

MLQSRRDGTSKPSLATLTGGMVALAAVESLVGGSVTPVWALVGEGSSRSDVSHPSAKGLRHKSFPFYDDLVIVFGKDRATGSRATTTAEVRSEPVVDEENKDILNNQSPDFENFYIPDPPFVNSPTSKDTPTTPDGRGSASSMPSRSRRSRSSSIGEYSDVVQDGFQLLMKSIDGIAQWLVVNEDLARHCCRELYAELQSIPSLSVQDGFTVACSLLADPMLLSHFVDFPPQWKYNYCMQVLERQQDPTL
Homology
[Close]
BLAST of Cla003094 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.3e-16
Identity = 63/208 (30.29%), Postives = 98/208 (47.12%), Query Frame = 1 

Query: 41  LVGEGSSRSDVSHPSAKGLRHKSFPFYDDLVIVFGKDRATGSRATTTAEVRSE--PVVDE 100
           +V E     D SHP+AKGL +KSF  YD+L  VFGKDRATG RA + A++ S   P  D 
Sbjct: 455 IVAEKEVFDDWSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDA 514

Query: 101 ENKDILNNQSPDFENFYIPDPPFVNSPTSKDTPTTPDGRGSASSMPSRSRRSRSSSIGEY 160
              D +     DF   Y P    +N        T         ++ S S+R R     + 
Sbjct: 515 GAADAM--PDTDFPPMYSPG---LNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDS 574

Query: 161 SDVVQDGFQLLMKSIDGIAQWLVVNEDLARHCCRELYAELQSIPSLSVQDGFTVACSLLA 220
            D+V+   +   + +  IA+W ++    A    +E+   L++IP L++ D   +   L+ 
Sbjct: 575 GDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMR 634

Query: 221 DPMLLSHFVDFPPQWKYNYCMQVLERQQ 247
           +   +  F++ P   KY YC  +L+  Q
Sbjct: 635 NVDDMKAFLEVPDHMKYPYCSLILQENQ 657

[Close]
BLAST of Cla003094 vs. TrEMBL
Match: A0A0A0M0S6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665930 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.5e-12
Identity = 58/180 (32.22%), Postives = 92/180 (51.11%), Query Frame = 1 

Query: 53  HPSAKGLRHKSFPFYDDLVIVFGKDRATGSRATTTAEVRSEPVVDEENKDILNNQSPDFE 112
           H +A+GL +KSF ++ DL IV G+DR  G R  T  E+  +   D E  DI  N     E
Sbjct: 90  HHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGIN----LE 149

Query: 113 NFYIPDPPFVNSPTSKDTPTTPDGR--GSASSMPSRSRRSRSSSIGEYSDVVQDGFQLLM 172
           +F IP P  +  P+ K+  +TP      + S   SR RRS S +   +   +++ F+ + 
Sbjct: 150 DFDIPKPHGLELPSVKNMSSTPTSMILDARSYRQSRKRRSYSCT---FCASMRETFKEIG 209

Query: 173 KSIDGIAQWLVVNEDLARHCCRELYAELQSIPSLSVQDGFTVACSLLADPMLLSHFVDFP 231
           K +    + + +   L     ++LY ELQ+I  + V +   V  SLL +P +L  F+D+P
Sbjct: 210 KIVAMEERKMKIESSLH----KQLYVELQTIHGMDVDNCLIVVESLLPNPTMLHTFLDYP 258

[Close]
BLAST of Cla003094 vs. TrEMBL
Match: A0A0J8BIR4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018220 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 7.4e-09
Identity = 62/207 (29.95%), Postives = 92/207 (44.44%), Query Frame = 1 

Query: 52  SHPSAKGLRHKSFPFYDDLVIVFGKDRATGSRATTTAEVRSE----PVVDEENKDILNNQ 111
           SH +A GLR+K FPFY++L  ++GKDRA G+ + T  +V  E      V+EE      +Q
Sbjct: 121 SHKNAAGLRNKPFPFYEELGKIWGKDRAVGNESGTVYDVLQEMEHGARVEEE------HQ 180

Query: 112 SPDFENFYIPDPPFVNSPTSKDTPTTPDGRGSASSMPSRSRRSR------------SSSI 171
            PD       +    NSPT  D PT P      S+ PS SR  R            S+ I
Sbjct: 181 VPDL------NAEESNSPTQCD-PTGPPSSTPQSTTPSSSRTKRARTETIEALKEFSTKI 240

Query: 172 GEYSDVVQDGFQLLMKSIDGIAQWLVVNEDLARHCCRELYAELQSIPSLSVQDGFTVACS 231
           G+ SDV+    +   + I  +A       D A    + L  E+  +  LS  +    +  
Sbjct: 241 GKISDVM----EAATEHIGRLANCFQHESDSADRRMK-LTTEIMKMEGLSPSEVLLASKK 300

Query: 232 LLADPMLLSHFVDFPPQWKYNYCMQVL 243
           +  +P+ +  F   P  +KY Y   +L
Sbjct: 301 IALNPLEVDFFFSLPENFKYAYVQGLL 309

[Close]
BLAST of Cla003094 vs. TrEMBL
Match: A0A161WV79_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_011368 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.7e-08
Identity = 55/198 (27.78%), Postives = 89/198 (44.95%), Query Frame = 1 

Query: 52  SHPSAKGLRHKSFPFYDDLVIVFGKDRATGSRATTTAEVRSEPVVDEENKDILNNQSPDF 111
           SHP+AKGLR+KSFP+YD+L  VFGKDRA G    + A+   E   +EEN    +      
Sbjct: 54  SHPNAKGLRNKSFPYYDELSQVFGKDRANGECVESPADAAEEIANEEENTPQQSEHRK-- 113

Query: 112 ENFYIPDPPFVNSPTSKDTPTTPDGRGSASSMPSRSRRSRSSSIGEYSDVVQDGFQLLMK 171
           EN      P ++   S DT +  + R  A S+     +  +  + + S+V++ G + + K
Sbjct: 114 ENTEDEVSPRID-VQSADTNSRANKRLKADSL--EIVKELTFGLQKISNVMETGNENIAK 173

Query: 172 -------SIDGIAQWLVVNEDLARHCCRELYAELQSIPSLSVQDGFTVACSLLADPMLLS 231
                    DG  +  +VN            +EL  +  L+ ++       +  DP+   
Sbjct: 174 LTSCFQHESDGAKKRGLVN------------SELMKVAGLTAEEIIKAGRKIALDPLETD 233

Query: 232 HFVDFPPQWKYNYCMQVL 243
           HF   P  ++  Y   +L
Sbjct: 234 HFFSLPEDFRSTYVQALL 234

[Close]
BLAST of Cla003094 vs. TrEMBL
Match: A0A162AHN3_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_009785 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.8e-08
Identity = 56/202 (27.72%), Postives = 83/202 (41.09%), Query Frame = 1 

Query: 52  SHPSAKGLRHKSFPFYDDLVIVFGKDRATGSRATTTAEVRSEPVVDEENK--DILNNQSP 111
           SHP+AKGLR+KSFPFYD+L  VFGKDRA G    + A+   E   DEE+        Q  
Sbjct: 125 SHPNAKGLRNKSFPFYDELAQVFGKDRANGEGVESPADAVEEIANDEESNLYQQAGQQKD 184

Query: 112 DFENFYIPDPPFVNSPTSKDTPTTPDGRGSASSMPSRSRRSRSSSIG--EYSDVVQDGFQ 171
           + E+   P             PT    RGS           +  + G  + S+V++  ++
Sbjct: 185 NLEDEVSP---------RNVQPTDTGARGSKRIKTDSLEIVKELTFGLQKISNVMETEYE 244

Query: 172 LLMK-------SIDGIAQWLVVNEDLARHCCRELYAELQSIPSLSVQDGFTVACSLLADP 231
            + K         DG  + ++VN            +EL  I  LS          +  DP
Sbjct: 245 NIAKLTSCFQHESDGANKRMMVN------------SELLKIEGLSPDQFIKAGRKIALDP 304

Query: 232 MLLSHFVDFPPQWKYNYCMQVL 243
           +   +F   P  ++  Y   +L
Sbjct: 305 LETDYFFSLPEDYRSTYVQALL 305

[Close]
BLAST of Cla003094 vs. NCBI nr
Match: gi|659071532|ref|XP_008460440.1| (PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo])

HSP 1 Score: 114.4 bits (285), Expect = 2.9e-22
Identity = 72/184 (39.13%), Postives = 101/184 (54.89%), Query Frame = 1 

Query: 53  HPSAKGLRHKSFPFYDDLVIVFGKDRATGSRATTTAEVRSEPVVDEENKDILNNQSPDFE 112
           HP+A+GL +KSFP++ DL I+FG+DRATG R  T  E+  +   D E  D+  N     E
Sbjct: 31  HPNARGLLNKSFPYFYDLKIMFGRDRATGGRCKTPIEMGLQIARDTEEDDMDIN----LE 90

Query: 113 NFYIPDPPFVNSPTSKDTPTTPDGRGS--ASSMPSRSRRSRSSSIGEYSDVVQDGFQLLM 172
           +F IP+P  +  P+ +D  +TP        SS PS+ RRS       YS+ + D F+  M
Sbjct: 91  DFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSKPSKKRRS-------YSEDLMDTFRASM 150

Query: 173 ----KSIDGIAQWLVVNEDLARHCCRELYAELQSIPSLSVQDGFTVACSLLADPMLLSHF 231
               K I  IA W     ++     + LYAELQ+IP + V D   V  SLL DP++L  F
Sbjct: 151 RETSKEIRKIAAWQREKMEIESSIHKRLYAELQTIPGMDVDDCLIVVESLLPDPIMLHTF 203

[Close]
BLAST of Cla003094 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 92.8 bits (229), Expect = 9.0e-16
Identity = 63/208 (30.29%), Postives = 98/208 (47.12%), Query Frame = 1 

Query: 41  LVGEGSSRSDVSHPSAKGLRHKSFPFYDDLVIVFGKDRATGSRATTTAEVRSE--PVVDE 100
           +V E     D SHP+AKGL +KSF  YD+L  VFGKDRATG RA + A++ S   P  D 
Sbjct: 455 IVAEKEVFDDWSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDA 514

Query: 101 ENKDILNNQSPDFENFYIPDPPFVNSPTSKDTPTTPDGRGSASSMPSRSRRSRSSSIGEY 160
              D +     DF   Y P    +N        T         ++ S S+R R     + 
Sbjct: 515 GAADAM--PDTDFPPMYSPG---LNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDS 574

Query: 161 SDVVQDGFQLLMKSIDGIAQWLVVNEDLARHCCRELYAELQSIPSLSVQDGFTVACSLLA 220
            D+V+   +   + +  IA+W ++    A    +E+   L++IP L++ D   +   L+ 
Sbjct: 575 GDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMR 634

Query: 221 DPMLLSHFVDFPPQWKYNYCMQVLERQQ 247
           +   +  F++ P   KY YC  +L+  Q
Sbjct: 635 NVDDMKAFLEVPDHMKYPYCSLILQENQ 657

[Close]
BLAST of Cla003094 vs. NCBI nr
Match: gi|659082641|ref|XP_008441954.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 84.0 bits (206), Expect = 4.2e-13
Identity = 63/197 (31.98%), Postives = 91/197 (46.19%), Query Frame = 1 

Query: 52  SHPSAKGLRHKSFPFYDDLVIVFGKDRATGSRATTTAEVRSEPVVDEENKDILNNQSPDF 111
           SHP+AKGL HKSFP+YDDL  VFGKDRATG+R+ T   V S       N   + N +   
Sbjct: 114 SHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGS-------NVSNMFNDTIPL 173

Query: 112 ENFYIPDPPFVNSPTSKDTPTTPDG--RGSAS---SMPSRSRRSRSSSIGEYSDVVQDGF 171
            + +  D P + S     +P    G   G AS   +  S S+R R S   E  +V++   
Sbjct: 174 GDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVM 233

Query: 172 QLLMKSIDGIAQWLVVNEDLARHCCRELYAELQSIPSLSVQDGFTVACSLLADPMLLSHF 231
           +   + +  IA W      +      ++  +LQ IP L  QD   +   L      +  F
Sbjct: 234 EFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGF 293

Query: 232 VDFPPQWKYNYCMQVLE 244
           +  P + K  YC  +L+
Sbjct: 294 LSIPTELKLEYCNILLQ 303

[Close]
BLAST of Cla003094 vs. NCBI nr
Match: gi|659123900|ref|XP_008461893.1| (PREDICTED: uncharacterized protein LOC103500387 [Cucumis melo])

HSP 1 Score: 81.3 bits (199), Expect = 2.7e-12
Identity = 58/206 (28.16%), Postives = 96/206 (46.60%), Query Frame = 1 

Query: 41  LVGEGSSRSDVSHPSAKGLRHKSFPFYDDLVIVFGKDRATGSRATTTAEVRSEPVVDEEN 100
           +V E     D SHP+AKGL +KSFP YD+L  VF KD ATG RA + A+V S      + 
Sbjct: 49  IVAEKEVFDDWSHPAAKGLLNKSFPHYDELSYVFSKDHATGGRAESFADVGSNDPTGYDA 108

Query: 101 KDILNNQSPDFENFYIPDPPFVNSPTSKDTPTTPDGRGSASSMPSRSRRSRSSSIGEYSD 160
                    DF+  Y      +N    +   T          + S S++ R  S  +  D
Sbjct: 109 FAANAASDTDFQPMYSRG---LNMSPDELMGTRTARVSEGRYVSSGSKQKRGGSTIDSGD 168

Query: 161 VVQDGFQLLMKSIDGIAQWLVVNEDLARHCCRELYAELQSIPSLSVQDGFTVACSLLADP 220
           +++   +   + ++ IA+W V+    A    +E+  +L++IP L++ D   +   L+ + 
Sbjct: 169 ILRTAIEYGNEQLNRIAEWHVLQRQDATQTRQEVVRQLEAIPELTLMDRCRLMRILIHNV 228

Query: 221 MLLSHFVDFPPQWKYNYCMQVLERQQ 247
             +  F++ P   K  YC  +LE  +
Sbjct: 229 NDMKAFLEVPDNMK-PYCSIILEENR 250

[Close]
BLAST of Cla003094 vs. NCBI nr
Match: gi|700211636|gb|KGN66732.1| (hypothetical protein Csa_1G665930 [Cucumis sativus])

HSP 1 Score: 79.7 bits (195), Expect = 7.9e-12
Identity = 58/180 (32.22%), Postives = 92/180 (51.11%), Query Frame = 1 

Query: 53  HPSAKGLRHKSFPFYDDLVIVFGKDRATGSRATTTAEVRSEPVVDEENKDILNNQSPDFE 112
           H +A+GL +KSF ++ DL IV G+DR  G R  T  E+  +   D E  DI  N     E
Sbjct: 90  HHNARGLLNKSFSYFYDLQIVIGRDRTIGDRCKTPVEMDPQTTKDIEKDDIGIN----LE 149

Query: 113 NFYIPDPPFVNSPTSKDTPTTPDGR--GSASSMPSRSRRSRSSSIGEYSDVVQDGFQLLM 172
           +F IP P  +  P+ K+  +TP      + S   SR RRS S +   +   +++ F+ + 
Sbjct: 150 DFDIPKPHGLELPSVKNMSSTPTSMILDARSYRQSRKRRSYSCT---FCASMRETFKEIG 209

Query: 173 KSIDGIAQWLVVNEDLARHCCRELYAELQSIPSLSVQDGFTVACSLLADPMLLSHFVDFP 231
           K +    + + +   L     ++LY ELQ+I  + V +   V  SLL +P +L  F+D+P
Sbjct: 210 KIVAMEERKMKIESSLH----KQLYVELQTIHGMDVDNCLIVVESLLPNPTMLHTFLDYP 258

The following BLAST results are available for this feature:
BLAST of Cla003094 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCB5_CUCME6.3e-1630.29Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0M0S6_CUCSA5.5e-1232.22Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665930 PE=4 SV=1[more]
A0A0J8BIR4_BETVU7.4e-0929.95Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018220 PE=4 S... [more]
A0A161WV79_DAUCA3.7e-0827.78Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_011368 PE=4 SV=1[more]
A0A162AHN3_DAUCA4.8e-0827.72Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_009785 PE=4 SV=1[more]
BLAST of Cla003094 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659071532|ref|XP_008460440.1|2.9e-2239.13PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo][more]
gi|307136287|gb|ADN34114.1|9.0e-1630.29retrotransposon protein [Cucumis melo subsp. melo][more]
gi|659082641|ref|XP_008441954.1|4.2e-1331.98PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo][more]
gi|659123900|ref|XP_008461893.1|2.7e-1228.16PREDICTED: uncharacterized protein LOC103500387 [Cucumis melo][more]
gi|700211636|gb|KGN66732.1|7.9e-1232.22hypothetical protein Csa_1G665930 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003094Cla003094.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31704FAMILY NOT NAMEDcoord: 52..244
score: 3.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla003094Bottle gourd (USVL1VR-Ls)lsiwmB381
Cla003094Watermelon (97103) v2wmwmbB311
Cla003094Watermelon (97103) v1wmwmB005
Cla003094Watermelon (Charleston Gray)wcgwmB075
Cla003094Watermelon (Charleston Gray)wcgwmB202