Cla003057 (gene) Watermelon (97103) v1

NameCla003057
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr4 : 14392840 .. 14393234 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGATAGGCTGGACACTCAGTATGAGAAACTCCATTCCCAACTTGAGGCCAATGTGGGTAACGCGAGTGCCATTTCTATTGTGAGCTGCATGAAGAGCTCCTTGATGCTTGTTCCTGAACCAGTGATTGAGCCTATTGTGGATTATGAGGAAAAGATGGCGTGCTTGCCAAAGAGATGTGGGGTAAGTTTTGATCCATCTTTGAAATTAAATTCTTACATCATGTTTCTCCTTTCCCTAGTAGGTTAGTTGTTGCTAAAGGAAGTGTGGACAAGGAAGAGGTGAGTTCTACACATACTTCTAATGATGCAAGCCCTACTAGAAAGGGCAAGAAGGTCTGGGTTGAGGTTCTTGAGAAAGAAAAAAAGAAGAATGAACAGCACAGAAGGTAG

mRNA sequence

ATGGTCGATAGGCTGGACACTCAGTATGAGAAACTCCATTCCCAACTTGAGGCCAATGTGGGTAACGCGAGTGCCATTTCTATTGTGAGCTGCATGAAGAGCTCCTTGATGCTTGTTCCTGAACCAGTGATTGAGCCTATTGTGGATTATGAGGAAAAGATGGCGTGCTTGCCAAAGAGATGTGGGGAAGAGGTGAGTTCTACACATACTTCTAATGATGCAAGCCCTACTAGAAAGGGCAAGAAGGTCTGGGTTGAGGTTCTTGAGAAAGAAAAAAAGAAGAATGAACAGCACAGAAGGTAG

Coding sequence (CDS)

ATGGTCGATAGGCTGGACACTCAGTATGAGAAACTCCATTCCCAACTTGAGGCCAATGTGGGTAACGCGAGTGCCATTTCTATTGTGAGCTGCATGAAGAGCTCCTTGATGCTTGTTCCTGAACCAGTGATTGAGCCTATTGTGGATTATGAGGAAAAGATGGCGTGCTTGCCAAAGAGATGTGGGGAAGAGGTGAGTTCTACACATACTTCTAATGATGCAAGCCCTACTAGAAAGGGCAAGAAGGTCTGGGTTGAGGTTCTTGAGAAAGAAAAAAAGAAGAATGAACAGCACAGAAGGTAG

Protein sequence

MVDRLDTQYEKLHSQLEANVGNASAISIVSCMKSSLMLVPEPVIEPIVDYEEKMACLPKRCGEEVSSTHTSNDASPTRKGKKVWVEVLEKEKKKNEQHRR
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU79294watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003057Cla003057.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU79294WMU79294transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..31
score:

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla003057Watermelon (Charleston Gray)wcgwmB255
Cla003057Cucumber (Gy14) v2cgybwmB313
Cla003057Cucumber (Chinese Long) v3cucwmB354