Cla003054 (gene) Watermelon (97103) v1

NameCla003054
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPeroxidase (AHRD V1 ***- B9SCV9_RICCO); contains Interpro domain(s) IPR010255 Haem peroxidase
LocationChr1 : 15696844 .. 15697080 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCTTTCGTCGTTGACAAGTCGTTTCATAGGCAGATATCGCAACAAAGAGGAATATTGGAAATTGATCAACAGCTTGCTTTGGATCCATTGACAAAGGACTTCGTATGGAATGTGGCGTTCCGATCCGACTTCGCCTTCAAGTTTGGACAAGCATTGATCAAGATGGGAAGAATTCAAGTTCTTACTGGCTCAGAAGGGGAGATTAGAAGAACATGTGGGGCTGTTAATTGA

mRNA sequence

ATGAGTTCTTTCGTCGTTGACAAGTCGTTTCATAGGCAGATATCGCAACAAAGAGGAATATTGGAAATTGATCAACAGCTTGCTTTGGATCCATTGACAAAGGACTTCGTATGGAATGTGGCGTTCCGATCCGACTTCGCCTTCAAGTTTGGACAAGCATTGATCAAGATGGGAAGAATTCAAGTTCTTACTGGCTCAGAAGGGGAGATTAGAAGAACATGTGGGGCTGTTAATTGA

Coding sequence (CDS)

ATGAGTTCTTTCGTCGTTGACAAGTCGTTTCATAGGCAGATATCGCAACAAAGAGGAATATTGGAAATTGATCAACAGCTTGCTTTGGATCCATTGACAAAGGACTTCGTATGGAATGTGGCGTTCCGATCCGACTTCGCCTTCAAGTTTGGACAAGCATTGATCAAGATGGGAAGAATTCAAGTTCTTACTGGCTCAGAAGGGGAGATTAGAAGAACATGTGGGGCTGTTAATTGA

Protein sequence

MSSFVVDKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSDFAFKFGQALIKMGRIQVLTGSEGEIRRTCGAVN
BLAST of Cla003054 vs. Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-11
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 1

Query: 2   SSFVVDKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSDFAFKFGQALIKMGRIQ 61
           SS  +D SF+++I   RG+L IDQ+LA+D LT   V ++A  +DF  +FGQA++ +G ++
Sbjct: 248 SSNTMDVSFYKEIKVSRGVLHIDQKLAIDDLTSKMVTDIANGNDFLVRFGQAMVNLGSVR 307

Query: 62  VLT-GSEGEIRRTC 75
           V++   +GEIRR+C
Sbjct: 308 VISKPKDGEIRRSC 321

BLAST of Cla003054 vs. Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-11
Identity = 38/78 (48.72%), Postives = 46/78 (58.97%), Query Frame = 1

Query: 2   SSFVVDKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSD-FAFKFGQALIKMGRI 61
           +SF VD + + +I +QRGIL IDQ L LD  T   V   A  +  F  +F +AL+KMG I
Sbjct: 232 TSFTVDNAIYGEIRRQRGILRIDQNLGLDRSTSGIVSGYASSNTLFRKRFAEALVKMGTI 291

Query: 62  QVLTGSEGEIRRTCGAVN 79
           +VLTG  GEIRR C   N
Sbjct: 292 KVLTGRSGEIRRNCRVFN 309

BLAST of Cla003054 vs. Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.0e-10
Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 1

Query: 7   DKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSDFAFK--FGQALIKMGRIQVLT 66
           D  F +QI ++RG+L++DQ+LA DP T+  V   A  + F FK  F +A++KMG + VLT
Sbjct: 241 DNQFFKQIRKRRGVLQVDQRLASDPQTRGIVARYANNNAF-FKRQFVRAMVKMGAVDVLT 300

Query: 67  GSEGEIRRTCGAVN 79
           G  GEIRR C   N
Sbjct: 301 GRNGEIRRNCRRFN 313

BLAST of Cla003054 vs. Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 8.8e-10
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 1

Query: 7   DKSFHRQISQQRGILEIDQQLALDPLTKDFVWNV-AFRSDFAFKFGQALIKMGRIQVLTG 66
           D S++  +S+ RG+L+ DQ L  DP T+  V  + A RS F  +F +++++M  I V+TG
Sbjct: 256 DTSYYNNLSRGRGVLQSDQVLWTDPATRPIVQQLMAPRSTFNVEFARSMVRMSNIGVVTG 315

Query: 67  SEGEIRRTCGAVN 79
           + GEIRR C AVN
Sbjct: 316 ANGEIRRVCSAVN 328

BLAST of Cla003054 vs. Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.3e-09
Identity = 35/76 (46.05%), Postives = 41/76 (53.95%), Query Frame = 1

Query: 4   FVVDKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSD-FAFKFGQALIKMGRIQV 63
           F VD   +RQ+ QQR IL ID  L  D  T+  V + A+ +  F   F +A+ KMG I V
Sbjct: 234 FRVDNEIYRQMIQQRAILRIDDNLIRDGSTRSIVSDFAYNNKLFKESFAEAMQKMGEIGV 293

Query: 64  LTGSEGEIRRTCGAVN 79
           LTG  GEIR  C A N
Sbjct: 294 LTGDSGEIRTNCRAFN 309

BLAST of Cla003054 vs. TrEMBL
Match: A0A0A0LYA7_CUCSA (Peroxidase OS=Cucumis sativus GN=Csa_1G166260 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.2e-28
Identity = 66/78 (84.62%), Postives = 69/78 (88.46%), Query Frame = 1

Query: 1   MSSFVVDKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSDFAFKFGQALIKMGRI 60
           MSSF VD SFHRQIS++RGILEIDQQLALDPLTKD V NVAFRSDF FKFGQA+IKMGR 
Sbjct: 249 MSSFAVDNSFHRQISRRRGILEIDQQLALDPLTKDLVLNVAFRSDFGFKFGQAMIKMGRF 308

Query: 61  QVLTGSEGEIRRTCGAVN 79
           QVLTGS GEIR TC AVN
Sbjct: 309 QVLTGSAGEIRSTCAAVN 326

BLAST of Cla003054 vs. TrEMBL
Match: A0A022QDF1_ERYGU (Peroxidase OS=Erythranthe guttata GN=MIMGU_mgv1a024318mg PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 8.0e-18
Identity = 47/78 (60.26%), Postives = 61/78 (78.21%), Query Frame = 1

Query: 1   MSSFVVDKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSDFAFKFGQALIKMGRI 60
           +SS  VD S++RQI  +RGIL+IDQ LALDP+TK  V  +A   DF+ KFGQA++K+G I
Sbjct: 254 LSSLTVDNSYYRQIVSKRGILQIDQDLALDPITKPTVSAIANGFDFSTKFGQAMVKLGSI 313

Query: 61  QVLTGSEGEIRRTCGAVN 79
           QVLTG +GEIRR+C A+N
Sbjct: 314 QVLTGKQGEIRRSCRAIN 331

BLAST of Cla003054 vs. TrEMBL
Match: A0A061GV76_THECC (Peroxidase OS=Theobroma cacao GN=TCM_041378 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.3e-17
Identity = 44/78 (56.41%), Postives = 61/78 (78.21%), Query Frame = 1

Query: 1   MSSFVVDKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSDFAFKFGQALIKMGRI 60
           +SS  +D SF++QI  +RGIL+IDQ+LALDPLT   V ++A  +DF  KFGQA++K+G +
Sbjct: 249 LSSLTMDNSFYKQIILKRGILQIDQELALDPLTNGTVASIATSNDFPAKFGQAMVKLGAV 308

Query: 61  QVLTGSEGEIRRTCGAVN 79
            VLTGS+GEIR++CG  N
Sbjct: 309 DVLTGSQGEIRKSCGVTN 326

BLAST of Cla003054 vs. TrEMBL
Match: A0A124SBH4_CYNCS (Peroxidase OS=Cynara cardunculus var. scolymus GN=Ccrd_007322 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 4.4e-16
Identity = 46/78 (58.97%), Postives = 60/78 (76.92%), Query Frame = 1

Query: 1   MSSFVVDKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSDFAFKFGQALIKMGRI 60
           +SS +VDKSF+ QI  +RG+L+ D QLA D L+K  V  +A  SDFA KFGQA++KMG I
Sbjct: 473 LSSQIVDKSFYSQIIMRRGVLQFDHQLASDRLSKTKVAAIARSSDFATKFGQAMVKMGVI 532

Query: 61  QVLTGSEGEIRRTCGAVN 79
           Q LTG++GEIR++C AVN
Sbjct: 533 QALTGTQGEIRKSCRAVN 550

BLAST of Cla003054 vs. TrEMBL
Match: A0A124SBH4_CYNCS (Peroxidase OS=Cynara cardunculus var. scolymus GN=Ccrd_007322 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-15
Identity = 45/77 (58.44%), Postives = 60/77 (77.92%), Query Frame = 1

Query: 2   SSFVVDKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSDFAFKFGQALIKMGRIQ 61
           SS VVDKSF+ QI + RG+L+ DQQLALD L+K  V  +A  SDF  KFGQA++K+G ++
Sbjct: 205 SSQVVDKSFYSQIIKGRGVLQFDQQLALDNLSKSTVAAIAGSSDFTTKFGQAMVKLGALK 264

Query: 62  VLTGSEGEIRRTCGAVN 79
           VLT ++GEIRR+C +VN
Sbjct: 265 VLTDTQGEIRRSCRSVN 281


HSP 2 Score: 91.7 bits (226), Expect = 4.4e-16
Identity = 46/79 (58.23%), Postives = 63/79 (79.75%), Query Frame = 1

Query: 2   SSFVVDKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFR--SDFAFKFGQALIKMGR 61
           SSF+VD SF+++I  +RGIL+IDQ+LALDP T+  V  +A    + FA KFGQA++K+G 
Sbjct: 248 SSFIVDNSFYKEIVARRGILQIDQELALDPTTQATVTALANSGTNSFATKFGQAMVKLGA 307

Query: 62  IQVLTGSEGEIRRTCGAVN 79
           ++VLTGS+GEIRR+C AVN
Sbjct: 308 VEVLTGSQGEIRRSCRAVN 326

BLAST of Cla003054 vs. NCBI nr
Match: gi|659071650|ref|XP_008461222.1| (PREDICTED: peroxidase 60-like [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 2.5e-28
Identity = 66/78 (84.62%), Postives = 70/78 (89.74%), Query Frame = 1

Query: 1   MSSFVVDKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSDFAFKFGQALIKMGRI 60
           MSSF+VD SFHRQIS+QRGILEIDQQLA+DPLTKD V NV FRSDF FKFGQA+IKMGRI
Sbjct: 121 MSSFIVDNSFHRQISRQRGILEIDQQLAVDPLTKDLVSNVVFRSDFGFKFGQAMIKMGRI 180

Query: 61  QVLTGSEGEIRRTCGAVN 79
           QVLTGS GEIR TC AVN
Sbjct: 181 QVLTGSLGEIRSTCAAVN 198

BLAST of Cla003054 vs. NCBI nr
Match: gi|700209850|gb|KGN64946.1| (hypothetical protein Csa_1G166260 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 3.2e-28
Identity = 66/78 (84.62%), Postives = 69/78 (88.46%), Query Frame = 1

Query: 1   MSSFVVDKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSDFAFKFGQALIKMGRI 60
           MSSF VD SFHRQIS++RGILEIDQQLALDPLTKD V NVAFRSDF FKFGQA+IKMGR 
Sbjct: 249 MSSFAVDNSFHRQISRRRGILEIDQQLALDPLTKDLVLNVAFRSDFGFKFGQAMIKMGRF 308

Query: 61  QVLTGSEGEIRRTCGAVN 79
           QVLTGS GEIR TC AVN
Sbjct: 309 QVLTGSAGEIRSTCAAVN 326

BLAST of Cla003054 vs. NCBI nr
Match: gi|778664996|ref|XP_011648460.1| (PREDICTED: peroxidase 60 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 3.2e-28
Identity = 66/78 (84.62%), Postives = 69/78 (88.46%), Query Frame = 1

Query: 1   MSSFVVDKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSDFAFKFGQALIKMGRI 60
           MSSF VD SFHRQIS++RGILEIDQQLALDPLTKD V NVAFRSDF FKFGQA+IKMGR 
Sbjct: 121 MSSFAVDNSFHRQISRRRGILEIDQQLALDPLTKDLVLNVAFRSDFGFKFGQAMIKMGRF 180

Query: 61  QVLTGSEGEIRRTCGAVN 79
           QVLTGS GEIR TC AVN
Sbjct: 181 QVLTGSAGEIRSTCAAVN 198

BLAST of Cla003054 vs. NCBI nr
Match: gi|604313391|gb|EYU26722.1| (hypothetical protein MIMGU_mgv1a024318mg [Erythranthe guttata])

HSP 1 Score: 97.4 bits (241), Expect = 1.1e-17
Identity = 47/78 (60.26%), Postives = 61/78 (78.21%), Query Frame = 1

Query: 1   MSSFVVDKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSDFAFKFGQALIKMGRI 60
           +SS  VD S++RQI  +RGIL+IDQ LALDP+TK  V  +A   DF+ KFGQA++K+G I
Sbjct: 254 LSSLTVDNSYYRQIVSKRGILQIDQDLALDPITKPTVSAIANGFDFSTKFGQAMVKLGSI 313

Query: 61  QVLTGSEGEIRRTCGAVN 79
           QVLTG +GEIRR+C A+N
Sbjct: 314 QVLTGKQGEIRRSCRAIN 331

BLAST of Cla003054 vs. NCBI nr
Match: gi|848900035|ref|XP_012850166.1| (PREDICTED: peroxidase 60 [Erythranthe guttata])

HSP 1 Score: 97.4 bits (241), Expect = 1.1e-17
Identity = 47/78 (60.26%), Postives = 61/78 (78.21%), Query Frame = 1

Query: 1   MSSFVVDKSFHRQISQQRGILEIDQQLALDPLTKDFVWNVAFRSDFAFKFGQALIKMGRI 60
           +SS  VD S++RQI  +RGIL+IDQ LALDP+TK  V  +A   DF+ KFGQA++K+G I
Sbjct: 234 LSSLTVDNSYYRQIVSKRGILQIDQDLALDPITKPTVSAIANGFDFSTKFGQAMVKLGSI 293

Query: 61  QVLTGSEGEIRRTCGAVN 79
           QVLTG +GEIRR+C A+N
Sbjct: 294 QVLTGKQGEIRRSCRAIN 311

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PER60_ARATH1.2e-1144.59Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1[more]
PER44_ARATH2.1e-1148.72Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1[more]
PER57_ARATH3.0e-1047.30Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1[more]
PER71_ARATH8.8e-1043.84Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1[more]
PER8_ARATH4.3e-0946.05Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LYA7_CUCSA2.2e-2884.62Peroxidase OS=Cucumis sativus GN=Csa_1G166260 PE=3 SV=1[more]
A0A022QDF1_ERYGU8.0e-1860.26Peroxidase OS=Erythranthe guttata GN=MIMGU_mgv1a024318mg PE=3 SV=1[more]
A0A061GV76_THECC2.3e-1756.41Peroxidase OS=Theobroma cacao GN=TCM_041378 PE=3 SV=1[more]
A0A124SBH4_CYNCS4.4e-1658.97Peroxidase OS=Cynara cardunculus var. scolymus GN=Ccrd_007322 PE=3 SV=1[more]
A0A124SBH4_CYNCS1.3e-1558.44Peroxidase OS=Cynara cardunculus var. scolymus GN=Ccrd_007322 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
gi|659071650|ref|XP_008461222.1|2.5e-2884.62PREDICTED: peroxidase 60-like [Cucumis melo][more]
gi|700209850|gb|KGN64946.1|3.2e-2884.62hypothetical protein Csa_1G166260 [Cucumis sativus][more]
gi|778664996|ref|XP_011648460.1|3.2e-2884.62PREDICTED: peroxidase 60 [Cucumis sativus][more]
gi|604313391|gb|EYU26722.1|1.1e-1760.26hypothetical protein MIMGU_mgv1a024318mg [Erythranthe guttata][more]
gi|848900035|ref|XP_012850166.1|1.1e-1760.26PREDICTED: peroxidase 60 [Erythranthe guttata][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000823Peroxidase_pln
IPR002016Haem_peroxidase_pln/fun/bac
IPR010255Haem_peroxidase
Vocabulary: Molecular Function
TermDefinition
GO:0004601peroxidase activity
GO:0020037heme binding
Vocabulary: Biological Process
TermDefinition
GO:0006979response to oxidative stress
GO:0055114oxidation-reduction process
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0010054 trichoblast differentiation
biological_process GO:0098869 cellular oxidant detoxification
cellular_component GO:0005576 extracellular region
cellular_component GO:0005575 cellular_component
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0009506 plasmodesma
molecular_function GO:0020037 heme binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0016491 oxidoreductase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003054Cla003054.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000823Plant peroxidasePRINTSPR00461PLPEROXIDASEcoord: 13..30
score: 4.3E-6coord: 52..65
score: 4.
IPR002016Haem peroxidase, plant/fungal/bacterialPROFILEPS50873PEROXIDASE_4coord: 1..78
score: 14
IPR010255Haem peroxidaseunknownSSF48113Heme-dependent peroxidasescoord: 3..78
score: 6.14
NoneNo IPR availableGENE3DG3DSA:1.10.420.10coord: 4..57
score: 4.
NoneNo IPR availablePANTHERPTHR31235FAMILY NOT NAMEDcoord: 1..78
score: 2.4