Cla003008 (gene) Watermelon (97103) v1

NameCla003008
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionEndoribonuclease E-like protein (AHRD V1 **-- Q656E2_ORYSJ)
LocationChr4 : 7304968 .. 7309474 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGAGAAGCCAAAGACTAAAGAATGGAGGAAGTTTTTGGTATTTAGGGAGGAGTGGAAAAAGTATAGGGAGAGCTTCTACAGTCATTGCCAAAGGCGGGCAGACGGGGAGAGTGATCCAATTATGAAAGAGAAGTTAATTTCACTTAGGAGAAAGGTCAAAAGGGTATGTACTTGTCCTCTTTGTTTTCCTCTCCATTTGTTTTTGAAACTTTCTTGCTATGATTTGTGTTCTTCAATACCATATCTTGTTGCATTGGTTTTTGTTCGCAAGAGTTTGAAAACAAAATTTAGAGGAGAATTTAGGTTGTAATGTTCACTGCTTGTTATATGGTGATTATTTCCGTTGCCTAGAGTCCAATTTGTGAACAATTAAAGCTGCAACACTTGTTTTCTGTTTTTGCATTCGTTGATCATGAGTGAGAAATATACAGATTGATGATGAAATGGAAATCCACAGTGAACTTCTCAAGGAATTACAGGGCAGCCCAACTGACATTAATGCGATAGTTGCAAAGCGGCGCAAAGAGTTCACAGAGGAATTTTTTAAGTTCCTTACTCTGATATCGGAAACCCATGACAGTTTGGAAGATCGTGATGGTAATATTTGAAATCTTTCATTATTAATTTTAGTTTTAACGTGGATAACCAAGTTTCTTTGTTGGATTAAACTGAGACTCTTATAAATTCAGTTTAGATTTAATCTCAGATTTATTTATTTATTTATTTTTGATAAGATAAGAATTTGTTAATATTTACTGCATCCTTATCTTTGAACCATTTTTACAAGTATTTAGATGAATTTAATCTTTTAGTTTAGGTATGATAATAAATCTACTCCTCTCTAAATCTTGAGGCCCCATAATGCATTTCTTACCTGAGAACTGAGTAATAAAAGTTGTCTTTCTTCATAATTTTTCCCTAAATTAGTTTTGGGATTATTATTTGAAAAGTTTGTATCGTGCATTCACACTGTACCATACATTTCATTATTTTTCGTACTCATCTTTATGATTTAGGATTAAGTAATGGCTTTTGTAATCTATAGTAGTTATCTCAAGAATTGACTAAAGCCCAGATTTGTAACAACATTTTAACTAGCAGATAGAGTTACTCTAATCTGAAGGAAAAAAAAAAAAAAAAATGAAATGAAAGGAAAATAAATAGAAAAAGATTTTATCACTAGTTTTCTCTTGAACTAATTTTTCTATTTGTGCAGCGGTGGCTCGGCTGGCAGCCAGATGTCTGGCTGCAGTTAGTGCTTACGATCGAACATTAGAAAATGTGGAGACATTGGATTCTGCACAGGCCAAATTTGATGATATACTGAATTCTCCCTCATTGGACGTGGCTTGTGAGAAGATTGCAAGTCTTGGAAAGGCAAAGGAACTTGACTCATCGTTGATCCTTTTGATAAACAGTGCTTGGGCTTCTGCAAAAGAATCCACAACCATGAAGAATGAGGTAATGTTTAGATTTATATATGATCTCACTACTTCAACTGCATATTCATTACATTTTAATTCCCAAACTTTCAAATAGTCTGCTTTGCTCCAAGTGGTATGTTTTTGTCTCTCGACTTTGAATAATGCATCTAAAAATTTTGATACCAAATTATTAGATGTGGCTTCAAATACTTGTCTATTTGACATCTATTGTTTTTGTCAAATGAAAAGAGAAAACAAAGTGCATATGTCAGGTTTCTATTTGAAAATTAATGACAAATAATAAAGTAGTTTTTATGCCAAGTTCAAAACTAAAACACAATGTTGGGAAGTTTAGGGAAAAAATTGAATTCACATGAGAGTTTGTGGACACTGAAATAGATTTTCCTCTATCTATATGTGTCATGTCATATGACCCTACAAATCATTCTGGTTTGAAGCCATTATATTATTGTGGATTGTCAATGTCCCTGGCCACAATATTAATTGCTGTTGTTAACTATGAAGTTCTTGAAAGTAACTCCCTGCAACATCCCCAGTTTTGCCCGAGTTGGAAACTTACTCTTATTTTACAATTCATTTCTAAGACGGTCTAACACTTTTTTTTCTTTTCTGAGTAACCGAGCTATCATGTGGAAGAATAAAAAAGTAGGAAAAAATACCCTTTTGGTCCTTAAGTTTTGAGTCTAATTTCTATTTGGTCCCTAGCTTTCAAAATGTAGTCCCCATCCCTCACTTTGATATCGGAGGTATTTTTCTTTGTTTTGCAGGTCCTTTTAAAGTTTTGAGGTTTGTTTCAATTTAGTCCCTAAGTTTAACAATGTCTATGAATTAATTTAAAAGCATTATAGTTAATTAAGTGTCATTATTTTTCATCACTATTAGAATTGAAATTAAAATTTCACTTCATAGTTATTTTAAATCAATTAATGGACATTAATGTTAATGACTGTTAGTCGATATTTAAACTACCACTTTCTTAGGGCCAAATAAAATGAAACTCAAATATCAAGAGCAAAATTGTAACATTTTGAACCCTAAGGACTAAATTGAAATCAATCAAAACTTAAAGATTAAATGTGTAACATTTTGAAATCTAGGGACTAAAGGGAACTAAACCCAAAACTTTGGGTAAAAAAAAAAGGTACTCTTCCAAAAAAAAATGAAAAAAAAAAAAAAAAAAAAAAAACCCTCAGTATATGGGACTCCAATCGAAAAGGATCAAACCTGATTGCTTCACACATTTAGTGTTGGACATGCTTTTTAGAAAATATTTTAGAGTGAAGCTCTGATTATATTTATATCAGCAATGTCGGAAAAATGTTAATCAAATCATTCCTCTTAAAGCACTTATAGAATTTCTTCCACCACTTTTGATAATAGAAAATTTTAGAAAGTGATTTTAATTGGTTAAAAGCACTCTACTCTTTTTAACATCTTAACCAAGCACTGTCCATTTAAAAAAGAAGAAAAAGAAAATTTGTCATTAATAATCACTTTACAAGGCATGCCAAAATACACTAATACAAAAAAGGGAGTTCTGTTTCTAAATTCTCATTATAATTGATATGTTGGAATTGGATTACAAACTTGATTGAAAGTCAATGAAGAGCTGACGATGAATTTTTATGTCTAAGATTACTTGAATATTGTATGCCCTTGGTGAAAAAATGTTCCATCTTTATTGAGTTTGGCAGTCTAAATGAAATACATTCCAAAGCTTTCCAATAGTTTCAGATTGAAATATTATGTCACCTTCTCTATCTTTCTGTGTGTGAATGTAGGTGAAAGAAATAATGTATCATTTATACAAAACCACAAAAAGCAGTCTTAGAAGCATGGCCCCTAAAGAAATAAAGCTGTTAAAACATTTGCTGAACATCGTAGATCCTGAAGAACGATTTTCTGCTTTAGCAACAGCCTTCGCCCCAGGTGATGGAAGTGAACAAAAAGATCCAAATGCTTTGTACACGTGAGTAAGCCTCATCATAATTTATACATTTATTCATGATAATTACATACTTATCTTATAGGTTTCATTAGTCGTCAGAGTTTACTTCAAAATATACCTACTACTTGCTTTGAACTTTTCCGTTTAGTTCATAATGCTTGCAGAACTTTTAGAAAGTAACTATTTTAATTATTATCAATTATTTTGGCATCAATTATTTATCGGATCATGTGGCTCGCAGCTATATAGACTAGTTAAGGCAAGTAATGGATGGGGAACACTCCATACATGCCCAAATCGACTATCAACCCTCATATTAGCTAAAACTATATGACTTTATTATGTTGATAAATTACTAGGATACCTCCTAACAAGAACACTCAAGAATAACATAGAAAACTCAAAAATGCTCAAATATGGAAATATATGAAAATATGTTGTAATATTATAAGAAAAGTAACTAGATAACCTAACCCTTTCGAGAGGGTTAATCTCTCCCAAATTCTCCAAAGGAAATCCTACAAAAATCTTTGTACCTTTATCCCAACCTCACTCCCTCTATTTATAACTAAAAGTCCTAACGAACTTACTATCTATTTACTAGTATGCTGTATGCATACTAATAATCTTAATATCTCCCCGACTATGGGTCTTACATAAATTCAAAATCACATTATCCATCTATTAAATAATTGACAACAAAACAACACTAAGGCCCAAAATGATGCCATAGGAACAGAATAACATCTATTTTGAATACTTGACAATGGTATAAAAATGATGTTCAAACTGATTGTTTGGTTAATGTTTAGGAACCATAATAAAATTTAATAGAATGCAAAGTAAGATTTGGTCATGACTATCATTTTGTGTAATTGGGCAGAACTCCGACAGAGCTGCATAAGTGGATAAAGATAATGCTTGATTCATACCATCTGAACCAGGAAGAAACAGACATAAGAGAAGCAAGGAATATGACTCAGCCTGTTGTTATACAAAGGCTATTCATCCTCAAGGATACTATTGAAACTGAGTATTTGGAACAGAATGAGTCTCACAATCCTCAATCCAAACCAAATCATGTTTCTGAAGATGCGGTTTCTATATAG

mRNA sequence

ATGAATGAGAAGCCAAAGACTAAAGAATGGAGGAAGTTTTTGGTATTTAGGGAGGAGTGGAAAAAGTATAGGGAGAGCTTCTACAGTCATTGCCAAAGGCGGGCAGACGGGGAGAGTGATCCAATTATGAAAGAGAAGTTAATTTCACTTAGGAGAAAGGTCAAAAGGATTGATGATGAAATGGAAATCCACAGTGAACTTCTCAAGGAATTACAGGGCAGCCCAACTGACATTAATGCGATAGTTGCAAAGCGGCGCAAAGAGTTCACAGAGGAATTTTTTAAGTTCCTTACTCTGATATCGGAAACCCATGACAGTTTGGAAGATCGTGATGCGGTGGCTCGGCTGGCAGCCAGATGTCTGGCTGCAGTTAGTGCTTACGATCGAACATTAGAAAATGTGGAGACATTGGATTCTGCACAGGCCAAATTTGATGATATACTGAATTCTCCCTCATTGGACGTGGCTTGTGAGAAGATTGCAAGTCTTGGAAAGGCAAAGGAACTTGACTCATCGTTGATCCTTTTGATAAACAGTGCTTGGGCTTCTGCAAAAGAATCCACAACCATGAAGAATGAGGTGAAAGAAATAATGTATCATTTATACAAAACCACAAAAAGCAGTCTTAGAAGCATGGCCCCTAAAGAAATAAAGCTGTTAAAACATTTGCTGAACATCGTAGATCCTGAAGAACGATTTTCTGCTTTAGCAACAGCCTTCGCCCCAGGTGATGGAAGTGAACAAAAAGATCCAAATGCTTTGTACACAACTCCGACAGAGCTGCATAAGTGGATAAAGATAATGCTTGATTCATACCATCTGAACCAGGAAGAAACAGACATAAGAGAAGCAAGGAATATGACTCAGCCTGTTGTTATACAAAGGCTATTCATCCTCAAGGATACTATTGAAACTGAGTATTTGGAACAGAATGAGTCTCACAATCCTCAATCCAAACCAAATCATGTTTCTGAAGATGCGGTTTCTATATAG

Coding sequence (CDS)

ATGAATGAGAAGCCAAAGACTAAAGAATGGAGGAAGTTTTTGGTATTTAGGGAGGAGTGGAAAAAGTATAGGGAGAGCTTCTACAGTCATTGCCAAAGGCGGGCAGACGGGGAGAGTGATCCAATTATGAAAGAGAAGTTAATTTCACTTAGGAGAAAGGTCAAAAGGATTGATGATGAAATGGAAATCCACAGTGAACTTCTCAAGGAATTACAGGGCAGCCCAACTGACATTAATGCGATAGTTGCAAAGCGGCGCAAAGAGTTCACAGAGGAATTTTTTAAGTTCCTTACTCTGATATCGGAAACCCATGACAGTTTGGAAGATCGTGATGCGGTGGCTCGGCTGGCAGCCAGATGTCTGGCTGCAGTTAGTGCTTACGATCGAACATTAGAAAATGTGGAGACATTGGATTCTGCACAGGCCAAATTTGATGATATACTGAATTCTCCCTCATTGGACGTGGCTTGTGAGAAGATTGCAAGTCTTGGAAAGGCAAAGGAACTTGACTCATCGTTGATCCTTTTGATAAACAGTGCTTGGGCTTCTGCAAAAGAATCCACAACCATGAAGAATGAGGTGAAAGAAATAATGTATCATTTATACAAAACCACAAAAAGCAGTCTTAGAAGCATGGCCCCTAAAGAAATAAAGCTGTTAAAACATTTGCTGAACATCGTAGATCCTGAAGAACGATTTTCTGCTTTAGCAACAGCCTTCGCCCCAGGTGATGGAAGTGAACAAAAAGATCCAAATGCTTTGTACACAACTCCGACAGAGCTGCATAAGTGGATAAAGATAATGCTTGATTCATACCATCTGAACCAGGAAGAAACAGACATAAGAGAAGCAAGGAATATGACTCAGCCTGTTGTTATACAAAGGCTATTCATCCTCAAGGATACTATTGAAACTGAGTATTTGGAACAGAATGAGTCTCACAATCCTCAATCCAAACCAAATCATGTTTCTGAAGATGCGGTTTCTATATAG

Protein sequence

MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRADGESDPIMKEKLISLRRKVKRIDDEMEIHSELLKELQGSPTDINAIVAKRRKEFTEEFFKFLTLISETHDSLEDRDAVARLAARCLAAVSAYDRTLENVETLDSAQAKFDDILNSPSLDVACEKIASLGKAKELDSSLILLINSAWASAKESTTMKNEVKEIMYHLYKTTKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAFAPGDGSEQKDPNALYTTPTELHKWIKIMLDSYHLNQEETDIREARNMTQPVVIQRLFILKDTIETEYLEQNESHNPQSKPNHVSEDAVSI
BLAST of Cla003008 vs. Swiss-Prot
Match: Y4920_ARATH (Uncharacterized protein At4g37920, chloroplastic OS=Arabidopsis thaliana GN=At4g37920 PE=1 SV=2)

HSP 1 Score: 473.8 bits (1218), Expect = 1.6e-132
Identity = 231/310 (74.52%), Postives = 271/310 (87.42%), Query Frame = 1

Query: 1   MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRADGESDPIMKEKLISLRRKVKRIDDE 60
           +NEKPK K+W+ +LV R+EW KY  +FY  C+ RAD E+DPI+K+KL+SL  KVK+ID E
Sbjct: 95  LNEKPKVKQWKTYLVLRDEWNKYSVNFYKRCRIRADTETDPILKQKLVSLESKVKKIDKE 154

Query: 61  MEIHSELLKELQGSPTDINAIVAKRRKEFTEEFFKFLTLISETHDSLEDRDAVARLAARC 120
           ME H++LLKE+Q +PTDINAI AKRR++FT EFF+++TL+SET D LEDRDAVARLA RC
Sbjct: 155 MEKHNDLLKEIQENPTDINAIAAKRRRDFTGEFFRYVTLLSETLDGLEDRDAVARLATRC 214

Query: 121 LAAVSAYDRTLENVETLDSAQAKFDDILNSPSLDVACEKIASLGKAKELDSSLILLINSA 180
           L+AVSAYD TLE+VETLD+AQAKF+DILNSPS+D ACEKI SL KAKELDSSLILLINSA
Sbjct: 215 LSAVSAYDNTLESVETLDTAQAKFEDILNSPSVDSACEKIRSLAKAKELDSSLILLINSA 274

Query: 181 WASAKESTTMKNEVKEIMYHLYKTTKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAF 240
           +A+AKES T+ NE K+IMYHLYK TKSSLRS+ PKEIKLLK+LLNI DPEERFSALATAF
Sbjct: 275 YAAAKESQTVTNEAKDIMYHLYKATKSSLRSITPKEIKLLKYLLNITDPEERFSALATAF 334

Query: 241 APGDGSEQKDPNALYTTPTELHKWIKIMLDSYHLNQEETDIREARNMTQPVVIQRLFILK 300
           +PGD  E KDP ALYTTP ELHKWIKIMLD+YHLN+EETDI+EA+ M+QP+VIQRLFILK
Sbjct: 335 SPGDDHEAKDPKALYTTPKELHKWIKIMLDAYHLNKEETDIKEAKQMSQPIVIQRLFILK 394

Query: 301 DTIETEYLEQ 311
           DTIE EYL++
Sbjct: 395 DTIEDEYLDK 404

BLAST of Cla003008 vs. TrEMBL
Match: M5VYC6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006103mg PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 2.6e-142
Identity = 253/325 (77.85%), Postives = 286/325 (88.00%), Query Frame = 1

Query: 1   MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRADGESDPIMKEKLISLRRKVKRIDDE 60
           MNEKP+ KEWRKFLVFRE+W+KY+ESFY+ C+ RAD E D  MKEK  SL RKVK+IDDE
Sbjct: 102 MNEKPRAKEWRKFLVFREDWEKYKESFYNRCRTRADMEGDQTMKEKFTSLGRKVKKIDDE 161

Query: 61  MEIHSELLKELQGSPTDINAIVAKRRKEFTEEFFKFLTLISETHDSLEDRDAVARLAARC 120
           ME HSELLKE+Q +PTD+NAIVA+RRK+FTEEFF+ + L+SE +DSLEDRDA+ARL ARC
Sbjct: 162 MERHSELLKEIQDNPTDVNAIVARRRKDFTEEFFRHVNLLSEVYDSLEDRDAMARLGARC 221

Query: 121 LAAVSAYDRTLENVETLDSAQAKFDDILNSPSLDVACEKIASLGKAKELDSSLILLINSA 180
           L+AVSAYD TLE VETLD+AQAKFDD+LNSPS+DVACEKI SL KAKELDSSL+LLINSA
Sbjct: 222 LSAVSAYDNTLEYVETLDTAQAKFDDMLNSPSVDVACEKIKSLAKAKELDSSLVLLINSA 281

Query: 181 WASAKESTTMKNEVKEIMYHLYKTTKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAF 240
           WASAKESTTMKNEVK+IMYHLYK TKSSLRS+APKEIKLLKHLLNI DPEERFSALATAF
Sbjct: 282 WASAKESTTMKNEVKDIMYHLYKATKSSLRSIAPKEIKLLKHLLNITDPEERFSALATAF 341

Query: 241 APGDGSEQKDPNALYTTPTELHKWIKIMLDSYHLNQEETDIREARNMTQPVVIQRLFILK 300
           +PGDG E KDP A+YTTP ELHKWIKIMLD+YHLN EETDIREA+ MTQPVVIQRLFILK
Sbjct: 342 SPGDGPEAKDPKAVYTTPKELHKWIKIMLDAYHLNAEETDIREAKQMTQPVVIQRLFILK 401

Query: 301 DTIETEYLEQNESHNPQSKPNHVSE 326
           +TIE EYLE++     Q++     E
Sbjct: 402 ETIEEEYLERSTDQKSQTEDTKPEE 426

BLAST of Cla003008 vs. TrEMBL
Match: A0A0R0L5D1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G019900 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 4.4e-142
Identity = 248/326 (76.07%), Postives = 290/326 (88.96%), Query Frame = 1

Query: 1   MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRADGESDPIMKEKLISLRRKVKRIDDE 60
           +NEK K+KEWRK+L+FREEWKKYR+ FY+ CQRRAD E+DP+MKEK ISLRRK+K+IDDE
Sbjct: 13  LNEKTKSKEWRKYLIFREEWKKYRDRFYNRCQRRADMENDPVMKEKFISLRRKLKKIDDE 72

Query: 61  MEIHSELLKELQGSPTDINAIVAKRRKEFTEEFFKFLTLISETHDSLEDRDAVARLAARC 120
           ME H ELL E+Q SP DINAIVA+RRK+FT EFF +L+LIS+T+DSLEDRD ++RL +RC
Sbjct: 73  MEGHYELLMEIQDSPMDINAIVARRRKDFTGEFFHYLSLISDTYDSLEDRDGISRLGSRC 132

Query: 121 LAAVSAYDRTLENVETLDSAQAKFDDILNSPSLDVACEKIASLGKAKELDSSLILLINSA 180
           L+AVSAYD TLEN+ETLD+AQAKFDDILNSPS+D+AC+KI SL KAKELDSSLILLI+SA
Sbjct: 133 LSAVSAYDNTLENIETLDAAQAKFDDILNSPSIDIACQKIKSLAKAKELDSSLILLISSA 192

Query: 181 WASAKESTTMKNEVKEIMYHLYKTTKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAF 240
           WA AKESTTMKNEVK+IMY LY+ TKSSLRS+ PKEIKLLKHLLNI+DPEERFSALATAF
Sbjct: 193 WAKAKESTTMKNEVKDIMYQLYRATKSSLRSITPKEIKLLKHLLNIIDPEERFSALATAF 252

Query: 241 APGDGSEQKDPNALYTTPTELHKWIKIMLDSYHLNQEETDIREARNMTQPVVIQRLFILK 300
            PGD  E KDPNALYTTP ELHKWIKIMLD+YHLN+EETD+REAR MT PVVIQRLFILK
Sbjct: 253 TPGDEHEAKDPNALYTTPKELHKWIKIMLDAYHLNKEETDLREARQMTDPVVIQRLFILK 312

Query: 301 DTIETEYLEQNESHNPQSKPNHVSED 327
           DTIE EY+E++ +   ++K +  SE+
Sbjct: 313 DTIEQEYMEKDTTQKSETKDDSKSEE 338

BLAST of Cla003008 vs. TrEMBL
Match: A0A0B2PBI0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_024255 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 4.4e-142
Identity = 248/326 (76.07%), Postives = 290/326 (88.96%), Query Frame = 1

Query: 1   MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRADGESDPIMKEKLISLRRKVKRIDDE 60
           +NEK K+KEWRK+L+FREEWKKYR+ FY+ CQRRAD E+DP+MKEK ISLRRK+K+IDDE
Sbjct: 106 LNEKTKSKEWRKYLIFREEWKKYRDRFYNRCQRRADMENDPVMKEKFISLRRKLKKIDDE 165

Query: 61  MEIHSELLKELQGSPTDINAIVAKRRKEFTEEFFKFLTLISETHDSLEDRDAVARLAARC 120
           ME H ELL E+Q SP DINAIVA+RRK+FT EFF +L+LIS+T+DSLEDRD ++RL +RC
Sbjct: 166 MEGHYELLMEIQDSPMDINAIVARRRKDFTGEFFHYLSLISDTYDSLEDRDGISRLGSRC 225

Query: 121 LAAVSAYDRTLENVETLDSAQAKFDDILNSPSLDVACEKIASLGKAKELDSSLILLINSA 180
           L+AVSAYD TLEN+ETLD+AQAKFDDILNSPS+D+AC+KI SL KAKELDSSLILLI+SA
Sbjct: 226 LSAVSAYDNTLENIETLDAAQAKFDDILNSPSIDIACQKIKSLAKAKELDSSLILLISSA 285

Query: 181 WASAKESTTMKNEVKEIMYHLYKTTKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAF 240
           WA AKESTTMKNEVK+IMY LY+ TKSSLRS+ PKEIKLLKHLLNI+DPEERFSALATAF
Sbjct: 286 WAKAKESTTMKNEVKDIMYQLYRATKSSLRSITPKEIKLLKHLLNIIDPEERFSALATAF 345

Query: 241 APGDGSEQKDPNALYTTPTELHKWIKIMLDSYHLNQEETDIREARNMTQPVVIQRLFILK 300
            PGD  E KDPNALYTTP ELHKWIKIMLD+YHLN+EETD+REAR MT PVVIQRLFILK
Sbjct: 346 TPGDEHEAKDPNALYTTPKELHKWIKIMLDAYHLNKEETDLREARQMTDPVVIQRLFILK 405

Query: 301 DTIETEYLEQNESHNPQSKPNHVSED 327
           DTIE EY+E++ +   ++K +  SE+
Sbjct: 406 DTIEQEYMEKDTTQKSETKDDSKSEE 431

BLAST of Cla003008 vs. TrEMBL
Match: I1J4X3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G019900 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 4.4e-142
Identity = 248/326 (76.07%), Postives = 290/326 (88.96%), Query Frame = 1

Query: 1   MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRADGESDPIMKEKLISLRRKVKRIDDE 60
           +NEK K+KEWRK+L+FREEWKKYR+ FY+ CQRRAD E+DP+MKEK ISLRRK+K+IDDE
Sbjct: 106 LNEKTKSKEWRKYLIFREEWKKYRDRFYNRCQRRADMENDPVMKEKFISLRRKLKKIDDE 165

Query: 61  MEIHSELLKELQGSPTDINAIVAKRRKEFTEEFFKFLTLISETHDSLEDRDAVARLAARC 120
           ME H ELL E+Q SP DINAIVA+RRK+FT EFF +L+LIS+T+DSLEDRD ++RL +RC
Sbjct: 166 MEGHYELLMEIQDSPMDINAIVARRRKDFTGEFFHYLSLISDTYDSLEDRDGISRLGSRC 225

Query: 121 LAAVSAYDRTLENVETLDSAQAKFDDILNSPSLDVACEKIASLGKAKELDSSLILLINSA 180
           L+AVSAYD TLEN+ETLD+AQAKFDDILNSPS+D+AC+KI SL KAKELDSSLILLI+SA
Sbjct: 226 LSAVSAYDNTLENIETLDAAQAKFDDILNSPSIDIACQKIKSLAKAKELDSSLILLISSA 285

Query: 181 WASAKESTTMKNEVKEIMYHLYKTTKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAF 240
           WA AKESTTMKNEVK+IMY LY+ TKSSLRS+ PKEIKLLKHLLNI+DPEERFSALATAF
Sbjct: 286 WAKAKESTTMKNEVKDIMYQLYRATKSSLRSITPKEIKLLKHLLNIIDPEERFSALATAF 345

Query: 241 APGDGSEQKDPNALYTTPTELHKWIKIMLDSYHLNQEETDIREARNMTQPVVIQRLFILK 300
            PGD  E KDPNALYTTP ELHKWIKIMLD+YHLN+EETD+REAR MT PVVIQRLFILK
Sbjct: 346 TPGDEHEAKDPNALYTTPKELHKWIKIMLDAYHLNKEETDLREARQMTDPVVIQRLFILK 405

Query: 301 DTIETEYLEQNESHNPQSKPNHVSED 327
           DTIE EY+E++ +   ++K +  SE+
Sbjct: 406 DTIEQEYMEKDTTQKSETKDDSKSEE 431

BLAST of Cla003008 vs. TrEMBL
Match: A0A151TH46_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_012672 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 9.8e-142
Identity = 248/326 (76.07%), Postives = 290/326 (88.96%), Query Frame = 1

Query: 1   MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRADGESDPIMKEKLISLRRKVKRIDDE 60
           +NEK K+KEW+K+L+FREEWKKYR+ FYS CQRRAD E+DPIMKEK ISLRRKVK+IDDE
Sbjct: 101 LNEKTKSKEWKKYLIFREEWKKYRDRFYSRCQRRADMENDPIMKEKFISLRRKVKKIDDE 160

Query: 61  MEIHSELLKELQGSPTDINAIVAKRRKEFTEEFFKFLTLISETHDSLEDRDAVARLAARC 120
           ME H ELLKE+Q SPTDINAIVA+RRK+FT EFF +L+L+S+T+DSLEDRD +ARL +RC
Sbjct: 161 MEEHYELLKEIQDSPTDINAIVAQRRKDFTGEFFNYLSLLSDTYDSLEDRDGIARLGSRC 220

Query: 121 LAAVSAYDRTLENVETLDSAQAKFDDILNSPSLDVACEKIASLGKAKELDSSLILLINSA 180
           L++VSAYD TLEN+ETLD+AQAKFDDILNSPS+DVAC+KI SL KAKELDS+LILLI+SA
Sbjct: 221 LSSVSAYDNTLENIETLDTAQAKFDDILNSPSIDVACQKIKSLAKAKELDSTLILLISSA 280

Query: 181 WASAKESTTMKNEVKEIMYHLYKTTKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAF 240
           WA AKESTTMK+EVK+IMY LYK TKSSLRS+ PKEIKLLKHLLNI+DPEERFSALATAF
Sbjct: 281 WAKAKESTTMKDEVKDIMYQLYKATKSSLRSITPKEIKLLKHLLNIIDPEERFSALATAF 340

Query: 241 APGDGSEQKDPNALYTTPTELHKWIKIMLDSYHLNQEETDIREARNMTQPVVIQRLFILK 300
           +PGD  E KDPN LYTTP ELHKWIKIMLD+YHLN+EETD+REA+ MT PVVIQRLFILK
Sbjct: 341 SPGDELEAKDPNTLYTTPKELHKWIKIMLDAYHLNKEETDLREAKQMTDPVVIQRLFILK 400

Query: 301 DTIETEYLEQNESHNPQSKPNHVSED 327
           DTIE EY+E+      ++K +  S++
Sbjct: 401 DTIEQEYMEKGTPQKSETKDDSKSKE 426

BLAST of Cla003008 vs. NCBI nr
Match: gi|659082885|ref|XP_008442082.1| (PREDICTED: uncharacterized protein At4g37920, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 615.1 bits (1585), Expect = 6.9e-173
Identity = 312/332 (93.98%), Postives = 321/332 (96.69%), Query Frame = 1

Query: 1   MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRADGESDPIMKEKLISLRRKVKRIDDE 60
           MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRAD ESDPIMKEKLISLRRKVK+IDDE
Sbjct: 21  MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRADWESDPIMKEKLISLRRKVKKIDDE 80

Query: 61  MEIHSELLKELQGSPTDINAIVAKRRKEFTEEFFKFLTLISETHDSLEDRDAVARLAARC 120
           MEIHSELLKELQ SPTDINAIVA RRKEFT+EFFKFLTLISETHDSLEDRDAVARLAARC
Sbjct: 81  MEIHSELLKELQDSPTDINAIVANRRKEFTDEFFKFLTLISETHDSLEDRDAVARLAARC 140

Query: 121 LAAVSAYDRTLENVETLDSAQAKFDDILNSPSLDVACEKIASLGKAKELDSSLILLINSA 180
           LAAVSAYDRTLENVETLDSAQAKFD+ILNSPSLDVACEKIASL KAKELDSSLILLINSA
Sbjct: 141 LAAVSAYDRTLENVETLDSAQAKFDNILNSPSLDVACEKIASLAKAKELDSSLILLINSA 200

Query: 181 WASAKESTTMKNEVKEIMYHLYKTTKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAF 240
           WASAKESTTMKNEVKEIMYHLYK TKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAF
Sbjct: 201 WASAKESTTMKNEVKEIMYHLYKATKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAF 260

Query: 241 APGDGSEQKDPNALYTTPTELHKWIKIMLDSYHLNQEETDIREARNMTQPVVIQRLFILK 300
           +PGDGSEQKDPNALYTTP ELHKWIKIMLDSYHLNQE+TDIREARNMTQP+VIQRLFILK
Sbjct: 261 SPGDGSEQKDPNALYTTPKELHKWIKIMLDSYHLNQEDTDIREARNMTQPIVIQRLFILK 320

Query: 301 DTIETEYLEQNESHNPQSKP--NHVSEDAVSI 331
           DTIETEYLEQN+  NPQS+P  NH SEDA+SI
Sbjct: 321 DTIETEYLEQNQFQNPQSRPNHNHGSEDAISI 352

BLAST of Cla003008 vs. NCBI nr
Match: gi|659082883|ref|XP_008442081.1| (PREDICTED: uncharacterized protein At4g37920, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 615.1 bits (1585), Expect = 6.9e-173
Identity = 312/332 (93.98%), Postives = 321/332 (96.69%), Query Frame = 1

Query: 1   MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRADGESDPIMKEKLISLRRKVKRIDDE 60
           MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRAD ESDPIMKEKLISLRRKVK+IDDE
Sbjct: 104 MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRADWESDPIMKEKLISLRRKVKKIDDE 163

Query: 61  MEIHSELLKELQGSPTDINAIVAKRRKEFTEEFFKFLTLISETHDSLEDRDAVARLAARC 120
           MEIHSELLKELQ SPTDINAIVA RRKEFT+EFFKFLTLISETHDSLEDRDAVARLAARC
Sbjct: 164 MEIHSELLKELQDSPTDINAIVANRRKEFTDEFFKFLTLISETHDSLEDRDAVARLAARC 223

Query: 121 LAAVSAYDRTLENVETLDSAQAKFDDILNSPSLDVACEKIASLGKAKELDSSLILLINSA 180
           LAAVSAYDRTLENVETLDSAQAKFD+ILNSPSLDVACEKIASL KAKELDSSLILLINSA
Sbjct: 224 LAAVSAYDRTLENVETLDSAQAKFDNILNSPSLDVACEKIASLAKAKELDSSLILLINSA 283

Query: 181 WASAKESTTMKNEVKEIMYHLYKTTKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAF 240
           WASAKESTTMKNEVKEIMYHLYK TKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAF
Sbjct: 284 WASAKESTTMKNEVKEIMYHLYKATKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAF 343

Query: 241 APGDGSEQKDPNALYTTPTELHKWIKIMLDSYHLNQEETDIREARNMTQPVVIQRLFILK 300
           +PGDGSEQKDPNALYTTP ELHKWIKIMLDSYHLNQE+TDIREARNMTQP+VIQRLFILK
Sbjct: 344 SPGDGSEQKDPNALYTTPKELHKWIKIMLDSYHLNQEDTDIREARNMTQPIVIQRLFILK 403

Query: 301 DTIETEYLEQNESHNPQSKP--NHVSEDAVSI 331
           DTIETEYLEQN+  NPQS+P  NH SEDA+SI
Sbjct: 404 DTIETEYLEQNQFQNPQSRPNHNHGSEDAISI 435

BLAST of Cla003008 vs. NCBI nr
Match: gi|449457285|ref|XP_004146379.1| (PREDICTED: uncharacterized protein At4g37920, chloroplastic [Cucumis sativus])

HSP 1 Score: 607.4 bits (1565), Expect = 1.4e-170
Identity = 307/332 (92.47%), Postives = 318/332 (95.78%), Query Frame = 1

Query: 1   MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRADGESDPIMKEKLISLRRKVKRIDDE 60
           +NEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRAD E DPIMKEKLISLRRKVK+IDDE
Sbjct: 104 LNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRADWEDDPIMKEKLISLRRKVKKIDDE 163

Query: 61  MEIHSELLKELQGSPTDINAIVAKRRKEFTEEFFKFLTLISETHDSLEDRDAVARLAARC 120
           MEIHSELLKELQ SPTDINAIVAKR KEFT+EFFKFLTLISETHDSLEDRDAVARLAARC
Sbjct: 164 MEIHSELLKELQDSPTDINAIVAKRHKEFTDEFFKFLTLISETHDSLEDRDAVARLAARC 223

Query: 121 LAAVSAYDRTLENVETLDSAQAKFDDILNSPSLDVACEKIASLGKAKELDSSLILLINSA 180
           LAAVSAY+RTLENVETLDSAQ KFD+ILNSPSLDVACEKIASL KAKELDSSLILLINSA
Sbjct: 224 LAAVSAYNRTLENVETLDSAQVKFDNILNSPSLDVACEKIASLAKAKELDSSLILLINSA 283

Query: 181 WASAKESTTMKNEVKEIMYHLYKTTKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAF 240
           WASAKESTTMKNEVKEIMYHLYK TKSSLRSMAPKEIKLLKHLLNIVDPEERFSALAT F
Sbjct: 284 WASAKESTTMKNEVKEIMYHLYKATKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATTF 343

Query: 241 APGDGSEQKDPNALYTTPTELHKWIKIMLDSYHLNQEETDIREARNMTQPVVIQRLFILK 300
           +PGDGSEQKDPNALYTTP ELHKWIKIMLDSYHLNQE+TDIREARNMTQP+VIQRLFILK
Sbjct: 344 SPGDGSEQKDPNALYTTPKELHKWIKIMLDSYHLNQEDTDIREARNMTQPIVIQRLFILK 403

Query: 301 DTIETEYLEQNESHNPQSKP--NHVSEDAVSI 331
           DTIETEYLEQN+  NPQS+P  NH SEDA+SI
Sbjct: 404 DTIETEYLEQNQFQNPQSRPSHNHGSEDAISI 435

BLAST of Cla003008 vs. NCBI nr
Match: gi|645219622|ref|XP_008236637.1| (PREDICTED: uncharacterized protein At4g37920, chloroplastic [Prunus mume])

HSP 1 Score: 516.9 bits (1330), Expect = 2.6e-143
Identity = 256/325 (78.77%), Postives = 286/325 (88.00%), Query Frame = 1

Query: 1   MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRADGESDPIMKEKLISLRRKVKRIDDE 60
           MNEKP+ KEWRK LVFRE+W+KYRESFY+ C+ RAD E DP MKEK  SL RKVK+IDDE
Sbjct: 102 MNEKPRAKEWRKLLVFREDWEKYRESFYNRCRTRADMEGDPTMKEKFTSLGRKVKKIDDE 161

Query: 61  MEIHSELLKELQGSPTDINAIVAKRRKEFTEEFFKFLTLISETHDSLEDRDAVARLAARC 120
           ME HSELLKE+Q +PTDINA+VA+RRK+FTEEFF+ L L+SE +DSLEDRDA+ARL ARC
Sbjct: 162 MERHSELLKEIQDNPTDINALVARRRKDFTEEFFRHLNLLSEVYDSLEDRDAMARLGARC 221

Query: 121 LAAVSAYDRTLENVETLDSAQAKFDDILNSPSLDVACEKIASLGKAKELDSSLILLINSA 180
           L+AVSAYD TLE VETLD+AQAKFDDILNSPS+DVACEKI SL KAKELDSSL+LLINSA
Sbjct: 222 LSAVSAYDNTLEYVETLDTAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLVLLINSA 281

Query: 181 WASAKESTTMKNEVKEIMYHLYKTTKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAF 240
           WASAKESTTMKNEVK+IMYHLYK TKSSLRS+APKEIKLLKHLLNI DPEERFSALATAF
Sbjct: 282 WASAKESTTMKNEVKDIMYHLYKATKSSLRSIAPKEIKLLKHLLNITDPEERFSALATAF 341

Query: 241 APGDGSEQKDPNALYTTPTELHKWIKIMLDSYHLNQEETDIREARNMTQPVVIQRLFILK 300
           +PGDG E KDP A+YTTP ELHKWIKIMLD+YHLN EETDIREA+ MTQPVVIQRLFILK
Sbjct: 342 SPGDGPEAKDPKAVYTTPKELHKWIKIMLDAYHLNAEETDIREAKQMTQPVVIQRLFILK 401

Query: 301 DTIETEYLEQNESHNPQSKPNHVSE 326
           +TIE EYLE++     Q++     E
Sbjct: 402 ETIEEEYLERSTDQKSQTEDTKPEE 426

BLAST of Cla003008 vs. NCBI nr
Match: gi|694437695|ref|XP_009345861.1| (PREDICTED: uncharacterized protein At4g37920, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 515.0 bits (1325), Expect = 9.7e-143
Identity = 252/319 (79.00%), Postives = 286/319 (89.66%), Query Frame = 1

Query: 1   MNEKPKTKEWRKFLVFREEWKKYRESFYSHCQRRADGESDPIMKEKLISLRRKVKRIDDE 60
           MNEKP+TK+WRKFLVFRE+WKKYRE+FY+ C+ RAD E DP MKEK  SL RKVK+IDDE
Sbjct: 111 MNEKPRTKDWRKFLVFREDWKKYRENFYNRCRTRADTEVDPTMKEKFTSLGRKVKKIDDE 170

Query: 61  MEIHSELLKELQGSPTDINAIVAKRRKEFTEEFFKFLTLISETHDSLEDRDAVARLAARC 120
           ME H+ELL E+Q +PTD+NAIVA+RR++FTEEFF+ L L+SE +DSLEDRDA+ARL ARC
Sbjct: 171 MERHNELLNEIQDNPTDVNAIVARRREDFTEEFFRHLNLLSEIYDSLEDRDAMARLGARC 230

Query: 121 LAAVSAYDRTLENVETLDSAQAKFDDILNSPSLDVACEKIASLGKAKELDSSLILLINSA 180
           L+AVSAYD TLE VETLD+AQAKFDDILNSPS+DVACEKI SL KAKELDSSL+LLINSA
Sbjct: 231 LSAVSAYDNTLEYVETLDTAQAKFDDILNSPSMDVACEKIKSLAKAKELDSSLVLLINSA 290

Query: 181 WASAKESTTMKNEVKEIMYHLYKTTKSSLRSMAPKEIKLLKHLLNIVDPEERFSALATAF 240
           WASAKESTTMKNEVK++MYHLYK TKSSLRS+APKEIKLLKHLLNI DPEERFSALATAF
Sbjct: 291 WASAKESTTMKNEVKDVMYHLYKATKSSLRSIAPKEIKLLKHLLNITDPEERFSALATAF 350

Query: 241 APGDGSEQKDPNALYTTPTELHKWIKIMLDSYHLNQEETDIREARNMTQPVVIQRLFILK 300
           +PGDG E KDP A+YTTP ELHKWIKIMLD+YHLN EETDIREA+ MTQPVVIQRLFILK
Sbjct: 351 SPGDGPEAKDPKAVYTTPKELHKWIKIMLDAYHLNAEETDIREAKQMTQPVVIQRLFILK 410

Query: 301 DTIETEYLEQNESHNPQSK 320
           +TIE EYLE++     Q++
Sbjct: 411 ETIEQEYLERSTEQESQAE 429

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Y4920_ARATH1.6e-13274.52Uncharacterized protein At4g37920, chloroplastic OS=Arabidopsis thaliana GN=At4g... [more]
Match NameE-valueIdentityDescription
M5VYC6_PRUPE2.6e-14277.85Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006103mg PE=4 SV=1[more]
A0A0R0L5D1_SOYBN4.4e-14276.07Uncharacterized protein OS=Glycine max GN=GLYMA_01G019900 PE=4 SV=1[more]
A0A0B2PBI0_GLYSO4.4e-14276.07Uncharacterized protein OS=Glycine soja GN=glysoja_024255 PE=4 SV=1[more]
I1J4X3_SOYBN4.4e-14276.07Uncharacterized protein OS=Glycine max GN=GLYMA_01G019900 PE=4 SV=1[more]
A0A151TH46_CAJCA9.8e-14276.07Uncharacterized protein OS=Cajanus cajan GN=KK1_012672 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659082885|ref|XP_008442082.1|6.9e-17393.98PREDICTED: uncharacterized protein At4g37920, chloroplastic isoform X2 [Cucumis ... [more]
gi|659082883|ref|XP_008442081.1|6.9e-17393.98PREDICTED: uncharacterized protein At4g37920, chloroplastic isoform X1 [Cucumis ... [more]
gi|449457285|ref|XP_004146379.1|1.4e-17092.47PREDICTED: uncharacterized protein At4g37920, chloroplastic [Cucumis sativus][more]
gi|645219622|ref|XP_008236637.1|2.6e-14378.77PREDICTED: uncharacterized protein At4g37920, chloroplastic [Prunus mume][more]
gi|694437695|ref|XP_009345861.1|9.7e-14379.00PREDICTED: uncharacterized protein At4g37920, chloroplastic [Pyrus x bretschneid... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU32234watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU70416watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003008Cla003008.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU32234WMU32234transcribed_cluster
WMU70416WMU70416transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31755FAMILY NOT NAMEDcoord: 1..323
score: 1.5E
NoneNo IPR availablePANTHERPTHR31755:SF2SUBFAMILY NOT NAMEDcoord: 1..323
score: 1.5E