Cla002975 (gene) Watermelon (97103) v1

Overview
NameCla002975
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionAuxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein
LocationChr6 : 14874554 .. 14879737 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGCTTAATTTACTTTGAAGAGACGGAGCTCCGCCTTGGACTTCCCGGCGGGGACGGAAGAGGCGACGGGGAAGCCGTGAAGAAAAGAGGTTTCACTGAAACTGTGGATTTGAAGCTGAATCTTGTGACCGATTCTGACGAAGGCAACAAAACGACGGAGAAAAATGTCGCTTTGAGCTCCGCCGGTAAAGATCTTCCCAAGCCTCCTCCGGCCAAGTATAGTTCTCTCTCATATCTCCCTCTGTTTTTCTTTTTTCTTTTTTTTAATTGTTCTTGAAAATACTTTTAGTTAAAAACGTTTTTTTTCTTTGTCAGTCAACGGTTAAAAAATCGTACATAAAAAATGGAAGTTACTTTTTTAAAAAAATGAAGTAAAAAAAGGTTAATAACAATTAATAAACAGATTTTCAGCATAGGAAGAACATTAAAAATAATTATATTGGTTAAGAAATTAGAATTTGCATAAAGGGTATAAAATTTTTTACCTTCCATACGGAGATACTTTTCTATCCTAAAAAGATTAGATGAAGACAAAATTCAAAAAAGAAAAAGAAAATATATATATATAGTTTGACAATATAAGATGGAAAATTTAATCTCACTTTGATGTTTGATAATACAAATTTAATATTTATTAAGTTATGATTATGTTGAACAAATAAAAAATTATTTGCATCCTTAATATTAGGAGACTAAAATGTAATATATTGATATCTATTCCTTTGGTAAAGAAAAGGTAGTGGGATTAATATTTATTAAAACTTGAATTATTAAAAAAGTAATGTATTTTTTTATATAGTTGTTAGGTACTATTTGGAAAATTAGGGCTATAATTAGAAATTGTAGTGATAATGTTTTTATGGCCATCAATAATTGAGTTGGGAAGAGAAAGAAATAATGACCAGGTAAACAAAAAGTAAAATAATTGTGGTTTCGGATTTGAAGGAAATTTTTTGTTTAGTTGTCGGAAAACACACGAAAACTCCAAAACATATGGAATCTTCTTTTTCTTTTTCTCAACAGTTAATTTCCAAAAAGAAATAAAAAGCATCGAACGTGTCCGAGGAAAAGTAATCAAGTAAAAGTTTTTAAAAATCAAAAAGAAATATTCATATAAATTTTGAATTTAGTTTTCATTTATTTTAATATATTATATATTTTTATCTTGAATTTTAAATTTTGTCTTCATTTTTGGCTTGTACTTTTAAAAATTTATTCTTTTAAGTTTCATTTTTTTTCTTCATTTTCAGCTATTAATATTAGAAAAAATTTCACAAACCACCTTTAAACGGGGAGTTTTGTTACAATTACATTGTTGAAGTTGAACATTTAATTTGATCAATCAACTTCTTGAAGTTGGTTAAGTGTTGCAAAAAACTCTTCTCTTTCAATTGGTGCTAAATTCGGAAAGGATAAATTCGTAAATTCACACAATCTTCATACTGATGGTTTCTGCTCCATCTTCTTCCAACCTCGTTGAACCTTCTTTTTGATGCCGATATTTGAGATTCAGTGGTAGCCACCAAAATTTAGGTTTCGCCTTCAAGCCCGTCACCTTTGTTCTTTGAAGAAGGGTATCTCTTCCAATTGTTTGTTGAAATCCACCGATATTTTTTATTTTTATATTTTATTATGACAATTGGAAGTCATATCTCATTATTATGATAAGAGCTTTGTGTGCATATATATATATATATATTATTCTTTTTTCTTTCTGTAACTTATCAATTGACAAGCCTCTCTAATTTAACATCAACTACTTCAACGGGCTGATTGCAACACTTAATAAATATCAATCAAATTAAAAGTTTAAGTATGTCATGATTATAAATCTCATAGTTTAAAGGTGGTTTATGTAATCTTACCTTATTAATATCTATTAGCTAATTTAAAAAATTATAATTAATTAGTTTTTATTCGTTTTCAAGGGGAATTATTCTAAATGGCAAATCTGTTGAAAATATTTTCAAATATAGCAAAATATAACTGTTTGTTAGTGATAAACAATGATAGATGATAGTAATCTATTAATGATAGACAATGATATTTTTTACTATATTTGTAAATATTTTGACTCATTTTATTATATTTGAAAACAACCTAATTTTTTATCACTATTTAAGATTACTTTCAAATTTTTACTTCATTATTTTAGATTAACTAATTGGAAAGTTAATGTTAAAAACTAAAGTAGGCATAGGCATTAGCTATTACTCGAGAGTAAACATATAAAAATATTAAAGCTTTGAAATCATAGAAAAATAAACTTAAAATTCAATGGTGAAGATTGTAAAATTTTAAATTTGAGAACTGAATAAAAACTTGAGACAAACTTGAGACAGTTGCAAATATAACAATTAGGTTCAAAGTATTTATAGATATAGCACAATGCAAAAGAATTTGCAAATATAGCAAAATTTAGATTTTGTTTTCAAAGTTGATTAGTGATAGACCATATTAATAGTAGGGTCTACTAGTGATAGACCATATCATTAATAGGAGTCTAATCAGTGATAGTCTGTCATTGATAGATTTTACTATATCTTCAATTTTTTAAAAATATTGCTATACAATTAATTATTTTCCTTAAAAGTGTTACCCAATATAATTATCCTAAAAACTTTCAACCCTGTATGAAAATGATTTAATGCAAATCCAGATGAAATTCGAATATTTAAAGATAATTAATGCACTGTTTTAGTCATAGTTTTTGCCTAATTTTAACTTAGTCTACAAATTAAAGGGAGTTTGAATACTCATCTTTGCCTTTTGAATTTGTCTAGTTGTTGACAACTTATGATCCGTTTTATCTTAAAGAAACTCAACCTACAAAATGGTGCATTTTTTTTAATCAATTATCTATAGGTTTTATAATTTTTAATATTATACTAGAGAAATATGCAATTAATTTTATCTCAAAATTAATTAACAACGATAAAAGTAACCAGTCTATCATATGATATTGTAAAACCTATCATCTTTCTACTGTAGGATTTTATTTTTCTCAAACGAATACTCCGAAACATTTTCAAGTTAAAAAGAATTTGTAGAAATTTTACTTTAATTTGTTTTTGTCTTTTGACTCTATTTTTCTTTGACATAAATTTTCAAAACGTTTTTTGACATCACCAAAAGCTAACATATCTTACTCGCACAATCTTTTATTCTACTTTCAATATGATAAATTGAGATAATGACATGACACTAAAATAAACATATGGTAAGATTCTTTAAATATTTTAAACAAACCTACCTAATCATTCCTTAAAAAGAAATAAAAGGAACCTGCCTGATAAAACATGCAACGCATGAAAAAAAAAAAAAAAAAACTGATAAGTAAAAAATTTTAATTAAACATTTAGAAATTAAAAGGAATCAATTCAAAATTAAGTAAATTTAAGTAATTCCTTAAGGAAAATTAGTTAAATTTATTTAGAGAGGAACAAATTAATGATATGAATTTGACTATTTAATTTAACAGGGCCCAGGTTGTCGGTTGGCCACCGGTAAAGTCGTTGAGGAGGAATATCATAGGACCGAAGAAGAGTAAATTAGAAGAGACAGAGAAGGGCGCCGCCATAAGCGGCGGTAGCTGCAGCGTCGGTGCGGCGGCGGCGTTTATTAAAGTCAGCATGGACGGCGCACCGTACTTACGCAAAGTGGACTTGAAGATGTACGGAAGCTACCAAGAGCTTTCCGATGCCTTAAGCAACATGTTTGGCTCTTTCACCACAGGTAATTTCAAAATTACCCTTCTAACCTCTATCTGTGATATTCGGTCGATCGAAGTCGATTTTTAAAAGAAAATAATACATGGATGTGAATCAATTGTTTCCTATATATATATGTATTTTGGTCGGTCGGTGATTGCCAACTTCTTGCTTCACCCGTAAGACCAATGTCGATTTTGATCGGATGGCTCCATTTTTTGGTCTCTATGCTCATCCTTATTCGTCATCATGATGTTCATTTAATTAAATAATAATAATAGTTAATAAATTATAATTTACAAATTTTGATCCATAAGTTTTTAAGTTTGTATGTATTACGTCTCTAAAATTTTAAAATACTTAATAGGTTTCCAATTTTTCTATTTTTTATCTAATATATGTTTTTAAACTTTCAATTTAATCACTATTAAGTTATTAAACTTTAAAATTAATCACTAGAGACACATGTTTTCACTTTTAAAAAGAAATTAGATCTATTTGTGAACAAAATTGGGGGTGAGACTTTTTATTAGACAGAGTATTCAATTTAAAGAAAAAATTAGATCTATTTGTGAACAAAATTGAAGTGAGACTTTTTATTAGACAAAGTATCTAATTTTGTGTTAGATAGATATATTAATTTATTAATAGTTAAAAATTCTATTAGACATTTTTTAGTTTAACAGACCTATTAATCAAACACAACCCTTTTAGTTAAATGAACTTATTCTTAAAAACTGATAAAGAATCAAATTTCACCCAAAACTTGGCCAAAGTTTATAACAAAATTTTTCTTTAATTTTCAATTTCCAAATTTTTTTTTTGGGTTGAAATTTGTAAGATTTAGGAACTTTAAGAATTAATAAATTAAATTAATTATTAAAGTGAGCATAGTTCAGTTAACATATAACATGTATTAAGAATAAAAAAACAAAAAATTAAGGCCTAGTTTTGTGACTTGTTTTTTGTTTTCGTTTTTGAAAATTAATCCTATAAACACTACTTCTACTCTAAATTTATTCTTTTTTAATCTATTTTTTACCAATGGTTTAAAAAACTAATTGAAAATTTAAAAACTAAAAAAAAAAAACTTTTAAAAACTTGTTTTTGTTTTTTGAATTTGGCAAAGAGTTCAACTGTTATACTTTTGAGAGATGCAAATAAATATAAGAAATGTGAGAAATATGAGAAATATGCTTAACTTTCAAAAAAAAAAATTAAAAAATAAAATGATTATTAAACGAGCCCAAATAATTACCGAATAATGTCATATGTTTAGCCAATAATAAAAAACACTAAGTTAGATGGGGTTGAAAATTGAAATATCAGGAAACTGTGGGCCACAAAAGATGAGGGATTACATGAATGAAAGCAAATTAATAGATGTCCTAAATGGATCTGATTATGTTCCTACTTATGAAGACAAAGATGGAGATTGGATGCTTATTGGAGATGTGCCATGGGAGTAA

mRNA sequence

ATGGGAAGCTTAATTTACTTTGAAGAGACGGAGCTCCGCCTTGGACTTCCCGGCGGGGACGGAAGAGGCGACGGGGAAGCCGTGAAGAAAAGAGGTTTCACTGAAACTGTGGATTTGAAGCTGAATCTTGTGACCGATTCTGACGAAGGCAACAAAACGACGGAGAAAAATGTCGCTTTGAGCTCCGCCGGTAAAGATCTTCCCAAGCCTCCTCCGGCCAAGGCCCAGGTTGTCGGTTGGCCACCGGTAAAGTCGTTGAGGAGGAATATCATAGGACCGAAGAAGAGTAAATTAGAAGAGACAGAGAAGGGCGCCGCCATAAGCGGCGGTAGCTGCAGCGTCGGTGCGGCGGCGGCGTTTATTAAAGTCAGCATGGACGGCGCACCGTACTTACGCAAAGTGGACTTGAAGATGTACGGAAGCTACCAAGAGCTTTCCGATGCCTTAAGCAACATGTTTGGCTCTTTCACCACAGGAAACTGTGGGCCACAAAAGATGAGGGATTACATGAATGAAAGCAAATTAATAGATGTCCTAAATGGATCTGATTATGTTCCTACTTATGAAGACAAAGATGGAGATTGGATGCTTATTGGAGATGTGCCATGGGAGTAA

Coding sequence (CDS)

ATGGGAAGCTTAATTTACTTTGAAGAGACGGAGCTCCGCCTTGGACTTCCCGGCGGGGACGGAAGAGGCGACGGGGAAGCCGTGAAGAAAAGAGGTTTCACTGAAACTGTGGATTTGAAGCTGAATCTTGTGACCGATTCTGACGAAGGCAACAAAACGACGGAGAAAAATGTCGCTTTGAGCTCCGCCGGTAAAGATCTTCCCAAGCCTCCTCCGGCCAAGGCCCAGGTTGTCGGTTGGCCACCGGTAAAGTCGTTGAGGAGGAATATCATAGGACCGAAGAAGAGTAAATTAGAAGAGACAGAGAAGGGCGCCGCCATAAGCGGCGGTAGCTGCAGCGTCGGTGCGGCGGCGGCGTTTATTAAAGTCAGCATGGACGGCGCACCGTACTTACGCAAAGTGGACTTGAAGATGTACGGAAGCTACCAAGAGCTTTCCGATGCCTTAAGCAACATGTTTGGCTCTTTCACCACAGGAAACTGTGGGCCACAAAAGATGAGGGATTACATGAATGAAAGCAAATTAATAGATGTCCTAAATGGATCTGATTATGTTCCTACTTATGAAGACAAAGATGGAGATTGGATGCTTATTGGAGATGTGCCATGGGAGTAA

Protein sequence

MGSLIYFEETELRLGLPGGDGRGDGEAVKKRGFTETVDLKLNLVTDSDEGNKTTEKNVALSSAGKDLPKPPPAKAQVVGWPPVKSLRRNIIGPKKSKLEETEKGAAISGGSCSVGAAAAFIKVSMDGAPYLRKVDLKMYGSYQELSDALSNMFGSFTTGNCGPQKMRDYMNESKLIDVLNGSDYVPTYEDKDGDWMLIGDVPWE
Homology
[Close]
BLAST of Cla002975 vs. Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=1 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.4e-61
Identity = 126/210 (60.00%), Postives = 152/210 (72.38%), Query Frame = 1 

Query: 4   LIYFEETELRLGLPGGDGRGD--GEAVKKRGFTETVDLKLNLV-TDSDEGNKTTEKNVAL 63
           +I FE TELRLGLPGG+  G+  G+   KRGF+ETVDLKLNL  T  D  +K   +N+  
Sbjct: 1   MINFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENM-- 60

Query: 64  SSAGKDLPKPPPAKAQVVGWPPVKSLRRNIIGPKK----SKLEETEKGAAISGGSCSVGA 123
               K+    PPAKAQVVGWPPV+S R+N++  +K       E  +K +  SG + S  A
Sbjct: 61  ----KEKVVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASA 120

Query: 124 AA--AFIKVSMDGAPYLRKVDLKMYGSYQELSDALSNMFGSFTTGNCGPQKMRDYMNESK 183
            A  A++KVSMDGAPYLRK+DLK+Y +YQ+LS+ALS MF SFT GN GPQ M+D+MNESK
Sbjct: 121 CATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESK 180

Query: 184 LIDVLNGSDYVPTYEDKDGDWMLIGDVPWE 205
           LID+LNGSDYVPTYEDKDGDWML+GDVPWE
Sbjct: 181 LIDLLNGSDYVPTYEDKDGDWMLVGDVPWE 204

[Close]
BLAST of Cla002975 vs. Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.9e-56
Identity = 122/220 (55.45%), Postives = 143/220 (65.00%), Query Frame = 1 

Query: 7   FEETELRLGLPGGDGRGDGEAVKKRGFTET-----------VDLKLNL-----------V 66
           FEETELRLGLPG  G  +   ++KRGF+ET           VDL LNL            
Sbjct: 3   FEETELRLGLPGNGGTEE-VLIRKRGFSETETGHEDESATTVDLMLNLSSKEAATTAAAA 62

Query: 67  TDSDEGNKTTEKNVALSSAGKDLPKPPPAKAQVVGWPPVKSLRRNIIGPKKSKLEETEKG 126
            D  + +KT  K   L  A    P  PPAK QVVGWPPV+S R+N++  +KS  EE+EK 
Sbjct: 63  ADPTDKHKTLPKEKTLLPAD---PAKPPAKTQVVGWPPVRSFRKNMLAVQKSVGEESEKN 122

Query: 127 AAISGGSCSVGAAAAFIKVSMDGAPYLRKVDLKMYGSYQELSDALSNMFGSFTTGNCGPQ 186
           ++ +         A+F+KVSMDGAPYLRKVDLKMY SY+ELSD+L  MF SFT GNC  Q
Sbjct: 123 SSPN---------ASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQ 182

Query: 187 KMRDYMNESKLIDVLNGSDYVPTYEDKDGDWMLIGDVPWE 205
            M+D+MNESKL D+LN SDYVPTYEDKDGDWML+GDVPWE
Sbjct: 183 GMKDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWE 209

[Close]
BLAST of Cla002975 vs. Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.3e-54
Identity = 115/211 (54.50%), Postives = 140/211 (66.35%), Query Frame = 1 

Query: 1   MGSLIYFEETELRLGLPGGDGRGDGEAVK----KRGFTETVDLKLNLVTDSDEGNKTTEK 60
           +G L+  + TEL LGLPGG    +  A      KRGF+ETVDL LNL   S++      K
Sbjct: 2   IGQLMNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNL--QSNKEGSVDLK 61

Query: 61  NVALSSAGKDL---PKPPPAKAQVVGWPPVKSLRRNIIGPKKSKLEETEKGAAISGGSCS 120
           NV+     K     P  PPAKAQVVGWPPV++ R+N++  +K+     E  +  +G    
Sbjct: 62  NVSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGG 121

Query: 121 VGAAAAFIKVSMDGAPYLRKVDLKMYGSYQELSDALSNMFGSFTTGNCGPQKMRDYMNES 180
             A A  +KVSMDGAPYLRKVDLKMY SYQ+LSDAL+ MF SFT GN G Q M D+MNES
Sbjct: 122 GAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNES 181

Query: 181 KLIDVLNGSDYVPTYEDKDGDWMLIGDVPWE 205
           KL+++LN S+YVP+YEDKDGDWML+GDVPWE
Sbjct: 182 KLMNLLNSSEYVPSYEDKDGDWMLVGDVPWE 210

[Close]
BLAST of Cla002975 vs. Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 5.2e-54
Identity = 125/248 (50.40%), Postives = 143/248 (57.66%), Query Frame = 1 

Query: 1   MGSLIYFEETELRLGLPGGDGRGDGEAVK------KRGFTETVDLKLNL------VTDSD 60
           M + + FE TELRLGLPGG G GD  A        KRGF ET+DLKL L      V D D
Sbjct: 1   MAADLAFEATELRLGLPGGGGDGDAAAAAARSSSGKRGFAETIDLKLKLEPAAAAVDDDD 60

Query: 61  EGNKTT----EKNVALSSAGKDLPKPPPA----------------------------KAQ 120
           +  +      EK V +  A  D   PP A                            KAQ
Sbjct: 61  DKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPKAQ 120

Query: 121 VVGWPPVKSLRRNIIGPKKSKLEETEKGAAISGGSCSVGAAAAFIKVSMDGAPYLRKVDL 180
           VVGWPPV+S R+NI+  +  K ++   G     G+ +  AAAAF+KVSMDGAPYLRKVDL
Sbjct: 121 VVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGA--AAAAFVKVSMDGAPYLRKVDL 180

Query: 181 KMYGSYQELSDALSNMFGSFTTGNCGPQKMRDYMNESKLIDVLNGSDYVPTYEDKDGDWM 205
           KMY SY ELS AL  MF SFT GNCG   +   MNESK+ D+LNGS+YVPTYEDKDGDWM
Sbjct: 181 KMYKSYLELSKALEKMFSSFTIGNCGSHGVNG-MNESKIADLLNGSEYVPTYEDKDGDWM 240

[Close]
BLAST of Cla002975 vs. Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 1.5e-53
Identity = 114/205 (55.61%), Postives = 141/205 (68.78%), Query Frame = 1 

Query: 8   EETELRLGLPGGDGRGDGEAVK----KRGFTETVDLKLNLVTDSDEGNKTTEKNVALSSA 67
           +ETEL LGLPGG    +  A      KRGF+ETVDLKLNL     + NK    ++  + A
Sbjct: 4   KETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNL-----QSNKQGHVDLNTNGA 63

Query: 68  GKDL-----PKPPPAKAQVVGWPPVKSLRRNIIGPKKSKLEETEKGAAISGGSCSVGAAA 127
            K+      P  PPAKAQVVGWPPV++ R+N++  +KS   E E+  +  GG+       
Sbjct: 64  PKEKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSG--EAEEAMSSGGGT------V 123

Query: 128 AFIKVSMDGAPYLRKVDLKMYGSYQELSDALSNMFGSFTTGNCGPQKMRDYMNESKLIDV 187
           AF+KVSMDGAPYLRKVDLKMY SY++LSDAL+ MF SFT G+ G Q M D+MNESK++D+
Sbjct: 124 AFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDL 183

Query: 188 LNGSDYVPTYEDKDGDWMLIGDVPW 204
           LN S+YVP+YEDKDGDWML+GDVPW
Sbjct: 184 LNSSEYVPSYEDKDGDWMLVGDVPW 195

[Close]
BLAST of Cla002975 vs. TrEMBL
Match: A0A0A0M3H6_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_1G690240 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.5e-95
Identity = 175/205 (85.37%), Postives = 185/205 (90.24%), Query Frame = 1 

Query: 1   MGSLIYFEETELRLGLPGGDGRGDGEAVKKRGFTETVDLKLNLVTDSDEGNKTTEKNVAL 60
           MGSL+ FEETELRLGLPGGDGR DG+AVKKRGFTETVDLKLN+VTDS++GNKTT+KNV  
Sbjct: 1   MGSLLGFEETELRLGLPGGDGRNDGDAVKKRGFTETVDLKLNIVTDSNQGNKTTDKNVVS 60

Query: 61  SSAGKDLPKPPPAKAQVVGWPPVKSLRRNIIG-PKKSKLEETEKGAAISGGSCSVGAAAA 120
           S   KDLPKPPPAKAQVVGWPPVKSLRRNI+G PKK+KLEETEK A ISGG CSVG AAA
Sbjct: 61  SFVNKDLPKPPPAKAQVVGWPPVKSLRRNIVGPPKKNKLEETEKNAVISGGGCSVG-AAA 120

Query: 121 FIKVSMDGAPYLRKVDLKMYGSYQELSDALSNMFGSFTTGNCGPQKMRDYMNESKLIDVL 180
           FIKVSMDGAPYLRKVDLKMYGSYQELSDAL  MF SFT G CG QKMRDYMNE KLIDV 
Sbjct: 121 FIKVSMDGAPYLRKVDLKMYGSYQELSDALRKMFASFTAGQCGAQKMRDYMNERKLIDVS 180

Query: 181 NGSDYVPTYEDKDGDWMLIGDVPWE 205
           NGSDYVPTYEDKDGDWML+GDVPW+
Sbjct: 181 NGSDYVPTYEDKDGDWMLVGDVPWD 204

[Close]
BLAST of Cla002975 vs. TrEMBL
Match: B9SZ69_RICCO (Auxin-responsive protein OS=Ricinus communis GN=RCOM_0484470 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 5.4e-66
Identity = 133/213 (62.44%), Postives = 157/213 (73.71%), Query Frame = 1 

Query: 4   LIYFEETELRLGLPGGDGRGDGEAVK---KRGFTETVDLKLNLVT------DSDEGNKTT 63
           +I FEETELRLGLPGG    D E  K   KRGF+ETVDLKLNL T      D   G +T 
Sbjct: 14  MINFEETELRLGLPGGSNVNDSEFAKVNGKRGFSETVDLKLNLSTKEPSGKDVIVGEETM 73

Query: 64  EKNVALSSAGKDLPKPPPAKAQVVGWPPVKSLRRNIIGPKKSKLEETEKGAAISG---GS 123
           ++   + S+  D P  PPAKAQVVGWPP++S R+N++  +K+  +E EKG A S     +
Sbjct: 74  KEKATVPSSSND-PAKPPAKAQVVGWPPIRSFRKNVMAVQKNSTDEGEKGTATSAPAAAA 133

Query: 124 CSVGAAAAFIKVSMDGAPYLRKVDLKMYGSYQELSDALSNMFGSFTTGNCGPQKMRDYMN 183
            S   +AAF+KVSMDGAPYLRKVDLK+Y SYQELSDAL  MF SFT GNCG Q M+D+MN
Sbjct: 134 TSGSTSAAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMN 193

Query: 184 ESKLIDVLNGSDYVPTYEDKDGDWMLIGDVPWE 205
           ESKLID+LNGS+YVPTYEDKDGDWML+GDVPWE
Sbjct: 194 ESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWE 225

[Close]
BLAST of Cla002975 vs. TrEMBL
Match: A0A061DP25_THECC (Auxin-responsive protein (Fragment) OS=Theobroma cacao GN=TCM_004212 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.6e-65
Identity = 128/198 (64.65%), Postives = 147/198 (74.24%), Query Frame = 1 

Query: 7   FEETELRLGLPGGDGRGDGEAVKKRGFTETVDLKLNLVTDSDEGNKTTEKNVALSSAGKD 66
           FEETELRLGLPG    G+GE  +KRGF+ETVDLKLNL +    G    EK   L     D
Sbjct: 73  FEETELRLGLPGNIRAGEGEVARKRGFSETVDLKLNLSSKESSGVDPNEKEKNLLPCATD 132

Query: 67  LPKPPPAKAQVVGWPPVKSLRRNIIGPKKSKLEETEKGAAISGGSCSVGAAAAFIKVSMD 126
            P  PPAKAQVVGWPPV+S R+N+   +KS  EE+EKG A           AAF+KVSMD
Sbjct: 133 -PAKPPAKAQVVGWPPVRSFRKNMFATQKSSSEESEKGGA---------GNAAFVKVSMD 192

Query: 127 GAPYLRKVDLKMYGSYQELSDALSNMFGSFTTGNCGPQKMRDYMNESKLIDVLNGSDYVP 186
           GAPYLRKVDL+MY +Y ELSDAL+ MF SFT GNCG Q ++D+MNESKL+D+LNGSDYVP
Sbjct: 193 GAPYLRKVDLRMYKTYLELSDALAKMFSSFTIGNCGSQGVKDFMNESKLMDLLNGSDYVP 252

Query: 187 TYEDKDGDWMLIGDVPWE 205
           TYEDKDGDWML+GDVPWE
Sbjct: 253 TYEDKDGDWMLVGDVPWE 260

[Close]
BLAST of Cla002975 vs. TrEMBL
Match: A0A061F988_THECC (Auxin-responsive protein OS=Theobroma cacao GN=TCM_026343 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 7.8e-65
Identity = 138/210 (65.71%), Postives = 159/210 (75.71%), Query Frame = 1 

Query: 3   SLIYFEETELRLGLPGGDGRGDGEAVK---KRGFTETVDLKLNLVTD----SDEGNKTTE 62
           S+I FEETELRLGLPGG+G  DGE  K   KRGF+ETVDLKLNL T     +DE  K  +
Sbjct: 13  SMINFEETELRLGLPGGNGN-DGEMTKNNGKRGFSETVDLKLNLSTAKEAVADEAEKVKK 72

Query: 63  KN-VALSSAGKDLPKPPPAKAQVVGWPPVKSLRRNIIGPKKSKLEETEKGAAISGGSCSV 122
           K+ VA  SA    P  PPAKAQVVGWPPV+S R+NI+  +K+   + E   A S  + + 
Sbjct: 73  KSTVAPRSAD---PAKPPAKAQVVGWPPVRSFRKNIMAVQKNS-SDVEGEKAGSSNTTTA 132

Query: 123 GAAAAFIKVSMDGAPYLRKVDLKMYGSYQELSDALSNMFGSFTTGNCGPQKMRDYMNESK 182
             AAAF+KVSMDGAPYLRKVDLK+Y SYQELSDAL  MF SFT GNCG Q M+D+MNESK
Sbjct: 133 TVAAAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESK 192

Query: 183 LIDVLNGSDYVPTYEDKDGDWMLIGDVPWE 205
           LID+LNGS+YVPTYEDKDGDWML+GDVPWE
Sbjct: 193 LIDLLNGSEYVPTYEDKDGDWMLVGDVPWE 217

[Close]
BLAST of Cla002975 vs. TrEMBL
Match: B9I5F9_POPTR (Auxin-responsive protein OS=Populus trichocarpa GN=POPTR_0013s03870g PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 7.8e-65
Identity = 139/211 (65.88%), Postives = 155/211 (73.46%), Query Frame = 1 

Query: 3   SLIYFEETELRLGLPGGDGRG-DGEAVK---KRGFTETVDLKLNLVTDS-----DEGNKT 62
           S+I FEETELRLGLPGG G G DGE  K   KRGF+ETVDLKLNL T       DE    
Sbjct: 13  SMINFEETELRLGLPGGIGNGNDGEVAKSNGKRGFSETVDLKLNLSTKESGKGGDEEKVM 72

Query: 63  TEKNVALSSAGKDLPKPPPAKAQVVGWPPVKSLRRNIIGPKKSKLEETEKGAAISGGSCS 122
            EK VA   A  D P  PPAKAQVVGWPP++S R+N++  +K+  +  EK    SG S  
Sbjct: 73  KEKTVA-PPASTD-PAKPPAKAQVVGWPPIRSFRKNVMAVQKNSNDNGEK----SGSS-- 132

Query: 123 VGAAAAFIKVSMDGAPYLRKVDLKMYGSYQELSDALSNMFGSFTTGNCGPQKMRDYMNES 182
            G   AF+KVSMDGAPYLRKVDLK+Y SYQELSDAL  MF SFT GNCG Q M+D+MNES
Sbjct: 133 -GTGVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNES 192

Query: 183 KLIDVLNGSDYVPTYEDKDGDWMLIGDVPWE 205
           KLID+LNGSDYVPTYEDKDGDWML+GDVPWE
Sbjct: 193 KLIDLLNGSDYVPTYEDKDGDWMLVGDVPWE 214

[Close]
BLAST of Cla002975 vs. NCBI nr
Match: gi|449449553|ref|XP_004142529.1| (PREDICTED: auxin-responsive protein IAA16 [Cucumis sativus])

HSP 1 Score: 356.3 bits (913), Expect = 3.6e-95
Identity = 175/205 (85.37%), Postives = 185/205 (90.24%), Query Frame = 1 

Query: 1   MGSLIYFEETELRLGLPGGDGRGDGEAVKKRGFTETVDLKLNLVTDSDEGNKTTEKNVAL 60
           MGSL+ FEETELRLGLPGGDGR DG+AVKKRGFTETVDLKLN+VTDS++GNKTT+KNV  
Sbjct: 1   MGSLLGFEETELRLGLPGGDGRNDGDAVKKRGFTETVDLKLNIVTDSNQGNKTTDKNVVS 60

Query: 61  SSAGKDLPKPPPAKAQVVGWPPVKSLRRNIIG-PKKSKLEETEKGAAISGGSCSVGAAAA 120
           S   KDLPKPPPAKAQVVGWPPVKSLRRNI+G PKK+KLEETEK A ISGG CSVG AAA
Sbjct: 61  SFVNKDLPKPPPAKAQVVGWPPVKSLRRNIVGPPKKNKLEETEKNAVISGGGCSVG-AAA 120

Query: 121 FIKVSMDGAPYLRKVDLKMYGSYQELSDALSNMFGSFTTGNCGPQKMRDYMNESKLIDVL 180
           FIKVSMDGAPYLRKVDLKMYGSYQELSDAL  MF SFT G CG QKMRDYMNE KLIDV 
Sbjct: 121 FIKVSMDGAPYLRKVDLKMYGSYQELSDALRKMFASFTAGQCGAQKMRDYMNERKLIDVS 180

Query: 181 NGSDYVPTYEDKDGDWMLIGDVPWE 205
           NGSDYVPTYEDKDGDWML+GDVPW+
Sbjct: 181 NGSDYVPTYEDKDGDWMLVGDVPWD 204

[Close]
BLAST of Cla002975 vs. NCBI nr
Match: gi|659125487|ref|XP_008462707.1| (PREDICTED: auxin-induced protein AUX28-like isoform X2 [Cucumis melo])

HSP 1 Score: 334.3 bits (856), Expect = 1.5e-88
Identity = 163/204 (79.90%), Postives = 179/204 (87.75%), Query Frame = 1 

Query: 1   MGSLIYFEETELRLGLPGGDGRGDGEAVKKRGFTETVDLKLNLVTDSDEGNKTTEKNVAL 60
           MGSL+ F+ETELRLGLPG +GR DG+AVKKRGFTETVDLKL++ TDSD+GNKT +KNV  
Sbjct: 1   MGSLLDFKETELRLGLPGWEGRNDGDAVKKRGFTETVDLKLHIATDSDQGNKTIDKNVVS 60

Query: 61  SSAGKDLPKPPPAKAQVVGWPPVKSLRRNIIGPKKSKLEETEKGAAISGGSCSVGAAAAF 120
           S   KDLPKPPPAK QV+GWPPVKSLRRNIIGPKK+KLEET+K A    G CSVG A AF
Sbjct: 61  SFVNKDLPKPPPAKTQVIGWPPVKSLRRNIIGPKKNKLEETKKSAV---GDCSVG-AVAF 120

Query: 121 IKVSMDGAPYLRKVDLKMYGSYQELSDALSNMFGSFTTGNCGPQKMRDYMNESKLIDVLN 180
           IKVSM+GAPYLRKVDLKMY SYQ+L DALS MFGSFTTGNCG QKM+DYMNE KL DVLN
Sbjct: 121 IKVSMEGAPYLRKVDLKMYESYQQLFDALSKMFGSFTTGNCGAQKMKDYMNERKLKDVLN 180

Query: 181 GSDYVPTYEDKDGDWMLIGDVPWE 205
           GSDYVPTYEDKDGDWML+GDVPW+
Sbjct: 181 GSDYVPTYEDKDGDWMLVGDVPWD 200

[Close]
BLAST of Cla002975 vs. NCBI nr
Match: gi|659125485|ref|XP_008462706.1| (PREDICTED: auxin-responsive protein IAA16-like isoform X1 [Cucumis melo])

HSP 1 Score: 334.3 bits (856), Expect = 1.5e-88
Identity = 163/204 (79.90%), Postives = 179/204 (87.75%), Query Frame = 1 

Query: 1   MGSLIYFEETELRLGLPGGDGRGDGEAVKKRGFTETVDLKLNLVTDSDEGNKTTEKNVAL 60
           MGSL+ F+ETELRLGLPG +GR DG+AVKKRGFTETVDLKL++ TDSD+GNKT +KNV  
Sbjct: 1   MGSLLDFKETELRLGLPGWEGRNDGDAVKKRGFTETVDLKLHIATDSDQGNKTIDKNVVS 60

Query: 61  SSAGKDLPKPPPAKAQVVGWPPVKSLRRNIIGPKKSKLEETEKGAAISGGSCSVGAAAAF 120
           S   KDLPKPPPAK QV+GWPPVKSLRRNIIGPKK+KLEET+K A    G CSVG A AF
Sbjct: 61  SFVNKDLPKPPPAKTQVIGWPPVKSLRRNIIGPKKNKLEETKKSAV---GDCSVG-AVAF 120

Query: 121 IKVSMDGAPYLRKVDLKMYGSYQELSDALSNMFGSFTTGNCGPQKMRDYMNESKLIDVLN 180
           IKVSM+GAPYLRKVDLKMY SYQ+L DALS MFGSFTTGNCG QKM+DYMNE KL DVLN
Sbjct: 121 IKVSMEGAPYLRKVDLKMYESYQQLFDALSKMFGSFTTGNCGAQKMKDYMNERKLKDVLN 180

Query: 181 GSDYVPTYEDKDGDWMLIGDVPWE 205
           GSDYVPTYEDKDGDWML+GDVPW+
Sbjct: 181 GSDYVPTYEDKDGDWMLVGDVPWD 200

[Close]
BLAST of Cla002975 vs. NCBI nr
Match: gi|255580939|ref|XP_002531288.1| (PREDICTED: auxin-responsive protein IAA16 [Ricinus communis])

HSP 1 Score: 258.8 bits (660), Expect = 7.7e-66
Identity = 133/213 (62.44%), Postives = 157/213 (73.71%), Query Frame = 1 

Query: 4   LIYFEETELRLGLPGGDGRGDGEAVK---KRGFTETVDLKLNLVT------DSDEGNKTT 63
           +I FEETELRLGLPGG    D E  K   KRGF+ETVDLKLNL T      D   G +T 
Sbjct: 14  MINFEETELRLGLPGGSNVNDSEFAKVNGKRGFSETVDLKLNLSTKEPSGKDVIVGEETM 73

Query: 64  EKNVALSSAGKDLPKPPPAKAQVVGWPPVKSLRRNIIGPKKSKLEETEKGAAISG---GS 123
           ++   + S+  D P  PPAKAQVVGWPP++S R+N++  +K+  +E EKG A S     +
Sbjct: 74  KEKATVPSSSND-PAKPPAKAQVVGWPPIRSFRKNVMAVQKNSTDEGEKGTATSAPAAAA 133

Query: 124 CSVGAAAAFIKVSMDGAPYLRKVDLKMYGSYQELSDALSNMFGSFTTGNCGPQKMRDYMN 183
            S   +AAF+KVSMDGAPYLRKVDLK+Y SYQELSDAL  MF SFT GNCG Q M+D+MN
Sbjct: 134 TSGSTSAAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMN 193

Query: 184 ESKLIDVLNGSDYVPTYEDKDGDWMLIGDVPWE 205
           ESKLID+LNGS+YVPTYEDKDGDWML+GDVPWE
Sbjct: 194 ESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWE 225

[Close]
BLAST of Cla002975 vs. NCBI nr
Match: gi|720058179|ref|XP_010274203.1| (PREDICTED: auxin-responsive protein IAA16-like [Nelumbo nucifera])

HSP 1 Score: 256.1 bits (653), Expect = 5.0e-65
Identity = 135/212 (63.68%), Postives = 152/212 (71.70%), Query Frame = 1 

Query: 7   FEETELRLGLPGGDGRGDGEAVK--------KRGFTETVDLKLNLVTD------SDEGNK 66
           FEETELRLGLPGG G GDG+           KRGF ETVDLKLNL T       +++ N 
Sbjct: 22  FEETELRLGLPGGGGGGDGDTTPSATKINGAKRGFAETVDLKLNLPTKESVLDPAEKKNS 81

Query: 67  TTEKNVALSSAGKDLPKPPPAKAQVVGWPPVKSLRRNIIGPKKSKLEETEKGAAISGGSC 126
             EKN+   S     P  PPAKAQVVGWPPV+S R+NI+   KS  EE EK         
Sbjct: 82  PKEKNLLPCSND---PAKPPAKAQVVGWPPVRSFRKNILSVHKSSTEEGEK--------- 141

Query: 127 SVGAAAAFIKVSMDGAPYLRKVDLKMYGSYQELSDALSNMFGSFTTGNCGPQKMRDYMNE 186
            V ++AAF+KVSMDGAPYLRKVDLKMY SYQELSDAL  MF SFT GNCGPQ M+D+MNE
Sbjct: 142 -VSSSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGPQGMKDFMNE 201

Query: 187 SKLIDVLNGSDYVPTYEDKDGDWMLIGDVPWE 205
           SKL+D+LNGS+YVPTYEDKDGDWML+GDVPWE
Sbjct: 202 SKLMDLLNGSEYVPTYEDKDGDWMLVGDVPWE 220

The following BLAST results are available for this feature:
BLAST of Cla002975 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IAA16_ARATH3.4e-6160.00Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=1 SV=1[more]
AUX28_SOYBN1.9e-5655.45Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1[more]
IAA7_ARATH2.3e-5454.50Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1[more]
IAA30_ORYSJ5.2e-5450.40Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=... [more]
IAA14_ARATH1.5e-5355.61Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2[more]
BLAST of Cla002975 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M3H6_CUCSA2.5e-9585.37Auxin-responsive protein OS=Cucumis sativus GN=Csa_1G690240 PE=3 SV=1[more]
B9SZ69_RICCO5.4e-6662.44Auxin-responsive protein OS=Ricinus communis GN=RCOM_0484470 PE=3 SV=1[more]
A0A061DP25_THECC4.6e-6564.65Auxin-responsive protein (Fragment) OS=Theobroma cacao GN=TCM_004212 PE=3 SV=1[more]
A0A061F988_THECC7.8e-6565.71Auxin-responsive protein OS=Theobroma cacao GN=TCM_026343 PE=3 SV=1[more]
B9I5F9_POPTR7.8e-6565.88Auxin-responsive protein OS=Populus trichocarpa GN=POPTR_0013s03870g PE=3 SV=1[more]
BLAST of Cla002975 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449449553|ref|XP_004142529.1|3.6e-9585.37PREDICTED: auxin-responsive protein IAA16 [Cucumis sativus][more]
gi|659125487|ref|XP_008462707.1|1.5e-8879.90PREDICTED: auxin-induced protein AUX28-like isoform X2 [Cucumis melo][more]
gi|659125485|ref|XP_008462706.1|1.5e-8879.90PREDICTED: auxin-responsive protein IAA16-like isoform X1 [Cucumis melo][more]
gi|255580939|ref|XP_002531288.1|7.7e-6662.44PREDICTED: auxin-responsive protein IAA16 [Ricinus communis][more]
gi|720058179|ref|XP_010274203.1|5.0e-6563.68PREDICTED: auxin-responsive protein IAA16-like [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom
IPR003311AUX_IAA
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU06766watermelon EST collection version 2.0transcribed_cluster
WMU09596watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU15547watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU16658watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU53545watermelon EST collection version 2.0transcribed_cluster
WMU57736watermelon EST collection version 2.0transcribed_cluster
WMU60854watermelon EST collection version 2.0transcribed_cluster
WMU76104watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla002975Cla002975.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU15547WMU15547transcribed_cluster
WMU16658WMU16658transcribed_cluster
WMU57736WMU57736transcribed_cluster
WMU76104WMU76104transcribed_cluster
WMU06766WMU06766transcribed_cluster
WMU09596WMU09596transcribed_cluster
WMU60854WMU60854transcribed_cluster
WMU53545WMU53545transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainPROFILEPS51745PB1coord: 118..204
score: 20
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 5..204
score: 6.4
NoneNo IPR availablePANTHERPTHR31734:SF28AUXIN-RESPONSIVE PROTEIN IAA16coord: 5..204
score: 6.4
NoneNo IPR availableunknownSSF54277CAD & PB1 domainscoord: 118..204
score: 2.16