Cla002969 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGATGTAACAGCAAAGGCAGCCATGGTAGAGATGGAGAGAAAAATAGATCTCCTAATGAAAGCTGTCGAGGAGCAAGATCACGAGATCGCTGTCTTAAGAGAGCAGATGCAGGCTCGAGAAACTGTCGAGTCAAGCCAAACGCTCGCTGCCAAGGCCAATGACAAAGGAAAAACTCTGTTGTAG ATGGCTGATGTAACAGCAAAGGCAGCCATGGTAGAGATGGAGAGAAAAATAGATCTCCTAATGAAAGCTGTCGAGGAGCAAGATCACGAGATCGCTGTCTTAAGAGAGCAGATGCAGGCTCGAGAAACTGTCGAGTCAAGCCAAACGCTCGCTGCCAAGGCCAATGACAAAGGAAAAACTCTGTTGTAG ATGGCTGATGTAACAGCAAAGGCAGCCATGGTAGAGATGGAGAGAAAAATAGATCTCCTAATGAAAGCTGTCGAGGAGCAAGATCACGAGATCGCTGTCTTAAGAGAGCAGATGCAGGCTCGAGAAACTGTCGAGTCAAGCCAAACGCTCGCTGCCAAGGCCAATGACAAAGGAAAAACTCTGTTGTAG MADVTAKAAMVEMERKIDLLMKAVEEQDHEIAVLREQMQARETVESSQTLAAKANDKGKTLL
BLAST of Cla002969 vs. TrEMBL
Match: E5GCP6_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.4e-12 Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 1
BLAST of Cla002969 vs. TrEMBL
Match: E5GB67_CUCME (Retrotransposon gag protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 4.0e-12 Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 1
BLAST of Cla002969 vs. NCBI nr
Match: gi|307136441|gb|ADN34247.1| (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 79.7 bits (195), Expect = 2.0e-12 Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 1
BLAST of Cla002969 vs. NCBI nr
Match: gi|307135838|gb|ADN33709.1| (retrotransposon gag protein [Cucumis melo subsp. melo]) HSP 1 Score: 78.2 bits (191), Expect = 5.7e-12 Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 1
BLAST of Cla002969 vs. NCBI nr
Match: gi|659118742|ref|XP_008459280.1| (PREDICTED: uncharacterized protein LOC103498458 [Cucumis melo]) HSP 1 Score: 71.2 bits (173), Expect = 7.0e-10 Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 1
BLAST of Cla002969 vs. NCBI nr
Match: gi|659127214|ref|XP_008463585.1| (PREDICTED: uncharacterized protein LOC103501695 [Cucumis melo]) HSP 1 Score: 68.9 bits (167), Expect = 3.5e-09 Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|