Cla002872 (gene) Watermelon (97103) v1

NameCla002872
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPentatricopeptide repeat-containing protein (AHRD V1 *-*- D7KH37_ARALL); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
LocationChr10 : 22401348 .. 22403853 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGCACGTGTATATTGTGGTGGGGAAGGAATAGTACCTCCAACTTTTCAGATCCCTCTCTGTACAATCTTTTTGTGTTCTCTTTCCAGGAATCGAGGGTACAGAGTAAGAACTTCATATGTCTTTGGCAAACTAGAGGTACCATATTCTTGGGAAGGAAATGTAGCTGGTTTTGGAACCACCGCGGCTTTATCTGATAGATGCATATCTTTTGAGAGAAACAACCTTGCAACATGGACGTCCTCTGGGATTTATATTAGTAGTCATGGTCTATCTTCACAAGCCGGTGCTGAGAACAGTGGAGAGGAAGATAAAATGGAAGATGGATTTTCTGAACTTGATGAAACACTTCCAAGCACTAGTCCACTCGAAGATAGTAAGGCAGCTGATGATAGTGAAGAGGAACTAACCTGTGGATCAGAAATCGATGATGACGACGACGTTGATGATGGGACTCAAAATGAACTGGATTTACCAGAGGTAGAAACTGAACTTGCTGAAAAGATATCAACAAAAAGGGCTTCTTCAGAGCTATTCAATGCTATTTTGGGTGCTCCTGGTTTATCTGTTCCTATTGTACTTGATAAGTGGGTCAGTGAAGGAAAAGAAATAAGTCGGGCTGTTGTCTCTCTTGCCATGCTCAATCTTCGTAGACGTCGAATGTTTGGGAAGGCTTTGCAGGTAAGTTTATTTGATGCTACTTTTCAAGCAATGAAATTCGTTTGTGTGGTTTGCGGTTTGTAATTAATCTCATTTCTCTTGGAATTTGTGGAACTCTATGTAAGTCTATGTGATTAGTGGACACTACGGATTTCAGGATGGAAATGTCGATTAATTTTTTAAAGTACAACTATCAATTGTAATATGGTCTAACAAGCACTTGTTAGGCTTGTAATTAGTAAGCCTGAATATGTCAGTCAATTATTAAGATGTTCCATTATCAAATACTGGCATAAAAAATTGCTGAGCTGGCTTATACTTATAGCATTCAAGAAATGGTGCTAGAGCCTTTTTCAAAAGTTTCAGTTGGTTTGATGTCTGGTTGGGCAGCATCCAAACTCCTGGTAGTATATTTGGATCGGCATTCATATATTGTTGGGCTTATAAAGTCATTGGTGGTATGAAAATGCTTGTGCAATTTTTGACACTGAAGAACATTTTAGCTCTTGTATATGTTAATATTTTTCTCTATTTGTTAGACATTCAATCGTCAATTCTTGAACTCATTGCTGCCGTTTCTGTATGGGTTTCACAGTTTTCGGAGTGGTTGGAAGCAAGTGGGCAACTCGATTTTATTGAGAGAGATTATGCTTCTCGCCTTGACTTGATTGCAAAGGTACACGGTCTCTATAAGGCAGAGAGGTACATTGCTAAAATCCCAAAGTCCTTCCAGGGGGAGGTGATATACCGAACTCTTTTGGCTAACTGTGTGATAGCCAACAATGTAAAAAAAGCAGAGGAAGTATTTAACAAAATGAAGGACCTCGGATTCCCACTCACAACATTTGCTTGCAACCAGTTGCTTCTTCTTCACAAGAGGCATGACAAGAGGAAAATGGCCGACGATTTGTTGTTGATGGAGAAAGAAAATATCAAGCCTTCTCTGTTTACTTACAAAATCTTAATAGATGCTAAAGGCCTATCAAATGACATGCTAGGGATGGAACAAGTTGTTGATACAATGAAGGCCGAAGGAGTTGAAATTGATTTTAATGTACTTTCCATATTAGCTAAGCACTATGCTTCAGGTGGGCTTAAAGACGAAGCCAAGGCCATTTTAAAGGAGATGGAAGATGTTTACTCCAAAGGTTCTCAATGGTCTTGCAGAATTTTACTTCCCATTTATGGAGAACTCCAAATGGAAGATGAAGTGAGGAGGCTCTGGGAGATCTGCGAGCCAAATCCTCGTATTGAAGAATGCTTGGCTGCCATTGTTGCTTGGGGAAAGCTGAAGAACGTCCCGGAAGCAGAGAAAATTTTTGATAGAGTTGTAAAAACATGGAAGAAGCTTTCCCCAAAACATTATTCTACCATGTTGAAGGTTTATTCAGACAATAAGATGCTGACAAAGGGCAAGGAACTAGTCAAGCAGATGGCAGACAGCGGTTGCAGCATCGGTCCGTCGACATGGGATGCAATTGTGAAGCTCTATGTGGAAGCTGGGGAGGTAGAAAAAGCAGACTCTTTCTTGGTTAAGGCTGTTCAAAAAAACCGGAAGAAGCCATTGTTTACCTCATACATGGTTATCATGAATCAATATGCAAGAAGGGGGGATGTCCACAATGCAGAGAAAATCTTTCATAATATGAGAATATGGGGTTACGTGGCTCGATTCAGCCAATATCAAAGTCTGATACAGGCATACCTTAATGCGAAGACTCCGGCCTATGGTATGAAAGATCGTATGAAGGCAGATAATGTATTTCCAAACAAAACTTTGGCAGGGAAATTAGCCCAAGTTGATGCTTTCAGGAAGACAGCAGTGTCGGATTTGCTTGACTGA

mRNA sequence

ATGCATGCACGTGTATATTGTGGTGGGGAAGGAATAGTACCTCCAACTTTTCAGATCCCTCTCTGTACAATCTTTTTGTGTTCTCTTTCCAGGAATCGAGGGTACAGAGTAAGAACTTCATATGTCTTTGGCAAACTAGAGGTACCATATTCTTGGGAAGGAAATGTAGCTGGTTTTGGAACCACCGCGGCTTTATCTGATAGATGCATATCTTTTGAGAGAAACAACCTTGCAACATGGACGTCCTCTGGGATTTATATTAGTAGTCATGGTCTATCTTCACAAGCCGGTGCTGAGAACAGTGGAGAGGAAGATAAAATGGAAGATGGATTTTCTGAACTTGATGAAACACTTCCAAGCACTAGTCCACTCGAAGATAGTAAGGCAGCTGATGATAGTGAAGAGGAACTAACCTGTGGATCAGAAATCGATGATGACGACGACGTTGATGATGGGACTCAAAATGAACTGGATTTACCAGAGGTAGAAACTGAACTTGCTGAAAAGATATCAACAAAAAGGGCTTCTTCAGAGCTATTCAATGCTATTTTGGGTGCTCCTGGTTTATCTGTTCCTATTGTACTTGATAAGTGGGTCAGTGAAGGAAAAGAAATAAGTCGGGCTGTTGTCTCTCTTGCCATGCTCAATCTTCGTAGACGTCGAATGTTTGGGAAGGCTTTGCAGCATTCAAGAAATGGTGCTAGAGCCTTTTTCAAAAGTTTCAGTTGGTTTGATGTCTGGTTGGGCAGCATCCAAACTCCTGGTAGTATATTTGGATCGGCATTCATATATTGTTGGGCTTATAAAGTCATTGGTGACATTCAATCGTCAATTCTTGAACTCATTGCTGCCGTTTCTGTATGGGTTTCACAGTTTTCGGAGTGGTTGGAAGCAAGTGGGCAACTCGATTTTATTGAGAGAGATTATGCTTCTCGCCTTGACTTGATTGCAAAGGTACACGGTCTCTATAAGGCAGAGAGGTACATTGCTAAAATCCCAAAGTCCTTCCAGGGGGAGGTGATATACCGAACTCTTTTGGCTAACTGTGTGATAGCCAACAATGTAAAAAAAGCAGAGGAAGTATTTAACAAAATGAAGGACCTCGGATTCCCACTCACAACATTTGCTTGCAACCAGTTGCTTCTTCTTCACAAGAGGCATGACAAGAGGAAAATGGCCGACGATTTGTTGTTGATGGAGAAAGAAAATATCAAGCCTTCTCTGTTTACTTACAAAATCTTAATAGATGCTAAAGGCCTATCAAATGACATGCTAGGGATGGAACAAGTTGTTGATACAATGAAGGCCGAAGGAGTTGAAATTGATTTTAATGTACTTTCCATATTAGCTAAGCACTATGCTTCAGGTGGGCTTAAAGACGAAGCCAAGGCCATTTTAAAGGAGATGGAAGATGTTTACTCCAAAGGTTCTCAATGGTCTTGCAGAATTTTACTTCCCATTTATGGAGAACTCCAAATGGAAGATGAAGTGAGGAGGCTCTGGGAGATCTGCGAGCCAAATCCTCGTATTGAAGAATGCTTGGCTGCCATTGTTGCTTGGGGAAAGCTGAAGAACGTCCCGGAAGCAGAGAAAATTTTTGATAGAGTTGTAAAAACATGGAAGAAGCTTTCCCCAAAACATTATTCTACCATGTTGAAGGTTTATTCAGACAATAAGATGCTGACAAAGGGCAAGGAACTAGTCAAGCAGATGGCAGACAGCGGTTGCAGCATCGGTCCGTCGACATGGGATGCAATTGTGAAGCTCTATGTGGAAGCTGGGGAGGTAGAAAAAGCAGACTCTTTCTTGGTTAAGGCTGTTCAAAAAAACCGGAAGAAGCCATTGTTTACCTCATACATGGTTATCATGAATCAATATGCAAGAAGGGGGGATGTCCACAATGCAGAGAAAATCTTTCATAATATGAGAATATGGGGTTACGTGGCTCGATTCAGCCAATATCAAAGTCTGATACAGGCATACCTTAATGCGAAGACTCCGGCCTATGGTATGAAAGATCGTATGAAGGCAGATAATGTATTTCCAAACAAAACTTTGGCAGGGAAATTAGCCCAAGTTGATGCTTTCAGGAAGACAGCAGTGTCGGATTTGCTTGACTGA

Coding sequence (CDS)

ATGCATGCACGTGTATATTGTGGTGGGGAAGGAATAGTACCTCCAACTTTTCAGATCCCTCTCTGTACAATCTTTTTGTGTTCTCTTTCCAGGAATCGAGGGTACAGAGTAAGAACTTCATATGTCTTTGGCAAACTAGAGGTACCATATTCTTGGGAAGGAAATGTAGCTGGTTTTGGAACCACCGCGGCTTTATCTGATAGATGCATATCTTTTGAGAGAAACAACCTTGCAACATGGACGTCCTCTGGGATTTATATTAGTAGTCATGGTCTATCTTCACAAGCCGGTGCTGAGAACAGTGGAGAGGAAGATAAAATGGAAGATGGATTTTCTGAACTTGATGAAACACTTCCAAGCACTAGTCCACTCGAAGATAGTAAGGCAGCTGATGATAGTGAAGAGGAACTAACCTGTGGATCAGAAATCGATGATGACGACGACGTTGATGATGGGACTCAAAATGAACTGGATTTACCAGAGGTAGAAACTGAACTTGCTGAAAAGATATCAACAAAAAGGGCTTCTTCAGAGCTATTCAATGCTATTTTGGGTGCTCCTGGTTTATCTGTTCCTATTGTACTTGATAAGTGGGTCAGTGAAGGAAAAGAAATAAGTCGGGCTGTTGTCTCTCTTGCCATGCTCAATCTTCGTAGACGTCGAATGTTTGGGAAGGCTTTGCAGCATTCAAGAAATGGTGCTAGAGCCTTTTTCAAAAGTTTCAGTTGGTTTGATGTCTGGTTGGGCAGCATCCAAACTCCTGGTAGTATATTTGGATCGGCATTCATATATTGTTGGGCTTATAAAGTCATTGGTGACATTCAATCGTCAATTCTTGAACTCATTGCTGCCGTTTCTGTATGGGTTTCACAGTTTTCGGAGTGGTTGGAAGCAAGTGGGCAACTCGATTTTATTGAGAGAGATTATGCTTCTCGCCTTGACTTGATTGCAAAGGTACACGGTCTCTATAAGGCAGAGAGGTACATTGCTAAAATCCCAAAGTCCTTCCAGGGGGAGGTGATATACCGAACTCTTTTGGCTAACTGTGTGATAGCCAACAATGTAAAAAAAGCAGAGGAAGTATTTAACAAAATGAAGGACCTCGGATTCCCACTCACAACATTTGCTTGCAACCAGTTGCTTCTTCTTCACAAGAGGCATGACAAGAGGAAAATGGCCGACGATTTGTTGTTGATGGAGAAAGAAAATATCAAGCCTTCTCTGTTTACTTACAAAATCTTAATAGATGCTAAAGGCCTATCAAATGACATGCTAGGGATGGAACAAGTTGTTGATACAATGAAGGCCGAAGGAGTTGAAATTGATTTTAATGTACTTTCCATATTAGCTAAGCACTATGCTTCAGGTGGGCTTAAAGACGAAGCCAAGGCCATTTTAAAGGAGATGGAAGATGTTTACTCCAAAGGTTCTCAATGGTCTTGCAGAATTTTACTTCCCATTTATGGAGAACTCCAAATGGAAGATGAAGTGAGGAGGCTCTGGGAGATCTGCGAGCCAAATCCTCGTATTGAAGAATGCTTGGCTGCCATTGTTGCTTGGGGAAAGCTGAAGAACGTCCCGGAAGCAGAGAAAATTTTTGATAGAGTTGTAAAAACATGGAAGAAGCTTTCCCCAAAACATTATTCTACCATGTTGAAGGTTTATTCAGACAATAAGATGCTGACAAAGGGCAAGGAACTAGTCAAGCAGATGGCAGACAGCGGTTGCAGCATCGGTCCGTCGACATGGGATGCAATTGTGAAGCTCTATGTGGAAGCTGGGGAGGTAGAAAAAGCAGACTCTTTCTTGGTTAAGGCTGTTCAAAAAAACCGGAAGAAGCCATTGTTTACCTCATACATGGTTATCATGAATCAATATGCAAGAAGGGGGGATGTCCACAATGCAGAGAAAATCTTTCATAATATGAGAATATGGGGTTACGTGGCTCGATTCAGCCAATATCAAAGTCTGATACAGGCATACCTTAATGCGAAGACTCCGGCCTATGGTATGAAAGATCGTATGAAGGCAGATAATGTATTTCCAAACAAAACTTTGGCAGGGAAATTAGCCCAAGTTGATGCTTTCAGGAAGACAGCAGTGTCGGATTTGCTTGACTGA

Protein sequence

MHARVYCGGEGIVPPTFQIPLCTIFLCSLSRNRGYRVRTSYVFGKLEVPYSWEGNVAGFGTTAALSDRCISFERNNLATWTSSGIYISSHGLSSQAGAENSGEEDKMEDGFSELDETLPSTSPLEDSKAADDSEEELTCGSEIDDDDDVDDGTQNELDLPEVETELAEKISTKRASSELFNAILGAPGLSVPIVLDKWVSEGKEISRAVVSLAMLNLRRRRMFGKALQHSRNGARAFFKSFSWFDVWLGSIQTPGSIFGSAFIYCWAYKVIGDIQSSILELIAAVSVWVSQFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCVIANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHKRHDKRKMADDLLLMEKENIKPSLFTYKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEMEDVYSKGSQWSCRILLPIYGELQMEDEVRRLWEICEPNPRIEECLAAIVAWGKLKNVPEAEKIFDRVVKTWKKLSPKHYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWDAIVKLYVEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQYARRGDVHNAEKIFHNMRIWGYVARFSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQVDAFRKTAVSDLLD
BLAST of Cla002872 vs. Swiss-Prot
Match: PPR44_ARATH (Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidopsis thaliana GN=At1g15480 PE=2 SV=2)

HSP 1 Score: 529.3 bits (1362), Expect = 6.7e-149
Identity = 255/416 (61.30%), Postives = 332/416 (79.81%), Query Frame = 1

Query: 291 QFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCV 350
           Q +EWL+ + Q +  ERDYA RLDLI+KV G YK E YI  IP+SF+GE++YRTLLAN V
Sbjct: 179 QMTEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHV 238

Query: 351 IANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHKRHDKRKMADDLLLMEKENIKPSLFT 410
             +NV+ AE VFNKMKDLGFPL+TF CNQ+L+L+KR DK+K+AD LLL+EKEN+KP+L T
Sbjct: 239 ATSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKKKIADVLLLLEKENLKPNLNT 298

Query: 411 YKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEME 470
           YKILID KG SND+ GMEQ+V+TMK+EGVE+D    +++A+HYAS GLK++A+ +LKEME
Sbjct: 299 YKILIDTKGSSNDITGMEQIVETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEME 358

Query: 471 DVYSKGSQWSCRILLPIYGELQMEDEVRRLWEICEPNPRIEECLAAIVAWGKLKNVPEAE 530
               + ++  C+ LL +YG LQ EDEVRR+W+ICE NPR  E LAAI+A+GK+  V +AE
Sbjct: 359 GESLEENRHMCKDLLSVYGYLQREDEVRRVWKICEENPRYNEVLAAILAFGKIDKVKDAE 418

Query: 531 KIFDRVVKTWKKLSPKHYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWDAIVKLY 590
            +F++V+K   ++S   YS +L+VY D+KM+++GK+LVKQM+DSGC+IG  TWDA++KLY
Sbjct: 419 AVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLY 478

Query: 591 VEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQYARRGDVHNAEKIFHNMRIWGYVAR 650
           VEAGEVEKA+S L KA+Q  + KPL +S+M +M++Y RRGDVHN EKIF  M+  GY +R
Sbjct: 479 VEAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSR 538

Query: 651 FSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQVDAFRKTAVSDLLD 707
           F  YQ+LIQAY+NAK PAYGMK+RMKADN+FPNK LA +LA+ D F+KT +SDLLD
Sbjct: 539 FWAYQTLIQAYVNAKAPAYGMKERMKADNIFPNKRLAAQLAKADPFKKTPLSDLLD 594


HSP 2 Score: 93.2 bits (230), Expect = 1.2e-17
Identity = 66/187 (35.29%), Postives = 95/187 (50.80%), Query Frame = 1

Query: 42  VFGKLEVPYSWEGNVAGFGTTAALSDRCISFERNNLATWTSSGIYISSHGLSSQAGAENS 101
           V+ KL++P   E N+A   + A + D+  +  R    +W+SS        LSS AGA+ +
Sbjct: 22  VYSKLDIPLG-ERNIA-IESNALIHDKHEALPRFYELSWSSS---TGRRSLSSDAGAKTT 81

Query: 102 GEEDKMEDGFSELDETLPSTSPLEDSKAADDSEEELTCGSEIDDDDDVDDGTQNELDLPE 161
           G++D +ED   +L       +P E S  ++D       G E   D+   +G + EL +PE
Sbjct: 82  GDDDDLEDKNVDL------ATPDETSSDSED-------GEEFSGDEGDIEGAELELHVPE 141

Query: 162 VETELAEKISTKRASSELFNAILGAPGLSVPIVLDKWVSEGKEISRAVVSLAMLNLRRRR 221
                       +  SE+F AI+   GLSV   LDKWV +GK+ +R     AML LR+RR
Sbjct: 142 -----------SKRPSEMFKAIVSVSGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRR 179

Query: 222 MFGKALQ 229
           MFG+ALQ
Sbjct: 202 MFGRALQ 179

BLAST of Cla002872 vs. Swiss-Prot
Match: PP135_ARATH (Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana GN=At1g80270 PE=2 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 6.2e-147
Identity = 255/416 (61.30%), Postives = 329/416 (79.09%), Query Frame = 1

Query: 291 QFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCV 350
           Q SEWLEA+ +++  ERDYASRLDL  K+ GL K E  + KIPKSF+GEV+YRTLLANCV
Sbjct: 181 QMSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCV 240

Query: 351 IANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHKRHDKRKMADDLLLMEKENIKPSLFT 410
            A NVKK+E VFNKMKDLGFPL+ F C+Q+LLLHKR D++K+AD LLLMEKENIKPSL T
Sbjct: 241 AAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLT 300

Query: 411 YKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEME 470
           YKILID KG +ND+ GMEQ+++TMK EGVE+DF   ++ A+HY+  GLKD+A+ +LKEME
Sbjct: 301 YKILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEME 360

Query: 471 DVYSKGSQWSCRILLPIYGELQMEDEVRRLWEICEPNPRIEECLAAIVAWGKLKNVPEAE 530
               + ++ + + LL IY  L  EDEV+R+W+ICE  P  EE LAAI A+GKL  V EAE
Sbjct: 361 GESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAE 420

Query: 531 KIFDRVVKTWKKLSPKHYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWDAIVKLY 590
            IF+++VK  ++ S   YS +L+VY D+KML+KGK+LVK+MA+SGC I  +TWDA++KLY
Sbjct: 421 AIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLY 480

Query: 591 VEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQYARRGDVHNAEKIFHNMRIWGYVAR 650
           VEAGEVEKADS L KA +++  K +  S+M IM++Y++RGDVHN EKIF  MR  GY +R
Sbjct: 481 VEAGEVEKADSLLDKASKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSR 540

Query: 651 FSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQVDAFRKTAVSDLLD 707
             Q+Q+L+QAY+NAK+PAYGM+DR+KADN+FPNK++A +LAQ D F+KTA+SD+LD
Sbjct: 541 LRQFQALMQAYINAKSPAYGMRDRLKADNIFPNKSMAAQLAQGDPFKKTAISDILD 596


HSP 2 Score: 108.2 bits (269), Expect = 3.7e-22
Identity = 67/167 (40.12%), Postives = 97/167 (58.08%), Query Frame = 1

Query: 71  SFERNNLATWTSSGI-------YISSHGLSSQAGAENSGEEDKMEDGFSELDETLPSTSP 130
           SF+ N++A+     +        +S+  LSS AG ++  EED +EDGFSEL+ +      
Sbjct: 34  SFDSNSIASTKREAVPRFYEISSLSNRALSSSAGTKSDQEEDDLEDGFSELEGSKSG--- 93

Query: 131 LEDSKAADDSEEELTCGSEIDDDDDVDDGTQNELDLPEVETELAEKISTKRASSELFNAI 190
            + S ++D+ E +L+           D+  + ELDL  +ET+++ K   K+  SELF  I
Sbjct: 94  -QGSTSSDEDEGKLSA----------DEEEEEELDL--IETDVSRKTVEKK-QSELFKTI 153

Query: 191 LGAPGLSVPIVLDKWVSEGKEISRAVVSLAMLNLRRRRMFGKALQHS 231
           + APGLS+   LDKWV EG EI+R  ++ AML LRRRRM+G+ALQ S
Sbjct: 154 VSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMS 183

BLAST of Cla002872 vs. Swiss-Prot
Match: PP234_ARATH (Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidopsis thaliana GN=At3g15590 PE=2 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 2.3e-133
Identity = 227/416 (54.57%), Postives = 316/416 (75.96%), Query Frame = 1

Query: 291 QFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCV 350
           Q  EWL A+ Q +F E +YAS+LDL+AKVH L KAE ++  IP+S +GEV+YRTLLANCV
Sbjct: 194 QLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCV 253

Query: 351 IANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHKRHDKRKMADDLLLMEKENIKPSLFT 410
           + ++V KAE++FNKMK+L FP + FACNQLLLL+  HD++K++D LLLME+ENIKPS  T
Sbjct: 254 LKHHVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMHDRKKISDVLLLMERENIKPSRAT 313

Query: 411 YKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEME 470
           Y  LI++KGL+ D+ GME++V+T+K EG+E+D  + SILAK+Y   GLK+ A+ ++KE+E
Sbjct: 314 YHFLINSKGLAGDITGMEKIVETIKEEGIELDPELQSILAKYYIRAGLKERAQDLMKEIE 373

Query: 471 DVYSKGSQWSCRILLPIYGELQMEDEVRRLWEICEPNPRIEECLAAIVAWGKLKNVPEAE 530
               + + W CR LLP+Y ++   D VRRL    + NPR + C++AI AWGKLK V EAE
Sbjct: 374 GKGLQQTPWVCRSLLPLYADIGDSDNVRRLSRFVDQNPRYDNCISAIKAWGKLKEVEEAE 433

Query: 531 KIFDRVVKTWKKLSPKHYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWDAIVKLY 590
            +F+R+V+ +K      Y  ++++Y++NKML KG++LVK+M ++G +IGPSTW A+VKLY
Sbjct: 434 AVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLY 493

Query: 591 VEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQYARRGDVHNAEKIFHNMRIWGYVAR 650
           ++AGEV KA+  L +A + N+ +P+FT+YM I+ +YA+RGDVHN EK+F  M+   Y A+
Sbjct: 494 IKAGEVGKAELILNRATKDNKMRPMFTTYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQ 553

Query: 651 FSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQVDAFRKTAVSDLLD 707
             QY++++ AY+NAKTPAYGM +RMKADNVFPNK+LA KLAQV+ F+K  VS LLD
Sbjct: 554 LMQYETVLLAYINAKTPAYGMIERMKADNVFPNKSLAAKLAQVNPFKKCPVSVLLD 609


HSP 2 Score: 422.9 bits (1086), Expect = 6.7e-117
Identity = 251/621 (40.42%), Postives = 368/621 (59.26%), Query Frame = 1

Query: 86  YISSHGLSSQAGAENSGEEDKMEDGFSELDETLPSTSPLEDSKAADDSEEELTCGSEIDD 145
           +   H LSS A A++ G+E   E+  SE +E +P +  + +    DDS  E   GS+ DD
Sbjct: 65  FFGIHKLSSIADAKDKGDEVVREEELSESEEAVPVSGDVPEGVVDDDSLFEPELGSDNDD 124

Query: 146 DDDVDDGTQNELDLPEVETELAEKISTKRASSELFNAILGAPGLSVPIVLDKWVSEGKEI 205
                      L++ E  ++   K + KR  SEL+ +I+     SV  VL+KWV EGK++
Sbjct: 125 -----------LEIEEKHSKDGGKPTKKRGQSELYESIVAYK--SVKHVLEKWVKEGKDL 184

Query: 206 SRAVVSLAMLNLRRRRMFGKALQHSRNGARAFFKSFSWFDVWLGSIQTPGSIFGSAFIYC 265
           S+A V+LA+ NLR+R+ +   LQ              W   WLG+         + F + 
Sbjct: 185 SQAEVTLAIHNLRKRKSYAMCLQ-------------LW--EWLGA--------NTQFEFT 244

Query: 266 WAYKVIGDIQSSILELIAAVSVWVSQFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKA 325
            A        +S L+L+A V   + +   +L+   +    E  Y + L      H + KA
Sbjct: 245 EAN------YASQLDLVAKVHS-LQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKA 304

Query: 326 ERYIAKIPKSFQGEVIYRTLLANCVIANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHK 385
           E    K+      E+ + T +                            FACNQLLLL+ 
Sbjct: 305 EDIFNKMK-----ELKFPTSV----------------------------FACNQLLLLYS 364

Query: 386 RHDKRKMADDLLLMEKENIKPSLFTYKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNV 445
            HD++K++D LLLME+ENIKPS  TY  LI++KGL+ D+ GME++V+T+K EG+E+D  +
Sbjct: 365 MHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEGIELDPEL 424

Query: 446 LSILAKHYASGGLKDEAKAILKEMEDVYSKGSQWSCRILLPIYGELQMEDEVRRLWEICE 505
            SILAK+Y   GLK+ A+ ++KE+E    + + W CR LLP+Y ++   D VRRL    +
Sbjct: 425 QSILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRLSRFVD 484

Query: 506 PNPRIEECLAAIVAWGKLKNVPEAEKIFDRVVKTWKKLSPKHYSTMLKVYSDNKMLTKGK 565
            NPR + C++AI AWGKLK V EAE +F+R+V+ +K      Y  ++++Y++NKML KG+
Sbjct: 485 QNPRYDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGR 544

Query: 566 ELVKQMADSGCSIGPSTWDAIVKLYVEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQ 625
           +LVK+M ++G +IGPSTW A+VKLY++AGEV KA+  L +A + N+ +P+FT+YM I+ +
Sbjct: 545 DLVKRMGNAGIAIGPSTWHALVKLYIKAGEVGKAELILNRATKDNKMRPMFTTYMAILEE 604

Query: 626 YARRGDVHNAEKIFHNMRIWGYVARFSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKT 685
           YA+RGDVHN EK+F  M+   Y A+  QY++++ AY+NAKTPAYGM +RMKADNVFPNK+
Sbjct: 605 YAKRGDVHNTEKVFMKMKRASYAAQLMQYETVLLAYINAKTPAYGMIERMKADNVFPNKS 609

Query: 686 LAGKLAQVDAFRKTAVSDLLD 707
           LA KLAQV+ F+K  VS LLD
Sbjct: 665 LAAKLAQVNPFKKCPVSVLLD 609

BLAST of Cla002872 vs. Swiss-Prot
Match: PPR19_ARATH (Pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Arabidopsis thaliana GN=At1g07590 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.0e-32
Identity = 106/417 (25.42%), Postives = 195/417 (46.76%), Query Frame = 1

Query: 291 QFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCV 350
           +  EW+         E +Y+  L+   K+HG+ + E+   ++P+ FQ E++Y  L+  C+
Sbjct: 118 ELMEWIIRERPYRLGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACL 177

Query: 351 IANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHKRHDKRKM-ADDLLLMEKENIKPSLF 410
               ++ A E   KM++LG+  +    N+L++ +    +RK+ A DL LM+ +   P + 
Sbjct: 178 DQGVIRLALEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVS 237

Query: 411 TYKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEM 470
           TY IL+  +   +++ G+ +  D MK  GVE +     ILA  +A   L   A+A  +E+
Sbjct: 238 TYHILMKLEANEHNIDGVLKAFDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEI 297

Query: 471 EDVYSKGSQWS-CRILLPIYGELQMEDEVRRLWEICE--PNPRIEECLAAIVAWGKLKNV 530
           E   + G  WS   IL+ +YG L  E E+ R W +     + R +  L A  A+ ++ N+
Sbjct: 298 EKSIT-GDNWSTLDILMILYGRLGKEKELARTWNVIRGFHHVRSKSYLLATEAFARVGNL 357

Query: 531 PEAEKIFDRVVKTWKKLSPKHYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWD-- 590
             AE+++  +         + ++++L VY  + ++ K   + ++M  +G      T+   
Sbjct: 358 DRAEELWLEMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHL 417

Query: 591 ----AIVKLYVEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQYARRGDVHNAEKIFH 650
               A  KL  EA +  +    L  +       P   + + I+  +A +GDV N+EK+F 
Sbjct: 418 ALGCAKAKLMKEALKNIEMGLNLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFE 477

Query: 651 NMRIWGYVARFSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQVDAFR 698
            ++   Y      Y +L +AY+ AK     +  RM      P+      L  V+ ++
Sbjct: 478 EVKNAKYNRYAFVYNALFKAYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLVEQYK 533

BLAST of Cla002872 vs. Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 6.7e-32
Identity = 106/414 (25.60%), Postives = 194/414 (46.86%), Query Frame = 1

Query: 291 QFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCV 350
           + SE +E  G    +  D A  LDL+AK   +   E Y   +P++ + E+ Y +LL NC 
Sbjct: 76  KLSEVMEERGMNKTVS-DQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLL-NCY 135

Query: 351 IANNV-KKAEEVFNKMKDLGFPLTTFACNQLLLLH-KRHDKRKMADDLLLMEKENIKPSL 410
               + +KAE + NKMK+L    ++ + N L+ L+ K  +  K+   +  ++ EN+ P  
Sbjct: 136 CKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDS 195

Query: 411 FTYKILIDAKGLSNDMLGMEQVVDTMKAEG-VEIDFNVLSILAKHYASGGLKDEAKAILK 470
           +TY + + A   +ND+ G+E+V++ M  +G V  D+   S +A  Y   GL  +A+  L+
Sbjct: 196 YTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQ 255

Query: 471 EMEDVYSKGSQWSCRILLPIYGELQMEDEVRRLW---EICEPNPRIEECLAAIVAWGKLK 530
           E+E   ++    + + L+ +YG L    EV R+W    +  P       L  I    KL 
Sbjct: 256 ELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLN 315

Query: 531 NVPEAEKIFDRVVKTWKKLSPKHYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWD 590
           ++P AE +F            +  + ++  Y+   ++ K  EL ++    G  +   TW+
Sbjct: 316 DLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWE 375

Query: 591 AIVKLYVEAGEVEKADSFLVKAVQKNRKK-----PLFTSYMVIMNQYARRGDVHNAEKIF 650
             +  YV++G++ +A   + KAV   +       P   +   +M+ + ++ DV+ AE + 
Sbjct: 376 IFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLL 435

Query: 651 HNMRIWGYVARFSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQV 694
             ++          ++ LI+ Y  A      M+ R+K +NV  N+     L +V
Sbjct: 436 EILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLLDEV 487

BLAST of Cla002872 vs. TrEMBL
Match: A0A0A0LFG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819890 PE=4 SV=1)

HSP 1 Score: 641.7 bits (1654), Expect = 1.0e-180
Identity = 319/418 (76.32%), Postives = 365/418 (87.32%), Query Frame = 1

Query: 291 QFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCV 350
           QFSEWLEASGQL+F E DYASRLDLIAKV GL+KAE YIAKIPKSFQGEV+YRTLLAN V
Sbjct: 189 QFSEWLEASGQLEFNENDYASRLDLIAKVQGLHKAESYIAKIPKSFQGEVMYRTLLANYV 248

Query: 351 IANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHKRHDKRKMADDLLLMEKENIKPSLFT 410
            ANNV KAEEVFNKMKDL FP+TTFA NQ+L+L+KR+D+RK+AD LLLMEKEN+KPS FT
Sbjct: 249 AANNVNKAEEVFNKMKDLEFPMTTFAYNQVLVLYKRNDRRKIADVLLLMEKENVKPSPFT 308

Query: 411 YKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEME 470
           YKILIDAKGLS D+ GMEQVVDTMKAEG+E+D   L +LAKHY S GLKD+AKA LKEME
Sbjct: 309 YKILIDAKGLSKDISGMEQVVDTMKAEGIELDVFALCLLAKHYVSCGLKDKAKATLKEME 368

Query: 471 DVYSKGSQWSCRILLPIYGELQMEDEVRRLWEICEPNPRIEECLAAIVAWGKLKNVPEAE 530
           ++ SKGS+W CR+LLP+YGEL+MEDEVRRLWEICE NP IEEC+AAIVAWGKLKN+ EAE
Sbjct: 369 EINSKGSRWPCRLLLPLYGELEMEDEVRRLWEICEANPHIEECMAAIVAWGKLKNIHEAE 428

Query: 531 KIFDRVVKTW--KKLSPKHYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWDAIVK 590
           KIFD+VVKTW  KK+S KHY TM+KVY D KMLTKGKELV QMA+SG SI P  WDA+VK
Sbjct: 429 KIFDKVVKTWPKKKISTKHYCTMIKVYGDCKMLTKGKELVNQMAESGYSIDPLAWDAVVK 488

Query: 591 LYVEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQYARRGDVHNAEKIFHNMRIWGYV 650
           LYVEAGEVEKAD+FLVKAV+K   +PL+ SY  +MN YARRGDVHNAEKIF+ MR  GY 
Sbjct: 489 LYVEAGEVEKADTFLVKAVKKYEMRPLYCSYRTLMNHYARRGDVHNAEKIFYKMRQSGYG 548

Query: 651 ARFSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQVDAFRKTAVSDLLD 707
             F+Q+++LIQAY+N+KTPAYGM++RM AD +FPNK LAGKLAQVD+FRKTA+ DLLD
Sbjct: 549 PWFNQFETLIQAYVNSKTPAYGMRERMMADKLFPNKALAGKLAQVDSFRKTALPDLLD 606

BLAST of Cla002872 vs. TrEMBL
Match: A0A0A0LFG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819890 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 3.3e-62
Identity = 142/202 (70.30%), Postives = 148/202 (73.27%), Query Frame = 1

Query: 31  RNRGYRVRTSYVFGKLEVPYSWEGNVAGFGTTAALSDRCISFERNNLATWTSSGIYISSH 90
           RN+GYRVRTSYVFGKLEVPY WEGNVAGFGT A LSDR IS ERNNLATW SSGIYISSH
Sbjct: 12  RNQGYRVRTSYVFGKLEVPYFWEGNVAGFGTIATLSDRYISSERNNLATWPSSGIYISSH 71

Query: 91  GLSSQAGAENSGEEDKMEDGFSELDETLPSTSPLEDSKAADDSEEELTCGSEIDDDDD-- 150
           GLSSQAGAENSGE    EDGFSELDETLP+T                   SEI DDDD  
Sbjct: 72  GLSSQAGAENSGE----EDGFSELDETLPTTR------------------SEIVDDDDNV 131

Query: 151 VDDGTQNELDLPEVETELAEKISTKRASSELFNAILGAPGLSVPIVLDKWVSEGKEISRA 210
           VDDGTQNELDL E ETELAEK  TK   SEL  AI  A GLSV   LDKWVSEG E+S  
Sbjct: 132 VDDGTQNELDLLEGETELAEKKFTKWVPSELTKAIWNASGLSVSSALDKWVSEGNELSWD 191

Query: 211 VVSLAMLNLRRRRMFGKALQHS 231
            +S  M++LRRRRMFGKALQ S
Sbjct: 192 DISSTMMSLRRRRMFGKALQFS 191


HSP 2 Score: 638.3 bits (1645), Expect = 1.1e-179
Identity = 317/417 (76.02%), Postives = 366/417 (87.77%), Query Frame = 1

Query: 291 QFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCV 350
           QFSEWLEA+G+LDF+E+DYASRLDLI K+ GL  AE YIAKIPKSFQGEV+YRTLLANCV
Sbjct: 208 QFSEWLEANGKLDFVEKDYASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYRTLLANCV 267

Query: 351 IANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHKRHDKRKMADDLLLMEKENIKPSLFT 410
           IA NV+KAEEVFNKMKDL FP+T FACNQLLLL+KR DKRK+AD LLLMEKEN+KPS FT
Sbjct: 268 IACNVQKAEEVFNKMKDLEFPITAFACNQLLLLYKRTDKRKVADILLLMEKENVKPSRFT 327

Query: 411 YKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEME 470
           Y+ILID KGLSND+ GMEQVVDTMKAEG+E+D + LS+LAKHY SGGLKD+AKAILKEME
Sbjct: 328 YRILIDTKGLSNDITGMEQVVDTMKAEGIELDVSTLSVLAKHYISGGLKDKAKAILKEME 387

Query: 471 DVYSKGSQWSCRILLPIYGELQMEDEVRRLWEICEPNPRIEECLAAIVAWGKLKNVPEAE 530
           ++ S+GS+W CRILLP+YGELQMEDEVRRLWEIC  NP IEEC+AAIVAWGKLKN+ EAE
Sbjct: 388 EINSEGSRWPCRILLPLYGELQMEDEVRRLWEICGSNPHIEECMAAIVAWGKLKNIQEAE 447

Query: 531 KIFDRVVKTWKKLSPKHYSTMLKVY-SDNKMLTKGKELVKQMADSGCSIGPSTWDAIVKL 590
           KIFDRVVKT +KLS +HYSTML VY  D+KMLTKGKE+VKQMA+SG  + P T DA+VKL
Sbjct: 448 KIFDRVVKTGEKLSARHYSTMLNVYREDSKMLTKGKEVVKQMAESGSRMDPVTLDAVVKL 507

Query: 591 YVEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQYARRGDVHNAEKIFHNMRIWGYVA 650
           YVEAGE EKADSFLVK V + +KKP+FT+Y+ +M++YA RGDV NAEKIF  MR +GYV 
Sbjct: 508 YVEAGEGEKADSFLVKTVLQYKKKPMFTTYITLMDRYASRGDVPNAEKIFGMMRKYGYVG 567

Query: 651 RFSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQVDAFRKTAVSDLLD 707
           R S +Q+LIQAY+NAK PAYGM++RMKAD+VFPNK LAGKLAQVD+ +   VSDLLD
Sbjct: 568 RLSHFQTLIQAYVNAKAPAYGMRERMKADSVFPNKALAGKLAQVDSLKMREVSDLLD 624

BLAST of Cla002872 vs. TrEMBL
Match: A0A0A0LEU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819910 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 6.6e-79
Identity = 243/595 (40.84%), Postives = 319/595 (53.61%), Query Frame = 1

Query: 31  RNRGYRVRTSYVFGKLEVPYSWEGNVAGFGTTAALSDRCISFERNNLATWTSSGIYISSH 90
           RN+GYRVRTSYVFGKLEVPY WEGNVAGFGT AALSDR I F+RNNL TW SS +YISSH
Sbjct: 12  RNQGYRVRTSYVFGKLEVPYFWEGNVAGFGTAAALSDRFIYFDRNNLTTWPSSEVYISSH 71

Query: 91  GLSSQAGAENSGEEDKMEDGFSELDETLPSTSPLEDSKAADDSEEELTCGSEIDDDDD-V 150
           GLS+QAGAENSGEE  +EDG SELDETLPSTSPLEDSK ADD+EEELT GSEIDDD+D V
Sbjct: 72  GLSTQAGAENSGEEGNVEDGCSELDETLPSTSPLEDSKTADDNEEELTSGSEIDDDNDVV 131

Query: 151 DDGTQNELDLPEVETELAEKISTKRASSELFNAILGAPGLSVPIVLDKWVSEGKEISRAV 210
           DDGT  ELDLPE ET L EKIS KRA SEL N I  APGL+V   LDKWVSEGKE+SR  
Sbjct: 132 DDGT--ELDLPEGETGLVEKISIKRAPSELLNVIWKAPGLTVSSALDKWVSEGKELSRDD 191

Query: 211 VSLAMLNLRRRRMFGKALQHSR----NGARAFFKSFSWFDVWLGSIQTPGSIFGSAFIYC 270
           +S AMLNLR+ RM+GKALQ S     NG   F +       +   +   G + G      
Sbjct: 192 ISSAMLNLRKCRMYGKALQFSEWLEANGKLDFVEK-----DYASRLDLIGKLRGLRMAEN 251

Query: 271 WAYKVIGDIQSSIL--ELIA--AVSVWVSQFSEWLEASGQLDFIERDYASRLDLIAKVHG 330
           +  K+    Q  ++   L+A   ++  V +  E       L+F    +A    L+     
Sbjct: 252 YIAKIPKSFQGEVVYRTLLANCVIACNVQKAEEVFNKMKDLEFPITAFACNQLLL----- 311

Query: 331 LYKA--ERYIAKIPKSFQGEVI------YRTLLANCVIANNVKKAEEVFNKMKDLGFPLT 390
           LYK   +R +A I    + E +      YR L+    ++N++   E+V + MK  G  L 
Sbjct: 312 LYKRTDKRKVADILLLMEKENVKPSRFTYRILIDTKGLSNDITGMEQVVDTMKAEGIELD 371

Query: 391 TFACNQLLLLHKRHDKRKMADD----LLLMEKENIKPSLFTYKILIDAKGLSNDMLGMEQ 450
               + L +L K +    + D     L  ME+ N + S +  +IL+   G     L ME 
Sbjct: 372 V---STLSVLAKHYISGGLKDKAKAILKEMEEINSEGSRWPCRILLPLYG----ELQMED 431

Query: 451 VVDTMKAEGVEIDFNVLSILAKHYASGGLKD--EAKAILKEMEDVYSKGSQWSCRILLPI 510
            V  +  E    + ++   +A   A G LK+  EA+ I   +     K S      +L +
Sbjct: 432 EVRRL-WEICGSNPHIEECMAAIVAWGKLKNIQEAEKIFDRVVKTGEKLSARHYSTMLNV 491

Query: 511 YGE----LQMEDEVRRLWEICEPNPRIEE-CLAAIVAWGKLKNVPEAEKIFDRVVKTWKK 570
           Y E    L    EV +  ++ E   R++   L A+V         E EK    +VKT  +
Sbjct: 492 YREDSKMLTKGKEVVK--QMAESGSRMDPVTLDAVVK--LYVEAGEGEKADSFLVKTVLQ 551

Query: 571 LSPK----HYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWDAIVKLYVEA 594
              K     Y T++  Y+    +   +++   M   G     S +  +++ YV A
Sbjct: 552 YKKKPMFTTYITLMDRYASRGDVPNAEKIFGMMRKYGYVGRLSHFQTLIQAYVNA 582


HSP 2 Score: 635.6 bits (1638), Expect = 7.3e-179
Identity = 311/416 (74.76%), Postives = 358/416 (86.06%), Query Frame = 1

Query: 291 QFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCV 350
           QFSEWLEASGQL+F E DYAS LDLIAKV GL+KAE YIAKIP SF+GE +YRTLLAN V
Sbjct: 193 QFSEWLEASGQLEFNEADYASHLDLIAKVQGLHKAETYIAKIPNSFRGEAVYRTLLANYV 252

Query: 351 IANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHKRHDKRKMADDLLLMEKENIKPSLFT 410
           +AN+VKKAEEVFN+MKDL FP+TTFA +Q+L+L+KR D+R++AD L LMEKEN+KP  FT
Sbjct: 253 LANDVKKAEEVFNRMKDLEFPMTTFAYDQMLILYKRIDRRRIADILSLMEKENVKPRPFT 312

Query: 411 YKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEME 470
           YKILIDAKGLSND+ GMEQVVDTMKAEG+++D + L +LAKHY  GGLKD+A  ILK  E
Sbjct: 313 YKILIDAKGLSNDISGMEQVVDTMKAEGIKLDVDTLLLLAKHYVLGGLKDKAMPILKATE 372

Query: 471 DVYSKGSQWSCRILLPIYGELQMEDEVRRLWEICEPNPRIEECLAAIVAWGKLKNVPEAE 530
           +V SKGS+W CR LLP+YGELQMEDEVRRLWEICEPNP +EEC+AAIVAWGKLKN+ EAE
Sbjct: 373 EVNSKGSRWPCRYLLPLYGELQMEDEVRRLWEICEPNPNVEECMAAIVAWGKLKNIQEAE 432

Query: 531 KIFDRVVKTWKKLSPKHYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWDAIVKLY 590
           KIFDRVVKTWK+LS KHYSTM+KVY D+KMLTKGKELV QMA SGC I P  WDA+VKLY
Sbjct: 433 KIFDRVVKTWKRLSTKHYSTMIKVYGDSKMLTKGKELVNQMAKSGCRIDPMIWDAVVKLY 492

Query: 591 VEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQYARRGDVHNAEKIFHNMRIWGYVAR 650
           VEAGEVEKADSFL KAV++   KPLF SY  +M  YAR+GDVHN+EKIFH +R  GY   
Sbjct: 493 VEAGEVEKADSFLFKAVKQYGMKPLFDSYRTLMVHYARKGDVHNSEKIFHKIRQSGYPTH 552

Query: 651 FSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQVDAFRKTAVSDLLD 707
           F Q+ +L+QAYLNAKTPAYGM++RM ADNVFPNK LAGKLAQ+D+FR+T VSDLLD
Sbjct: 553 FGQFVTLVQAYLNAKTPAYGMRERMMADNVFPNKALAGKLAQLDSFRQTTVSDLLD 608

BLAST of Cla002872 vs. TrEMBL
Match: E5GBN7_CUCME (DNA-binding protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.4e-65
Identity = 142/202 (70.30%), Postives = 150/202 (74.26%), Query Frame = 1

Query: 31  RNRGYRVRTSYVFGKLEVPYSWEGNVAGFGTTAALSDRCISFERNNLATWTSSGIYISSH 90
           RN GYRVRTSYVFGKLEVPY  EGN+AGFGTTA LS R ISFERNNLATW SSGIYISSH
Sbjct: 12  RNHGYRVRTSYVFGKLEVPYFGEGNIAGFGTTATLSGRFISFERNNLATWPSSGIYISSH 71

Query: 91  GLSSQAGAENSGEEDKMEDGFSELDETLPSTSPLEDSKAADDSEEELTCGSEIDDDDD-- 150
           GLS+QAGAENSGEED +EDGFSELDET P+T                   SEI DDD+  
Sbjct: 72  GLSTQAGAENSGEEDNVEDGFSELDETHPTTR------------------SEISDDDENV 131

Query: 151 VDDGTQNELDLPEVETELAEKISTKRASSELFNAILGAPGLSVPIVLDKWVSEGKEISRA 210
           VDDGTQNELDLPE ETELAEKIS K   SEL  AI  AP LSV   LDKWVSEG E+SR 
Sbjct: 132 VDDGTQNELDLPEGETELAEKISRKWVPSELNEAIWNAPALSVTSALDKWVSEGHELSRD 191

Query: 211 VVSLAMLNLRRRRMFGKALQHS 231
            +S  M  LR+RRMFGKALQ S
Sbjct: 192 DISSTMFGLRKRRMFGKALQFS 195


HSP 2 Score: 627.1 bits (1616), Expect = 2.6e-176
Identity = 315/416 (75.72%), Postives = 359/416 (86.30%), Query Frame = 1

Query: 291 QFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCV 350
           QFSEWLEASGQL+F E+DYASRLDLIAKV GL+KAE YIAKIPKSF GEV++RTLLAN V
Sbjct: 193 QFSEWLEASGQLEFNEKDYASRLDLIAKVQGLHKAESYIAKIPKSFHGEVVHRTLLANYV 252

Query: 351 IANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHKRHDKRKMADDLLLMEKENIKPSLFT 410
           +ANNVKKAEEVFNKMKDL FP+TTFA +Q+L+L+KR DK+K+AD LLLMEKEN+KPS FT
Sbjct: 253 VANNVKKAEEVFNKMKDLKFPMTTFAYDQMLILYKRIDKKKIADVLLLMEKENVKPSRFT 312

Query: 411 YKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEME 470
           Y +LID KGLSND+ GMEQVVDTMKA G+E D   LSILAKHY SGG KD+AKAILKE+E
Sbjct: 313 YIVLIDVKGLSNDIRGMEQVVDTMKAGGMEPDSYTLSILAKHYVSGGYKDKAKAILKEIE 372

Query: 471 DVYSKGSQWSCRILLPIYGELQMEDEVRRLWEICEPNPRIEECLAAIVAWGKLKNVPEAE 530
           +  S+  QWS RILLP+Y  LQMEDEVRRLW+ CE NPRIEEC+AAIVAWG+LKNVPEAE
Sbjct: 373 ESNSRIPQWSRRILLPLYVSLQMEDEVRRLWKSCEENPRIEECMAAIVAWGRLKNVPEAE 432

Query: 531 KIFDRVVKTWKKLSPKHYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWDAIVKLY 590
           +IF+ VVKT+ KLS +HY TMLKVY D+KMLTKGKELV QMA SGC I P TWDA+VKLY
Sbjct: 433 RIFNIVVKTFTKLSTRHYYTMLKVYGDSKMLTKGKELVNQMAKSGCRIDPFTWDAVVKLY 492

Query: 591 VEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQYARRGDVHNAEKIFHNMRIWGYVAR 650
           VEAGEVEKADSFLVKA Q+   KPLFTSYM +M+ YAR+GDVHNAEKIFH MR  GY+ R
Sbjct: 493 VEAGEVEKADSFLVKAAQQYGMKPLFTSYMTLMDHYARKGDVHNAEKIFHKMRQSGYMPR 552

Query: 651 FSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQVDAFRKTAVSDLLD 707
             Q+ +LI+AY+NAKTPAYGM++RM  D +FPNK LAG+LAQVD FRKTAVSDLLD
Sbjct: 553 LGQFGTLIRAYVNAKTPAYGMRERMMGDKLFPNKALAGQLAQVDPFRKTAVSDLLD 608

BLAST of Cla002872 vs. TrEMBL
Match: A0A0A0LFH0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819940 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.2e-66
Identity = 142/200 (71.00%), Postives = 155/200 (77.50%), Query Frame = 1

Query: 31  RNRGYRVRTSYVFGKLEVPYSWEGNVAGFGTTAALSDRCISFERNNLATWTSSGIYISSH 90
           RN+GYRVRTS+VFGKLEVPYSWE NVAGF TTA LSDR ISFERNNLATW SSGIYISSH
Sbjct: 12  RNQGYRVRTSHVFGKLEVPYSWEANVAGFVTTATLSDRFISFERNNLATWPSSGIYISSH 71

Query: 91  GLSSQAGAENSGEEDKMEDGFSELDETLPSTSPLEDSKAADDSEEELTCGSEIDDDDDVD 150
           GLS+QAGAENSGEED +EDGFSELDE LP+T     S+ AD            DDDD VD
Sbjct: 72  GLSTQAGAENSGEEDNVEDGFSELDEALPTTR----SEIAD------------DDDDIVD 131

Query: 151 DGTQNELDLPEVETELAEKISTKRASSELFNAILGAPGLSVPIVLDKWVSEGKEISRAVV 210
           DG+QNELDL E ET LAEK S+K   SEL   I  APGLSV   LDKWVSEG E+SR+ +
Sbjct: 132 DGSQNELDLLEGETVLAEKKSSKWVPSELTKVIWNAPGLSVASALDKWVSEGNELSRSDI 191

Query: 211 SLAMLNLRRRRMFGKALQHS 231
           SL M++LRRRRMFGKALQ S
Sbjct: 192 SLTMMSLRRRRMFGKALQFS 195


HSP 2 Score: 626.7 bits (1615), Expect = 3.4e-176
Identity = 314/416 (75.48%), Postives = 360/416 (86.54%), Query Frame = 1

Query: 291 QFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCV 350
           QFSEWLEA+GQL+F ERDYASR+ LIAKV GL+KAE YIAKIPKSFQGEV++R LLAN V
Sbjct: 195 QFSEWLEANGQLEFNERDYASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYV 254

Query: 351 IANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHKRHDKRKMADDLLLMEKENIKPSLFT 410
           +ANNV+KAEEVFNK+KDL FP++ FA NQ+L+L+K+ D+RK+AD LLLMEKENIKP  FT
Sbjct: 255 VANNVEKAEEVFNKIKDLEFPMSIFAYNQMLVLYKKIDRRKIADVLLLMEKENIKPCPFT 314

Query: 411 YKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEME 470
           YKILID KGLSND+ GMEQVVD+MKAEG+E+D + LS+LAKHY S GLK +AKAILKE+E
Sbjct: 315 YKILIDGKGLSNDISGMEQVVDSMKAEGIELDVSTLSLLAKHYVSCGLKVKAKAILKEIE 374

Query: 471 DVYSKGSQWSCRILLPIYGELQMEDEVRRLWEICEPNPRIEECLAAIVAWGKLKNVPEAE 530
           +  S G QW CRILLP YG+LQMEDEVRRLWEICE NP IEEC+AAIVAWG+LKNV EAE
Sbjct: 375 ETNSNGPQWLCRILLPFYGKLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAE 434

Query: 531 KIFDRVVKTWKKLSPKHYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWDAIVKLY 590
           KIFDRVVKTWKKLS +HYS M+ VY D+KMLTKGKE+V QMA+SGC I   T +AIVKLY
Sbjct: 435 KIFDRVVKTWKKLSARHYSIMMNVYRDSKMLTKGKEVVNQMAESGCHIDLLTCNAIVKLY 494

Query: 591 VEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQYARRGDVHNAEKIFHNMRIWGYVAR 650
           VEAGEVEKADSFLVKAV+K   KPLFTSY  +M+ YARRGDVHNAEKIF  MR   Y+ R
Sbjct: 495 VEAGEVEKADSFLVKAVKKYGMKPLFTSYKTLMDHYARRGDVHNAEKIFDKMRQSSYIPR 554

Query: 651 FSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQVDAFRKTAVSDLLD 707
             Q+ +LIQAY+NAKTPAYGM++RM AD VFPNKTLAG+LAQVD+FRKTAVSDLLD
Sbjct: 555 LGQFGTLIQAYVNAKTPAYGMRERMMADKVFPNKTLAGQLAQVDSFRKTAVSDLLD 610

BLAST of Cla002872 vs. NCBI nr
Match: gi|659085107|ref|XP_008443247.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucumis melo])

HSP 1 Score: 649.4 bits (1674), Expect = 7.1e-183
Identity = 315/416 (75.72%), Postives = 366/416 (87.98%), Query Frame = 1

Query: 291 QFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCV 350
           QFSEWLEASG+L+F ++DYASRLDLI K+ GL  AE Y+AKIPKSFQGEV+YRTLLANCV
Sbjct: 211 QFSEWLEASGKLNFTDKDYASRLDLIGKLRGLRMAENYLAKIPKSFQGEVVYRTLLANCV 270

Query: 351 IANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHKRHDKRKMADDLLLMEKENIKPSLFT 410
           IA+NV+KAEEVFNKMKDL FP+T FAC+QLLLL++R DKRK+AD LLLMEKEN+KPS FT
Sbjct: 271 IASNVQKAEEVFNKMKDLEFPITAFACSQLLLLYRRTDKRKIADILLLMEKENVKPSRFT 330

Query: 411 YKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEME 470
           YKILIDAKGLSND+ GMEQVVDTMKA+G+E+DF+ L++LAKHY SGGLKD+AKA LK+ME
Sbjct: 331 YKILIDAKGLSNDISGMEQVVDTMKADGIELDFDTLALLAKHYVSGGLKDKAKATLKQME 390

Query: 471 DVYSKGSQWSCRILLPIYGELQMEDEVRRLWEICEPNPRIEECLAAIVAWGKLKNVPEAE 530
           ++ S+GS+W CRILLP YGEL+MEDEVRRLWEICE +P IEEC+AAIVAWGKLKNV EAE
Sbjct: 391 EINSQGSRWPCRILLPRYGELEMEDEVRRLWEICESDPHIEECMAAIVAWGKLKNVQEAE 450

Query: 531 KIFDRVVKTWKKLSPKHYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWDAIVKLY 590
           KIFDRVVK+ KKLS +HYSTM+ VY   KMLTKGKELV QMA+SGC + P TWDA+VK Y
Sbjct: 451 KIFDRVVKSGKKLSARHYSTMMNVYRQTKMLTKGKELVNQMAESGCRMDPLTWDAVVKFY 510

Query: 591 VEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQYARRGDVHNAEKIFHNMRIWGYVAR 650
           VEAGEVEKADSFLVKAVQ+N+KKPLF +YM +M+ YA RGDV NAE IF  MR  GY+ R
Sbjct: 511 VEAGEVEKADSFLVKAVQQNKKKPLFATYMTLMHHYASRGDVPNAENIFDRMRRLGYMGR 570

Query: 651 FSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQVDAFRKTAVSDLLD 707
           F+Q+Q+L+QAY+NAK PAYGM++RM  DN+FPNK LAGKLAQVD FR T VSDLLD
Sbjct: 571 FTQFQTLVQAYVNAKAPAYGMRERMMVDNIFPNKALAGKLAQVDPFRMTEVSDLLD 626

BLAST of Cla002872 vs. NCBI nr
Match: gi|659085107|ref|XP_008443247.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucumis melo])

HSP 1 Score: 328.6 bits (841), Expect = 2.8e-86
Identity = 247/588 (42.01%), Postives = 333/588 (56.63%), Query Frame = 1

Query: 31  RNRGYRVRTSYVFGKLEVPYSWEGNVAGFGTTAALSDRCISFERNNLATWTSSGIYISSH 90
           RN+GY+VRTSYVFGKLEVP+ WEGNVAGFGTT ALSDR ISFERNNLATW S+G+YISSH
Sbjct: 12  RNQGYKVRTSYVFGKLEVPFFWEGNVAGFGTTTALSDRFISFERNNLATWPSAGVYISSH 71

Query: 91  GLSSQAGAENSGEEDKMEDGFSELDETLPSTSPLEDSKAADDSEEELTCGSEIDDDDD-- 150
           GLS+QAGAENSGEED ++DGFSELDETL STSPLEDSKAADD+EEELT GSEIDDDDD  
Sbjct: 72  GLSTQAGAENSGEEDNVKDGFSELDETLASTSPLEDSKAADDNEEELTSGSEIDDDDDNA 131

Query: 151 VDDGTQNELDLPEVETELAEKISTKRASSELFNAILGAPGLSVPIVLDKWVSEGKEISRA 210
           VDDGTQNELDL E ET LAEK STKR  SELFN I  APGLSV   LDKWVSEGKE+SRA
Sbjct: 132 VDDGTQNELDLLEGETGLAEKKSTKRGPSELFNVIWKAPGLSVANALDKWVSEGKELSRA 191

Query: 211 VVSLAMLNLRRRRMFGKALQHSRNGARAFFKSFSWFDVWLGSIQTPGSIFGSAFIYCWAY 270
            +SLAML LR+R+MFGKALQ S     +   +F+  D +   +   G + G      +  
Sbjct: 192 DISLAMLYLRKRQMFGKALQFSEWLEASGKLNFTDKD-YASRLDLIGKLRGLRMAENYLA 251

Query: 271 KVIGDIQSSIL--ELIA--AVSVWVSQFSEWLEASGQLDFIERDYASRLDLIAKVHGLYK 330
           K+    Q  ++   L+A   ++  V +  E       L+F    +A    L+     LY+
Sbjct: 252 KIPKSFQGEVVYRTLLANCVIASNVQKAEEVFNKMKDLEFPITAFACSQLLL-----LYR 311

Query: 331 A--ERYIAKIPKSFQGEVI------YRTLLANCVIANNVKKAEEVFNKMKDLGFPLTTFA 390
              +R IA I    + E +      Y+ L+    ++N++   E+V + MK  G  L    
Sbjct: 312 RTDKRKIADILLLMEKENVKPSRFTYKILIDAKGLSNDISGMEQVVDTMKADGIELD--- 371

Query: 391 CNQLLLLHKRHD----KRKMADDLLLMEKENIKPSLFTYKILIDAKGLSNDMLGMEQVVD 450
            + L LL K +     K K    L  ME+ N + S +  +IL+   G     L ME  V 
Sbjct: 372 FDTLALLAKHYVSGGLKDKAKATLKQMEEINSQGSRWPCRILLPRYG----ELEMEDEVR 431

Query: 451 TMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEMEDVYSKGSQWSCR---ILLPIYG 510
            +  E  E D ++   +A   A G LK+  +A  K  + V   G + S R    ++ +Y 
Sbjct: 432 RL-WEICESDPHIEECMAAIVAWGKLKNVQEA-EKIFDRVVKSGKKLSARHYSTMMNVYR 491

Query: 511 ELQMEDEVRRLW-EICEPNPRIEECL--AAIVAWGKLKNVPEAEKIFDRVVKTWKKLSP- 570
           + +M  + + L  ++ E   R++     A +  + +   V +A+    + V+  KK    
Sbjct: 492 QTKMLTKGKELVNQMAESGCRMDPLTWDAVVKFYVEAGEVEKADSFLVKAVQQNKKKPLF 551

Query: 571 KHYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWDAIVKLYVEA 594
             Y T++  Y+    +   + +  +M   G     + +  +V+ YV A
Sbjct: 552 ATYMTLMHHYASRGDVPNAENIFDRMRRLGYMGRFTQFQTLVQAYVNA 584


HSP 2 Score: 641.7 bits (1654), Expect = 1.5e-180
Identity = 319/418 (76.32%), Postives = 365/418 (87.32%), Query Frame = 1

Query: 291 QFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCV 350
           QFSEWLEASGQL+F E DYASRLDLIAKV GL+KAE YIAKIPKSFQGEV+YRTLLAN V
Sbjct: 189 QFSEWLEASGQLEFNENDYASRLDLIAKVQGLHKAESYIAKIPKSFQGEVMYRTLLANYV 248

Query: 351 IANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHKRHDKRKMADDLLLMEKENIKPSLFT 410
            ANNV KAEEVFNKMKDL FP+TTFA NQ+L+L+KR+D+RK+AD LLLMEKEN+KPS FT
Sbjct: 249 AANNVNKAEEVFNKMKDLEFPMTTFAYNQVLVLYKRNDRRKIADVLLLMEKENVKPSPFT 308

Query: 411 YKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEME 470
           YKILIDAKGLS D+ GMEQVVDTMKAEG+E+D   L +LAKHY S GLKD+AKA LKEME
Sbjct: 309 YKILIDAKGLSKDISGMEQVVDTMKAEGIELDVFALCLLAKHYVSCGLKDKAKATLKEME 368

Query: 471 DVYSKGSQWSCRILLPIYGELQMEDEVRRLWEICEPNPRIEECLAAIVAWGKLKNVPEAE 530
           ++ SKGS+W CR+LLP+YGEL+MEDEVRRLWEICE NP IEEC+AAIVAWGKLKN+ EAE
Sbjct: 369 EINSKGSRWPCRLLLPLYGELEMEDEVRRLWEICEANPHIEECMAAIVAWGKLKNIHEAE 428

Query: 531 KIFDRVVKTW--KKLSPKHYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWDAIVK 590
           KIFD+VVKTW  KK+S KHY TM+KVY D KMLTKGKELV QMA+SG SI P  WDA+VK
Sbjct: 429 KIFDKVVKTWPKKKISTKHYCTMIKVYGDCKMLTKGKELVNQMAESGYSIDPLAWDAVVK 488

Query: 591 LYVEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQYARRGDVHNAEKIFHNMRIWGYV 650
           LYVEAGEVEKAD+FLVKAV+K   +PL+ SY  +MN YARRGDVHNAEKIF+ MR  GY 
Sbjct: 489 LYVEAGEVEKADTFLVKAVKKYEMRPLYCSYRTLMNHYARRGDVHNAEKIFYKMRQSGYG 548

Query: 651 ARFSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQVDAFRKTAVSDLLD 707
             F+Q+++LIQAY+N+KTPAYGM++RM AD +FPNK LAGKLAQVD+FRKTA+ DLLD
Sbjct: 549 PWFNQFETLIQAYVNSKTPAYGMRERMMADKLFPNKALAGKLAQVDSFRKTALPDLLD 606

BLAST of Cla002872 vs. NCBI nr
Match: gi|449437710|ref|XP_004136634.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g15480, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 248.1 bits (632), Expect = 4.7e-62
Identity = 142/202 (70.30%), Postives = 148/202 (73.27%), Query Frame = 1

Query: 31  RNRGYRVRTSYVFGKLEVPYSWEGNVAGFGTTAALSDRCISFERNNLATWTSSGIYISSH 90
           RN+GYRVRTSYVFGKLEVPY WEGNVAGFGT A LSDR IS ERNNLATW SSGIYISSH
Sbjct: 12  RNQGYRVRTSYVFGKLEVPYFWEGNVAGFGTIATLSDRYISSERNNLATWPSSGIYISSH 71

Query: 91  GLSSQAGAENSGEEDKMEDGFSELDETLPSTSPLEDSKAADDSEEELTCGSEIDDDDD-- 150
           GLSSQAGAENSGE    EDGFSELDETLP+T                   SEI DDDD  
Sbjct: 72  GLSSQAGAENSGE----EDGFSELDETLPTTR------------------SEIVDDDDNV 131

Query: 151 VDDGTQNELDLPEVETELAEKISTKRASSELFNAILGAPGLSVPIVLDKWVSEGKEISRA 210
           VDDGTQNELDL E ETELAEK  TK   SEL  AI  A GLSV   LDKWVSEG E+S  
Sbjct: 132 VDDGTQNELDLLEGETELAEKKFTKWVPSELTKAIWNASGLSVSSALDKWVSEGNELSWD 191

Query: 211 VVSLAMLNLRRRRMFGKALQHS 231
            +S  M++LRRRRMFGKALQ S
Sbjct: 192 DISSTMMSLRRRRMFGKALQFS 191


HSP 2 Score: 641.0 bits (1652), Expect = 2.5e-180
Identity = 316/416 (75.96%), Postives = 360/416 (86.54%), Query Frame = 1

Query: 291 QFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCV 350
           QFSEWLEASGQL+F E DYAS LDLIAKV GL+KAE YIAKIP SF+GE +YRTLLAN V
Sbjct: 193 QFSEWLEASGQLEFNEADYASHLDLIAKVQGLHKAETYIAKIPNSFRGEAVYRTLLANYV 252

Query: 351 IANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHKRHDKRKMADDLLLMEKENIKPSLFT 410
           +AN+VKKAEEVFN+MKDL FP+TTFA +Q+L+L+KR D+R++AD L LMEKEN+KP  FT
Sbjct: 253 LANDVKKAEEVFNRMKDLEFPMTTFAYDQMLILYKRIDRRRIADILSLMEKENVKPRPFT 312

Query: 411 YKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEME 470
           YKILIDAKGLSND+ GMEQVVDTMKAEG+++D + L +LAKHY  GGLKD+A  ILK  E
Sbjct: 313 YKILIDAKGLSNDISGMEQVVDTMKAEGIKLDVDTLLLLAKHYVLGGLKDKAMPILKATE 372

Query: 471 DVYSKGSQWSCRILLPIYGELQMEDEVRRLWEICEPNPRIEECLAAIVAWGKLKNVPEAE 530
           +V SKGS+W CR LLP+YGELQMEDEVRRLWEICEPNP +EEC+AAIVAWGKLKN+ EAE
Sbjct: 373 EVNSKGSRWPCRYLLPLYGELQMEDEVRRLWEICEPNPNVEECMAAIVAWGKLKNIQEAE 432

Query: 531 KIFDRVVKTWKKLSPKHYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWDAIVKLY 590
           KIFDRVVKTWK+LS KHYSTM+ VY DNKMLTKGKELV QMA+ GCS+ P TWDA+VKLY
Sbjct: 433 KIFDRVVKTWKRLSTKHYSTMMNVYGDNKMLTKGKELVNQMAERGCSMDPFTWDAVVKLY 492

Query: 591 VEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQYARRGDVHNAEKIFHNMRIWGYVAR 650
           VEAGEVEKADSFLVKA +K   KPLF SY  +M+ YARRGDVHNAEKIF  M   GY+ R
Sbjct: 493 VEAGEVEKADSFLVKAAKKFGMKPLFNSYRTLMDHYARRGDVHNAEKIFEKMIQSGYLPR 552

Query: 651 FSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQVDAFRKTAVSDLLD 707
           FSQ+ +LIQAY+NAKTPAYGM+DRM A  VFPNK LAG+LAQVDAFR+TAVSDLLD
Sbjct: 553 FSQFGTLIQAYVNAKTPAYGMRDRMMAHKVFPNKALAGQLAQVDAFRETAVSDLLD 608

BLAST of Cla002872 vs. NCBI nr
Match: gi|659085117|ref|XP_008443254.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isoform X3 [Cucumis melo])

HSP 1 Score: 258.5 bits (659), Expect = 3.5e-65
Identity = 142/202 (70.30%), Postives = 150/202 (74.26%), Query Frame = 1

Query: 31  RNRGYRVRTSYVFGKLEVPYSWEGNVAGFGTTAALSDRCISFERNNLATWTSSGIYISSH 90
           RN GYRVRTSYVFGKLEVPY  EGN+AGFGTTA LS R ISFERNNLATW SSGIYISSH
Sbjct: 12  RNHGYRVRTSYVFGKLEVPYFGEGNIAGFGTTATLSGRFISFERNNLATWPSSGIYISSH 71

Query: 91  GLSSQAGAENSGEEDKMEDGFSELDETLPSTSPLEDSKAADDSEEELTCGSEIDDDDD-- 150
           GLS+QAGAENSGEED +EDGFSELDET P+T                   SEI DDD+  
Sbjct: 72  GLSTQAGAENSGEEDNVEDGFSELDETHPTTR------------------SEISDDDENV 131

Query: 151 VDDGTQNELDLPEVETELAEKISTKRASSELFNAILGAPGLSVPIVLDKWVSEGKEISRA 210
           VDDGTQNELDLPE ETELAEKIS K   SEL  AI  AP LSV   LDKWVSEG E+SR 
Sbjct: 132 VDDGTQNELDLPEGETELAEKISRKWVPSELNEAIWNAPALSVTSALDKWVSEGHELSRD 191

Query: 211 VVSLAMLNLRRRRMFGKALQHS 231
            +S  M  LR+RRMFGKALQ S
Sbjct: 192 DISSTMFGLRKRRMFGKALQFS 195


HSP 2 Score: 639.0 bits (1647), Expect = 9.5e-180
Identity = 314/416 (75.48%), Postives = 366/416 (87.98%), Query Frame = 1

Query: 291 QFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCV 350
           +FSEWLEA+G+L   +RDYAS+LDLI K+ GL  AE YI+KIPKSFQGEV+YRTLLANCV
Sbjct: 182 KFSEWLEANGKL-VTDRDYASQLDLIGKLRGLRMAENYISKIPKSFQGEVVYRTLLANCV 241

Query: 351 IANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHKRHDKRKMADDLLLMEKENIKPSLFT 410
           ++ NV+KAEEVFNKMKDL FP+T FACNQLLLL+KR DK+K+AD LLLMEKEN+KPS FT
Sbjct: 242 MSTNVRKAEEVFNKMKDLEFPITAFACNQLLLLYKRTDKKKIADVLLLMEKENVKPSPFT 301

Query: 411 YKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEME 470
           YKILIDAKGLSND+ GMEQVVDTMKAEG+++    L +LAKHY S GLKD+AKA LKE E
Sbjct: 302 YKILIDAKGLSNDISGMEQVVDTMKAEGIKLGVGTLLLLAKHYVSAGLKDKAKATLKETE 361

Query: 471 DVYSKGSQWSCRILLPIYGELQMEDEVRRLWEICEPNPRIEECLAAIVAWGKLKNVPEAE 530
           ++ SKGS+  CR LLP+YGELQMEDEVRRLWEICE NP +EEC+AAIVAWGKLKNV EAE
Sbjct: 362 EINSKGSRRPCRFLLPLYGELQMEDEVRRLWEICESNPHVEECMAAIVAWGKLKNVQEAE 421

Query: 531 KIFDRVVKTWKKLSPKHYSTMLKVYSDNKMLTKGKELVKQMADSGCSIGPSTWDAIVKLY 590
           KIFDRVVKT KKLS +HYSTM+ VY D+KMLTKGKELV QMA+SGCS+ P TWDA+VKLY
Sbjct: 422 KIFDRVVKTGKKLSTRHYSTMMNVYRDSKMLTKGKELVNQMAESGCSMDPFTWDAVVKLY 481

Query: 591 VEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQYARRGDVHNAEKIFHNMRIWGYVAR 650
           VEAGEVEKADSFLVKAVQ+++KKPLF +Y+ +M+ YA RGDV NAE+IF  +RI GYV R
Sbjct: 482 VEAGEVEKADSFLVKAVQQSKKKPLFATYIALMDHYASRGDVPNAERIFDKLRILGYVGR 541

Query: 651 FSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQVDAFRKTAVSDLLD 707
           F+QYQ+LIQAY+NAKTPAYGM++RMKADN+FPNK LAG+LAQVD+F+ T VSDLLD
Sbjct: 542 FTQYQTLIQAYVNAKTPAYGMRERMKADNIFPNKALAGQLAQVDSFKMTDVSDLLD 596

BLAST of Cla002872 vs. NCBI nr
Match: gi|659085109|ref|XP_008443248.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 266.9 bits (681), Expect = 9.8e-68
Identity = 206/485 (42.47%), Postives = 259/485 (53.40%), Query Frame = 1

Query: 31  RNRGYRVRTSYVFGKLEVPYSWEGNVAGFGTTAALSDRCISFERNNLATWTSSGIYISSH 90
           RN+GYRVRTSYVFGKLEVPY WEGNVAGFGTTAALSDR ISFERNNL TW SSG+YISSH
Sbjct: 12  RNQGYRVRTSYVFGKLEVPYFWEGNVAGFGTTAALSDRFISFERNNLETWPSSGVYISSH 71

Query: 91  GLSSQAGAENSGEEDKMEDGFSELDETLPSTSPLEDSKAADDSEEELTCGSEIDDDDDVD 150
           GLS+QAGAENSGEE  +E                       D+EEELT GSEIDDDD+  
Sbjct: 72  GLSTQAGAENSGEEGNVE-----------------------DNEEELTSGSEIDDDDE-- 131

Query: 151 DGTQNELDLPEVETELAEKISTKRASSELFNAILGAPGLSVPIVLDKWVSEGKEISRAVV 210
             TQNELDLPE ET LAEKISTK A SELFN I  APGLSVP  LDKWVSEGKE+SRA +
Sbjct: 132 --TQNELDLPEGETGLAEKISTKGAPSELFNIIWKAPGLSVPSALDKWVSEGKELSRADI 191

Query: 211 SLAMLNLRRRRMFGKALQHSR----NGARAFFKSFSWFDVWLGSIQTPGSIFGSAFIYCW 270
           SL ML LRRRRMFGKAL+ S     NG     + ++        +   G + G      +
Sbjct: 192 SLTMLYLRRRRMFGKALKFSEWLEANGKLVTDRDYA------SQLDLIGKLRGLRMAENY 251

Query: 271 AYKVIGDIQSSIL--ELIA--AVSVWVSQFSEWLEASGQLDFIERDYASRLDLIAKVHGL 330
             K+    Q  ++   L+A   +S  V +  E       L+F    +A    L+     L
Sbjct: 252 ISKIPKSFQGEVVYRTLLANCVMSTNVRKAEEVFNKMKDLEFPITAFACNQLLL-----L 311

Query: 331 YKA--ERYIAKIPKSFQGEVI------YRTLLANCVIANNVKKAEEVFNKMKDLGFPLTT 390
           YK   ++ IA +    + E +      Y+ L+    ++N++   E+V + MK  G  L  
Sbjct: 312 YKRTDKKKIADVLLLMEKENVKPSPFTYKILIDAKGLSNDISGMEQVVDTMKAEGIKL-- 371

Query: 391 FACNQLLLLHKRHDKRKMADDLLLMEKE----NIKPSLFTYKILIDAKGLSNDMLGMEQV 450
                LLLL K +    + D      KE    N K S    + L+   G     L ME  
Sbjct: 372 -GVGTLLLLAKHYVSAGLKDKAKATLKETEEINSKGSRRPCRFLLPLYG----ELQMEDE 431

Query: 451 VDTMKAEGVEIDFNVLSILAKHYASGGLKD--EAKAILKEMEDVYSKGSQWSCRILLPIY 494
           V  +  E  E + +V   +A   A G LK+  EA+ I   +     K S      ++ +Y
Sbjct: 432 VRRL-WEICESNPHVEECMAAIVAWGKLKNVQEAEKIFDRVVKTGKKLSTRHYSTMMNVY 450


HSP 2 Score: 638.3 bits (1645), Expect = 1.6e-179
Identity = 317/417 (76.02%), Postives = 366/417 (87.77%), Query Frame = 1

Query: 291 QFSEWLEASGQLDFIERDYASRLDLIAKVHGLYKAERYIAKIPKSFQGEVIYRTLLANCV 350
           QFSEWLEA+G+LDF+E+DYASRLDLI K+ GL  AE YIAKIPKSFQGEV+YRTLLANCV
Sbjct: 185 QFSEWLEANGKLDFVEKDYASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYRTLLANCV 244

Query: 351 IANNVKKAEEVFNKMKDLGFPLTTFACNQLLLLHKRHDKRKMADDLLLMEKENIKPSLFT 410
           IA NV+KAEEVFNKMKDL FP+T FACNQLLLL+KR DKRK+AD LLLMEKEN+KPS FT
Sbjct: 245 IACNVQKAEEVFNKMKDLEFPITAFACNQLLLLYKRTDKRKVADILLLMEKENVKPSRFT 304

Query: 411 YKILIDAKGLSNDMLGMEQVVDTMKAEGVEIDFNVLSILAKHYASGGLKDEAKAILKEME 470
           Y+ILID KGLSND+ GMEQVVDTMKAEG+E+D + LS+LAKHY SGGLKD+AKAILKEME
Sbjct: 305 YRILIDTKGLSNDITGMEQVVDTMKAEGIELDVSTLSVLAKHYISGGLKDKAKAILKEME 364

Query: 471 DVYSKGSQWSCRILLPIYGELQMEDEVRRLWEICEPNPRIEECLAAIVAWGKLKNVPEAE 530
           ++ S+GS+W CRILLP+YGELQMEDEVRRLWEIC  NP IEEC+AAIVAWGKLKN+ EAE
Sbjct: 365 EINSEGSRWPCRILLPLYGELQMEDEVRRLWEICGSNPHIEECMAAIVAWGKLKNIQEAE 424

Query: 531 KIFDRVVKTWKKLSPKHYSTMLKVY-SDNKMLTKGKELVKQMADSGCSIGPSTWDAIVKL 590
           KIFDRVVKT +KLS +HYSTML VY  D+KMLTKGKE+VKQMA+SG  + P T DA+VKL
Sbjct: 425 KIFDRVVKTGEKLSARHYSTMLNVYREDSKMLTKGKEVVKQMAESGSRMDPVTLDAVVKL 484

Query: 591 YVEAGEVEKADSFLVKAVQKNRKKPLFTSYMVIMNQYARRGDVHNAEKIFHNMRIWGYVA 650
           YVEAGE EKADSFLVK V + +KKP+FT+Y+ +M++YA RGDV NAEKIF  MR +GYV 
Sbjct: 485 YVEAGEGEKADSFLVKTVLQYKKKPMFTTYITLMDRYASRGDVPNAEKIFGMMRKYGYVG 544

Query: 651 RFSQYQSLIQAYLNAKTPAYGMKDRMKADNVFPNKTLAGKLAQVDAFRKTAVSDLLD 707
           R S +Q+LIQAY+NAK PAYGM++RMKAD+VFPNK LAGKLAQVD+ +   VSDLLD
Sbjct: 545 RLSHFQTLIQAYVNAKAPAYGMRERMKADSVFPNKALAGKLAQVDSLKMREVSDLLD 601

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PPR44_ARATH6.7e-14961.30Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidop... [more]
PP135_ARATH6.2e-14761.30Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidop... [more]
PP234_ARATH2.3e-13354.57Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidop... [more]
PPR19_ARATH3.0e-3225.42Pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Arabidop... [more]
PPR86_ARATH6.7e-3225.60Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0LFG6_CUCSA1.0e-18076.32Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819890 PE=4 SV=1[more]
A0A0A0LFG6_CUCSA3.3e-6270.30Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819890 PE=4 SV=1[more]
A0A0A0LEU5_CUCSA6.6e-7940.84Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819910 PE=4 SV=1[more]
E5GBN7_CUCME2.4e-6570.30DNA-binding protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0LFH0_CUCSA2.2e-6671.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819940 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659085107|ref|XP_008443247.1|7.1e-18375.72PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-... [more]
gi|659085107|ref|XP_008443247.1|2.8e-8642.01PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-... [more]
gi|449437710|ref|XP_004136634.1|4.7e-6270.30PREDICTED: pentatricopeptide repeat-containing protein At1g15480, mitochondrial-... [more]
gi|659085117|ref|XP_008443254.1|3.5e-6570.30PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-... [more]
gi|659085109|ref|XP_008443248.1|9.8e-6842.47PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0046686 response to cadmium ion
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla002872Cla002872.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 340..370
score: 0.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 548..578
score: 3.3E-4coord: 340..373
score: 2.6E-5coord: 618..647
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 579..614
score: 8.002coord: 544..578
score: 9.076coord: 615..649
score: 8.353coord: 407..441
score: 7.224coord: 442..472
score: 6.434coord: 338..372
score:
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 522..640
score: 1.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 103..689
score: 6.0E
NoneNo IPR availablePANTHERPTHR24015:SF26SUBFAMILY NOT NAMEDcoord: 103..689
score: 6.0E