Cla002867 (gene) Watermelon (97103) v1

Overview
NameCla002867
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionWerner Syndrome-like exonuclease (AHRD V1 **-- WEX_ARATH); contains Interpro domain(s) IPR002562 3'-5' exonuclease
LocationChr10 : 22429303 .. 22429824 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCACATTTGGATCTCCAATATCCTTCAACTCCAACGCCGCCGCCTCCGCCCTCTCGTCGTCGGTCTCGACATTGAGTGGCATCCTAACTTCATTAACGCTAACCCTAACCACGTCGCCATTTTGCAGCTCTGCGTTGGCCGCCGCTGCCTCATCTTCCAACTCATCCACTCCCTGACTATACCTCAGTCTTTGATCGATTTCTTGTATGACGGATCCTTCTCTTTCGTTGGCGTCGGAATCCGCCAGGACGCTCAAAAGCTCTACGACTGCTACGGGCTGAGTGTTACCAACATTGTGGATCTTAGGGAGTTGGCTGCCAATAAGATGGGGAGAACAGACCTGAGAACTGCGGGACTGAAGAGTCTAGGGATAGCGGTTCTCGGGAGGGAGATGGATAAGCCGAAAAATGTGACTCTGAGTCAACGGGATTGCGAACGGCTGGATCATTCTCAGGTACTCTATGCTACTATTGATGCTTTTATGTCATTTGAGATTGAAAGAAATCTCATGAGTTGA

mRNA sequence

ATGGTCCACATTTGGATCTCCAATATCCTTCAACTCCAACGCCGCCGCCTCCGCCCTCTCGTCGTCGGTCTCGACATTGAGTGGCATCCTAACTTCATTAACGCTAACCCTAACCACGTCGCCATTTTGCAGCTCTGCGTTGGCCGCCGCTGCCTCATCTTCCAACTCATCCACTCCCTGACTATACCTCAGTCTTTGATCGATTTCTTGTATGACGGATCCTTCTCTTTCGTTGGCGTCGGAATCCGCCAGGACGCTCAAAAGCTCTACGACTGCTACGGGCTGAGTGTTACCAACATTGTGGATCTTAGGGAGTTGGCTGCCAATAAGATGGGGAGAACAGACCTGAGAACTGCGGGACTGAAGAGTCTAGGGATAGCGGTTCTCGGGAGGGAGATGGATAAGCCGAAAAATGTGACTCTGAGTCAACGGGATTGCGAACGGCTGGATCATTCTCAGGTACTCTATGCTACTATTGATGCTTTTATGTCATTTGAGATTGAAAGAAATCTCATGAGTTGA

Coding sequence (CDS)

ATGGTCCACATTTGGATCTCCAATATCCTTCAACTCCAACGCCGCCGCCTCCGCCCTCTCGTCGTCGGTCTCGACATTGAGTGGCATCCTAACTTCATTAACGCTAACCCTAACCACGTCGCCATTTTGCAGCTCTGCGTTGGCCGCCGCTGCCTCATCTTCCAACTCATCCACTCCCTGACTATACCTCAGTCTTTGATCGATTTCTTGTATGACGGATCCTTCTCTTTCGTTGGCGTCGGAATCCGCCAGGACGCTCAAAAGCTCTACGACTGCTACGGGCTGAGTGTTACCAACATTGTGGATCTTAGGGAGTTGGCTGCCAATAAGATGGGGAGAACAGACCTGAGAACTGCGGGACTGAAGAGTCTAGGGATAGCGGTTCTCGGGAGGGAGATGGATAAGCCGAAAAATGTGACTCTGAGTCAACGGGATTGCGAACGGCTGGATCATTCTCAGGTACTCTATGCTACTATTGATGCTTTTATGTCATTTGAGATTGAAAGAAATCTCATGAGTTGA

Protein sequence

MVHIWISNILQLQRRRLRPLVVGLDIEWHPNFINANPNHVAILQLCVGRRCLIFQLIHSLTIPQSLIDFLYDGSFSFVGVGIRQDAQKLYDCYGLSVTNIVDLRELAANKMGRTDLRTAGLKSLGIAVLGREMDKPKNVTLSQRDCERLDHSQVLYATIDAFMSFEIERNLMS
Homology
[Close]
BLAST of Cla002867 vs. Swiss-Prot
Match: WEX_ARATH (Werner Syndrome-like exonuclease OS=Arabidopsis thaliana GN=WEX PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-16
Identity = 58/165 (35.15%), Postives = 86/165 (52.12%), Query Frame = 1 

Query: 9   ILQLQRRRLRPLVVGLDIEWHPNFINAN-PNHVAILQLCVGRR-CLIFQLIHSLTIPQSL 68
           +L  +R       VGLDIEW P+F     P  VA +Q+CV    C +  + HS  IPQSL
Sbjct: 117 VLDTKRDESGIAFVGLDIEWRPSFRKGVLPGKVATVQICVDSNYCDVMHIFHS-GIPQSL 176

Query: 69  IDFLYDGSFSFVGVGIRQDAQKLYDCYGLSVTNIVDLRELAANKMGRTDLRTAGLKSLGI 128
              + D +   VG+GI  D+ KL+  YG+S+ ++ DL +LA  K+G    +  GL SL  
Sbjct: 177 QHLIEDSTLVKVGIGIDGDSVKLFHDYGVSIKDVEDLSDLANQKIGGD--KKWGLASLTE 236

Query: 129 AVLGREMDKPKNVTLSQRDCERLDHSQVLYATIDAFMSFEIERNL 172
            ++ +E+ KP  + L   +   L   Q+ YA  DA+ S+ + + L
Sbjct: 237 TLVCKELLKPNRIRLGNWEFYPLSKQQLQYAATDAYASWHLYKVL 278

[Close]
BLAST of Cla002867 vs. Swiss-Prot
Match: WRN_HUMAN (Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-14
Identity = 53/152 (34.87%), Postives = 75/152 (49.34%), Query Frame = 1 

Query: 21  VVGLDIEWHPNFINANPNHVAILQLCVGR-RCLIFQLIHSLTIPQSLIDFLYDGSFSFVG 80
           VVG D+EW P +       VA++QLCV   +C +F +      PQ L   L + +    G
Sbjct: 78  VVGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHVSSMSVFPQGLKMLLENKAVKKAG 137

Query: 81  VGIRQDAQKLYDCYGLSVTNIVDLRELAANKMGRTDLRTAGLKSLGIAVLGREMDKPKNV 140
           VGI  D  KL   + + + N V+L ++A  K+  T+  T  L SL   +LG+++ K K++
Sbjct: 138 VGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCTE--TWSLNSLVKHLLGKQLLKDKSI 197

Query: 141 TLSQRDCERLDHSQVLYATIDAFMSFEIERNL 172
             S      L   Q LYA  DA+  F I RNL
Sbjct: 198 RCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227

[Close]
BLAST of Cla002867 vs. Swiss-Prot
Match: EXD2_HUMAN (Exonuclease 3'-5' domain-containing protein 2 OS=Homo sapiens GN=EXD2 PE=1 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 4.9e-13
Identity = 55/157 (35.03%), Postives = 79/157 (50.32%), Query Frame = 1 

Query: 21  VVGLDIEWHPNFINANPNHVAILQLCV-GRRCLIFQLIHSL----TIPQSLIDFLYDGSF 80
           V+G+D EW      A+P  +++LQ+      C++ +L   +    T+P++L+D L DG+ 
Sbjct: 104 VLGIDCEWVNLEGKASP--LSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTI 163

Query: 81  SFVGVGIRQDAQKLYDCYGLSVTNIVDLRELAANKMGRTDLRTAGLKSLGIAVLGREMDK 140
             VGVG  +DA KL   YGL V   +DLR LA  +          LKSL   VL   +DK
Sbjct: 164 LKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDK 223

Query: 141 PKNVTLSQRDCERLDHSQVLYATIDAFMSFEIERNLM 173
              +  S  D E L   QV+YA  DA +S  +  +L+
Sbjct: 224 SLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHLL 258

[Close]
BLAST of Cla002867 vs. Swiss-Prot
Match: EXD2_MOUSE (Exonuclease 3'-5' domain-containing protein 2 OS=Mus musculus GN=Exd2 PE=1 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 3.2e-12
Identity = 54/157 (34.39%), Postives = 77/157 (49.04%), Query Frame = 1 

Query: 21  VVGLDIEWHPNFINANPNHVAILQLCVGRR-CLIFQLIHSL----TIPQSLIDFLYDGSF 80
           V+G+D EW      A+P  +++LQ+      C + +L   +    T+P++L+D L DG+ 
Sbjct: 133 VLGIDCEWVNLEGKASP--LSLLQMASPSGFCALVRLPRLIYGGRTLPRTLLDILADGAI 192

Query: 81  SFVGVGIRQDAQKLYDCYGLSVTNIVDLRELAANKMGRTDLRTAGLKSLGIAVLGREMDK 140
             VGVG  +DA KL   YGL V   +DLR LA  +          LKSL   +L   +DK
Sbjct: 193 LKVGVGCSEDANKLLQDYGLIVRGCLDLRYLAMKQGNNILCNGLSLKSLAETILNFPLDK 252

Query: 141 PKNVTLSQRDCERLDHSQVLYATIDAFMSFEIERNLM 173
              +  S  D E L   QV YA  DA +S  +  +L+
Sbjct: 253 SLLLRCSNWDAENLTEDQVTYAARDAQISVALFLHLL 287

[Close]
BLAST of Cla002867 vs. Swiss-Prot
Match: WRN_XENLA (Werner syndrome ATP-dependent helicase homolog OS=Xenopus laevis GN=wrn PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.5e-11
Identity = 48/152 (31.58%), Postives = 68/152 (44.74%), Query Frame = 1 

Query: 21  VVGLDIEWHPNFINANPNHVAILQLCVG-RRCLIFQLIHSLTIPQSLIDFLYDGSFSFVG 80
           V+G DIEW P +       VA++Q+CV  ++C +F +      P+ L   L D S   VG
Sbjct: 72  VLGFDIEWPPVYTKGKTGKVALIQVCVSEKKCYLFHISPMAGFPKGLKRLLEDESVRKVG 131

Query: 81  VGIRQDAQKLYDCYGLSVTNIVDLRELAANKMGRTDLRTAGLKSLGIAVLGREMDKPKNV 140
           VGI  D  KL   Y L +   ++L E+A  K+   +  T     L   +   ++ K K+ 
Sbjct: 132 VGIEGDQWKLMSDYELKLKGFIELSEMANQKLRCKEKWT--FNGLIKHLFKEQLYKRKSY 191

Query: 141 TLSQRDCERLDHSQVLYATIDAFMSFEIERNL 172
             S  D   L   Q LYA  DA+    I + L
Sbjct: 192 RCSNWDIFLLTEDQKLYAATDAYAGLLIYKKL 221

[Close]
BLAST of Cla002867 vs. TrEMBL
Match: A0A0A0LFG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819840 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.8e-53
Identity = 107/173 (61.85%), Postives = 137/173 (79.19%), Query Frame = 1 

Query: 1   MVHIWISNILQLQRRRLRPLVVGLDIEWHPNFINANPNHVAILQLCVGRRCLIFQLIHSL 60
           +V+ W++ IL++  RR+RPL+VGLDIEW P F    PN VA LQLCVG RCLIFQL++  
Sbjct: 39  VVNFWVATILEVNNRRIRPLIVGLDIEWRPYF-GPKPNPVATLQLCVGHRCLIFQLLYCP 98

Query: 61  TIPQSLIDFLYDGSFSFVGVGIRQDAQKLYDCYGLSVTNIVDLRELAANKMGRTDLRTAG 120
             PQ+L++FL+D S +FVGVGI QD QKLY  YGL+V+N+VDLR+LA NK+GRT LR AG
Sbjct: 99  AAPQALVNFLFDSSCTFVGVGIHQDVQKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAG 158

Query: 121 LKSLGIAVLGREMDKPKNVTLSQRDCERLDHSQVLYATIDAFMSFEIERNLMS 174
           LKSL   VLGRE++KPK +TLS  D   L+++Q+LYATIDAF+SFEI R+LM+
Sbjct: 159 LKSLWREVLGREIEKPKYITLSNWDSVWLNYAQILYATIDAFISFEIGRSLMN 210

[Close]
BLAST of Cla002867 vs. TrEMBL
Match: A0A0A0LHC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819830 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 9.9e-53
Identity = 111/173 (64.16%), Postives = 134/173 (77.46%), Query Frame = 1 

Query: 1   MVHIWISNILQLQRRRLRPLVVGLDIEWHPNFINANPNHVAILQLCVGRRCLIFQLIHSL 60
           MV +WIS IL++ RRRL  LVVGLD+EW PNF     N VA LQLCVGRRCLIFQLIH+ 
Sbjct: 38  MVDMWISEILRIHRRRLHRLVVGLDVEWRPNFDRHFRNPVATLQLCVGRRCLIFQLIHAS 97

Query: 61  TIPQSLIDFLYDGSFSFVGVGIRQDAQKLYDCYGLSVTNIVDLRELAANKMGRTDLRTAG 120
             PQSLIDFL D +F+FVGVGI  D  KLY+ Y L+V N VDLRELAA++M   + RTAG
Sbjct: 98  ETPQSLIDFLEDDTFTFVGVGIDNDVLKLYNDYDLNVANTVDLRELAADEMQSDEFRTAG 157

Query: 121 LKSLGIAVLGREMDKPKNVTLSQRDCERLDHSQVLYATIDAFMSFEIERNLMS 174
           LK+LG  VLGRE+DKP+NV LS+ D + L+ +Q+LYAT+DAF+SFEI R L+S
Sbjct: 158 LKTLGREVLGREIDKPRNVKLSRWDRQWLNPAQILYATVDAFLSFEIGRYLLS 210

[Close]
BLAST of Cla002867 vs. TrEMBL
Match: A0A103YDM5_CYNCS (3'-5' exonuclease domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_014481 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-42
Identity = 92/172 (53.49%), Postives = 124/172 (72.09%), Query Frame = 1 

Query: 2   VHIWISNILQLQRRRLRPLVVGLDIEWHPNFINANPNHVAILQLCVGRRCLIFQLIHSLT 61
           V  WI+ I ++ RR L  L+VGLD+EW PN    + N VAILQLCVG+RCL+FQ++HS T
Sbjct: 38  VDSWIAEIERIHRRHLHRLIVGLDVEWRPNQSRNSDNPVAILQLCVGKRCLVFQILHSPT 97

Query: 62  IPQSLIDFLYDGSFSFVGVGIRQDAQKLYDCYGLSVTNIVDLRELAANKMGRTDLRTAGL 121
           +P+SL +FL + S++F GVGI  D +KL   Y L V N+ D+R LAA K G  +L+ AGL
Sbjct: 98  VPESLKNFLRNPSYTFAGVGIESDVEKLTVDYNLVVANMADVRALAAVKYGVRELQNAGL 157

Query: 122 KSLGIAVLGREMDKPKNVTLSQRDCERLDHSQVLYATIDAFMSFEIERNLMS 174
           KSL + VLG+E+ KPK VT+S+ D E L  +QV YA+IDAF+SF+I R ++S
Sbjct: 158 KSLTMTVLGKEISKPKGVTMSRWDNEWLTPAQVQYASIDAFLSFKIGRTVIS 209

[Close]
BLAST of Cla002867 vs. TrEMBL
Match: A5AJ51_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011782 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.3e-41
Identity = 96/172 (55.81%), Postives = 122/172 (70.93%), Query Frame = 1 

Query: 1   MVHIWISNILQLQRRRLRPLVVGLDIEWHPNFINAN-PNHVAILQLCVGRRCLIFQLIHS 60
           MV  WI +I  + R RL  L+VGLDIEW PN  NA   N VAILQLCVGRRCLIFQL+++
Sbjct: 34  MVDSWIGDIEHIHRHRLHKLIVGLDIEWRPN--NARYTNPVAILQLCVGRRCLIFQLLYA 93

Query: 61  LTIPQSLIDFLYDGSFSFVGVGIRQDAQKLYDCYGLSVTNIVDLRELAANKMGRTDLRTA 120
             IP SLIDFL D  ++FVGVGI+ D+QKL + + L V N+VDL  LAA  +   +LR A
Sbjct: 94  PEIPTSLIDFLGDTDYTFVGVGIQADSQKLLNDHNLRVGNVVDLAVLAARVLNTRELRNA 153

Query: 121 GLKSLGIAVLGREMDKPKNVTLSQRDCERLDHSQVLYATIDAFMSFEIERNL 172
           G+K L   VLGRE++KPK+V  S+ D + L  +QV YA +DAF+SFE+ R+L
Sbjct: 154 GIKRLAREVLGREVEKPKHVARSRWDTDWLSDAQVHYACVDAFVSFEVGRSL 203

[Close]
BLAST of Cla002867 vs. TrEMBL
Match: V4S8A5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012328mg PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.3e-41
Identity = 92/168 (54.76%), Postives = 124/168 (73.81%), Query Frame = 1 

Query: 5   WISNILQLQRRRLRPLVVGLDIEWHPNFINANPNHVAILQLCVGRRCLIFQLIHSLTIPQ 64
           W+S+I ++ R +L  L+VGLD+EW P+F     N VAI+QLCVGRRCLIFQLIH+ TIP+
Sbjct: 130 WVSDIERVHRNKLPRLIVGLDLEWRPSFSRVQ-NPVAIIQLCVGRRCLIFQLIHAQTIPR 189

Query: 65  SLIDFLYDGSFSFVGVGIRQDAQKLYDCYGLSVT-NIVDLRELAANKMGRTDLRTAGLKS 124
           SL+ FL    +SFVGVGI++D +KL D YG++V  N+V+L  LA ++ GRTDL  AGLK+
Sbjct: 190 SLVGFLSTECYSFVGVGIKKDLEKLEDFYGITVQGNVVELGRLAGDRKGRTDLVNAGLKN 249

Query: 125 LGIAVLGREMDKPKNVTLSQRDCERLDHSQVLYATIDAFMSFEIERNL 172
           L   VLG + +KP+ VT+S+ D   LD +QV YA ID+F+SFE+ R L
Sbjct: 250 LAREVLGLDFEKPRRVTMSRWDKRWLDPAQVQYACIDSFVSFELGRVL 296

[Close]
BLAST of Cla002867 vs. NCBI nr
Match: gi|449437988|ref|XP_004136772.1| (PREDICTED: Werner Syndrome-like exonuclease [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 8.3e-53
Identity = 107/173 (61.85%), Postives = 137/173 (79.19%), Query Frame = 1 

Query: 1   MVHIWISNILQLQRRRLRPLVVGLDIEWHPNFINANPNHVAILQLCVGRRCLIFQLIHSL 60
           +V+ W++ IL++  RR+RPL+VGLDIEW P F    PN VA LQLCVG RCLIFQL++  
Sbjct: 39  VVNFWVATILEVNNRRIRPLIVGLDIEWRPYF-GPKPNPVATLQLCVGHRCLIFQLLYCP 98

Query: 61  TIPQSLIDFLYDGSFSFVGVGIRQDAQKLYDCYGLSVTNIVDLRELAANKMGRTDLRTAG 120
             PQ+L++FL+D S +FVGVGI QD QKLY  YGL+V+N+VDLR+LA NK+GRT LR AG
Sbjct: 99  AAPQALVNFLFDSSCTFVGVGIHQDVQKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAG 158

Query: 121 LKSLGIAVLGREMDKPKNVTLSQRDCERLDHSQVLYATIDAFMSFEIERNLMS 174
           LKSL   VLGRE++KPK +TLS  D   L+++Q+LYATIDAF+SFEI R+LM+
Sbjct: 159 LKSLWREVLGREIEKPKYITLSNWDSVWLNYAQILYATIDAFISFEIGRSLMN 210

[Close]
BLAST of Cla002867 vs. NCBI nr
Match: gi|449437986|ref|XP_004136771.1| (PREDICTED: Werner Syndrome-like exonuclease [Cucumis sativus])

HSP 1 Score: 214.5 bits (545), Expect = 1.4e-52
Identity = 111/173 (64.16%), Postives = 134/173 (77.46%), Query Frame = 1 

Query: 1   MVHIWISNILQLQRRRLRPLVVGLDIEWHPNFINANPNHVAILQLCVGRRCLIFQLIHSL 60
           MV +WIS IL++ RRRL  LVVGLD+EW PNF     N VA LQLCVGRRCLIFQLIH+ 
Sbjct: 38  MVDMWISEILRIHRRRLHRLVVGLDVEWRPNFDRHFRNPVATLQLCVGRRCLIFQLIHAS 97

Query: 61  TIPQSLIDFLYDGSFSFVGVGIRQDAQKLYDCYGLSVTNIVDLRELAANKMGRTDLRTAG 120
             PQSLIDFL D +F+FVGVGI  D  KLY+ Y L+V N VDLRELAA++M   + RTAG
Sbjct: 98  ETPQSLIDFLEDDTFTFVGVGIDNDVLKLYNDYDLNVANTVDLRELAADEMQSDEFRTAG 157

Query: 121 LKSLGIAVLGREMDKPKNVTLSQRDCERLDHSQVLYATIDAFMSFEIERNLMS 174
           LK+LG  VLGRE+DKP+NV LS+ D + L+ +Q+LYAT+DAF+SFEI R L+S
Sbjct: 158 LKTLGREVLGREIDKPRNVKLSRWDRQWLNPAQILYATVDAFLSFEIGRYLLS 210

[Close]
BLAST of Cla002867 vs. NCBI nr
Match: gi|976922811|gb|KVI07167.1| (3'-5' exonuclease domain-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 180.3 bits (456), Expect = 3.0e-42
Identity = 92/172 (53.49%), Postives = 124/172 (72.09%), Query Frame = 1 

Query: 2   VHIWISNILQLQRRRLRPLVVGLDIEWHPNFINANPNHVAILQLCVGRRCLIFQLIHSLT 61
           V  WI+ I ++ RR L  L+VGLD+EW PN    + N VAILQLCVG+RCL+FQ++HS T
Sbjct: 38  VDSWIAEIERIHRRHLHRLIVGLDVEWRPNQSRNSDNPVAILQLCVGKRCLVFQILHSPT 97

Query: 62  IPQSLIDFLYDGSFSFVGVGIRQDAQKLYDCYGLSVTNIVDLRELAANKMGRTDLRTAGL 121
           +P+SL +FL + S++F GVGI  D +KL   Y L V N+ D+R LAA K G  +L+ AGL
Sbjct: 98  VPESLKNFLRNPSYTFAGVGIESDVEKLTVDYNLVVANMADVRALAAVKYGVRELQNAGL 157

Query: 122 KSLGIAVLGREMDKPKNVTLSQRDCERLDHSQVLYATIDAFMSFEIERNLMS 174
           KSL + VLG+E+ KPK VT+S+ D E L  +QV YA+IDAF+SF+I R ++S
Sbjct: 158 KSLTMTVLGKEISKPKGVTMSRWDNEWLTPAQVQYASIDAFLSFKIGRTVIS 209

[Close]
BLAST of Cla002867 vs. NCBI nr
Match: gi|720055138|ref|XP_010273280.1| (PREDICTED: Werner Syndrome-like exonuclease [Nelumbo nucifera])

HSP 1 Score: 178.3 bits (451), Expect = 1.1e-41
Identity = 88/168 (52.38%), Postives = 122/168 (72.62%), Query Frame = 1 

Query: 5   WISNILQLQRRRLRPLVVGLDIEWHPNFINANPNHVAILQLCVGRRCLIFQLIHSLTIPQ 64
           WI+++ +  +  L   +VGLD+EW P+F     N VAILQLCV R+CLIFQL+++  IP 
Sbjct: 88  WITDVQRTHQANLTHFIVGLDVEWRPSFNRTIENKVAILQLCVDRKCLIFQLLYADHIPM 147

Query: 65  SLIDFLYDGSFSFVGVGIRQDAQKLYDCYGLSVTNIVDLRELAANKMGRTDLRTAGLKSL 124
           SLIDFL + +FSFVGVGI +D +KL + Y ++V+N VDLR LA  K+G+ +L+ +GLK L
Sbjct: 148 SLIDFLNNPNFSFVGVGINEDVEKLLEDYEINVSNTVDLRGLAVKKLGKPELKNSGLKDL 207

Query: 125 GIAVLGREMDKPKNVTLSQRDCERLDHSQVLYATIDAFMSFEIERNLM 173
              VLG+EM+KP+ VT+S+ D E L + QV YA +DAF+S EI RNL+
Sbjct: 208 TREVLGKEMEKPRRVTMSRWDTEWLSYDQVQYACLDAFLSSEIGRNLI 255

[Close]
BLAST of Cla002867 vs. NCBI nr
Match: gi|567875787|ref|XP_006430483.1| (hypothetical protein CICLE_v10012328mg [Citrus clementina])

HSP 1 Score: 176.8 bits (447), Expect = 3.3e-41
Identity = 92/168 (54.76%), Postives = 124/168 (73.81%), Query Frame = 1 

Query: 5   WISNILQLQRRRLRPLVVGLDIEWHPNFINANPNHVAILQLCVGRRCLIFQLIHSLTIPQ 64
           W+S+I ++ R +L  L+VGLD+EW P+F     N VAI+QLCVGRRCLIFQLIH+ TIP+
Sbjct: 130 WVSDIERVHRNKLPRLIVGLDLEWRPSFSRVQ-NPVAIIQLCVGRRCLIFQLIHAQTIPR 189

Query: 65  SLIDFLYDGSFSFVGVGIRQDAQKLYDCYGLSVT-NIVDLRELAANKMGRTDLRTAGLKS 124
           SL+ FL    +SFVGVGI++D +KL D YG++V  N+V+L  LA ++ GRTDL  AGLK+
Sbjct: 190 SLVGFLSTECYSFVGVGIKKDLEKLEDFYGITVQGNVVELGRLAGDRKGRTDLVNAGLKN 249

Query: 125 LGIAVLGREMDKPKNVTLSQRDCERLDHSQVLYATIDAFMSFEIERNL 172
           L   VLG + +KP+ VT+S+ D   LD +QV YA ID+F+SFE+ R L
Sbjct: 250 LAREVLGLDFEKPRRVTMSRWDKRWLDPAQVQYACIDSFVSFELGRVL 296

The following BLAST results are available for this feature:
BLAST of Cla002867 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WEX_ARATH1.3e-1635.15Werner Syndrome-like exonuclease OS=Arabidopsis thaliana GN=WEX PE=1 SV=1[more]
WRN_HUMAN2.0e-1434.87Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=2[more]
EXD2_HUMAN4.9e-1335.03Exonuclease 3'-5' domain-containing protein 2 OS=Homo sapiens GN=EXD2 PE=1 SV=2[more]
EXD2_MOUSE3.2e-1234.39Exonuclease 3'-5' domain-containing protein 2 OS=Mus musculus GN=Exd2 PE=1 SV=2[more]
WRN_XENLA3.5e-1131.58Werner syndrome ATP-dependent helicase homolog OS=Xenopus laevis GN=wrn PE=2 SV=... [more]
BLAST of Cla002867 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFG2_CUCSA5.8e-5361.85Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819840 PE=4 SV=1[more]
A0A0A0LHC5_CUCSA9.9e-5364.16Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819830 PE=4 SV=1[more]
A0A103YDM5_CYNCS2.1e-4253.493'-5' exonuclease domain-containing protein OS=Cynara cardunculus var. scolymus ... [more]
A5AJ51_VITVI2.3e-4155.81Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011782 PE=4 SV=1[more]
V4S8A5_9ROSI2.3e-4154.76Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012328mg PE=4 SV=1[more]
BLAST of Cla002867 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437988|ref|XP_004136772.1|8.3e-5361.85PREDICTED: Werner Syndrome-like exonuclease [Cucumis sativus][more]
gi|449437986|ref|XP_004136771.1|1.4e-5264.16PREDICTED: Werner Syndrome-like exonuclease [Cucumis sativus][more]
gi|976922811|gb|KVI07167.1|3.0e-4253.493'-5' exonuclease domain-containing protein [Cynara cardunculus var. scolymus][more]
gi|720055138|ref|XP_010273280.1|1.1e-4152.38PREDICTED: Werner Syndrome-like exonuclease [Nelumbo nucifera][more]
gi|567875787|ref|XP_006430483.1|3.3e-4154.76hypothetical protein CICLE_v10012328mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR012337RNaseH-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:00084083'-5' exonuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006139 nucleobase-containing compound metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla002867Cla002867.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 7..172
score: 2.6
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 3..172
score: 2.0
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 5..169
score: 3.79
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 5..173
score: 3.9