Cla002858 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla002858
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Gun4-like protein (AHRD V1 -- D8RVB0_SELML); contains Interpro domain(s) IPR008629 GUN4-like
Location	Chr8 : 14058122 .. 14058892 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCTTCCCACTCTCTGCCATCTCTCCGCCACTCTCTCCGCCGTCCCCACCACCCTAACCTCTCTCCCACCTCCTTCTCCTCTTCCTCCACTCTCTTCCTCAAACCAACTTCCACCGCCGTCCCCACCACCACTGCCGCCGCCGCTTCCTCTCTCTCCGCCGCAGCCGCCGGTTCCTTCTCTCTCTCCTCCGACACCTCCTCCGCCATCTCTTTTGACGAGCTCGACCGCCTCCTCGCTGCCAAAGACTTTCGGCAGGCCGATGAAGAGACCCGGCGGCTTCTGATCGCCCTTGCCGGCGACGGCGCTCAGAAACGAGGTTACGTCTATTTCTCCGAAGTCCAATTCATCGCTTCCGACGATCTGAAAGCCATTGACGATCTCTGGCAGAAACACAGCGATGGGAAATTCGGGTACAGCGTACAGAAACGGATTTTCGAGAAAGTGAACAAAGATTTCACAAAACTGTTTATGAAACTTGGTTGGATGAAGAAGCTGGATACGGAAATGGAGCAGTACAATTACAGAGCATTTCCGACGGAGTTCATTTGGGAGCTGACGGAGGAGACGCCGGAAGGGCATCTTCCATTGACGAATGCTTTGAGAGGGACACAGTTAATGAGCAACATTCTGAGCCATCCGGCATTTGAGGAGGACGCCATTGAAGAAAAAGGGGAAGAAAAAGTTGCAGGGGAAGAAAATGGAGGATTGAAAAAGGGATTGAAATCGATTAGTGAGAGGATTTTCAAAAGGGATTACAGCTTCTGA

mRNA sequence

ATGGCAGCTTCCCACTCTCTGCCATCTCTCCGCCACTCTCTCCGCCGTCCCCACCACCCTAACCTCTCTCCCACCTCCTTCTCCTCTTCCTCCACTCTCTTCCTCAAACCAACTTCCACCGCCGTCCCCACCACCACTGCCGCCGCCGCTTCCTCTCTCTCCGCCGCAGCCGCCGGTTCCTTCTCTCTCTCCTCCGACACCTCCTCCGCCATCTCTTTTGACGAGCTCGACCGCCTCCTCGCTGCCAAAGACTTTCGGCAGGCCGATGAAGAGACCCGGCGGCTTCTGATCGCCCTTGCCGGCGACGGCGCTCAGAAACGAGGTTACGTCTATTTCTCCGAAGTCCAATTCATCGCTTCCGACGATCTGAAAGCCATTGACGATCTCTGGCAGAAACACAGCGATGGGAAATTCGGGTACAGCGTACAGAAACGGATTTTCGAGAAAGTGAACAAAGATTTCACAAAACTGTTTATGAAACTTGGTTGGATGAAGAAGCTGGATACGGAAATGGAGCAGTACAATTACAGAGCATTTCCGACGGAGTTCATTTGGGAGCTGACGGAGGAGACGCCGGAAGGGCATCTTCCATTGACGAATGCTTTGAGAGGGACACAGTTAATGAGCAACATTCTGAGCCATCCGGCATTTGAGGAGGACGCCATTGAAGAAAAAGGGGAAGAAAAAGTTGCAGGGGAAGAAAATGGAGGATTGAAAAAGGGATTGAAATCGATTAGTGAGAGGATTTTCAAAAGGGATTACAGCTTCTGA

Coding sequence (CDS)

ATGGCAGCTTCCCACTCTCTGCCATCTCTCCGCCACTCTCTCCGCCGTCCCCACCACCCTAACCTCTCTCCCACCTCCTTCTCCTCTTCCTCCACTCTCTTCCTCAAACCAACTTCCACCGCCGTCCCCACCACCACTGCCGCCGCCGCTTCCTCTCTCTCCGCCGCAGCCGCCGGTTCCTTCTCTCTCTCCTCCGACACCTCCTCCGCCATCTCTTTTGACGAGCTCGACCGCCTCCTCGCTGCCAAAGACTTTCGGCAGGCCGATGAAGAGACCCGGCGGCTTCTGATCGCCCTTGCCGGCGACGGCGCTCAGAAACGAGGTTACGTCTATTTCTCCGAAGTCCAATTCATCGCTTCCGACGATCTGAAAGCCATTGACGATCTCTGGCAGAAACACAGCGATGGGAAATTCGGGTACAGCGTACAGAAACGGATTTTCGAGAAAGTGAACAAAGATTTCACAAAACTGTTTATGAAACTTGGTTGGATGAAGAAGCTGGATACGGAAATGGAGCAGTACAATTACAGAGCATTTCCGACGGAGTTCATTTGGGAGCTGACGGAGGAGACGCCGGAAGGGCATCTTCCATTGACGAATGCTTTGAGAGGGACACAGTTAATGAGCAACATTCTGAGCCATCCGGCATTTGAGGAGGACGCCATTGAAGAAAAAGGGGAAGAAAAAGTTGCAGGGGAAGAAAATGGAGGATTGAAAAAGGGATTGAAATCGATTAGTGAGAGGATTTTCAAAAGGGATTACAGCTTCTGA

Protein sequence

MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTSTAVPTTTAAAASSLSAAAAGSFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFIASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAGEENGGLKKGLKSISERIFKRDYSF

Homology

[Close]

BLAST of Cla002858 vs. Swiss-Prot
Match: GUN4C_ARATH (Tetrapyrrole-binding protein, chloroplastic OS=Arabidopsis thaliana GN=GUN4 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-60
Identity = 130/260 (50.00%), Postives = 171/260 (65.77%), Query Frame = 1


Query: 5   HSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTSTAVPTTTAAAASSLSAAAAGSFSLS 64
           HS PS  H     H  NL   S    ++L LK  ++A   +   +ASS S++     ++S
Sbjct: 12  HSSPSYTH-----HRNNLHCQSHFGPTSLSLKQPTSAATFSLICSASSTSSSTTAVSAVS 71

Query: 65  SDTSSAIS------FDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFI 124
           +  +SA +      FD L+  L  ++FRQADEETRRLLI ++G+ A KRGYV+FSEV+ I
Sbjct: 72  TTNASATTAETATIFDVLENHLVNQNFRQADEETRRLLIQISGEAAVKRGYVFFSEVKTI 131

Query: 125 ASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRA 184
           + +DL+AID+LW KHSDG+FGYSVQ++I+ KV KDFT+ F+K+ WMK LDTE+ QYNYRA
Sbjct: 132 SPEDLQAIDNLWIKHSDGRFGYSVQRKIWLKVKKDFTRFFVKVEWMKLLDTEVVQYNYRA 191

Query: 185 FPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAF--EEDAIEEKGEEKVAGEENG 244
           FP EF WEL +ETP GHLPLTNALRGTQL+  +LSHPAF   +D   E  +E   G    
Sbjct: 192 FPDEFKWELNDETPLGHLPLTNALRGTQLLKCVLSHPAFATADDNSGETEDELNRGVAVA 251

Query: 245 GLKKGLKSISERIFKRDYSF 257
             + G+    +R+FK +YSF
Sbjct: 252 KEQAGV-GADKRVFKTNYSF 265

[Close]

BLAST of Cla002858 vs. Swiss-Prot
Match: YCF53_PYRYE (Uncharacterized protein ycf53 OS=Pyropia yezoensis GN=ycf53 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.9e-25
Identity = 61/152 (40.13%), Postives = 93/152 (61.18%), Query Frame = 1


Query: 67  TSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFIASDDLKAI 126
           ++  +++ +L  LL  +D  +AD+ T++ LI LAG  AQ R ++YF++++ I + DL+ I
Sbjct: 93  SAQQMNYKDLQMLLTHRDLLKADQLTQQKLIQLAGVNAQTRNWLYFTDIKKIPAQDLQTI 152

Query: 127 DDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRAFPTEFIWE 186
           D LW  HS GKFG  VQ++I+  V KD+ K + K+GW      E+++   R +P EF W 
Sbjct: 153 DKLWHTHSKGKFGLFVQRQIWLSVGKDWGKFWQKIGW------EVDRIPCR-YPEEFQW- 212

Query: 187 LTEETPEGHLPLTNALRGTQLMSNILSHPAFE 219
                P GHLPL N LRG Q++S + +H A+E
Sbjct: 213 -NSHGPRGHLPLFNQLRGVQVLSALFTHKAWE 235

[Close]

BLAST of Cla002858 vs. Swiss-Prot
Match: YC53L_SYNY3 (Ycf53-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0558 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.9e-24
Identity = 63/161 (39.13%), Postives = 92/161 (57.14%), Query Frame = 1


Query: 59  GSFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFI 118
           G F L S  +  I +  L   L ++DF  ADE TR  L  LAG GA +R ++YF+EV+  
Sbjct: 81  GIFPLQS--AQGIDYLPLQEALGSQDFETADEITRDKLCELAGPGASQRQWLYFTEVEKF 140

Query: 119 ASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRA 178
            + DL  I+ LW  HS+G FG+SVQ+R++    K+FTKL+ K+GW            +  
Sbjct: 141 PALDLHTINALWWLHSNGNFGFSVQRRLWLASGKEFTKLWPKIGW-------KSGNVWTR 200

Query: 179 FPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEE 220
           +P  F W+L+   P+GHLPL N LRG ++  ++  HP + +
Sbjct: 201 WPKGFTWDLS--APQGHLPLLNQLRGVRVAESLYRHPVWSQ 230

[Close]

BLAST of Cla002858 vs. Swiss-Prot
Match: YCF53_PORPU (Uncharacterized protein ycf53 OS=Porphyra purpurea GN=ycf53 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.9e-22
Identity = 56/152 (36.84%), Postives = 91/152 (59.87%), Query Frame = 1


Query: 67  TSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFIASDDLKAI 126
           ++  + + +L  LL   +   AD+ T++ LI LAG   + R ++YF++++ I  +DL+ I
Sbjct: 94  SNKQMDYQDLQILLVQNNLIAADKLTQQKLIKLAGVDEKSRNWLYFTDIKKIPVEDLQTI 153

Query: 127 DDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRAFPTEFIWE 186
           D LW  HS GKFG+ VQ++I+  + K++ + + K+GW      E+ +   R +P EF W 
Sbjct: 154 DQLWNAHSKGKFGFFVQRQIWLALEKNWEQFWYKIGW------EINRVPCR-YPEEFHWN 213

Query: 187 LTEETPEGHLPLTNALRGTQLMSNILSHPAFE 219
            T   P+GHLPL N LRG Q++S + SH A++
Sbjct: 214 ST--GPKGHLPLCNQLRGVQVLSALFSHKAWD 236

[Close]

BLAST of Cla002858 vs. Swiss-Prot
Match: YCF53_CYACA (Uncharacterized protein ycf53 OS=Cyanidium caldarium GN=ycf53 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-21
Identity = 49/142 (34.51%), Postives = 87/142 (61.27%), Query Frame = 1


Query: 73  FDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFIASDDLKAIDDLWQK 132
           ++ L+ LL+A +F +A++ T+++L+ LAG+ +++R ++YF++V  I    +  ++ LW+ 
Sbjct: 102 YETLESLLSANNFFEANKFTQQILLELAGEQSKQRNWMYFTDVHSINHQSVSDLNHLWEL 161

Query: 133 HSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRAFPTEFIWELTEETP 192
           +S G FG+S+QKRI+  VNK++ K + K+GW+           +  +P EF+W +    P
Sbjct: 162 YSQGNFGFSIQKRIWISVNKNWKKFWKKIGWIN------SNSKWLKYPGEFMWAV--NAP 221

Query: 193 EGHLPLTNALRGTQLMSNILSH 215
            GHLPL N LRG  ++  I  +
Sbjct: 222 PGHLPLFNQLRGVYVLEFIFDY 235

[Close]

BLAST of Cla002858 vs. TrEMBL
Match: A0A0A0KCD2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042370 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 1.7e-125
Identity = 235/260 (90.38%), Postives = 246/260 (94.62%), Query Frame = 1


Query: 1   MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTS-TAVPTTTA--AAASSLSAAA 60
           MA SHSLPSLRHSLR PH PNLSPTSFSSSSTLFLKPTS TAV TTT   AA SSLSAAA
Sbjct: 1   MATSHSLPSLRHSLRHPHRPNLSPTSFSSSSTLFLKPTSSTAVTTTTTTTAATSSLSAAA 60

Query: 61  AGSFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQF 120
           AGSFSLSSDTSSAISFDELDRLL AKDFRQADEETRRLLIALAG+GA KRGYVYFSEVQF
Sbjct: 61  AGSFSLSSDTSSAISFDELDRLLGAKDFRQADEETRRLLIALAGEGALKRGYVYFSEVQF 120

Query: 121 IASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYR 180
           IA++DLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTE+EQYNYR
Sbjct: 121 IAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYR 180

Query: 181 AFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAG-EENG 240
           AFPTEFIWELTE+TPEGHLPLTNALRGT+LMSNIL+HPAF E+AIEEKGEEK+AG  ENG
Sbjct: 181 AFPTEFIWELTEDTPEGHLPLTNALRGTRLMSNILNHPAFGEEAIEEKGEEKIAGVVENG 240

Query: 241 GLKKGLKSISERIFKRDYSF 257
           GLKKGLKSI+ER+FKRDYSF
Sbjct: 241 GLKKGLKSITERLFKRDYSF 260

[Close]

BLAST of Cla002858 vs. TrEMBL
Match: A0A068UNL3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00030601001 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 5.0e-77
Identity = 158/272 (58.09%), Postives = 200/272 (73.53%), Query Frame = 1


Query: 3   ASHSLPSLRH----SLRRPHHPNLSPTSFSSSSTLFLKPTSTAVPTTTAAAASSLSAAAA 62
           A++   S+ H    SLRR H  +   T+FSS+S+ FLKPT+T    T      SLS +  
Sbjct: 2   ATNYFKSIHHHHHRSLRRRHSIDCPRTTFSSTSSSFLKPTTTKTTNTL-----SLSQSIF 61

Query: 63  GSFSLSSDTSSA---------ISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGY 122
            +FSLSS TS++         ISFD L + L+ KDFRQADEETRRLLI LAG+ AQKRGY
Sbjct: 62  ATFSLSSTTSTSSTTPSTSQTISFDLLQQHLSLKDFRQADEETRRLLIILAGEAAQKRGY 121

Query: 123 VYFSEVQFIASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDT 182
           V+FSEVQFI+ DDL+ ID+LW+K S+ K+GYSVQK+I+ KV++DFTK F+K+GWMKKLDT
Sbjct: 122 VFFSEVQFISEDDLRTIDELWRKSSNDKYGYSVQKKIWNKVSRDFTKFFLKVGWMKKLDT 181

Query: 183 EMEQYNYRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEK 242
           E++QYNYR+FP+EF WE+ +ETPEGHLPLTNALRGTQL++ ILSHPAFE D  EE+ EE 
Sbjct: 182 EVQQYNYRSFPSEFTWEMNDETPEGHLPLTNALRGTQLLNRILSHPAFEGDEEEEEEEEP 241

Query: 243 V---AGEENGGLK--KGLKSISERIFKRDYSF 257
           +    G ENGGL+    +  +S+ IFK DYSF
Sbjct: 242 LIQEKGAENGGLRSSSAIPPLSKNIFKPDYSF 268

[Close]

BLAST of Cla002858 vs. TrEMBL
Match: A0A0D2VM76_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G142800 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 7.2e-76
Identity = 160/264 (60.61%), Postives = 191/264 (72.35%), Query Frame = 1


Query: 1   MAASHSLPSLRHSLRRPHHPNLS--PTSFSSSSTLFLKPTSTAVPTTTAAAASSLSAAAA 60
           MAA+HSL +L H         LS  P      S+ FLKP S++  T+T    SSLS+   
Sbjct: 1   MAATHSLRTLPHHHHSSSFKRLSTPPPPPPPPSSFFLKPPSSSTSTSTTNTLSSLSSTTT 60

Query: 61  GSF---SLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEV 120
            S    + S+ TS AISFD L   L+ ++FRQADEETRRLLI LAG+ AQKRGYV+FSEV
Sbjct: 61  FSLPSSTTSTTTSQAISFDTLQHHLSNQNFRQADEETRRLLILLAGEAAQKRGYVFFSEV 120

Query: 121 QFIASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYN 180
           QFI+ +DLKAID+LW+KHSD KFGYSVQKR ++KV KDFTKLF+KLGWMKKLDTE+EQYN
Sbjct: 121 QFISQNDLKAIDELWKKHSDNKFGYSVQKRQWQKVKKDFTKLFLKLGWMKKLDTEIEQYN 180

Query: 181 YRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAGEEN 240
           YRAFP EFIWEL +ETPEGHLPLTNALRGTQL ++ILSHPAFE        EE+    EN
Sbjct: 181 YRAFPDEFIWELNDETPEGHLPLTNALRGTQLFNSILSHPAFEGQ------EEEAETGEN 240

Query: 241 GG--LKKG-LKSISERIFKRDYSF 257
           GG  ++ G  K +S + FK +YSF
Sbjct: 241 GGVTVRDGTTKPLSNKFFKPNYSF 258

[Close]

BLAST of Cla002858 vs. TrEMBL
Match: A5BEZ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00310 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 8.0e-75
Identity = 158/275 (57.45%), Postives = 201/275 (73.09%), Query Frame = 1


Query: 3   ASHSLPSL---RHSLRRPHHPNLS--PTSFSSSSTLFLKPTS-----------TAVPTTT 62
           A++SL SL    H L+  HH ++   P++FSS   LFLKPT+           T  PT T
Sbjct: 2   ATNSLQSLSNHHHLLKHYHHHSIESHPSTFSS---LFLKPTTNTNTTNLSHTLTTPPTAT 61

Query: 63  AAAASSLSAAAAGSFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQK 122
                +LS+  +   S +  TS AIS+D L + L++K++RQADEETRRLLI LAG+ A K
Sbjct: 62  TTTPFALSSTTS---STTPSTSQAISYDVLQQHLSSKNYRQADEETRRLLIVLAGEAAVK 121

Query: 123 RGYVYFSEVQFIASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKK 182
           RGYV+FSEVQFI   DLKAID+LW++HS+ KFGYSVQ+RI+EKVNKDF++ F+K+GWMKK
Sbjct: 122 RGYVFFSEVQFIPEADLKAIDELWRQHSNNKFGYSVQRRIWEKVNKDFSRFFLKVGWMKK 181

Query: 183 LDTEMEQYNYRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFE--EDAIEE 242
           LDTE+EQYNYRAFPTEF+WELT++TPEGHLPLTNALRGTQL++ +L HPAF+  E+  EE
Sbjct: 182 LDTEVEQYNYRAFPTEFMWELTDDTPEGHLPLTNALRGTQLLNCLLGHPAFQGNEEEEEE 241

Query: 243 KGEEKVAGEENGG---LKKGLKSISERIFKRDYSF 257
             EEK  G  NGG   L+ G K +S+ +FK DYSF
Sbjct: 242 VAEEK--GSVNGGLGVLRDGSKPLSKSVFKPDYSF 268

[Close]

BLAST of Cla002858 vs. TrEMBL
Match: B9HH58_POPTR (Tetrapyrrole-binding family protein OS=Populus trichocarpa GN=POPTR_0007s02000g PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 8.8e-74
Identity = 159/270 (58.89%), Postives = 196/270 (72.59%), Query Frame = 1


Query: 1   MAASHSLPSLRHSLRRPHHPNLS--PTSFSSSSTLFLKPTSTAVPTTTAAAASSLSAAAA 60
           MAA++SL SL H     HH  L   P+  S  S+LFLKPT T++ T T  + S   +   
Sbjct: 1   MAATNSLQSLHH-----HHSLLKFLPSDTSPPSSLFLKPT-TSISTATNISLSLSISTTT 60

Query: 61  GSFSLSSDTSSA------ISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYF 120
            ++S+S  TS+A       S + L + L+ ++FR+ADEETRRLLI LAG+ AQKRGYV+F
Sbjct: 61  TAYSISPATSTAPSTSKTFSLNLLQQHLSNQNFREADEETRRLLIVLAGEAAQKRGYVFF 120

Query: 121 SEVQFIASDDLKAIDDLWQKHSDGKFGYSVQKRIF-EKVNKDFTKLFMKLGWMKKLDTEM 180
           SEVQFI   DLK ID+LW+K+S+ KFGYSVQKRI+ +K NKDFTK F+K+GWMKKLDTE+
Sbjct: 121 SEVQFIPEQDLKDIDELWKKYSNNKFGYSVQKRIWRQKGNKDFTKFFIKVGWMKKLDTEV 180

Query: 181 EQYNYRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVA 240
           EQYNYR+FP EFIWEL ++TPEGHLPLTNALRG QL+ NILSHPAFE D   E  E+KV 
Sbjct: 181 EQYNYRSFPNEFIWELNDDTPEGHLPLTNALRGIQLLKNILSHPAFEVDG--EVEEDKVE 240

Query: 241 GEENGGLKKGLKS-----ISERIFKRDYSF 257
           G ENGGL KGL+      +S R+FK DYSF
Sbjct: 241 GNENGGL-KGLRDSSKPPLSNRVFKTDYSF 261

[Close]

BLAST of Cla002858 vs. NCBI nr
Match: gi|659089894|ref|XP_008445737.1| (PREDICTED: tetrapyrrole-binding protein, chloroplastic [Cucumis melo])

HSP 1 Score: 472.2 bits (1214), Expect = 5.6e-130
Identity = 239/257 (93.00%), Postives = 248/257 (96.50%), Query Frame = 1


Query: 1   MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTSTA-VPTTTAAAASSLSAAAAG 60
           MAASHSLPSLR SLR PH PNLSPTSFSSSSTLFLKP STA V TTT AA SSLSAAAAG
Sbjct: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAG 60

Query: 61  SFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFIA 120
           SFSLSSDTSSAISFDELDRLLAAKDFR+ADEETRRLLIALAGDGA KRGYVYFSEVQFIA
Sbjct: 61  SFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIA 120

Query: 121 SDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRAF 180
           ++DLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTE+EQYNYRAF
Sbjct: 121 AEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAF 180

Query: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAGEENGGLK 240
           PTEFIWELTEETPEGHLPLTNALRGTQLMSNIL+HPAFEEDAIEEKGEEK+AG+ENGGLK
Sbjct: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLK 240

Query: 241 KGLKSISERIFKRDYSF 257
           KGLKSI+ER+FKRDYSF
Sbjct: 241 KGLKSITERLFKRDYSF 257

[Close]

BLAST of Cla002858 vs. NCBI nr
Match: gi|449446253|ref|XP_004140886.1| (PREDICTED: tetrapyrrole-binding protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 456.8 bits (1174), Expect = 2.4e-125
Identity = 235/260 (90.38%), Postives = 246/260 (94.62%), Query Frame = 1


Query: 1   MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTS-TAVPTTTA--AAASSLSAAA 60
           MA SHSLPSLRHSLR PH PNLSPTSFSSSSTLFLKPTS TAV TTT   AA SSLSAAA
Sbjct: 1   MATSHSLPSLRHSLRHPHRPNLSPTSFSSSSTLFLKPTSSTAVTTTTTTTAATSSLSAAA 60

Query: 61  AGSFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQF 120
           AGSFSLSSDTSSAISFDELDRLL AKDFRQADEETRRLLIALAG+GA KRGYVYFSEVQF
Sbjct: 61  AGSFSLSSDTSSAISFDELDRLLGAKDFRQADEETRRLLIALAGEGALKRGYVYFSEVQF 120

Query: 121 IASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYR 180
           IA++DLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTE+EQYNYR
Sbjct: 121 IAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYR 180

Query: 181 AFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAG-EENG 240
           AFPTEFIWELTE+TPEGHLPLTNALRGT+LMSNIL+HPAF E+AIEEKGEEK+AG  ENG
Sbjct: 181 AFPTEFIWELTEDTPEGHLPLTNALRGTRLMSNILNHPAFGEEAIEEKGEEKIAGVVENG 240

Query: 241 GLKKGLKSISERIFKRDYSF 257
           GLKKGLKSI+ER+FKRDYSF
Sbjct: 241 GLKKGLKSITERLFKRDYSF 260

[Close]

BLAST of Cla002858 vs. NCBI nr
Match: gi|661886346|emb|CDP10036.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 295.8 bits (756), Expect = 7.2e-77
Identity = 158/272 (58.09%), Postives = 200/272 (73.53%), Query Frame = 1


Query: 3   ASHSLPSLRH----SLRRPHHPNLSPTSFSSSSTLFLKPTSTAVPTTTAAAASSLSAAAA 62
           A++   S+ H    SLRR H  +   T+FSS+S+ FLKPT+T    T      SLS +  
Sbjct: 2   ATNYFKSIHHHHHRSLRRRHSIDCPRTTFSSTSSSFLKPTTTKTTNTL-----SLSQSIF 61

Query: 63  GSFSLSSDTSSA---------ISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGY 122
            +FSLSS TS++         ISFD L + L+ KDFRQADEETRRLLI LAG+ AQKRGY
Sbjct: 62  ATFSLSSTTSTSSTTPSTSQTISFDLLQQHLSLKDFRQADEETRRLLIILAGEAAQKRGY 121

Query: 123 VYFSEVQFIASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDT 182
           V+FSEVQFI+ DDL+ ID+LW+K S+ K+GYSVQK+I+ KV++DFTK F+K+GWMKKLDT
Sbjct: 122 VFFSEVQFISEDDLRTIDELWRKSSNDKYGYSVQKKIWNKVSRDFTKFFLKVGWMKKLDT 181

Query: 183 EMEQYNYRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEK 242
           E++QYNYR+FP+EF WE+ +ETPEGHLPLTNALRGTQL++ ILSHPAFE D  EE+ EE 
Sbjct: 182 EVQQYNYRSFPSEFTWEMNDETPEGHLPLTNALRGTQLLNRILSHPAFEGDEEEEEEEEP 241

Query: 243 V---AGEENGGLK--KGLKSISERIFKRDYSF 257
           +    G ENGGL+    +  +S+ IFK DYSF
Sbjct: 242 LIQEKGAENGGLRSSSAIPPLSKNIFKPDYSF 268

[Close]

BLAST of Cla002858 vs. NCBI nr
Match: gi|502148951|ref|XP_004507334.1| (PREDICTED: tetrapyrrole-binding protein, chloroplastic [Cicer arietinum])

HSP 1 Score: 294.7 bits (753), Expect = 1.6e-76
Identity = 155/259 (59.85%), Postives = 197/259 (76.06%), Query Frame = 1


Query: 3   ASHSLPSLRH-SLRRPHHPNLSPTSFSSSSTLFLKPTSTAVPTTTAAAASS-LSAAAAGS 62
           A++SL S++H SL + H+        + SS+LFLKPT+     T + ++S+  S+ +  +
Sbjct: 2   ATNSLHSIQHHSLSKRHYYPSETVPSTLSSSLFLKPTTINTSITISHSSSTTFSSLSQTT 61

Query: 63  FSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFIAS 122
            S  S TS  ISF+ L +LL AK+F+QADEETRRL+I LAG+ AQKRGYV+FSEVQFI+ 
Sbjct: 62  SSTPSSTSQIISFELLQQLLKAKNFQQADEETRRLIIVLAGEAAQKRGYVFFSEVQFISE 121

Query: 123 DDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRAFP 182
            DLK ID LW++HSD KFGYSVQKRIF KV KDFTK F+K+GWMKKLDTEMEQ+NYR+FP
Sbjct: 122 TDLKTIDQLWREHSDNKFGYSVQKRIFGKVKKDFTKFFIKVGWMKKLDTEMEQHNYRSFP 181

Query: 183 TEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAGEENG---G 242
           TEFIWEL ++TPEGHLPLTNALRGTQL++NI +HPAF+E    ++GE  + GEENG   G
Sbjct: 182 TEFIWELNDDTPEGHLPLTNALRGTQLLNNIFTHPAFDE---VQEGEVSI-GEENGALKG 241

Query: 243 LKKGLKSISERIFKRDYSF 257
           LK   K + ++IFK DYSF
Sbjct: 242 LKDSSKPLVQKIFKTDYSF 256

[Close]

BLAST of Cla002858 vs. NCBI nr
Match: gi|823242937|ref|XP_012454133.1| (PREDICTED: tetrapyrrole-binding protein, chloroplastic [Gossypium raimondii])

HSP 1 Score: 292.0 bits (746), Expect = 1.0e-75
Identity = 160/264 (60.61%), Postives = 191/264 (72.35%), Query Frame = 1


Query: 1   MAASHSLPSLRHSLRRPHHPNLS--PTSFSSSSTLFLKPTSTAVPTTTAAAASSLSAAAA 60
           MAA+HSL +L H         LS  P      S+ FLKP S++  T+T    SSLS+   
Sbjct: 1   MAATHSLRTLPHHHHSSSFKRLSTPPPPPPPPSSFFLKPPSSSTSTSTTNTLSSLSSTTT 60

Query: 61  GSF---SLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEV 120
            S    + S+ TS AISFD L   L+ ++FRQADEETRRLLI LAG+ AQKRGYV+FSEV
Sbjct: 61  FSLPSSTTSTTTSQAISFDTLQHHLSNQNFRQADEETRRLLILLAGEAAQKRGYVFFSEV 120

Query: 121 QFIASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYN 180
           QFI+ +DLKAID+LW+KHSD KFGYSVQKR ++KV KDFTKLF+KLGWMKKLDTE+EQYN
Sbjct: 121 QFISQNDLKAIDELWKKHSDNKFGYSVQKRQWQKVKKDFTKLFLKLGWMKKLDTEIEQYN 180

Query: 181 YRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAGEEN 240
           YRAFP EFIWEL +ETPEGHLPLTNALRGTQL ++ILSHPAFE        EE+    EN
Sbjct: 181 YRAFPDEFIWELNDETPEGHLPLTNALRGTQLFNSILSHPAFEGQ------EEEAETGEN 240

Query: 241 GG--LKKG-LKSISERIFKRDYSF 257
           GG  ++ G  K +S + FK +YSF
Sbjct: 241 GGVTVRDGTTKPLSNKFFKPNYSF 258

The following BLAST results are available for this feature:

BLAST of Cla002858 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GUN4C_ARATH	1.2e-60	50.00	Tetrapyrrole-binding protein, chloroplastic OS=Arabidopsis thaliana GN=GUN4 PE=1...	[more]
YCF53_PYRYE	2.9e-25	40.13	Uncharacterized protein ycf53 OS=Pyropia yezoensis GN=ycf53 PE=3 SV=1	[more]
YC53L_SYNY3	1.9e-24	39.13	Ycf53-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0558 PE...	[more]
YCF53_PORPU	3.9e-22	36.84	Uncharacterized protein ycf53 OS=Porphyra purpurea GN=ycf53 PE=3 SV=1	[more]
YCF53_CYACA	2.5e-21	34.51	Uncharacterized protein ycf53 OS=Cyanidium caldarium GN=ycf53 PE=3 SV=1	[more]

BLAST of Cla002858 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCD2_CUCSA	1.7e-125	90.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042370 PE=4 SV=1	[more]
A0A068UNL3_COFCA	5.0e-77	58.09	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00030601001 PE=4 SV=1	[more]
A0A0D2VM76_GOSRA	7.2e-76	60.61	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G142800 PE=4 SV=1	[more]
A5BEZ5_VITVI	8.0e-75	57.45	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00310 PE=4 SV=...	[more]
B9HH58_POPTR	8.8e-74	58.89	Tetrapyrrole-binding family protein OS=Populus trichocarpa GN=POPTR_0007s02000g ...	[more]

BLAST of Cla002858 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089894\|ref\|XP_008445737.1\|	5.6e-130	93.00	PREDICTED: tetrapyrrole-binding protein, chloroplastic [Cucumis melo]	[more]
gi\|449446253\|ref\|XP_004140886.1\|	2.4e-125	90.38	PREDICTED: tetrapyrrole-binding protein, chloroplastic [Cucumis sativus]	[more]
gi\|661886346\|emb\|CDP10036.1\|	7.2e-77	58.09	unnamed protein product [Coffea canephora]	[more]
gi\|502148951\|ref\|XP_004507334.1\|	1.6e-76	59.85	PREDICTED: tetrapyrrole-binding protein, chloroplastic [Cicer arietinum]	[more]
gi\|823242937\|ref\|XP_012454133.1\|	1.0e-75	60.61	PREDICTED: tetrapyrrole-binding protein, chloroplastic [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008629	GUN4-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0030154	cell differentiation
biological_process	GO:0010019	chloroplast-nucleus signaling pathway
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0019899	enzyme binding
molecular_function	GO:0046906	tetrapyrrole binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla002858	Cla002858.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008629	GUN4-like	PFAM	PF05419	GUN4	coord: 68..215 score: 1.4
None	No IPR available	PANTHER	PTHR34800	FAMILY NOT NAMED	coord: 1..256 score: 1.4E
None	No IPR available	PANTHER	PTHR34800:SF1	TETRAPYRROLE-BINDING PROTEIN, CHLOROPLASTIC	coord: 1..256 score: 1.4E
None	No IPR available	unknown	SSF140869	GUN4-like	coord: 69..219 score: 1.11

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla002858	Cla97C08G147680	Watermelon (97103) v2	wmwmbB106
Cla002858	MELO3C011657	Melon (DHL92) v3.5.1	mewmB305
Cla002858	ClCG08G004640	Watermelon (Charleston Gray)	wcgwmB405
Cla002858	Bhi04G001622	Wax gourd	wgowmB324

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla002858	Melon (DHL92) v3.5.1	mewmB313
Cla002858	Bottle gourd (USVL1VR-Ls)	lsiwmB474