Cla002789 (gene) Watermelon (97103) v1

Overview
NameCla002789
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr3 : 10865918 .. 10866262 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTTGGGAAGGTTGGGAAGATGGAAGTTGGGAGGTTTGGGGAGTGGAAGGTAGGGGTTAGGAAGGTTTGGAAGGTGGAGGTTGGGAGGTTTGCGGAGTTGGTTAAGAAGGTTTGGAAGGTGGAGGTTGGAAGGTTTGGGGAGTTGGTTGAGGAGGTTTGGAAGGTGGAGGTTGGGAGGTTTGCGGAGTTGGTTAAGAAGGTTTGGAAGGTGGAGGTTGGAAGGTTTGGGGAGTTGGTTGAGGAGGTTTGGAAGGTGGAGGTTGGGAGGTTTGCGGAGTTGGTTAAGAAGGTTTGGAAGGTGGAGGTTGGAAGGTTTGGGGAGTTGGTTGAGGAGGTTTGA

mRNA sequence

ATGAAGGTTGGGAAGGTTGGGAAGATGGAAGTTGGGAGGTTTGGGGAGTGGAAGGTAGGGGTTAGGAAGGTTTGGAAGGTGGAGGTTGGGAGGTTTGCGGAGTTGGTTAAGAAGGTTTGGAAGGTGGAGGTTGGAAGGTTTGGGGAGTTGGTTGAGGAGGTTTGGAAGGTGGAGGTTGGGAGGTTTGCGGAGTTGGTTAAGAAGGTTTGGAAGGTGGAGGTTGGAAGGTTTGGGGAGTTGGTTGAGGAGGTTTGGAAGGTGGAGGTTGGGAGGTTTGCGGAGTTGGTTAAGAAGGTTTGGAAGGTGGAGGTTGGAAGGTTTGGGGAGTTGGTTGAGGAGGTTTGA

Coding sequence (CDS)

ATGAAGGTTGGGAAGGTTGGGAAGATGGAAGTTGGGAGGTTTGGGGAGTGGAAGGTAGGGGTTAGGAAGGTTTGGAAGGTGGAGGTTGGGAGGTTTGCGGAGTTGGTTAAGAAGGTTTGGAAGGTGGAGGTTGGAAGGTTTGGGGAGTTGGTTGAGGAGGTTTGGAAGGTGGAGGTTGGGAGGTTTGCGGAGTTGGTTAAGAAGGTTTGGAAGGTGGAGGTTGGAAGGTTTGGGGAGTTGGTTGAGGAGGTTTGGAAGGTGGAGGTTGGGAGGTTTGCGGAGTTGGTTAAGAAGGTTTGGAAGGTGGAGGTTGGAAGGTTTGGGGAGTTGGTTGAGGAGGTTTGA

Protein sequence

MKVGKVGKMEVGRFGEWKVGVRKVWKVEVGRFAELVKKVWKVEVGRFGELVEEVWKVEVGRFAELVKKVWKVEVGRFGELVEEVWKVEVGRFAELVKKVWKVEVGRFGELVEEV
Homology
[Close]
BLAST of Cla002789 vs. TrEMBL
Match: N9XAW0_9CLOT (Uncharacterized protein OS=Hungatella hathewayi 12489931 GN=HMPREF1093_04521 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 8.9e-10
Identity = 34/91 (37.36%), Postives = 56/91 (61.54%), Query Frame = 1 

Query: 21  VRKVWKVEVGRFAELVKKVWKVEVGRFGELVEEVWKVEVGRFAELVKKVWKVEVGRFGEL 80
           +R + K E+GR   LV+ + K E+G    L++++ K E+GR   L+K + K E+GR   L
Sbjct: 10  IRDIMKEEIGRSENLVQDIIKTEIGGSENLLKDIIKTEIGRSENLLKDIIKTEIGRSENL 69

Query: 81  VEEVWKVEVGRFAELVKKVWKVEVGRFGELV 112
           ++++ K E+GR   L+K + K E+GR   LV
Sbjct: 70  LKDIIKTEIGRSENLLKDIIKTEIGRSENLV 100

[Close]
BLAST of Cla002789 vs. NCBI nr
Match: gi|488675494|ref|WP_002604275.1| (hypothetical protein [Hungatella hathewayi])

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-09
Identity = 34/91 (37.36%), Postives = 56/91 (61.54%), Query Frame = 1 

Query: 21  VRKVWKVEVGRFAELVKKVWKVEVGRFGELVEEVWKVEVGRFAELVKKVWKVEVGRFGEL 80
           +R + K E+GR   LV+ + K E+G    L++++ K E+GR   L+K + K E+GR   L
Sbjct: 10  IRDIMKEEIGRSENLVQDIIKTEIGGSENLLKDIIKTEIGRSENLLKDIIKTEIGRSENL 69

Query: 81  VEEVWKVEVGRFAELVKKVWKVEVGRFGELV 112
           ++++ K E+GR   L+K + K E+GR   LV
Sbjct: 70  LKDIIKTEIGRSENLLKDIIKTEIGRSENLV 100

The following BLAST results are available for this feature:
BLAST of Cla002789 vs. TrEMBL
Match NameE-valueIdentityDescription
N9XAW0_9CLOT8.9e-1037.36Uncharacterized protein OS=Hungatella hathewayi 12489931 GN=HMPREF1093_04521 PE=... [more]
BLAST of Cla002789 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|488675494|ref|WP_002604275.1|1.3e-0937.36hypothetical protein [Hungatella hathewayi][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla002789Cla002789.1mRNA