Cla002746 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla002746
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Serine hydroxymethyltransferase (AHRD V1 **** B9HDQ7_POPTR); contains Interpro domain(s) IPR001085 Serine hydroxymethyltransferase
Location	Chr7 : 590321 .. 593351 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGCTACGAGTGGTGCTGCAGTGATGGGCTCTCTGCAAGTTGCTGTTTGTGCGAAGGGATCGTGTTTTCCTTCACAAGTTTCTAACATCTGTGTGTTTCCACAACACAAGAAAATAAACATACTGAAACCCTGTAAATCCTCTAATATTGAAGCAAGCATGGTTGCAGGGAAGCCATCATCTTCTCTATCTATCACTGTTCCAGAAATTGGAGGTGAAATATTATCTAACTCCATTCACCAATGTTTTGACTTGTTTGAAATAAATTTGGTATATCTGCTTGACCCATGTTAATAAATTTGACCCTCTACTCGGAGGAAAGAAGTGTATAATATTTCTTTTGTTTCTTAATCTTAGATTAGCCAAGTTGGTTCTTGTGAATGAAAAGAATTTAGCTTAGGTTAACTTCATTGTTGTCATGCAGGTGTAAGCCAGTTTGTAGACCATACCTTGAGTGAAATAGATCCTGAAGTTCGAAGTATTATTGACAAAGAAAAGCAGCGACAGTTTAAAAGCCTTGAACTTATTGCCTCAGAGAACTTTACATCTCGGGCAGTTATGGAGGCAGTAGGGTCCTGTCTCACAAATAAGTATTCAGAAGGATTACCTGGAAAAAGGTGAGATTTCTTCATTTGATGTACTATGGATGTGAATTCCAATTCTTTCTTGGGAGGTTTTGAGATTTTGTTGATGTTGAGAGGATTACGCAAATTAAGATTTTTATCATGCATCTCAGGTACTATGGTGGCAATGAACATATCGACGAGCTTGAAACACTCTGTCAGCAAAGGGCTCTAGCAGCATTTCATTTGGACAATAACAAGTGGGGTGTAAATGTTCAACCATTATCTGGTTCACCTGCTAACTTCGAGGTTTATACTGCAATTCTTAATCCACATGATCGGATCATGGTGAGTAGCCTTATGATTTACTTCTTTAATCACTGTGTTAATCTAGACAATTGCTGATGCTACTGATTCATGTTAAATGACTTTAGGGTTTAGACTTGCCTCATGGAGGACATCTGTCTCATGGGTTTATGACACCAAAAAGGCGGGTGTCAGGCACGTCAATTTATTTTGAATCTATGCCTTATCGTCTTGATGAGACTACAGGTACTTCCCATATGTGATACAGTTTTTTTATGGTCTCATCCGTGGTTTATGCATTCTAATTTAGTAGCAAATTCTTGCAGGCATTGTAGACTATGACATGCTTGAAAAAACTGCTAACTTGTTTCGACCAAAGCTGATTATCGCTGGTGCAAGTGCTTATCCACGAGATTTTGACCATCCTCGCATGAGAAAAGTGAGGATTTACCTAAATCCAATGTTGTTCATCATTCTACATTGAGTAGCTCTATTTAGAAAATAAGTAAGTATTAATGAATGACTTGCTTGATTTGATATGGGTAGATTGCCGACGCTGTTGGCGCTTTTCTCATGATGGATATGGCTCACATAAGCGGGCTTGTTGCTGCTTCAGTGGTTGCTGATCCTTTTGAATACTGTGATATTGTGACCACAACAACACACAAGGTAAAAGATAAATTTTGCTAATGGATGCTTCCTTTTGAATTACAGGCTTTCCTCTAAATCCATTTCATTTTTTGAGATAAGAAACGGCAAAAGGGTATTTTCAAGAACCAAACGTAAAAGAGGAACAACCTATCGGCCAAGGTAGAGAAGACTAATTCCAAAACAATTATGCAAGTTAAAATTAATGATGCTTGTACAGTCTCTTTGTGAATGACACTTGTACAAGATCGAAAGAAAAGTTGTAAGAGGTCCTGAACTCTTTGCTTGCCCAAGAGAGCTTCAGGAAGCCAAATATATGGCTTTTCTGGAAAAATAATGGAGATATCAAATTTATTTCATACTTATTTACTTATATTGAATTTTTGTCATTCTCATGTCATTTGCCTTCTCTTAGTTACAACGTATTAGCTTCGTATGTGATTTGGTATGATACTGATTGCTCTTCACATTAAAGAAACTGCTTTCTCAGCCTGAAAGAAATGTCAAATTATTTGCAGTCTCTGAGAGGTCCAAGAGGTGGAATGATCTTCTTCAGGAAGGATCCTGTTCTCGGAGTTGACTTAGAATCTGCTATTAATAATGCTGTGTTCCCAGGACTACAGGTTGGTCCATAGTCTTGTGGTAGCACGTAAAGAATTGATTTGTTTTTCTACATACTTTGTTTTTGGTTCTTAAATATTGTCAATTTAATGGTTATCATACAGGGTGGTCCTCATAATCATACAATTGGGGGACTAGCTGTCTGCTTGAAGCATGCACAATCCCCAGAATTTAAGGTCTACCAAAACAAGGTACTTCATTTCCTCAATGATCTCAACATGGTGTAAGACACTGCTTTCTAATTTTCTAACAGCATACCTCTTCATATATTAGGTCATTTCAAATTGTAGAGCTCTTGCGAGTCGACTTGTCGAGTTAGGTTATAAGCTAGTTTCCGGGGGAAGTGACAATCACCTAGTTCTTGTGGATCTCAGGCCATTGGTAAATCATTGTTCCTCATAAATGTGCTTTCAAATAAGAACGTAAGGAAGCATATGTTAATCTGTAAGTAAACTCTAACGACAGGGTATTGATGGGGCACGGGTGGAGAAAATTCTCGACATGGCCTCAATCACTCTCAACAAGAACTCAGTACCTGGTGATGACTCATGTTTTTAATTGGTTGATCATCATGTCCAATTTTCTCGAACTGATTCTTAGCTGTTTTATTCATAGGTGACAAGAGTGCTTTAGTGCCAGGAGGCATTCGAATTGGGTCGCCTGCCATGACCACCCGAGGATTCACTGAGAAAGAGTTTGTAGCAGTTGCAGACTTCATCCATGAGGGTGTTAAGATAACTCTTGATGCCAAACCCCTGGCCCCAGGATCAAAGCTCCAAGAGTTCCTCAAATTTGTGACAACTTCTGATTTTCCTTTGATCGACCGAGTTTCAGATCTTCGCTCGAGAGTCGAAGCTCTTACCACTCAATTCCCAATACCTGGCCTGTAA

mRNA sequence

ATGCAGGCTACGAGTGGTGCTGCAGTGATGGGCTCTCTGCAAGTTGCTGTTTGTGCGAAGGGATCGTGTTTTCCTTCACAAGTTTCTAACATCTGTGTGTTTCCACAACACAAGAAAATAAACATACTGAAACCCTGTAAATCCTCTAATATTGAAGCAAGCATGGTTGCAGGGAAGCCATCATCTTCTCTATCTATCACTGTTCCAGAAATTGGAGGTGTAAGCCAGTTTGTAGACCATACCTTGAGTGAAATAGATCCTGAAGTTCGAAGTATTATTGACAAAGAAAAGCAGCGACAGTTTAAAAGCCTTGAACTTATTGCCTCAGAGAACTTTACATCTCGGGCAGTTATGGAGGCAGTAGGGTCCTGTCTCACAAATAAGTATTCAGAAGGATTACCTGGAAAAAGGTACTATGGTGGCAATGAACATATCGACGAGCTTGAAACACTCTGTCAGCAAAGGGCTCTAGCAGCATTTCATTTGGACAATAACAAGTGGGGTGTAAATGTTCAACCATTATCTGGTTCACCTGCTAACTTCGAGGTTTATACTGCAATTCTTAATCCACATGATCGGATCATGGGTTTAGACTTGCCTCATGGAGGACATCTGTCTCATGGGTTTATGACACCAAAAAGGCGGGTGTCAGGCACGTCAATTTATTTTGAATCTATGCCTTATCGTCTTGATGAGACTACAGGCATTGTAGACTATGACATGCTTGAAAAAACTGCTAACTTGTTTCGACCAAAGCTGATTATCGCTGGTGCAAGTGCTTATCCACGAGATTTTGACCATCCTCGCATGAGAAAAATTGCCGACGCTGTTGGCGCTTTTCTCATGATGGATATGGCTCACATAAGCGGGCTTGTTGCTGCTTCAGTGGTTGCTGATCCTTTTGAATACTGTGATATTGTGACCACAACAACACACAAGTCTCTGAGAGGTCCAAGAGGTGGAATGATCTTCTTCAGGAAGGATCCTGTTCTCGGAGTTGACTTAGAATCTGCTATTAATAATGCTGTGTTCCCAGGACTACAGGGTGGTCCTCATAATCATACAATTGGGGGACTAGCTGTCTGCTTGAAGCATGCACAATCCCCAGAATTTAAGGTCTACCAAAACAAGGTCATTTCAAATTGTAGAGCTCTTGCGAGTCGACTTGTCGAGTTAGGTTATAAGCTAGTTTCCGGGGGAAGTGACAATCACCTAGTTCTTGTGGATCTCAGGCCATTGGGTATTGATGGGGCACGGGTGGAGAAAATTCTCGACATGGCCTCAATCACTCTCAACAAGAACTCAGTACCTGGTGACAAGAGTGCTTTAGTGCCAGGAGGCATTCGAATTGGGTCGCCTGCCATGACCACCCGAGGATTCACTGAGAAAGAGTTTGTAGCAGTTGCAGACTTCATCCATGAGGGTGTTAAGATAACTCTTGATGCCAAACCCCTGGCCCCAGGATCAAAGCTCCAAGAGTTCCTCAAATTTGTGACAACTTCTGATTTTCCTTTGATCGACCGAGTTTCAGATCTTCGCTCGAGAGTCGAAGCTCTTACCACTCAATTCCCAATACCTGGCCTGTAA

Coding sequence (CDS)

ATGCAGGCTACGAGTGGTGCTGCAGTGATGGGCTCTCTGCAAGTTGCTGTTTGTGCGAAGGGATCGTGTTTTCCTTCACAAGTTTCTAACATCTGTGTGTTTCCACAACACAAGAAAATAAACATACTGAAACCCTGTAAATCCTCTAATATTGAAGCAAGCATGGTTGCAGGGAAGCCATCATCTTCTCTATCTATCACTGTTCCAGAAATTGGAGGTGTAAGCCAGTTTGTAGACCATACCTTGAGTGAAATAGATCCTGAAGTTCGAAGTATTATTGACAAAGAAAAGCAGCGACAGTTTAAAAGCCTTGAACTTATTGCCTCAGAGAACTTTACATCTCGGGCAGTTATGGAGGCAGTAGGGTCCTGTCTCACAAATAAGTATTCAGAAGGATTACCTGGAAAAAGGTACTATGGTGGCAATGAACATATCGACGAGCTTGAAACACTCTGTCAGCAAAGGGCTCTAGCAGCATTTCATTTGGACAATAACAAGTGGGGTGTAAATGTTCAACCATTATCTGGTTCACCTGCTAACTTCGAGGTTTATACTGCAATTCTTAATCCACATGATCGGATCATGGGTTTAGACTTGCCTCATGGAGGACATCTGTCTCATGGGTTTATGACACCAAAAAGGCGGGTGTCAGGCACGTCAATTTATTTTGAATCTATGCCTTATCGTCTTGATGAGACTACAGGCATTGTAGACTATGACATGCTTGAAAAAACTGCTAACTTGTTTCGACCAAAGCTGATTATCGCTGGTGCAAGTGCTTATCCACGAGATTTTGACCATCCTCGCATGAGAAAAATTGCCGACGCTGTTGGCGCTTTTCTCATGATGGATATGGCTCACATAAGCGGGCTTGTTGCTGCTTCAGTGGTTGCTGATCCTTTTGAATACTGTGATATTGTGACCACAACAACACACAAGTCTCTGAGAGGTCCAAGAGGTGGAATGATCTTCTTCAGGAAGGATCCTGTTCTCGGAGTTGACTTAGAATCTGCTATTAATAATGCTGTGTTCCCAGGACTACAGGGTGGTCCTCATAATCATACAATTGGGGGACTAGCTGTCTGCTTGAAGCATGCACAATCCCCAGAATTTAAGGTCTACCAAAACAAGGTCATTTCAAATTGTAGAGCTCTTGCGAGTCGACTTGTCGAGTTAGGTTATAAGCTAGTTTCCGGGGGAAGTGACAATCACCTAGTTCTTGTGGATCTCAGGCCATTGGGTATTGATGGGGCACGGGTGGAGAAAATTCTCGACATGGCCTCAATCACTCTCAACAAGAACTCAGTACCTGGTGACAAGAGTGCTTTAGTGCCAGGAGGCATTCGAATTGGGTCGCCTGCCATGACCACCCGAGGATTCACTGAGAAAGAGTTTGTAGCAGTTGCAGACTTCATCCATGAGGGTGTTAAGATAACTCTTGATGCCAAACCCCTGGCCCCAGGATCAAAGCTCCAAGAGTTCCTCAAATTTGTGACAACTTCTGATTTTCCTTTGATCGACCGAGTTTCAGATCTTCGCTCGAGAGTCGAAGCTCTTACCACTCAATTCCCAATACCTGGCCTGTAA

Protein sequence

MQATSGAAVMGSLQVAVCAKGSCFPSQVSNICVFPQHKKINILKPCKSSNIEASMVAGKPSSSLSITVPEIGGVSQFVDHTLSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPANFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYDMLEKTANLFRPKLIIAGASAYPRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITLDAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL

Homology

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BLAST of Cla002746 vs. Swiss-Prot
Match: GLYP3_ARATH (Serine hydroxymethyltransferase 3, chloroplastic OS=Arabidopsis thaliana GN=SHM3 PE=1 SV=2)

HSP 1 Score: 833.6 bits (2152), Expect = 1.2e-240
Identity = 419/529 (79.21%), Postives = 461/529 (87.15%), Query Frame = 1


Query: 1   MQATSGAAVMGSLQVAVCAKGSCFPSQVSNICVFPQHKKINILKPCKSSNIEASMVAGKP 60
           MQA  G   M SLQ     +GS FP  +  +  F Q  K NI KP +SS ++ ++V+   
Sbjct: 1   MQACCGGNSMASLQQPGRVQGSVFPPIMPPVTKFSQQLKFNISKPFRSSFLKRNLVSEMR 60

Query: 61  SSSLSITVPEIGGVS-QFVDHTLSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVME 120
           +SS+S+   EI      F D+ L E+DPEVR+II KEK RQF+SLELIASENFTSRAVME
Sbjct: 61  ASSVSLPNVEISSKEIPFEDYGLGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAVME 120

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNE+ID+LETLCQ RALAAF LD+ KWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPA 180

Query: 181 NFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDY 240
           NF VYTAIL+PHDRIMGLDLPHGGHLSHGFMT KRRVSGTSIYFESMPYRLDE+TGIVDY
Sbjct: 181 NFAVYTAILSPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDY 240

Query: 241 DMLEKTANLFRPKLIIAGASAYPRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 300
           DMLEKTA LFRPKLIIAGASAY RDFD+PRMRKIAD+VGAFLMMDMAHISGLVAASVVAD
Sbjct: 241 DMLEKTATLFRPKLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVAD 300

Query: 301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGL 360
           PFEYCDIVTTTTHKSLRGPRGGMIFFRKDP+ GVDLESA+NNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPINGVDLESAVNNAVFPGLQGGPHNHTIGGL 360

Query: 361 AVCLKHAQSPEFKVYQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGAR 420
           AVCLKHAQSPEFK YQ +V+SNCRALA+RLVELG+KLVSGGSDNHLVLVDLRP+G+DGAR
Sbjct: 361 AVCLKHAQSPEFKAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGAR 420

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKIT 480
           VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG +EK+FV VADFI EGV+IT
Sbjct: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVEIT 480

Query: 481 LDAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           ++AK  APGSKLQ+F KFVT+ +FPL +RV  L+ RVE  T++FPIPG+
Sbjct: 481 MEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLKERVETFTSRFPIPGV 529

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BLAST of Cla002746 vs. Swiss-Prot
Match: GLYM1_ARATH (Serine hydroxymethyltransferase 1, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 1.8e-159
Identity = 278/454 (61.23%), Postives = 342/454 (75.33%), Query Frame = 1


Query: 82  LSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 141
           L E+DPE+  II+ EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGG
Sbjct: 55  LEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG 114

Query: 142 NEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPANFEVYTAILNPHDRIMGLDLPH 201
           NE+ID  ETLCQ+RAL AF LD  KWGVNVQPLSGSPANF VYTA+L PH+RIM LDLPH
Sbjct: 115 NEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPH 174

Query: 202 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYDMLEKTANLFRPKLIIAGASAY 261
           GGHLSHG+ T  +++S  SI+FE+MPYRLDE+TG +DYD +EK+A LFRPKLI+AGASAY
Sbjct: 175 GGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAY 234

Query: 262 PRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGG 321
            R +D+ R+RK+ +   A ++ DMAHISGLVAA+V+  PF+Y D+VTTTTHKSLRGPRG 
Sbjct: 235 ARLYDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRGPRGA 294

Query: 322 MIFFRK--------DPVLGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 381
           MIFFRK           +  D E  IN AVFPGLQGGPHNHTI GLAV LK A + E+K 
Sbjct: 295 MIFFRKGVKEINKQGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKA 354

Query: 382 YQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARVEKILDMASITLNK 441
           YQ +V+SN    A  L+E GY+LVSGG+DNHLVLV+L+P GIDG+RVEK+L+   I  NK
Sbjct: 355 YQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNK 414

Query: 442 NSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITLDAKPLAPGSKLQE 501
           N+VPGD SA+VPGGIR+G+PA+T+RGF E++F  VA++  + V I L  K  A G+KL++
Sbjct: 415 NTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKD 474

Query: 502 FLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPG 528
           F+  + +S   +   ++ LR  VE    QFP  G
Sbjct: 475 FVSAMESSS-TIQSEIAKLRHEVEEFAKQFPTIG 507

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BLAST of Cla002746 vs. Swiss-Prot
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 3.1e-159
Identity = 279/454 (61.45%), Postives = 342/454 (75.33%), Query Frame = 1


Query: 82  LSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 141
           L  IDPE+  II+ EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGG
Sbjct: 56  LEVIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGG 115

Query: 142 NEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPANFEVYTAILNPHDRIMGLDLPH 201
           NE+ID  ETLCQ+RAL AF LD  KWGVNVQPLSGSP+NF+VYTA+L PHDRIM LDLPH
Sbjct: 116 NEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIMALDLPH 175

Query: 202 GGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYDMLEKTANLFRPKLIIAGASAY 261
           GGHLSHG+ T  +++S  SI+FE+MPYRLDE+TG +DYD LEK+A LFRPKLI+AGASAY
Sbjct: 176 GGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAY 235

Query: 262 PRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGG 321
            R +D+ R+RK+ D   A L+ DMAHISGLVAA V+  PF+Y D+VTTTTHKSLRGPRG 
Sbjct: 236 ARLYDYARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGA 295

Query: 322 MIFFRK--------DPVLGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 381
           MIFFRK           +  D E  IN AVFPGLQGGPHNHTI GLAV LK A +PE++ 
Sbjct: 296 MIFFRKGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRA 355

Query: 382 YQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARVEKILDMASITLNK 441
           YQ +V+SN    A  L E GY LVSGG++NHLVLV+L+  GIDG+RVEK+L++  I  NK
Sbjct: 356 YQEQVLSNSSKFAKALSEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLELVHIAANK 415

Query: 442 NSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITLDAKPLAPGSKLQE 501
           N+VPGD SA+VPGGIR+G+PA+T+RGF E++FV VA++    V + L  K  + G+KL++
Sbjct: 416 NTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKD 475

Query: 502 FLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPG 528
           F++ + TS + +   +S L+  VE    QFP  G
Sbjct: 476 FVEALQTSSY-VQSEISKLKHDVEEFAKQFPTIG 508

[Close]

BLAST of Cla002746 vs. Swiss-Prot
Match: GLYC_NEUCR (Serine hydroxymethyltransferase, cytosolic OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=for PE=3 SV=2)

HSP 1 Score: 562.8 bits (1449), Expect = 4.1e-159
Identity = 280/460 (60.87%), Postives = 350/460 (76.09%), Query Frame = 1


Query: 78  VDHTLSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKR 137
           ++H+L E DP+V  I+ KE QRQ +S+ LIASEN TSRAV +A+GS ++NKYSEGLPG R
Sbjct: 14  LEHSLVESDPQVAEIMKKEVQRQRESIILIASENVTSRAVFDALGSPMSNKYSEGLPGAR 73

Query: 138 YYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPANFEVYTAILNPHDRIMGL 197
           YYGGN+HIDE+E LCQ RAL AFHLD  +WGVNVQ LSGSPAN +VY AI+  H R+MGL
Sbjct: 74  YYGGNQHIDEIEVLCQNRALEAFHLDPKQWGVNVQCLSGSPANLQVYQAIMPVHGRLMGL 133

Query: 198 DLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYDMLEKTANLFRPKLIIAG 257
           DLPHGGHLSHG+ TP+R++S  S YFE+MPYR++  TG++DYD LEK A LFRPK+++AG
Sbjct: 134 DLPHGGHLSHGYQTPQRKISAVSTYFETMPYRVNIDTGLIDYDTLEKNAQLFRPKVLVAG 193

Query: 258 ASAYPRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRG 317
            SAY R  D+ RMRKIAD+VGA+L++DMAHISGL+A+ V+  PF Y D+VTTTTHKSLRG
Sbjct: 194 TSAYCRLIDYERMRKIADSVGAYLVVDMAHISGLIASEVIPSPFLYADVVTTTTHKSLRG 253

Query: 318 PRGGMIFFRK-----DPVLG----VDLESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS 377
           PRG MIFFR+     D   G     DLE  IN +VFPG QGGPHNHTI  LAV LK A S
Sbjct: 254 PRGAMIFFRRGVRSVDAKTGKETLYDLEDKINFSVFPGHQGGPHNHTITALAVALKQAAS 313

Query: 378 PEFKVYQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARVEKILDMAS 437
           PEFK YQ KV++N +AL  +L ELGYKLVS G+D+H+VLVDLRP+G+DGARVE +L+  +
Sbjct: 314 PEFKEYQQKVVANAKALEKKLKELGYKLVSDGTDSHMVLVDLRPIGVDGARVEFLLEQIN 373

Query: 438 ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITLDAKPLAP- 497
           IT NKN+VPGDKSAL PGG+RIG+PAMT+RGF E +F  VA F+ E VK+  + +   P 
Sbjct: 374 ITCNKNAVPGDKSALTPGGLRIGTPAMTSRGFGEADFEKVAVFVDEAVKLCKEIQASLPK 433

Query: 498 -GSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIP 527
             +K ++F   + TSD P   R+++L+  + A +  FP+P
Sbjct: 434 EANKQKDFKAKIATSDIP---RINELKQEIAAWSNTFPLP 470

[Close]

BLAST of Cla002746 vs. Swiss-Prot
Match: GLYM2_ARATH (Serine hydroxymethyltransferase 2, mitochondrial OS=Arabidopsis thaliana GN=SHM2 PE=2 SV=2)

HSP 1 Score: 561.6 bits (1446), Expect = 9.1e-159
Identity = 280/455 (61.54%), Postives = 343/455 (75.38%), Query Frame = 1


Query: 81  TLSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG 140
           +L EIDPEV  II+ EK RQ+K  ELI SENFTS +VM+AVGS +TNKYSEG PG RYYG
Sbjct: 54  SLDEIDPEVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYG 113

Query: 141 GNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPANFEVYTAILNPHDRIMGLDLP 200
           GNE+ID  ETLCQ+RAL AF LD +KWGVNVQ LSGSPANF+VYTA+L PH+RIM LDLP
Sbjct: 114 GNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLP 173

Query: 201 HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYDMLEKTANLFRPKLIIAGASA 260
           HGGHLSHG+ T  +++S  SI+FE+MPYRLDE TG +DYD LEK+A LFRPKLI+AGASA
Sbjct: 174 HGGHLSHGYQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASA 233

Query: 261 YPRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRG 320
           Y R +D+ R+RK+ +   A ++ DMAHISGLVAA V+  PFEY D+VTTTTHKSLRGPRG
Sbjct: 234 YARLYDYARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG 293

Query: 321 GMIFFRK--------DPVLGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 380
            MIFFRK           +  D E  IN AVFPGLQGGPHNHTI GLAV LK A++PE+K
Sbjct: 294 AMIFFRKGLKEINKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYK 353

Query: 381 VYQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARVEKILDMASITLN 440
            YQ++V+ NC   A  L+  GY LVSGG+DNHLVLV+L+  GIDG+RVEK+L++  I  N
Sbjct: 354 AYQDQVLRNCSKFAETLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAAN 413

Query: 441 KNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITLDAKPLAPGSKLQ 500
           KN+VPGD SA+VPGGIR+G+PA+T+RGF E++F  VA++    VKI L  K  + G+KL+
Sbjct: 414 KNTVPGDVSAMVPGGIRMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGTKLK 473

Query: 501 EFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPG 528
           +F+  + +++  L   +S LR  VE    QFP  G
Sbjct: 474 DFVATMQSNE-KLQSEMSKLREMVEEYAKQFPTIG 507

[Close]

BLAST of Cla002746 vs. TrEMBL
Match: A0A0A0KYS6_CUCSA (Serine hydroxymethyltransferase OS=Cucumis sativus GN=Csa_4G062380 PE=3 SV=1)

HSP 1 Score: 1020.8 bits (2638), Expect = 6.1e-295
Identity = 507/528 (96.02%), Postives = 518/528 (98.11%), Query Frame = 1


Query: 1   MQATSGAAVMGSLQVAVCAKGSCFPSQVSNICVFPQHKKINILKPCKSSNIEASMVAGKP 60
           MQATSG AVMGSLQVAVC KGSCFPS+ S+ICVFPQ KK+NILKPCKS  +EASMVAGKP
Sbjct: 1   MQATSGVAVMGSLQVAVCGKGSCFPSKSSSICVFPQQKKMNILKPCKSFKVEASMVAGKP 60

Query: 61  SSSLSITVPEIGGVSQFVDHTLSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEA 120
           SSS+S+TVPEIGGVS FVDH LSE DPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEA
Sbjct: 61  SSSVSVTVPEIGGVSNFVDHALSETDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEA 120

Query: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPAN 180
           VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPAN
Sbjct: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPAN 180

Query: 181 FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240
           FEVYTA+LNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD
Sbjct: 181 FEVYTAVLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240

Query: 241 MLEKTANLFRPKLIIAGASAYPRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVADP 300
           MLEKTANLFRPKLIIAGASAYPRDFD+PRMRKIADAVGAFLMMDMAHISGLVAASVVADP
Sbjct: 241 MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVADP 300

Query: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360
           FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA
Sbjct: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360

Query: 361 VCLKHAQSPEFKVYQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420
           VCLKHAQSPEFKVYQNKVI+NCRALA+RLVELGYKLVSGGSDNHLVLVDLRPLGIDGARV
Sbjct: 361 VCLKHAQSPEFKVYQNKVIANCRALANRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420

Query: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITL 480
           EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITL
Sbjct: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITL 480

Query: 481 DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           DAKPLAPGSKLQEFLKFVTTSDFPL DR+SDLRSRVEALTTQFPIPGL
Sbjct: 481 DAKPLAPGSKLQEFLKFVTTSDFPLTDRISDLRSRVEALTTQFPIPGL 528

[Close]

BLAST of Cla002746 vs. TrEMBL
Match: V4T4Q6_9ROSI (Serine hydroxymethyltransferase OS=Citrus clementina GN=CICLE_v10019689mg PE=3 SV=1)

HSP 1 Score: 904.0 bits (2335), Expect = 8.3e-260
Identity = 448/529 (84.69%), Postives = 491/529 (92.82%), Query Frame = 1


Query: 1   MQATSGAAVMGSLQVAVCAKGSCFPSQVSNICVFPQHKKINILKPCKSSNIEASMVAGKP 60
           MQA SGAAVMGSLQ  +  KGS FPS+ S +  FP   ++N++KPC+ S+IE S+V G+P
Sbjct: 1   MQACSGAAVMGSLQQPIWVKGSRFPSEGSVMVGFPNQIRLNVVKPCRCSSIEGSLVTGRP 60

Query: 61  SSSLSITVPEIGGV-SQFVDHTLSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVME 120
            SS+S+ +PEIGG  S FVD++L E DPEV  II KEK+RQFKSLELIASENFTSRAVME
Sbjct: 61  PSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVME 120

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQ+RALAAF+LD NKWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180

Query: 181 NFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDY 240
           NFEVYTAIL PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE+TG+V+Y
Sbjct: 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVNY 240

Query: 241 DMLEKTANLFRPKLIIAGASAYPRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 300
           DMLEKTA LFRPKLIIAGASAYPRDFD+PRMR+IADAVGAFLMMDMAHISGLVAASVVAD
Sbjct: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGAFLMMDMAHISGLVAASVVAD 300

Query: 301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGL 360
           PF+YCD+VTTTTHKSLRGPRGGMIFF+KDPVLGV+LESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360

Query: 361 AVCLKHAQSPEFKVYQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGAR 420
           AVCLKH QSPEFKVYQNKV+SNCRALASRLVELGYKLVSGGSDNHLVLVDLRP+GIDGAR
Sbjct: 361 AVCLKHVQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKIT 480
           VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF+EKEFVA+ADFIHEGV+IT
Sbjct: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480

Query: 481 LDAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           L+AK L  GSKLQ+F+ FVT+ +F L++ V+DLR RVEALTTQFPIPG+
Sbjct: 481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529

[Close]

BLAST of Cla002746 vs. TrEMBL
Match: A0A067DVM9_CITSI (Serine hydroxymethyltransferase OS=Citrus sinensis GN=CISIN_1g009680mg PE=3 SV=1)

HSP 1 Score: 900.2 bits (2325), Expect = 1.2e-258
Identity = 447/529 (84.50%), Postives = 489/529 (92.44%), Query Frame = 1


Query: 1   MQATSGAAVMGSLQVAVCAKGSCFPSQVSNICVFPQHKKINILKPCKSSNIEASMVAGKP 60
           MQA SGAAVMGSLQ  +  KG   PS+ S +  FP   ++N++KPC+ S+IE S+V G+P
Sbjct: 1   MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRP 60

Query: 61  SSSLSITVPEIGGV-SQFVDHTLSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVME 120
            SS+S+ +PEIGG  S FVD++L E DPEV  II KEK+RQFKSLELIASENFTSRAVME
Sbjct: 61  PSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVME 120

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQ+RALAAF+LD NKWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180

Query: 181 NFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDY 240
           NFEVYTAIL PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE+TG+VDY
Sbjct: 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240

Query: 241 DMLEKTANLFRPKLIIAGASAYPRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 300
           DMLEKTA LFRPKLIIAGASAYPRDFD+PRMR+IADAVGA LMMDMAHISGLVAASVVAD
Sbjct: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300

Query: 301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGL 360
           PF+YCD+VTTTTHKSLRGPRGGMIFF+KDPVLGV+LESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360

Query: 361 AVCLKHAQSPEFKVYQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGAR 420
           AVCLKHAQSPEFKVYQNKV+SNCRALASRLVELGYKLVSGGSDNHLVLVDLRP+GIDGAR
Sbjct: 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKIT 480
           VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF+EKEFVA+ADFIHEGV+IT
Sbjct: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480

Query: 481 LDAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           L+AK L  GSKLQ+F+ FVT+ +F L++ V+DLR RVEALTTQFPIPG+
Sbjct: 481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529

[Close]

BLAST of Cla002746 vs. TrEMBL
Match: A9PL11_POPTM (Serine hydroxymethyltransferase OS=Populus tremuloides GN=SHMT8 PE=2 SV=1)

HSP 1 Score: 889.4 bits (2297), Expect = 2.1e-255
Identity = 442/529 (83.55%), Postives = 481/529 (90.93%), Query Frame = 1


Query: 1   MQATSGAAVMGSLQVAVCAKGSCFPSQVSNICVFPQHKKINILKPCKSSNIEASMVAGKP 60
           MQATSGAAVMGSLQ  V +KG  FP + S I  FP   K+N +KPC++S++E S+V G+P
Sbjct: 1   MQATSGAAVMGSLQQPVLSKGPAFPMKRSVIIGFPYQVKLNSVKPCRASSLEGSLVTGRP 60

Query: 61  SSSLSITVPEIGG-VSQFVDHTLSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVME 120
            SS+S+ +PE G  +S F D+ LSE DPEV  II KEK RQFKSLELIASENFTSRAVME
Sbjct: 61  PSSVSVPIPETGADISSFKDYGLSEADPEVLEIIKKEKDRQFKSLELIASENFTSRAVME 120

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQ+RALA+F+LD  KWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALASFNLDGKKWGVNVQPLSGSPA 180

Query: 181 NFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDY 240
           NFEVYTA+L PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE+TG+VDY
Sbjct: 181 NFEVYTALLKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240

Query: 241 DMLEKTANLFRPKLIIAGASAYPRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 300
           DMLEKTA LFRPKLIIAGASAYPRDFD+PRMRKIADAVGAFLMMDMAHISGLV ASVVAD
Sbjct: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVPASVVAD 300

Query: 301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGL 360
           PFEYCD+VTTTTHKSLRGPRGGMIFF+KDPVLGVD+ESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVDMESAINNAVFPGLQGGPHNHTIGGL 360

Query: 361 AVCLKHAQSPEFKVYQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGAR 420
           AVCLKHAQSPEFK YQ +VI N RALA+R+VELGYKLVSGGSDNHL+LVDLRPLG+DGAR
Sbjct: 361 AVCLKHAQSPEFKAYQKQVICNSRALANRMVELGYKLVSGGSDNHLILVDLRPLGLDGAR 420

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKIT 480
           VEKILD+ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTE+EFVA AD IHEGV+I+
Sbjct: 421 VEKILDIASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFVATADLIHEGVQIS 480

Query: 481 LDAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           L+AK    GSKLQ+FLKFV + DFPL D+VSDLR RVEALTTQFPIPGL
Sbjct: 481 LEAKKSVSGSKLQDFLKFVKSPDFPLTDKVSDLRRRVEALTTQFPIPGL 529

[Close]

BLAST of Cla002746 vs. TrEMBL
Match: B9HDQ7_POPTR (Serine hydroxymethyltransferase OS=Populus trichocarpa GN=POPTR_0006s24840g PE=3 SV=1)

HSP 1 Score: 889.4 bits (2297), Expect = 2.1e-255
Identity = 442/529 (83.55%), Postives = 481/529 (90.93%), Query Frame = 1


Query: 1   MQATSGAAVMGSLQVAVCAKGSCFPSQVSNICVFPQHKKINILKPCKSSNIEASMVAGKP 60
           MQATSGAAVMGSLQ  V +KG  FP + S I  FP   K+N +KPC++S++E S+V G+P
Sbjct: 1   MQATSGAAVMGSLQQPVLSKGPAFPMKRSVIIGFPYQVKLNSVKPCRASSLEGSLVTGRP 60

Query: 61  SSSLSITVPEIGG-VSQFVDHTLSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVME 120
            SS+S+ +PE G  +S F D+ L E DPEV  II+KEK RQFKSLELIASENFTSRAVME
Sbjct: 61  PSSVSVPIPETGADISSFKDYGLGEADPEVLEIINKEKDRQFKSLELIASENFTSRAVME 120

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQ+RALA+F+LD  KWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALASFNLDGKKWGVNVQPLSGSPA 180

Query: 181 NFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDY 240
           NFEVYTA+L PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE+TG+VDY
Sbjct: 181 NFEVYTALLKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240

Query: 241 DMLEKTANLFRPKLIIAGASAYPRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 300
           DMLEKTA LFRPKLIIAGASAYPRDFD+PRMRKIADAVGAFLMMDMAHISGLVAASVVAD
Sbjct: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 300

Query: 301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGL 360
           PFEYCD+VTTTTHKSLRGPRGGMIFF+KDPVLGVD+ESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVDMESAINNAVFPGLQGGPHNHTIGGL 360

Query: 361 AVCLKHAQSPEFKVYQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGAR 420
           AVCLKHAQSPEFK YQ +VI N RALA+R+VELGYKLVSGGSDNHL+LVDLRPLG+DGAR
Sbjct: 361 AVCLKHAQSPEFKAYQKQVICNSRALANRMVELGYKLVSGGSDNHLILVDLRPLGLDGAR 420

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKIT 480
           VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTE EFVA AD IHEGV+I+
Sbjct: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTETEFVATADLIHEGVQIS 480

Query: 481 LDAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           L+AK    GSKLQ+FLKFV + DFPL D+VSDL+ RVEALTTQFPIPGL
Sbjct: 481 LEAKKSVSGSKLQDFLKFVKSPDFPLTDKVSDLQRRVEALTTQFPIPGL 529

[Close]

BLAST of Cla002746 vs. NCBI nr
Match: gi|778691314|ref|XP_011653260.1| (PREDICTED: serine hydroxymethyltransferase 3, chloroplastic [Cucumis sativus])

HSP 1 Score: 1020.8 bits (2638), Expect = 8.7e-295
Identity = 507/528 (96.02%), Postives = 518/528 (98.11%), Query Frame = 1


Query: 1   MQATSGAAVMGSLQVAVCAKGSCFPSQVSNICVFPQHKKINILKPCKSSNIEASMVAGKP 60
           MQATSG AVMGSLQVAVC KGSCFPS+ S+ICVFPQ KK+NILKPCKS  +EASMVAGKP
Sbjct: 1   MQATSGVAVMGSLQVAVCGKGSCFPSKSSSICVFPQQKKMNILKPCKSFKVEASMVAGKP 60

Query: 61  SSSLSITVPEIGGVSQFVDHTLSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEA 120
           SSS+S+TVPEIGGVS FVDH LSE DPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEA
Sbjct: 61  SSSVSVTVPEIGGVSNFVDHALSETDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEA 120

Query: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPAN 180
           VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPAN
Sbjct: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPAN 180

Query: 181 FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240
           FEVYTA+LNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD
Sbjct: 181 FEVYTAVLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240

Query: 241 MLEKTANLFRPKLIIAGASAYPRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVADP 300
           MLEKTANLFRPKLIIAGASAYPRDFD+PRMRKIADAVGAFLMMDMAHISGLVAASVVADP
Sbjct: 241 MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVADP 300

Query: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360
           FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA
Sbjct: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360

Query: 361 VCLKHAQSPEFKVYQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420
           VCLKHAQSPEFKVYQNKVI+NCRALA+RLVELGYKLVSGGSDNHLVLVDLRPLGIDGARV
Sbjct: 361 VCLKHAQSPEFKVYQNKVIANCRALANRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420

Query: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITL 480
           EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITL
Sbjct: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITL 480

Query: 481 DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           DAKPLAPGSKLQEFLKFVTTSDFPL DR+SDLRSRVEALTTQFPIPGL
Sbjct: 481 DAKPLAPGSKLQEFLKFVTTSDFPLTDRISDLRSRVEALTTQFPIPGL 528

[Close]

BLAST of Cla002746 vs. NCBI nr
Match: gi|659101906|ref|XP_008451853.1| (PREDICTED: serine hydroxymethyltransferase 3, chloroplastic [Cucumis melo])

HSP 1 Score: 1017.7 bits (2630), Expect = 7.4e-294
Identity = 506/528 (95.83%), Postives = 517/528 (97.92%), Query Frame = 1


Query: 1   MQATSGAAVMGSLQVAVCAKGSCFPSQVSNICVFPQHKKINILKPCKSSNIEASMVAGKP 60
           MQATSGAAVMGSL+VAVC KGSCFPS+ S+ICVFPQHKK+NILKP KSS ++ASMV GKP
Sbjct: 1   MQATSGAAVMGSLEVAVCGKGSCFPSKSSSICVFPQHKKMNILKPSKSSKVKASMVVGKP 60

Query: 61  SSSLSITVPEIGGVSQFVDHTLSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEA 120
           SSS S+TVPEIGGVS FVDH LSE DPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEA
Sbjct: 61  SSSASVTVPEIGGVSHFVDHALSETDPEVRSIIDKEKQRQFKSLELIASENFTSRAVMEA 120

Query: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPAN 180
           VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPAN
Sbjct: 121 VGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPAN 180

Query: 181 FEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240
           FEVYTA+LNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD
Sbjct: 181 FEVYTAVLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDYD 240

Query: 241 MLEKTANLFRPKLIIAGASAYPRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVADP 300
           MLE+TANLFRPKLIIAGASAYPRDFD+PRMRKIADAVGAFLMMDMAHISGLVAASVVADP
Sbjct: 241 MLERTANLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVADP 300

Query: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360
           FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA
Sbjct: 301 FEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLA 360

Query: 361 VCLKHAQSPEFKVYQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420
           VCLKHAQSPEFKVYQNKVI+NCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARV
Sbjct: 361 VCLKHAQSPEFKVYQNKVIANCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGARV 420

Query: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKITL 480
           EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEF AVADFIHEGVKITL
Sbjct: 421 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFAAVADFIHEGVKITL 480

Query: 481 DAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           DAKPLAPGSKLQEFLKFVTTSDFPL DRVSDLRSRVEALTTQFPIPGL
Sbjct: 481 DAKPLAPGSKLQEFLKFVTTSDFPLTDRVSDLRSRVEALTTQFPIPGL 528

[Close]

BLAST of Cla002746 vs. NCBI nr
Match: gi|567898920|ref|XP_006441948.1| (hypothetical protein CICLE_v10019689mg [Citrus clementina])

HSP 1 Score: 904.0 bits (2335), Expect = 1.2e-259
Identity = 448/529 (84.69%), Postives = 491/529 (92.82%), Query Frame = 1


Query: 1   MQATSGAAVMGSLQVAVCAKGSCFPSQVSNICVFPQHKKINILKPCKSSNIEASMVAGKP 60
           MQA SGAAVMGSLQ  +  KGS FPS+ S +  FP   ++N++KPC+ S+IE S+V G+P
Sbjct: 1   MQACSGAAVMGSLQQPIWVKGSRFPSEGSVMVGFPNQIRLNVVKPCRCSSIEGSLVTGRP 60

Query: 61  SSSLSITVPEIGGV-SQFVDHTLSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVME 120
            SS+S+ +PEIGG  S FVD++L E DPEV  II KEK+RQFKSLELIASENFTSRAVME
Sbjct: 61  PSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVME 120

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQ+RALAAF+LD NKWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180

Query: 181 NFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDY 240
           NFEVYTAIL PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE+TG+V+Y
Sbjct: 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVNY 240

Query: 241 DMLEKTANLFRPKLIIAGASAYPRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 300
           DMLEKTA LFRPKLIIAGASAYPRDFD+PRMR+IADAVGAFLMMDMAHISGLVAASVVAD
Sbjct: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGAFLMMDMAHISGLVAASVVAD 300

Query: 301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGL 360
           PF+YCD+VTTTTHKSLRGPRGGMIFF+KDPVLGV+LESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360

Query: 361 AVCLKHAQSPEFKVYQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGAR 420
           AVCLKH QSPEFKVYQNKV+SNCRALASRLVELGYKLVSGGSDNHLVLVDLRP+GIDGAR
Sbjct: 361 AVCLKHVQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKIT 480
           VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF+EKEFVA+ADFIHEGV+IT
Sbjct: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480

Query: 481 LDAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           L+AK L  GSKLQ+F+ FVT+ +F L++ V+DLR RVEALTTQFPIPG+
Sbjct: 481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529

[Close]

BLAST of Cla002746 vs. NCBI nr
Match: gi|568849579|ref|XP_006478527.1| (PREDICTED: serine hydroxymethyltransferase 3, chloroplastic [Citrus sinensis])

HSP 1 Score: 903.3 bits (2333), Expect = 2.0e-259
Identity = 448/529 (84.69%), Postives = 490/529 (92.63%), Query Frame = 1


Query: 1   MQATSGAAVMGSLQVAVCAKGSCFPSQVSNICVFPQHKKINILKPCKSSNIEASMVAGKP 60
           MQA SGAAVMGSLQ  +  KG   PS+ S +  FP   ++N++KPC+ S+IE S+V G+P
Sbjct: 1   MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRP 60

Query: 61  SSSLSITVPEIGGV-SQFVDHTLSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVME 120
            SS+S+ +PEIGG  S FVD++L E DPEVR II KEK+RQFKSLELIASENFTSRAVME
Sbjct: 61  PSSVSVPIPEIGGDGSSFVDYSLGEADPEVREIITKEKERQFKSLELIASENFTSRAVME 120

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQ+RALAAF+LD NKWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180

Query: 181 NFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDY 240
           NFEVYTAIL PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE+TG+VDY
Sbjct: 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240

Query: 241 DMLEKTANLFRPKLIIAGASAYPRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 300
           DMLEKTA LFRPKLIIAGASAYPRDFD+PRMR+IADAVGA LMMDMAHISGLVAASVVAD
Sbjct: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300

Query: 301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGL 360
           PF+YCD+VTTTTHKSLRGPRGGMIFF+KDPVLGV+LESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360

Query: 361 AVCLKHAQSPEFKVYQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGAR 420
           AVCLKHAQSPEFKVYQNKV+SNCRALASRLVELGYKLVSGGSDNHLVLVDLRP+GIDGAR
Sbjct: 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKIT 480
           VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF+EKEFVA+ADFIHEGV+IT
Sbjct: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480

Query: 481 LDAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           L+AK L  GSKLQ+F+ FVT+ +F L++ V+DLR RVEALTTQFPIPG+
Sbjct: 481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529

[Close]

BLAST of Cla002746 vs. NCBI nr
Match: gi|641827712|gb|KDO46888.1| (hypothetical protein CISIN_1g009680mg [Citrus sinensis])

HSP 1 Score: 900.2 bits (2325), Expect = 1.7e-258
Identity = 447/529 (84.50%), Postives = 489/529 (92.44%), Query Frame = 1


Query: 1   MQATSGAAVMGSLQVAVCAKGSCFPSQVSNICVFPQHKKINILKPCKSSNIEASMVAGKP 60
           MQA SGAAVMGSLQ  +  KG   PS+ S +  FP   ++N++KPC+ S+IE S+V G+P
Sbjct: 1   MQACSGAAVMGSLQQPIWVKGPRLPSEGSVMVGFPNQIRLNMVKPCRCSSIEGSLVTGRP 60

Query: 61  SSSLSITVPEIGGV-SQFVDHTLSEIDPEVRSIIDKEKQRQFKSLELIASENFTSRAVME 120
            SS+S+ +PEIGG  S FVD++L E DPEV  II KEK+RQFKSLELIASENFTSRAVME
Sbjct: 61  PSSVSVPIPEIGGDGSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVME 120

Query: 121 AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPA 180
           AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQ+RALAAF+LD NKWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180

Query: 181 NFEVYTAILNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDY 240
           NFEVYTAIL PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE+TG+VDY
Sbjct: 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240

Query: 241 DMLEKTANLFRPKLIIAGASAYPRDFDHPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 300
           DMLEKTA LFRPKLIIAGASAYPRDFD+PRMR+IADAVGA LMMDMAHISGLVAASVVAD
Sbjct: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300

Query: 301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGL 360
           PF+YCD+VTTTTHKSLRGPRGGMIFF+KDPVLGV+LESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGL 360

Query: 361 AVCLKHAQSPEFKVYQNKVISNCRALASRLVELGYKLVSGGSDNHLVLVDLRPLGIDGAR 420
           AVCLKHAQSPEFKVYQNKV+SNCRALASRLVELGYKLVSGGSDNHLVLVDLRP+GIDGAR
Sbjct: 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGAR 420

Query: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKIT 480
           VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF+EKEFVA+ADFIHEGV+IT
Sbjct: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 480

Query: 481 LDAKPLAPGSKLQEFLKFVTTSDFPLIDRVSDLRSRVEALTTQFPIPGL 529
           L+AK L  GSKLQ+F+ FVT+ +F L++ V+DLR RVEALTTQFPIPG+
Sbjct: 481 LEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 529

The following BLAST results are available for this feature:

BLAST of Cla002746 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GLYP3_ARATH	1.2e-240	79.21	Serine hydroxymethyltransferase 3, chloroplastic OS=Arabidopsis thaliana GN=SHM3...	[more]
GLYM1_ARATH	1.8e-159	61.23	Serine hydroxymethyltransferase 1, mitochondrial OS=Arabidopsis thaliana GN=SHM1...	[more]
GLYM_PEA	3.1e-159	61.45	Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1	[more]
GLYC_NEUCR	4.1e-159	60.87	Serine hydroxymethyltransferase, cytosolic OS=Neurospora crassa (strain ATCC 246...	[more]
GLYM2_ARATH	9.1e-159	61.54	Serine hydroxymethyltransferase 2, mitochondrial OS=Arabidopsis thaliana GN=SHM2...	[more]

BLAST of Cla002746 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYS6_CUCSA	6.1e-295	96.02	Serine hydroxymethyltransferase OS=Cucumis sativus GN=Csa_4G062380 PE=3 SV=1	[more]
V4T4Q6_9ROSI	8.3e-260	84.69	Serine hydroxymethyltransferase OS=Citrus clementina GN=CICLE_v10019689mg PE=3 S...	[more]
A0A067DVM9_CITSI	1.2e-258	84.50	Serine hydroxymethyltransferase OS=Citrus sinensis GN=CISIN_1g009680mg PE=3 SV=1	[more]
A9PL11_POPTM	2.1e-255	83.55	Serine hydroxymethyltransferase OS=Populus tremuloides GN=SHMT8 PE=2 SV=1	[more]
B9HDQ7_POPTR	2.1e-255	83.55	Serine hydroxymethyltransferase OS=Populus trichocarpa GN=POPTR_0006s24840g PE=3...	[more]

BLAST of Cla002746 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778691314\|ref\|XP_011653260.1\|	8.7e-295	96.02	PREDICTED: serine hydroxymethyltransferase 3, chloroplastic [Cucumis sativus]	[more]
gi\|659101906\|ref\|XP_008451853.1\|	7.4e-294	95.83	PREDICTED: serine hydroxymethyltransferase 3, chloroplastic [Cucumis melo]	[more]
gi\|567898920\|ref\|XP_006441948.1\|	1.2e-259	84.69	hypothetical protein CICLE_v10019689mg [Citrus clementina]	[more]
gi\|568849579\|ref\|XP_006478527.1\|	2.0e-259	84.69	PREDICTED: serine hydroxymethyltransferase 3, chloroplastic [Citrus sinensis]	[more]
gi\|641827712\|gb\|KDO46888.1\|	1.7e-258	84.50	hypothetical protein CISIN_1g009680mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001085	Ser_HO-MeTrfase
IPR015421	PyrdxlP-dep_Trfase_major
IPR015422	PyrdxlP-dep_Trfase_dom1
IPR015424	PyrdxlP-dep_Trfase
IPR019798	Ser_HO-MeTrfase_PLP_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0016740	transferase activity
GO:0003824	catalytic activity
GO:0004372	glycine hydroxymethyltransferase activity
GO:0030170	pyridoxal phosphate binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006544	glycine metabolic process
GO:0006563	L-serine metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0032259	methylation
biological_process	GO:0035999	tetrahydrofolate interconversion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004372	glycine hydroxymethyltransferase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016740	transferase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU41780	watermelon EST collection version 2.0	transcribed_cluster
WMU52236	watermelon EST collection version 2.0	transcribed_cluster
WMU62164	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla002746	Cla002746.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU41780	WMU41780	transcribed_cluster
WMU52236	WMU52236	transcribed_cluster
WMU62164	WMU62164	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001085	Serine hydroxymethyltransferase	HAMAP	MF_00051	SHMT	coord: 81..527 score: 44
IPR001085	Serine hydroxymethyltransferase	PIR	PIRSF000412	SHMT	coord: 64..528 score: 3.8E
IPR001085	Serine hydroxymethyltransferase	PANTHER	PTHR11680	SERINE HYDROXYMETHYLTRANSFERASE	coord: 50..528 score:
IPR001085	Serine hydroxymethyltransferase	PFAM	PF00464	SHMT	coord: 82..472 score: 8.9E
IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	GENE3D	G3DSA:3.40.640.10		coord: 111..371 score: 2.3
IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GENE3D	G3DSA:3.90.1150.10		coord: 372..527 score: 1.5
IPR015424	Pyridoxal phosphate-dependent transferase	unknown	SSF53383	PLP-dependent transferases	coord: 73..527 score: 2.61E
IPR019798	Serine hydroxymethyltransferase, pyridoxal phosphate binding site	PROSITE	PS00096	SHMT	coord: 305..321 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla002746	Cla97C07G129930	Watermelon (97103) v2	wmwmbB176
Cla002746	ClCG07G001670	Watermelon (Charleston Gray)	wcgwmB374

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla002746	Watermelon (97103) v2	wmwmbB162
Cla002746	Wax gourd	wgowmB266
Cla002746	Watermelon (97103) v1	wmwmB100
Cla002746	Watermelon (97103) v1	wmwmB117
Cla002746	Cucumber (Gy14) v1	cgywmB084
Cla002746	Cucumber (Gy14) v1	cgywmB246
Cla002746	Cucumber (Gy14) v1	cgywmB476
Cla002746	Cucurbita maxima (Rimu)	cmawmB492
Cla002746	Cucurbita maxima (Rimu)	cmawmB559
Cla002746	Cucurbita moschata (Rifu)	cmowmB486
Cla002746	Cucurbita moschata (Rifu)	cmowmB552
Cla002746	Cucurbita moschata (Rifu)	cmowmB791
Cla002746	Melon (DHL92) v3.5.1	mewmB360
Cla002746	Melon (DHL92) v3.5.1	mewmB411
Cla002746	Melon (DHL92) v3.5.1	mewmB460
Cla002746	Watermelon (Charleston Gray)	wcgwmB026
Cla002746	Cucumber (Chinese Long) v2	cuwmB223
Cla002746	Watermelon (Charleston Gray)	wcgwmB282
Cla002746	Watermelon (Charleston Gray)	wcgwmB325
Cla002746	Cucumber (Chinese Long) v2	cuwmB227
Cla002746	Cucumber (Chinese Long) v2	cuwmB587
Cla002746	Cucurbita pepo (Zucchini)	cpewmB258
Cla002746	Cucurbita pepo (Zucchini)	cpewmB701
Cla002746	Cucurbita pepo (Zucchini)	cpewmB843
Cla002746	Bottle gourd (USVL1VR-Ls)	lsiwmB015
Cla002746	Bottle gourd (USVL1VR-Ls)	lsiwmB194
Cla002746	Bottle gourd (USVL1VR-Ls)	lsiwmB357
Cla002746	Bottle gourd (USVL1VR-Ls)	lsiwmB360
Cla002746	Cucumber (Gy14) v2	cgybwmB209
Cla002746	Cucumber (Gy14) v2	cgybwmB212
Cla002746	Cucumber (Gy14) v2	cgybwmB549
Cla002746	Melon (DHL92) v3.6.1	medwmB358
Cla002746	Melon (DHL92) v3.6.1	medwmB445
Cla002746	Silver-seed gourd	carwmB0069
Cla002746	Silver-seed gourd	carwmB0779
Cla002746	Cucumber (Chinese Long) v3	cucwmB231
Cla002746	Cucumber (Chinese Long) v3	cucwmB234