Cla002452 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla002452
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown Protein (AHRD V1)
Location	Chr8 : 9526518 .. 9527081 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGTGGTAGCCAAGGTTTGGAAGCGAGTTCTTGTAACATTTCTCTGTGTTCTTTTGGTTTTCTTGGTGTATAGTATCATAGCTGGATGTGCTTTGTTCTTGATTGTTTTGCCATTAGGGAAGGTTGATGAAACAACTTTGGGTGTGGCTTTTGTTTTTTACTCTGTTGGGTTGTTGTATTTGGTAGTGGTGTTACAATTAGCTGGTGTTGTTTCTGTGTTGGAAGAGTCATGTGGGTTTAAAGCTATAGCCAAGAGTAGGTTGCTTTTGAAGGAAAAGATGGCATTGGCGACAATCATCGTGTTGACGATTTATTCAGGTTTCGGGATTTTTCTATGGCTAGAGGATCTTGTTAGAAAGATGCTCTTCTCGCAGTCGTCAATGATTATGTGGATGAATGTGTTAGGCAGCTTGTTGTTACTATTGTTGATTTTGGTTTTCCTATTGTGGAGGCTGGTGTTGGAGACAATGTTCTATTTCGTCTGTAAATCGTATCATCATGAGAGTGTCGATATGTTGGCCATATCAGATCAAGATCAAGATCTTTTAAGAAGCCCATAA

mRNA sequence

ATGAGCGTGGTAGCCAAGGTTTGGAAGCGAGTTCTTGTAACATTTCTCTGTGTTCTTTTGGTTTTCTTGGTGTATAGTATCATAGCTGGATGTGCTTTGTTCTTGATTGTTTTGCCATTAGGGAAGGTTGATGAAACAACTTTGGGTGTGGCTTTTGTTTTTTACTCTGTTGGGTTGTTGTATTTGGTAGTGGTGTTACAATTAGCTGGTGTTGTTTCTGTGTTGGAAGAGTCATGTGGGTTTAAAGCTATAGCCAAGAGTAGGTTGCTTTTGAAGGAAAAGATGGCATTGGCGACAATCATCGTGTTGACGATTTATTCAGGTTTCGGGATTTTTCTATGGCTAGAGGATCTTGTTAGAAAGATGCTCTTCTCGCAGTCGTCAATGATTATGTGGATGAATGTGTTAGGCAGCTTGTTGTTACTATTGTTGATTTTGGTTTTCCTATTGTGGAGGCTGGTGTTGGAGACAATGTTCTATTTCGTCTGTAAATCGTATCATCATGAGAGTGTCGATATGTTGGCCATATCAGATCAAGATCAAGATCTTTTAAGAAGCCCATAA

Coding sequence (CDS)

ATGAGCGTGGTAGCCAAGGTTTGGAAGCGAGTTCTTGTAACATTTCTCTGTGTTCTTTTGGTTTTCTTGGTGTATAGTATCATAGCTGGATGTGCTTTGTTCTTGATTGTTTTGCCATTAGGGAAGGTTGATGAAACAACTTTGGGTGTGGCTTTTGTTTTTTACTCTGTTGGGTTGTTGTATTTGGTAGTGGTGTTACAATTAGCTGGTGTTGTTTCTGTGTTGGAAGAGTCATGTGGGTTTAAAGCTATAGCCAAGAGTAGGTTGCTTTTGAAGGAAAAGATGGCATTGGCGACAATCATCGTGTTGACGATTTATTCAGGTTTCGGGATTTTTCTATGGCTAGAGGATCTTGTTAGAAAGATGCTCTTCTCGCAGTCGTCAATGATTATGTGGATGAATGTGTTAGGCAGCTTGTTGTTACTATTGTTGATTTTGGTTTTCCTATTGTGGAGGCTGGTGTTGGAGACAATGTTCTATTTCGTCTGTAAATCGTATCATCATGAGAGTGTCGATATGTTGGCCATATCAGATCAAGATCAAGATCTTTTAAGAAGCCCATAA

Protein sequence

MSVVAKVWKRVLVTFLCVLLVFLVYSIIAGCALFLIVLPLGKVDETTLGVAFVFYSVGLLYLVVVLQLAGVVSVLEESCGFKAIAKSRLLLKEKMALATIIVLTIYSGFGIFLWLEDLVRKMLFSQSSMIMWMNVLGSLLLLLLILVFLLWRLVLETMFYFVCKSYHHESVDMLAISDQDQDLLRSP

Homology

[Close]

BLAST of Cla002452 vs. TrEMBL
Match: A0A0A0KJQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G421800 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 4.5e-67
Identity = 134/186 (72.04%), Postives = 154/186 (82.80%), Query Frame = 1


Query: 1   MSVVAKVWKRVLVTFLCVLLVFLVYSIIAGCALFLIVLPLGKVDETTLGVAFVFYSVGLL 60
           MSVV  VWKR+LVTFLCV+LVFL+Y +I G ALF+I+LPLG+VD TTLGVAF+FY +GL 
Sbjct: 119 MSVVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPLGEVDRTTLGVAFLFYFIGLF 178

Query: 61  YLVVVLQLAGVVSVLEESCGFKAIAKSRLLLKEKMALATIIVLTIYSGFGIFLWLEDLVR 120
           YLVVVLQLAGVVSVLEES GFKA+  SRLLLKE M  AT+IVLTIYSGFGI LWL+ L +
Sbjct: 179 YLVVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIYSGFGILLWLKALTK 238

Query: 121 KMLFSQSSMIMWMNVLGSLLLLLLILVFLLWRLVLETMFYFVCKSYHHESVDMLAISDQD 180
           KMLFS S++ +WM +LGSL L  LILVFLLWRLV ETM Y VCKSY+HES+D   +SD D
Sbjct: 239 KMLFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESIDKTTLSDPD 298

Query: 181 QDLLRS 187
             LLRS
Sbjct: 299 PVLLRS 304

[Close]

BLAST of Cla002452 vs. TrEMBL
Match: A0A0A0K819_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020230 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.5e-65
Identity = 135/184 (73.37%), Postives = 152/184 (82.61%), Query Frame = 1


Query: 1   MSVVAKVWKRVLVTFLCVLLVFLVYSIIAGCALFLIVLPLGKVDETTLGVAFVFYSVGLL 60
           MSVV KVWKR+LVT LCV+LVFL+Y +I G ALF+I+LPLG VD TTLGVAFVFY VGLL
Sbjct: 45  MSVVVKVWKRLLVTNLCVILVFLIYHMIVGLALFIIILPLGTVDRTTLGVAFVFYFVGLL 104

Query: 61  YLVVVLQLAGVVSVLEESCGFKAIAKSRLLLKEKMALATIIVLTIYSGFGIFLWLEDLVR 120
           YLVVVLQLAGVVSVLEES GFKA+AKSRLLLKE M  AT+IVL I SGFGI LWL+ L R
Sbjct: 105 YLVVVLQLAGVVSVLEESRGFKAMAKSRLLLKENMVSATVIVLAISSGFGILLWLKSLTR 164

Query: 121 KMLFSQSSMIMWMNVLGSLLLLLLILVFLLWRLVLETMFYFVCKSYHHESVDMLAISDQD 180
            MLFS  S+ +WM+VL +L L L +LVFLLW LV ETMFYFVCKSY+HES+DM  +SD D
Sbjct: 165 MMLFS-PSVAIWMHVLATLSLDLWVLVFLLWSLVSETMFYFVCKSYNHESIDMSTVSDHD 224

Query: 181 QDLL 185
             LL
Sbjct: 225 PILL 227

[Close]

BLAST of Cla002452 vs. TrEMBL
Match: A0A0A0KBZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020210 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30
Identity = 79/192 (41.15%), Postives = 119/192 (61.98%), Query Frame = 1


Query: 1   MSVVAKVWKRVLVTFLCVLLVFLVYSIIAGCALFLIVL-------PLGKVDETTLGVAFV 60
           +S+V KVWKR++VTF CV   F VY+++A  A  L++        P G V+ +   V F+
Sbjct: 85  ISIVPKVWKRLVVTFFCVFASFFVYNLLAVFAFILLLFILLVQYGPFGDVNGSIFVVFFI 144

Query: 61  FYSVGLLYLVVVLQLAGVVSVLEESCGFKAIAKSRLLLKEKMALATIIVLTIYSGFGIFL 120
            Y +GLLYL V++QL+ VV+VLEES GFKA+ KS+ LLK  M +AT+++L I     + +
Sbjct: 145 LYFIGLLYLSVIVQLSSVVTVLEESYGFKAMVKSKALLKGNMLVATLMLLLI--NISLVI 204

Query: 121 WLEDLVRKMLFSQSSMIMWMNVLG----SLLLLLLILVFLLWRLVLETMFYFVCKSYHHE 180
             +  V+ ++       +W  +LG     ++ L L+L F LW+LVLET+ YFVCK  H E
Sbjct: 205 IQQAFVKLVVHG-----VWFGILGRGILGIVCLFLLLNFFLWQLVLETVLYFVCKEQHQE 264

Query: 181 SVDMLAISDQDQ 182
           ++D  A+S+  Q
Sbjct: 265 NIDKSALSNHLQ 269

[Close]

BLAST of Cla002452 vs. TrEMBL
Match: A0A151R5Q3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_040979 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-29
Identity = 83/183 (45.36%), Postives = 116/183 (63.39%), Query Frame = 1


Query: 1   MSVVAKVWKRVLVTFLCVLLVFLVYSIIAGCALFLIVLPLG--KVDETTLGVAFVFYSVG 60
           MSVV +VWKR++VTFLC +  F+VY+++AG    ++ L +G   V    L V  +FY VG
Sbjct: 132 MSVVPRVWKRLMVTFLCTVAAFIVYNVVAGAVTLMLALTIGVRNVGAAILLVIAIFYLVG 191

Query: 61  LLYLVVVLQLAGVVSVLEESCGFKAIAKSRLLLKEKMALATIIVLTIYSGFGIFLWLEDL 120
           L+YL VV  LA VV+VLE+S G++A+ KS+ L+K  M L+ +IVL +   F +  +L  +
Sbjct: 192 LVYLTVVWLLASVVTVLEDSYGYEAMMKSKELIKGNMGLSVMIVLKLNVSFFLIQFLFTM 251

Query: 121 V---RKMLFSQSSMIMWMNVLGSLLLLLLILVFLLWRLVLETMFYFVCKSYHHESVDMLA 179
           V      LFS  SM     + G +  LLL  +FLL  LV++T+ YFVCKSYH E VD  A
Sbjct: 252 VVVNGGELFSLGSMD--RTIYGIVCFLLLSHLFLL-MLVIQTVLYFVCKSYHREIVDKSA 311

[Close]

BLAST of Cla002452 vs. TrEMBL
Match: B9S2N3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0559550 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.4e-28
Identity = 76/183 (41.53%), Postives = 115/183 (62.84%), Query Frame = 1


Query: 1   MSVVAKVWKRVLVTFLCVLLVFLVYSIIAGCALFLIVLPLGKVDETTLGVA-----FVFY 60
           MSVV KVWKR++VTFLC+      Y+I+AG   FL +     + +T++GV       V Y
Sbjct: 132 MSVVPKVWKRLMVTFLCIFGAIFAYNIVAG---FLFITWFILLSDTSVGVVSFLAFLVLY 191

Query: 61  SVGLLYLVVVLQLAGVVSVLEESCGFKAIAKSRLLLKEKMALATIIVLTIYSGFGIFLWL 120
            VG++YL ++ QLA VVSVLEE+CG KA+ KSR L++ K+ +A II  T+     +F+ +
Sbjct: 192 FVGVVYLGIIWQLASVVSVLEEACGVKAMIKSRQLIRGKIWIAAIINFTL--NLSLFI-I 251

Query: 121 EDLVRKMLFSQSSMIMWMNVLGSLLLLLLILVFLLWRLVLETMFYFVCKSYHHESVDMLA 179
           + +  +++    S+ M   V   ++  LL+    L+ LV+ T+ YFVCKSYHHE++D  A
Sbjct: 252 QAVFERLVVHGRSLNMVNRVSYGIICFLLLFKLFLFGLVIHTVIYFVCKSYHHENIDKSA 308

[Close]

BLAST of Cla002452 vs. NCBI nr
Match: gi|659128751|ref|XP_008464353.1| (PREDICTED: uncharacterized protein LOC103502262 [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 4.8e-70
Identity = 142/187 (75.94%), Postives = 158/187 (84.49%), Query Frame = 1


Query: 1   MSVVAKVWKRVLVTFLCVLLVFLVYSIIAGCALFLIVLPLGKVDETTLGVAFVFYSVGLL 60
           MSVV KVWKR+LVTFLCV+LVF +Y +I G ALF+I+LPLGKVD TTLGVAFVFY VGLL
Sbjct: 119 MSVVVKVWKRLLVTFLCVILVFFIYHMIVGLALFIIILPLGKVDRTTLGVAFVFYFVGLL 178

Query: 61  YLVVVLQLAGVVSVLEESCGFKAIAKSRLLLKEKMALATIIVLTIYSGFGIFLWLEDLVR 120
           YLVVVLQL+GVVSVLEES GFKA+AKSRLLLKE M  AT+IVL IYSGFGI LWLE L R
Sbjct: 179 YLVVVLQLSGVVSVLEESSGFKAMAKSRLLLKENMVSATVIVLAIYSGFGILLWLEALTR 238

Query: 121 KMLFSQSSMI-MWMNVLGSLLLLLLILVFLLWRLVLETMFYFVCKSYHHESVDMLAISDQ 180
           KMLFS SS + +WM++LGSL L LLILVFLLWRLV ETM YFVCKSY HE +DM ++SD 
Sbjct: 239 KMLFSTSSTVAIWMHLLGSLSLDLLILVFLLWRLVSETMIYFVCKSYKHERIDMSSVSDH 298

Query: 181 DQDLLRS 187
           D  LL S
Sbjct: 299 DPILLGS 305

[Close]

BLAST of Cla002452 vs. NCBI nr
Match: gi|700192782|gb|KGN47986.1| (hypothetical protein Csa_6G421800 [Cucumis sativus])

HSP 1 Score: 262.3 bits (669), Expect = 6.4e-67
Identity = 134/186 (72.04%), Postives = 154/186 (82.80%), Query Frame = 1


Query: 1   MSVVAKVWKRVLVTFLCVLLVFLVYSIIAGCALFLIVLPLGKVDETTLGVAFVFYSVGLL 60
           MSVV  VWKR+LVTFLCV+LVFL+Y +I G ALF+I+LPLG+VD TTLGVAF+FY +GL 
Sbjct: 119 MSVVVTVWKRLLVTFLCVILVFLIYHMIVGLALFIIILPLGEVDRTTLGVAFLFYFIGLF 178

Query: 61  YLVVVLQLAGVVSVLEESCGFKAIAKSRLLLKEKMALATIIVLTIYSGFGIFLWLEDLVR 120
           YLVVVLQLAGVVSVLEES GFKA+  SRLLLKE M  AT+IVLTIYSGFGI LWL+ L +
Sbjct: 179 YLVVVLQLAGVVSVLEESRGFKAMENSRLLLKENMVSATVIVLTIYSGFGILLWLKALTK 238

Query: 121 KMLFSQSSMIMWMNVLGSLLLLLLILVFLLWRLVLETMFYFVCKSYHHESVDMLAISDQD 180
           KMLFS S++ +WM +LGSL L  LILVFLLWRLV ETM Y VCKSY+HES+D   +SD D
Sbjct: 239 KMLFSPSTVPIWMYLLGSLSLDFLILVFLLWRLVSETMIYLVCKSYNHESIDKTTLSDPD 298

Query: 181 QDLLRS 187
             LLRS
Sbjct: 299 PVLLRS 304

[Close]

BLAST of Cla002452 vs. NCBI nr
Match: gi|778721983|ref|XP_011658385.1| (PREDICTED: uncharacterized protein LOC105435982 [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 3.5e-65
Identity = 135/184 (73.37%), Postives = 152/184 (82.61%), Query Frame = 1


Query: 1   MSVVAKVWKRVLVTFLCVLLVFLVYSIIAGCALFLIVLPLGKVDETTLGVAFVFYSVGLL 60
           MSVV KVWKR+LVT LCV+LVFL+Y +I G ALF+I+LPLG VD TTLGVAFVFY VGLL
Sbjct: 1   MSVVVKVWKRLLVTNLCVILVFLIYHMIVGLALFIIILPLGTVDRTTLGVAFVFYFVGLL 60

Query: 61  YLVVVLQLAGVVSVLEESCGFKAIAKSRLLLKEKMALATIIVLTIYSGFGIFLWLEDLVR 120
           YLVVVLQLAGVVSVLEES GFKA+AKSRLLLKE M  AT+IVL I SGFGI LWL+ L R
Sbjct: 61  YLVVVLQLAGVVSVLEESRGFKAMAKSRLLLKENMVSATVIVLAISSGFGILLWLKSLTR 120

Query: 121 KMLFSQSSMIMWMNVLGSLLLLLLILVFLLWRLVLETMFYFVCKSYHHESVDMLAISDQD 180
            MLFS  S+ +WM+VL +L L L +LVFLLW LV ETMFYFVCKSY+HES+DM  +SD D
Sbjct: 121 MMLFS-PSVAIWMHVLATLSLDLWVLVFLLWSLVSETMFYFVCKSYNHESIDMSTVSDHD 180

Query: 181 QDLL 185
             LL
Sbjct: 181 PILL 183

[Close]

BLAST of Cla002452 vs. NCBI nr
Match: gi|700190705|gb|KGN45909.1| (hypothetical protein Csa_6G020230 [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 3.5e-65
Identity = 135/184 (73.37%), Postives = 152/184 (82.61%), Query Frame = 1


Query: 1   MSVVAKVWKRVLVTFLCVLLVFLVYSIIAGCALFLIVLPLGKVDETTLGVAFVFYSVGLL 60
           MSVV KVWKR+LVT LCV+LVFL+Y +I G ALF+I+LPLG VD TTLGVAFVFY VGLL
Sbjct: 45  MSVVVKVWKRLLVTNLCVILVFLIYHMIVGLALFIIILPLGTVDRTTLGVAFVFYFVGLL 104

Query: 61  YLVVVLQLAGVVSVLEESCGFKAIAKSRLLLKEKMALATIIVLTIYSGFGIFLWLEDLVR 120
           YLVVVLQLAGVVSVLEES GFKA+AKSRLLLKE M  AT+IVL I SGFGI LWL+ L R
Sbjct: 105 YLVVVLQLAGVVSVLEESRGFKAMAKSRLLLKENMVSATVIVLAISSGFGILLWLKSLTR 164

Query: 121 KMLFSQSSMIMWMNVLGSLLLLLLILVFLLWRLVLETMFYFVCKSYHHESVDMLAISDQD 180
            MLFS  S+ +WM+VL +L L L +LVFLLW LV ETMFYFVCKSY+HES+DM  +SD D
Sbjct: 165 MMLFS-PSVAIWMHVLATLSLDLWVLVFLLWSLVSETMFYFVCKSYNHESIDMSTVSDHD 224

Query: 181 QDLL 185
             LL
Sbjct: 225 PILL 227

[Close]

BLAST of Cla002452 vs. NCBI nr
Match: gi|659128735|ref|XP_008464345.1| (PREDICTED: uncharacterized protein LOC103502253 [Cucumis melo])

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31
Identity = 83/188 (44.15%), Postives = 124/188 (65.96%), Query Frame = 1


Query: 1   MSVVAKVWKRVLVTFLCVLLVFLVYSIIAGCA----LFLIVL---PLGKVDETTLGVAFV 60
           +S+V KVWKR++VTF CV   F  Y+++A  A    LF+++L   P G V+ +   V F+
Sbjct: 127 ISIVPKVWKRLVVTFFCVFASFFAYNLLAVFAFILLLFILLLQYGPFGDVNGSIFVVFFI 186

Query: 61  FYSVGLLYLVVVLQLAGVVSVLEESCGFKAIAKSRLLLKEKMALATIIVLTIYSGFGIFL 120
            Y +GLLYL VV+QL+ VV+VLEES GFKA+AKS+ LLK KM +AT+++L I     + +
Sbjct: 187 IYFIGLLYLSVVVQLSSVVTVLEESYGFKAMAKSKALLKGKMLVATLMLLLI--NISLVI 246

Query: 121 WLEDLVRKMLFSQSSMIMWMNVLGSLLLLLLILVFLLWRLVLETMFYFVCKSYHHESVDM 180
             +  V+ ++      I+   +LG ++ L L+L F LW+LVLET+ YFVCK +H E++D 
Sbjct: 247 IQQAFVKLVVHGVWFGIVGRGILG-IVCLFLLLNFFLWQLVLETVLYFVCKEHHQENIDK 306

Query: 181 LAISDQDQ 182
            A+S+  Q
Sbjct: 307 SALSNHLQ 311

The following BLAST results are available for this feature:

BLAST of Cla002452 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJQ4_CUCSA	4.5e-67	72.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G421800 PE=4 SV=1	[more]
A0A0A0K819_CUCSA	2.5e-65	73.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020230 PE=4 SV=1	[more]
A0A0A0KBZ8_CUCSA	1.2e-30	41.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020210 PE=4 SV=1	[more]
A0A151R5Q3_CAJCA	1.7e-29	45.36	Uncharacterized protein OS=Cajanus cajan GN=KK1_040979 PE=4 SV=1	[more]
B9S2N3_RICCO	1.4e-28	41.53	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0559550 PE=4 SV=1	[more]

BLAST of Cla002452 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128751\|ref\|XP_008464353.1\|	4.8e-70	75.94	PREDICTED: uncharacterized protein LOC103502262 [Cucumis melo]	[more]
gi\|700192782\|gb\|KGN47986.1\|	6.4e-67	72.04	hypothetical protein Csa_6G421800 [Cucumis sativus]	[more]
gi\|778721983\|ref\|XP_011658385.1\|	3.5e-65	73.37	PREDICTED: uncharacterized protein LOC105435982 [Cucumis sativus]	[more]
gi\|700190705\|gb\|KGN45909.1\|	3.5e-65	73.37	hypothetical protein Csa_6G020230 [Cucumis sativus]	[more]
gi\|659128735\|ref\|XP_008464345.1\|	1.5e-31	44.15	PREDICTED: uncharacterized protein LOC103502253 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla002452	Cla002452.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33133	FAMILY NOT NAMED	coord: 1..178 score: 5.8
None	No IPR available	PANTHER	PTHR33133:SF5	EXPRESSED PROTEIN	coord: 1..178 score: 5.8
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..31 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla002452	Cla97C08G146720	Watermelon (97103) v2	wmwmbB105
Cla002452	ClCG08G002850	Watermelon (Charleston Gray)	wcgwmB406
Cla002452	CSPI06G02760	Wild cucumber (PI 183967)	cpiwmB480
Cla002452	Cucsa.365690	Cucumber (Gy14) v1	cgywmB661
Cla002452	MELO3C026137.2	Melon (DHL92) v3.6.1	medwmB306
Cla002452	CsaV3_6G003000	Cucumber (Chinese Long) v3	cucwmB491
Cla002452	Bhi04G001717	Wax gourd	wgowmB321

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla002452	Melon (DHL92) v3.5.1	mewmB304
Cla002452	Watermelon (Charleston Gray)	wcgwmB410
Cla002452	Cucumber (Chinese Long) v2	cuwmB463
Cla002452	Bottle gourd (USVL1VR-Ls)	lsiwmB472
Cla002452	Cucumber (Gy14) v2	cgybwmB436