Cla002388 (gene) Watermelon (97103) v1

Overview
NameCla002388
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr9 : 25541545 .. 25541832 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCCAGAGATAACACATGATCAAGACCGTCGAATGGTGGTAAACATGGAGGAATGTGAGGCGTTGAAACGACCCGGTGAGGATGATCAAGAGGGTGTCGATGAATTCAAGAATCTTGGACAGGTAGAAGACATAAGCCCAGAAGAAGAGAGGTCCAACTGGTGGGATGCGAGGTGGAAAGCAGATAATCCAGTGGAGATGAGGCACATGATAAATGGAAGAAAGAGTGCATCCAAGGGCCATGATGAAGGAGAGGACAAGAAGGACAAAGTTATGAAGGGCTGA

mRNA sequence

ATGAAGCCAGAGATAACACATGATCAAGACCGTCGAATGGTGGTAAACATGGAGGAATGTGAGGCGTTGAAACGACCCGGTGAGGATGATCAAGAGGGTGTCGATGAATTCAAGAATCTTGGACAGGTAGAAGACATAAGCCCAGAAGAAGAGAGGTCCAACTGGTGGGATGCGAGGTGGAAAGCAGATAATCCAGTGGAGATGAGGCACATGATAAATGGAAGAAAGAGTGCATCCAAGGGCCATGATGAAGGAGAGGACAAGAAGGACAAAGTTATGAAGGGCTGA

Coding sequence (CDS)

ATGAAGCCAGAGATAACACATGATCAAGACCGTCGAATGGTGGTAAACATGGAGGAATGTGAGGCGTTGAAACGACCCGGTGAGGATGATCAAGAGGGTGTCGATGAATTCAAGAATCTTGGACAGGTAGAAGACATAAGCCCAGAAGAAGAGAGGTCCAACTGGTGGGATGCGAGGTGGAAAGCAGATAATCCAGTGGAGATGAGGCACATGATAAATGGAAGAAAGAGTGCATCCAAGGGCCATGATGAAGGAGAGGACAAGAAGGACAAAGTTATGAAGGGCTGA

Protein sequence

MKPEITHDQDRRMVVNMEECEALKRPGEDDQEGVDEFKNLGQVEDISPEEERSNWWDARWKADNPVEMRHMINGRKSASKGHDEGEDKKDKVMKG
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU79452watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla002388Cla002388.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU79452WMU79452transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla002388ClCG09G014370Watermelon (Charleston Gray)wcgwmB012
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla002388Watermelon (97103) v2wmwmbB045
Cla002388Wax gourdwgowmB246
Cla002388Cucurbita maxima (Rimu)cmawmB080
Cla002388Bottle gourd (USVL1VR-Ls)lsiwmB229
Cla002388Bottle gourd (USVL1VR-Ls)lsiwmB239