Cla002308 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCCAGCAACCCACCTCCTCCAAAAGCCCTAAACCTATTGCTTCAGCCTCGAGGCATGGTAGTTGGAATCTGTCCGCTACCTCCACCACAACGGAACCCCTCGCCATTGTTCGCCCTAATAGTCCTGAGTTGGAAGCGACATCATCACCATCTTCGCCACACTCCAGGGACCTGTCTGAAGCTCAAGAGGTGGAAAGGAATGACGAGTCCACCGTATTCGAAGACATTCTAGACACCATTGATGAAGAAGACGATGACTGGTTGGACGGGTTGGTCGACCAGAGGATGAAAAATGAATCACGTGGGTCAGTCCCTGCGATGAGTGGTCTTGAGGAGTCGAACTCCGATGAAAGACCTATTGGAAAGGTAATAGTGGCGGTGGAAAAGAAGAAGTTCGCCACGAAAAGGAAAATCAGGCCAATAAGGGCCAGGGAAGTAGAAGCCGAAGAAGATGTACCTCCGCTAAGAAGGAAAAATGAGAAAGTAAAGGACGTGGGGACATCCGAGACTATCGCATCATCTTTCGCCGCATCATCTGTTGAGCGGTTAGCAGCGAGGGCGGCAGAGAAGTCCAAGAAGCTAAAAGAAGACATCAAAAAGATGAATGAAAGGACGAAGTCGTTTCTCACCGCAAGGAAGAGGAGAAAAGAGGAAATCGCATCTGGCGTACAAACTGTCAAAGAGGCCACCAGAAAAGCTGAGTTTCTCTGTCGCATAGCAAACATTGCGACGGAATTAGAAGTTGAGTTGGAAGTGACTGATGCGACGAGGTCACCCAAAGCTGAACGCATCAAGAAGAATGTGAAAAAAATACGGGAGGAGAAGAAGAAAGAAAAAGAGGTAGCAATCACCAAGGGGAAGCTACCGGAGAAAAATAAGACTGAGGTGGCAAAGGCACCTGCAGTGGTTATAAGGGACTTGGACGCAGGCAGAGTAAGGAGAACGCCTGCTAGTCCCATCAGTAGGAATGAGAAGGGAAAAGAGAAATTGGTTGAGGAACCAACAGAGGAGGCGGCGAAAAGCCAAAAGACACAATTCAGTGGGCTCTACACTGAAGTGGGATTTTTCCTAGAGCCAATTGAGCTGCCTGCCTTCATCATACAAGGAGTCGACGCAATGGGTTGGAGACAATTTTGTGAAAGTGCCCAAGTCATCCAACCCACCGCCGTGGAGGCATTTTACGAAGGGGAACCATTCACCGCAAGGCACACATTGTCAAAGTTGAAGATGAGGTGA ATGGCTTCCCAGCAACCCACCTCCTCCAAAAGCCCTAAACCTATTGCTTCAGCCTCGAGGCATGGTAGTTGGAATCTGTCCGCTACCTCCACCACAACGGAACCCCTCGCCATTGTTCGCCCTAATAGTCCTGAGTTGGAAGCGACATCATCACCATCTTCGCCACACTCCAGGGACCTGTCTGAAGCTCAAGAGGTGGAAAGGAATGACGAGTCCACCGTATTCGAAGACATTCTAGACACCATTGATGAAGAAGACGATGACTGGTTGGACGGGTTGGTCGACCAGAGGATGAAAAATGAATCACGTGGGTCAGTCCCTGCGATGAGTGGTCTTGAGGAGTCGAACTCCGATGAAAGACCTATTGGAAAGGTAATAGTGGCGGTGGAAAAGAAGAAGTTCGCCACGAAAAGGAAAATCAGGCCAATAAGGGCCAGGGAAGTAGAAGCCGAAGAAGATGTACCTCCGCTAAGAAGGAAAAATGAGAAAGTAAAGGACGTGGGGACATCCGAGACTATCGCATCATCTTTCGCCGCATCATCTGTTGAGCGGTTAGCAGCGAGGGCGGCAGAGAAGTCCAAGAAGCTAAAAGAAGACATCAAAAAGATGAATGAAAGGACGAAGTCGTTTCTCACCGCAAGGAAGAGGAGAAAAGAGGAAATCGCATCTGGCGTACAAACTGTCAAAGAGGCCACCAGAAAAGCTGAGTTTCTCTGTCGCATAGCAAACATTGCGACGGAATTAGAAGTTGAGTTGGAAGTGACTGATGCGACGAGGTCACCCAAAGCTGAACGCATCAAGAAGAATGTGAAAAAAATACGGGAGGAGAAGAAGAAAGAAAAAGAGGTAGCAATCACCAAGGGGAAGCTACCGGAGAAAAATAAGACTGAGGTGGCAAAGGCACCTGCAGTGGTTATAAGGGACTTGGACGCAGGCAGAGTAAGGAGAACGCCTGCTAGTCCCATCAGTAGGAATGAGAAGGGAAAAGAGAAATTGGTTGAGGAACCAACAGAGGAGGCGGCGAAAAGCCAAAAGACACAATTCAGTGGGCTCTACACTGAAGTGGGATTTTTCCTAGAGCCAATTGAGCTGCCTGCCTTCATCATACAAGGAGTCGACGCAATGGGTTGGAGACAATTTTGTGAAAGTGCCCAAGTCATCCAACCCACCGCCGTGGAGGCATTTTACGAAGGGGAACCATTCACCGCAAGGCACACATTGTCAAAGTTGAAGATGAGGTGA ATGGCTTCCCAGCAACCCACCTCCTCCAAAAGCCCTAAACCTATTGCTTCAGCCTCGAGGCATGGTAGTTGGAATCTGTCCGCTACCTCCACCACAACGGAACCCCTCGCCATTGTTCGCCCTAATAGTCCTGAGTTGGAAGCGACATCATCACCATCTTCGCCACACTCCAGGGACCTGTCTGAAGCTCAAGAGGTGGAAAGGAATGACGAGTCCACCGTATTCGAAGACATTCTAGACACCATTGATGAAGAAGACGATGACTGGTTGGACGGGTTGGTCGACCAGAGGATGAAAAATGAATCACGTGGGTCAGTCCCTGCGATGAGTGGTCTTGAGGAGTCGAACTCCGATGAAAGACCTATTGGAAAGGTAATAGTGGCGGTGGAAAAGAAGAAGTTCGCCACGAAAAGGAAAATCAGGCCAATAAGGGCCAGGGAAGTAGAAGCCGAAGAAGATGTACCTCCGCTAAGAAGGAAAAATGAGAAAGTAAAGGACGTGGGGACATCCGAGACTATCGCATCATCTTTCGCCGCATCATCTGTTGAGCGGTTAGCAGCGAGGGCGGCAGAGAAGTCCAAGAAGCTAAAAGAAGACATCAAAAAGATGAATGAAAGGACGAAGTCGTTTCTCACCGCAAGGAAGAGGAGAAAAGAGGAAATCGCATCTGGCGTACAAACTGTCAAAGAGGCCACCAGAAAAGCTGAGTTTCTCTGTCGCATAGCAAACATTGCGACGGAATTAGAAGTTGAGTTGGAAGTGACTGATGCGACGAGGTCACCCAAAGCTGAACGCATCAAGAAGAATGTGAAAAAAATACGGGAGGAGAAGAAGAAAGAAAAAGAGGTAGCAATCACCAAGGGGAAGCTACCGGAGAAAAATAAGACTGAGGTGGCAAAGGCACCTGCAGTGGTTATAAGGGACTTGGACGCAGGCAGAGTAAGGAGAACGCCTGCTAGTCCCATCAGTAGGAATGAGAAGGGAAAAGAGAAATTGGTTGAGGAACCAACAGAGGAGGCGGCGAAAAGCCAAAAGACACAATTCAGTGGGCTCTACACTGAAGTGGGATTTTTCCTAGAGCCAATTGAGCTGCCTGCCTTCATCATACAAGGAGTCGACGCAATGGGTTGGAGACAATTTTGTGAAAGTGCCCAAGTCATCCAACCCACCGCCGTGGAGGCATTTTACGAAGGGGAACCATTCACCGCAAGGCACACATTGTCAAAGTTGAAGATGAGGTGA MASQQPTSSKSPKPIASASRHGSWNLSATSTTTEPLAIVRPNSPELEATSSPSSPHSRDLSEAQEVERNDESTVFEDILDTIDEEDDDWLDGLVDQRMKNESRGSVPAMSGLEESNSDERPIGKVIVAVEKKKFATKRKIRPIRAREVEAEEDVPPLRRKNEKVKDVGTSETIASSFAASSVERLAARAAEKSKKLKEDIKKMNERTKSFLTARKRRKEEIASGVQTVKEATRKAEFLCRIANIATELEVELEVTDATRSPKAERIKKNVKKIREEKKKEKEVAITKGKLPEKNKTEVAKAPAVVIRDLDAGRVRRTPASPISRNEKGKEKLVEEPTEEAAKSQKTQFSGLYTEVGFFLEPIELPAFIIQGVDAMGWRQFCESAQVIQPTAVEAFYEGEPFTARHTLSKLKMR
BLAST of Cla002308 vs. Swiss-Prot
Match: NST1_YARLI (Stress response protein NST1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=NST1 PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.1e-07 Identity = 62/245 (25.31%), Postives = 105/245 (42.86%), Query Frame = 1
BLAST of Cla002308 vs. Swiss-Prot
Match: SMC_AQUAE (Chromosome partition protein Smc OS=Aquifex aeolicus (strain VF5) GN=smc PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 4.8e-06 Identity = 61/245 (24.90%), Postives = 103/245 (42.04%), Query Frame = 1
BLAST of Cla002308 vs. TrEMBL
Match: B3L5S9_PLAKH (MAEBL OS=Plasmodium knowlesi (strain H) GN=PKH_094500 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 4.7e-08 Identity = 69/298 (23.15%), Postives = 121/298 (40.60%), Query Frame = 1
BLAST of Cla002308 vs. TrEMBL
Match: Q64JV4_PLAVI (Merozoite surface protein 3b (Fragment) OS=Plasmodium vivax PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.4e-07 Identity = 87/351 (24.79%), Postives = 139/351 (39.60%), Query Frame = 1
BLAST of Cla002308 vs. TrEMBL
Match: A0A0D4JCH9_STREE (Pneumococcal surface protein (Fragment) OS=Streptococcus pneumoniae GN=pspK PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 4.0e-07 Identity = 85/339 (25.07%), Postives = 135/339 (39.82%), Query Frame = 1
BLAST of Cla002308 vs. TrEMBL
Match: A0A0R0M2V0_9MICR (Uncharacterized protein (Fragment) OS=Pseudoloma neurophilia GN=M153_982000585 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 6.7e-07 Identity = 63/250 (25.20%), Postives = 112/250 (44.80%), Query Frame = 1
BLAST of Cla002308 vs. TrEMBL
Match: A0A0R0M2V0_9MICR (Uncharacterized protein (Fragment) OS=Pseudoloma neurophilia GN=M153_982000585 PE=4 SV=1) HSP 1 Score: 43.9 bits (102), Expect = 5.5e-01 Identity = 71/322 (22.05%), Postives = 134/322 (41.61%), Query Frame = 1
HSP 2 Score: 63.2 bits (152), Expect = 8.8e-07 Identity = 68/259 (26.25%), Postives = 106/259 (40.93%), Query Frame = 1
BLAST of Cla002308 vs. NCBI nr
Match: gi|805789896|ref|XP_012141575.1| (PREDICTED: microtubule-associated protein futsch, partial [Megachile rotundata]) HSP 1 Score: 71.2 bits (173), Expect = 4.6e-09 Identity = 107/400 (26.75%), Postives = 170/400 (42.50%), Query Frame = 1
BLAST of Cla002308 vs. NCBI nr
Match: gi|41814736|gb|AAS10478.1| (merozoite surface protein 3b, partial [Plasmodium vivax]) HSP 1 Score: 65.9 bits (159), Expect = 1.9e-07 Identity = 87/351 (24.79%), Postives = 139/351 (39.60%), Query Frame = 1
BLAST of Cla002308 vs. NCBI nr
Match: gi|41814714|gb|AAS10467.1| (merozoite surface protein 3b, partial [Plasmodium vivax]) HSP 1 Score: 62.4 bits (150), Expect = 2.2e-06 Identity = 84/368 (22.83%), Postives = 151/368 (41.03%), Query Frame = 1
BLAST of Cla002308 vs. NCBI nr
Match: gi|817063392|ref|XP_012253395.1| (PREDICTED: uncharacterized protein LOC105684553 isoform X5 [Athalia rosae]) HSP 1 Score: 62.0 bits (149), Expect = 2.8e-06 Identity = 75/302 (24.83%), Postives = 124/302 (41.06%), Query Frame = 1
BLAST of Cla002308 vs. NCBI nr
Match: gi|817063398|ref|XP_012253398.1| (PREDICTED: nesprin-1 isoform X7 [Athalia rosae]) HSP 1 Score: 62.0 bits (149), Expect = 2.8e-06 Identity = 75/302 (24.83%), Postives = 124/302 (41.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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