Cla002134 (gene) Watermelon (97103) v1

NameCla002134
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr3 : 11603790 .. 11604491 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGGAGGCAATTTTGCGAAAGTACCCAAGTCATCCAACCCACCGCTGTGGAGGCATTTTACAAAGGAACCATTCACTGCAAGGCACACATTGTCAAAGTTGAAGATGAGGTGATTTCCTTCGAGCCTCAGCAGATCAACGGATTGTTTGATCTTCCCGACATCGCGGCGGCAGAGGGTAATAGAATAATGTCGACGCCTACAGAAGCCGAAATGAATGACGCCCTCACAACCATCGCCAAACCGGGGTCAGAGTGGAATACTTCCCCAAAGGGCATTCAGACATTGGCGCCAAATTGCTTGATTGCCAAGGCCAACCTGTGGCTTTACTTCATCAAGCGGTCGCTGATCCCCACAACACATGACGCCTCAATTTCAAGGGACCGTGCCATGGTCATTTATTGCATCATGCGGGGAATTCAGCTAGATATGGGACGCATCATTGCCCCACAGATTCAGGGGTTGTTTTTTAAGCCAAGGGGTCAGCTATTCTTCCCCTTTCTTGTGACAAGACTGTGTGCCAACGCAGAATTCATGGAGGATGCGCCAGTCAGAGCAATGAATGGAATCCTTTCAGCGCAAAGTTTGAGACGGATATTAAAGGACTCACCGCATCTGCTTGACGCGGCCAACTTAAAGAAGAGGTCGACCAAGTCACAAGAACCATCATCCCCTGACCTTTTCAACCCAAGAAGATGA

mRNA sequence

ATGGGTTGGAGGCAATTTTGCGAAAGTACCCAAGTCATCCAACCCACCGCTGTGGAGGCATTTTACAAAGGAACCATTCACTGCAAGGCACACATTGTCAAAGTTGAAGATGAGGTGATTTCCTTCGAGCCTCAGCAGATCAACGGATTGTTTGATCTTCCCGACATCGCGGCGGCAGAGGGTAATAGAATAATGTCGACGCCTACAGAAGCCGAAATGAATGACGCCCTCACAACCATCGCCAAACCGGGGTCAGAGTGGAATACTTCCCCAAAGGGCATTCAGACATTGGCGCCAAATTGCTTGATTGCCAAGGCCAACCTGTGGCTTTACTTCATCAAGCGGTCGCTGATCCCCACAACACATGACGCCTCAATTTCAAGGGACCGTGCCATGGTCATTTATTGCATCATGCGGGGAATTCAGCTAGATATGGGACGCATCATTGCCCCACAGATTCAGGGGTTGTTTTTTAAGCCAAGGGGTCAGCTATTCTTCCCCTTTCTTGTGACAAGACTGTGTGCCAACGCAGAATTCATGGAGGATGCGCCAGTCAGAGCAATGAATGGAATCCTTTCAGCGCAAAGTTTGAGACGGATATTAAAGGACTCACCGCATCTGCTTGACGCGGCCAACTTAAAGAAGAGGTCGACCAAGTCACAAGAACCATCATCCCCTGACCTTTTCAACCCAAGAAGATGA

Coding sequence (CDS)

ATGGGTTGGAGGCAATTTTGCGAAAGTACCCAAGTCATCCAACCCACCGCTGTGGAGGCATTTTACAAAGGAACCATTCACTGCAAGGCACACATTGTCAAAGTTGAAGATGAGGTGATTTCCTTCGAGCCTCAGCAGATCAACGGATTGTTTGATCTTCCCGACATCGCGGCGGCAGAGGGTAATAGAATAATGTCGACGCCTACAGAAGCCGAAATGAATGACGCCCTCACAACCATCGCCAAACCGGGGTCAGAGTGGAATACTTCCCCAAAGGGCATTCAGACATTGGCGCCAAATTGCTTGATTGCCAAGGCCAACCTGTGGCTTTACTTCATCAAGCGGTCGCTGATCCCCACAACACATGACGCCTCAATTTCAAGGGACCGTGCCATGGTCATTTATTGCATCATGCGGGGAATTCAGCTAGATATGGGACGCATCATTGCCCCACAGATTCAGGGGTTGTTTTTTAAGCCAAGGGGTCAGCTATTCTTCCCCTTTCTTGTGACAAGACTGTGTGCCAACGCAGAATTCATGGAGGATGCGCCAGTCAGAGCAATGAATGGAATCCTTTCAGCGCAAAGTTTGAGACGGATATTAAAGGACTCACCGCATCTGCTTGACGCGGCCAACTTAAAGAAGAGGTCGACCAAGTCACAAGAACCATCATCCCCTGACCTTTTCAACCCAAGAAGATGA

Protein sequence

MGWRQFCESTQVIQPTAVEAFYKGTIHCKAHIVKVEDEVISFEPQQINGLFDLPDIAAAEGNRIMSTPTEAEMNDALTTIAKPGSEWNTSPKGIQTLAPNCLIAKANLWLYFIKRSLIPTTHDASISRDRAMVIYCIMRGIQLDMGRIIAPQIQGLFFKPRGQLFFPFLVTRLCANAEFMEDAPVRAMNGILSAQSLRRILKDSPHLLDAANLKKRSTKSQEPSSPDLFNPRR
BLAST of Cla002134 vs. TrEMBL
Match: W9QTD9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022412 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-17
Identity = 58/202 (28.71%), Postives = 100/202 (49.50%), Query Frame = 1

Query: 2   GWRQFCESTQVIQPTAVEAFYKGTIHCKAHIVKVEDEVISFEPQQINGLFDLPDIAAAEG 61
           GWRQFC+         V  FY   +      V V++  + F  + IN +F L ++   E 
Sbjct: 15  GWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSIFGLEEVVD-EY 74

Query: 62  NRIMSTPTEAEMNDALTTIAKPGSEWNTSPKGIQTLAPNCLIAKANLWLYFIKRSLIPTT 121
               S  T+ ++   L  +A  G+ W  SP+G  T     L   A +W +F+    +P+T
Sbjct: 75  VDFASEVTDEQLEVVLAEVAIEGATWQISPQGAYTCIRKELKRHAQIWYHFLTARFMPST 134

Query: 122 HDASISRDRAMVIYCIMRGIQLDMGRIIAPQIQGL-FFKPRGQLFFPFLVTRLC--ANAE 181
           H  ++++DR +++Y I+ GI +++  I   +I+     + RG L+FP L+T+L   AN  
Sbjct: 135 HGKTVAKDRVLLLYSILTGISVNIEEITIKEIKACSAARKRGGLYFPSLITQLWLKANVP 194

Query: 182 FMEDAPVRAMNGILSAQSLRRI 201
           + +D  +    G +S  S+ RI
Sbjct: 195 YHKDEAIVHNAGAISTLSISRI 215

BLAST of Cla002134 vs. TrEMBL
Match: W9RBS1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000844 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.6e-16
Identity = 63/225 (28.00%), Postives = 110/225 (48.89%), Query Frame = 1

Query: 2   GWRQFCESTQVIQPTAVEAFYKGTIHCKAHIVKVEDEVISFEPQQINGLFDLPDIAAAEG 61
           GW+ FC          V+ FY    +   + V V +  I+F    ING+  +P+    E 
Sbjct: 87  GWQIFCRHPIDPIVPLVKEFYANLQNQGQNTVFVWEIDITFTSNYINGVLGIPN-QDDEF 146

Query: 62  NRIMSTPTEAEMNDALTTIAKPGSEWNTSPKGIQTLAPNCLIAKANLWLYFIKRSLIPTT 121
             +++   E ++ + L TIA  G++W  S KG  T   + L   A +W +F+   L+ +T
Sbjct: 147 VELITDAIEEQLKEVLKTIAILGAQWLLSAKGSYTCNRHELQPAAKVWYHFLASRLLLST 206

Query: 122 HDASISRDRAMVIYCIMRGIQLDMGRIIAPQIQGLFFKPRGQLFFPFLVTRLCANAEFME 181
           H  +ISR+RA+++Y ++ G  +++GR+I  QI+    K +G L+FP L++ LC  +    
Sbjct: 207 HGKTISRNRAILLYAVLVGKPINVGRLIIDQIRACAEKGKGGLYFPSLISELCIQSHVAW 266

Query: 182 DAPVRAMNGILSAQSLRRILKDSPHLLDAANLKKRSTKSQEPSSP 227
           +A    +     A  L  I + S    + +   +   +  EPS P
Sbjct: 267 EASEPRLRN-TGAMDLVAITRISSGRSEKSEKGEEEEEQDEPSRP 309

BLAST of Cla002134 vs. TrEMBL
Match: W9S7D3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006967 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.5e-14
Identity = 40/128 (31.25%), Postives = 75/128 (58.59%), Query Frame = 1

Query: 47  INGLFDLPDIAAAEGNRIMSTPTEAEMNDALTTIAKPGSEWNTSPKGIQTLAPNCLIAKA 106
           IN L+DLPD+     N    +  E ++++ +  +   G+EW  + +G  T    CL    
Sbjct: 99  INSLYDLPDVED-HFNSFADSLNEDQLDEVINELCVEGTEWWRATRGSMTFPKECLQPGP 158

Query: 107 NLWLYFIKRSLIPTTHDASISRDRAMVIYCIMRGIQLDMGRIIAPQIQGLFFKPRGQLFF 166
            +W +F++  L+P++H   + ++RA+++YC+M+G  L++GR+I  Q+     +  G L+F
Sbjct: 159 KIWYHFLRFRLMPSSHYRLVHKERAILLYCMMKGRPLNVGRMIRQQVGVCAGRKNGGLWF 218

Query: 167 PFLVTRLC 175
           P L+T+LC
Sbjct: 219 PSLITQLC 225

BLAST of Cla002134 vs. TrEMBL
Match: A0A061FAJ6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_032752 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-11
Identity = 40/151 (26.49%), Postives = 76/151 (50.33%), Query Frame = 1

Query: 3   WRQFCESTQVIQPTAVEAFYKGTIHCKAHIVKVEDEVISFEPQQINGLFDLPDIAAAEGN 62
           W QFC    V+    V  FY   +     +  V  + + F  Q IN L   P+I   E  
Sbjct: 62  WHQFCHQPNVVVVLVVREFYATVVEHVDGVAFVRGKHVPFHSQAINELLRTPNIENDEYG 121

Query: 63  RIMSTPTEAEMNDALTTIAKPGSEWNTSPKGIQTLAPNCLIAKANLWLYFIKRSLIPTTH 122
           + +      + N+ ++T+   G++W TS     +   + +  +  +WL+F+   L+P+TH
Sbjct: 122 QYLGD--HQDCNEIISTLCIEGAQWKTSHGEPVSFKRSVMKKELKVWLHFVAARLLPSTH 181

Query: 123 DASISRDRAMVIYCIMRGIQLDMGRIIAPQI 154
            + +++DRA++IY I+    +D+G++I+  I
Sbjct: 182 ISDVTKDRAVLIYAIVTHKSIDVGKVISHAI 210

BLAST of Cla002134 vs. TrEMBL
Match: W9S496_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003435 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.7e-10
Identity = 58/232 (25.00%), Postives = 96/232 (41.38%), Query Frame = 1

Query: 2   GWRQFCESTQVIQPTAVEAFYKGTIHCKAHIVKVEDEVISFEPQQINGLFDLPDIAAAEG 61
           GW +FC        T V  F+     C  +  KV   VI F+ + IN  F +P  ++ + 
Sbjct: 8   GWEKFCSEPTAGSTTLVREFFANVRKCTRNKTKVRGRVIKFDAETINNHFGIPSPSSDQQ 67

Query: 62  NRIMSTPTEAEMNDALTTIAKPGSEWNTSPKGIQTLAPNCLIAKANLWLYFIKRSLIPTT 121
             +     + +  + L  +    + W              L     +W +F+   LI +T
Sbjct: 68  QNL----PDRDPQEILEALCDGPARWTIKQNTESAFEARYLANYTKVWFHFVCTRLILST 127

Query: 122 HDASISRDRAMVIYCIMRGIQLDMGRIIAPQIQGLFFKPRGQLFFPFLVTRL-CANAEFM 181
           H + +++DRA+V+  I +G  L++G II   I     K    L +P L+T L  A    +
Sbjct: 128 HISEVTKDRALVLLAIEKGEPLNVGAIINSCIHHALRKHNISLPYPSLLTELFLAAGVAL 187

Query: 182 EDA----PVRA--MNGILSAQSLRRILKDSPHLLDAANLKKRSTKSQEPSSP 227
            DA    P+RA  +N I+   S R           AA+ +    +S +P  P
Sbjct: 188 PDAHLEKPIRAFDLNSIMQIASGR-----------AASEQDGGAESSQPPQP 224

BLAST of Cla002134 vs. NCBI nr
Match: gi|703087370|ref|XP_010093253.1| (hypothetical protein L484_022412 [Morus notabilis])

HSP 1 Score: 97.1 bits (240), Expect = 4.5e-17
Identity = 58/202 (28.71%), Postives = 100/202 (49.50%), Query Frame = 1

Query: 2   GWRQFCESTQVIQPTAVEAFYKGTIHCKAHIVKVEDEVISFEPQQINGLFDLPDIAAAEG 61
           GWRQFC+         V  FY   +      V V++  + F  + IN +F L ++   E 
Sbjct: 15  GWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSIFGLEEVVD-EY 74

Query: 62  NRIMSTPTEAEMNDALTTIAKPGSEWNTSPKGIQTLAPNCLIAKANLWLYFIKRSLIPTT 121
               S  T+ ++   L  +A  G+ W  SP+G  T     L   A +W +F+    +P+T
Sbjct: 75  VDFASEVTDEQLEVVLAEVAIEGATWQISPQGAYTCIRKELKRHAQIWYHFLTARFMPST 134

Query: 122 HDASISRDRAMVIYCIMRGIQLDMGRIIAPQIQGL-FFKPRGQLFFPFLVTRLC--ANAE 181
           H  ++++DR +++Y I+ GI +++  I   +I+     + RG L+FP L+T+L   AN  
Sbjct: 135 HGKTVAKDRVLLLYSILTGISVNIEEITIKEIKACSAARKRGGLYFPSLITQLWLKANVP 194

Query: 182 FMEDAPVRAMNGILSAQSLRRI 201
           + +D  +    G +S  S+ RI
Sbjct: 195 YHKDEAIVHNAGAISTLSISRI 215

BLAST of Cla002134 vs. NCBI nr
Match: gi|703082781|ref|XP_010092041.1| (hypothetical protein L484_000844 [Morus notabilis])

HSP 1 Score: 94.0 bits (232), Expect = 3.8e-16
Identity = 63/225 (28.00%), Postives = 110/225 (48.89%), Query Frame = 1

Query: 2   GWRQFCESTQVIQPTAVEAFYKGTIHCKAHIVKVEDEVISFEPQQINGLFDLPDIAAAEG 61
           GW+ FC          V+ FY    +   + V V +  I+F    ING+  +P+    E 
Sbjct: 87  GWQIFCRHPIDPIVPLVKEFYANLQNQGQNTVFVWEIDITFTSNYINGVLGIPN-QDDEF 146

Query: 62  NRIMSTPTEAEMNDALTTIAKPGSEWNTSPKGIQTLAPNCLIAKANLWLYFIKRSLIPTT 121
             +++   E ++ + L TIA  G++W  S KG  T   + L   A +W +F+   L+ +T
Sbjct: 147 VELITDAIEEQLKEVLKTIAILGAQWLLSAKGSYTCNRHELQPAAKVWYHFLASRLLLST 206

Query: 122 HDASISRDRAMVIYCIMRGIQLDMGRIIAPQIQGLFFKPRGQLFFPFLVTRLCANAEFME 181
           H  +ISR+RA+++Y ++ G  +++GR+I  QI+    K +G L+FP L++ LC  +    
Sbjct: 207 HGKTISRNRAILLYAVLVGKPINVGRLIIDQIRACAEKGKGGLYFPSLISELCIQSHVAW 266

Query: 182 DAPVRAMNGILSAQSLRRILKDSPHLLDAANLKKRSTKSQEPSSP 227
           +A    +     A  L  I + S    + +   +   +  EPS P
Sbjct: 267 EASEPRLRN-TGAMDLVAITRISSGRSEKSEKGEEEEEQDEPSRP 309

BLAST of Cla002134 vs. NCBI nr
Match: gi|703121924|ref|XP_010102456.1| (hypothetical protein L484_006967 [Morus notabilis])

HSP 1 Score: 87.4 bits (215), Expect = 3.5e-14
Identity = 40/128 (31.25%), Postives = 75/128 (58.59%), Query Frame = 1

Query: 47  INGLFDLPDIAAAEGNRIMSTPTEAEMNDALTTIAKPGSEWNTSPKGIQTLAPNCLIAKA 106
           IN L+DLPD+     N    +  E ++++ +  +   G+EW  + +G  T    CL    
Sbjct: 99  INSLYDLPDVED-HFNSFADSLNEDQLDEVINELCVEGTEWWRATRGSMTFPKECLQPGP 158

Query: 107 NLWLYFIKRSLIPTTHDASISRDRAMVIYCIMRGIQLDMGRIIAPQIQGLFFKPRGQLFF 166
            +W +F++  L+P++H   + ++RA+++YC+M+G  L++GR+I  Q+     +  G L+F
Sbjct: 159 KIWYHFLRFRLMPSSHYRLVHKERAILLYCMMKGRPLNVGRMIRQQVGVCAGRKNGGLWF 218

Query: 167 PFLVTRLC 175
           P L+T+LC
Sbjct: 219 PSLITQLC 225

BLAST of Cla002134 vs. NCBI nr
Match: gi|590612524|ref|XP_007022408.1| (Uncharacterized protein TCM_032752 [Theobroma cacao])

HSP 1 Score: 78.6 bits (192), Expect = 1.6e-11
Identity = 40/151 (26.49%), Postives = 76/151 (50.33%), Query Frame = 1

Query: 3   WRQFCESTQVIQPTAVEAFYKGTIHCKAHIVKVEDEVISFEPQQINGLFDLPDIAAAEGN 62
           W QFC    V+    V  FY   +     +  V  + + F  Q IN L   P+I   E  
Sbjct: 62  WHQFCHQPNVVVVLVVREFYATVVEHVDGVAFVRGKHVPFHSQAINELLRTPNIENDEYG 121

Query: 63  RIMSTPTEAEMNDALTTIAKPGSEWNTSPKGIQTLAPNCLIAKANLWLYFIKRSLIPTTH 122
           + +      + N+ ++T+   G++W TS     +   + +  +  +WL+F+   L+P+TH
Sbjct: 122 QYLGD--HQDCNEIISTLCIEGAQWKTSHGEPVSFKRSVMKKELKVWLHFVAARLLPSTH 181

Query: 123 DASISRDRAMVIYCIMRGIQLDMGRIIAPQI 154
            + +++DRA++IY I+    +D+G++I+  I
Sbjct: 182 ISDVTKDRAVLIYAIVTHKSIDVGKVISHAI 210

BLAST of Cla002134 vs. NCBI nr
Match: gi|703151436|ref|XP_010110119.1| (hypothetical protein L484_003435 [Morus notabilis])

HSP 1 Score: 73.6 bits (179), Expect = 5.3e-10
Identity = 58/232 (25.00%), Postives = 96/232 (41.38%), Query Frame = 1

Query: 2   GWRQFCESTQVIQPTAVEAFYKGTIHCKAHIVKVEDEVISFEPQQINGLFDLPDIAAAEG 61
           GW +FC        T V  F+     C  +  KV   VI F+ + IN  F +P  ++ + 
Sbjct: 8   GWEKFCSEPTAGSTTLVREFFANVRKCTRNKTKVRGRVIKFDAETINNHFGIPSPSSDQQ 67

Query: 62  NRIMSTPTEAEMNDALTTIAKPGSEWNTSPKGIQTLAPNCLIAKANLWLYFIKRSLIPTT 121
             +     + +  + L  +    + W              L     +W +F+   LI +T
Sbjct: 68  QNL----PDRDPQEILEALCDGPARWTIKQNTESAFEARYLANYTKVWFHFVCTRLILST 127

Query: 122 HDASISRDRAMVIYCIMRGIQLDMGRIIAPQIQGLFFKPRGQLFFPFLVTRL-CANAEFM 181
           H + +++DRA+V+  I +G  L++G II   I     K    L +P L+T L  A    +
Sbjct: 128 HISEVTKDRALVLLAIEKGEPLNVGAIINSCIHHALRKHNISLPYPSLLTELFLAAGVAL 187

Query: 182 EDA----PVRA--MNGILSAQSLRRILKDSPHLLDAANLKKRSTKSQEPSSP 227
            DA    P+RA  +N I+   S R           AA+ +    +S +P  P
Sbjct: 188 PDAHLEKPIRAFDLNSIMQIASGR-----------AASEQDGGAESSQPPQP 224

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
W9QTD9_9ROSA3.1e-1728.71Uncharacterized protein OS=Morus notabilis GN=L484_022412 PE=4 SV=1[more]
W9RBS1_9ROSA2.6e-1628.00Uncharacterized protein OS=Morus notabilis GN=L484_000844 PE=4 SV=1[more]
W9S7D3_9ROSA2.5e-1431.25Uncharacterized protein OS=Morus notabilis GN=L484_006967 PE=4 SV=1[more]
A0A061FAJ6_THECC1.1e-1126.49Uncharacterized protein OS=Theobroma cacao GN=TCM_032752 PE=4 SV=1[more]
W9S496_9ROSA3.7e-1025.00Uncharacterized protein OS=Morus notabilis GN=L484_003435 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|703087370|ref|XP_010093253.1|4.5e-1728.71hypothetical protein L484_022412 [Morus notabilis][more]
gi|703082781|ref|XP_010092041.1|3.8e-1628.00hypothetical protein L484_000844 [Morus notabilis][more]
gi|703121924|ref|XP_010102456.1|3.5e-1431.25hypothetical protein L484_006967 [Morus notabilis][more]
gi|590612524|ref|XP_007022408.1|1.6e-1126.49Uncharacterized protein TCM_032752 [Theobroma cacao][more]
gi|703151436|ref|XP_010110119.1|5.3e-1025.00hypothetical protein L484_003435 [Morus notabilis][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla002134Cla002134.1mRNA