Cla002060 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGTCAAGACCGGAACTTCAAGCTCCTCCAGAAATATTCTACAACGATGCTGAGGCTCGAAAATATACTTCATCCTCGCGTATCATTGAAATTCAGGTAGGCCTACCATTGATCTTTAAATGATGCCTTTCCTTGTCTAAATTTTGGTCTTAGAAAGTGGCAGTGATACGTATTATCTAGCTCAAAAAGGACACTCTAGTTATGGAGAAGGATTTTTCATTGGTAAATTTAGGCTACTGACTTTGTTTCTGACTTTTAGTACGGGGTGCAGGGCCTTTTAGAAAAATAGAAGTGCTTTCTCCATGCTGTATGAGTTTGCTTATGTGTTTGTTGGTTTATGTTGAAGGCAAAAATCACAGATAGAGCATTGGAGCTTCTTGCTTTGCCTGATGACGGAGTACCCAGATTGCTTCTTGATATTGGTATTTGCCTTTCTCCACATATACTATTAGTCTTGAAATGTTAAAATTGAAAGATTCAAGGGCATATCTCTTATGGGTTAATATCTTGTTTTTCTCATGTGTCTTAGATGATGAATTTGAGCACAAATCTTCTATTTTTATTTCCATGTTTATATTCATCCTTTTAGTGTCTTATGGAATTCGATGAGAATGATACATTCAAGTCCATTTGATGTGGCAATAGACTACAATGTATTATCGTGCTTGATAAAAGATAATTGGACAAAGCCATGCTTTTTAGTTAGCTTTCAGATTTCATGCAAGTTCTTGTATGCCTTTAAAAGGATTATTCTGAACACGCATGCTTGAATACTTCAGGCTGTGGATCGGGTCTAAGTGGAGAAACATTGTCGGAGCATGGACACCAATGGATTGGCTTGGATATCTCTCAATCAATGCTTAGTACGTGAATGATTTAAATTAATCTGAATATATAGTCAAATATATTATTACTTCCAGGAACTTCCTTCACTTTGCCGTCTTTACAATGCTCTCTTCTTTAAAAAAATTCAGATGTTGCATTGGAGCGGGAGACTGATGGTGACCTTTTACTTGGTGACATGGGTCAGGTACTTCATTCGTGAGAATGCAAGCAAACTAGTTTGCGTTTGTTCTCTTTTTCTTTTTTTCTTTTCTTTTTTTTTTTTTTTTGAAGACAACCTAATTTATTATTAGCGTTCACTTTATTTAAAAGCATATTGTTTTTTTCAAGTAACAATCAAAATCCAATTACAATATGAGAAGAAGGTTTATCTTATTTTAAAAAAGATTCCTGAATCATGTGTTGTTGCACTCTGGTGCAGGGCTTAGGAATTCGTCCTGGAGTTATTGATGGGGCTATTAGTATCTCTGCAGTTCAGGTTTGCCACTTTGCTTTTGTTTGTGGTTATTGAGTTATCATTTATCATTGTAAGGTTGTCGTGGGGTTTAAGTTTCAACTTTGTCCTAATGTTTCAAAGTGTAATATTAGCAAGATCTTGCCTCATCCTTTCTGGTTCTTATTTTCCTGATTGCATGACCGATTTATTAGCTTTGGGAGTTGAAGTGCAGTTCTTAAATTATTTACTAGGTGGTATTAAAAATAAGTTGATTATTTGAGGGGATATCTCACTTTTTTTTTTTTTTTACAGTTAAAAGTTCCTCCTAAGAATTGCTTCTCTGATAGTTTTTTTTTTTTTTTTAATGGATTAGTTTCCTGTTAAATTTTTGGCATTAAAATGTATTTCATTACTCTATACTTAGGAAGTCAAAGCTTCTGCACAGTTTCCCATTTATCTTACTAATTGATCTTCCATTTTTATTTATTTATTTTATTTGTTATAATTGTACAGTGGTTGTGCAACGCTGACAAGTCCTCTCATAATCCACGACTAAGATTGAAGTATGCTTTACAAATTTCTCCCCATCTTTAAGAATAACCTGCATGCTGCTTGAAATATTGACAGATGAATTAGATTCATAAATGAAATATATATGTACTAAGTTTTTTTTGGGCTCACATCCTTTTAGGGCATTCTTTGAATCACTATACAAATGCTTAGCAAGGGGTGCAAGAGCAGTGTTGCAAGTTTATCCTGAAAATGTGCACCAACGTGAGTTGATTCTAGGTTTTGCTATGCGCGCAGGATTTGCTGGTGGTGTAGTCGTTGATTACCCACACAGGTATATGTTTAATCTTTTTGAAATGAATGTGTATCGTGAAACCTTATTCAAAATTTATCTACACTGCCTTTTACTGATCTCAAGTTTCTTTTCTCCCCTTTGCTTTTATGGCCCCCTTGTGAAATTGTATGTCAATAGGATCTGTTCTATAGGTTGTTGTCTTTGAGTTCAATATAATGGAGGGTATATGCTAATTTTATTCTCAAAGCAAAATGTTGTCATAATGAAGGCTATAACGACCTTGAATAGGATCTGTTCTACAGGTTATAGGTTGTACAATTGTGAACAGGTTATAGGTTGTACAATTGTGTCCTTGAGTTCAACATAGATGATATATGCTAATTTTAATTCTCAAAGCAAAAAAGTTGCAAAATGAAGTGAAAAGCAAAGCAAAGTGAAATCTTATTGTAATTCTAGAAGGATATTCAGATGATGTTGATTATTGGTATAGTTAGTTAGGTTTCAGTTATGCTATGGGAATTTGGATGGATTGCTAACTCAAGCATGATGTATACAATACACAGTGCGAGGAGTAGAAAAGAGTACCTGGTGCTTACGTGTGGTCCACCATCCATTAGTACAACTGTTCCAAAGGGAAAGGATGGAGACTATGAGAGCTGTTCCGATGATGATATTGGTGAAGATGATGAAAATGAAACCGTATGCTTTTATGCTGCCTATTCGCACTCTATCAACGACTTTCCTTTGATATATATGAATAAATGGTTTGGATTTGAAAATGATTGTAAAATGCATTGTTTGGATTGTAGGTTCGTATGGCAGCGCCAAGGAAAAGACAGAAAATTACAAAGAGACGCAAAGGAAGAGAGTGGGTACTGAAGAAGAAGGAACAAATGAGAAGAAAAGGGAACGTTGTGCCTCCTGACTCTAAATACACGGCTCGGAAACGCAAGGCCCGTTTTTGA ATGACGTCAAGACCGGAACTTCAAGCTCCTCCAGAAATATTCTACAACGATGCTGAGGCTCGAAAATATACTTCATCCTCGCGTATCATTGAAATTCAGGCAAAAATCACAGATAGAGCATTGGAGCTTCTTGCTTTGCCTGATGACGGAGTACCCAGATTGCTTCTTGATATTGGCTGTGGATCGGGTCTAAGTGGAGAAACATTGTCGGAGCATGGACACCAATGGATTGGCTTGGATATCTCTCAATCAATGCTTAATGTTGCATTGGAGCGGGAGACTGATGGTGACCTTTTACTTGGTGACATGGGTCAGGGCTTAGGAATTCGTCCTGGAGTTATTGATGGGGCTATTAGTATCTCTGCAGTTCAGTGGTTGTGCAACGCTGACAAGTCCTCTCATAATCCACGACTAAGATTGAAGGCATTCTTTGAATCACTATACAAATGCTTAGCAAGGGGTGCAAGAGCAGTGTTGCAAGTTTATCCTGAAAATGTGCACCAACGTGAGTTGATTCTAGGTTTTGCTATGCGCGCAGGATTTGCTGGTGGTGTAGTCGTTGATTACCCACACAGTGCGAGGAGTAGAAAAGAGTACCTGGTGCTTACGTGTGGTCCACCATCCATTAGTACAACTGTTCCAAAGGGAAAGGATGGAGACTATGAGAGCTGTTCCGATGATGATATTGGTGAAGATGATGAAAATGAAACCGTTCGTATGGCAGCGCCAAGGAAAAGACAGAAAATTACAAAGAGACGCAAAGGAAGAGAGTGGGTACTGAAGAAGAAGGAACAAATGAGAAGAAAAGGGAACGTTGTGCCTCCTGACTCTAAATACACGGCTCGGAAACGCAAGGCCCGTTTTTGA ATGACGTCAAGACCGGAACTTCAAGCTCCTCCAGAAATATTCTACAACGATGCTGAGGCTCGAAAATATACTTCATCCTCGCGTATCATTGAAATTCAGGCAAAAATCACAGATAGAGCATTGGAGCTTCTTGCTTTGCCTGATGACGGAGTACCCAGATTGCTTCTTGATATTGGCTGTGGATCGGGTCTAAGTGGAGAAACATTGTCGGAGCATGGACACCAATGGATTGGCTTGGATATCTCTCAATCAATGCTTAATGTTGCATTGGAGCGGGAGACTGATGGTGACCTTTTACTTGGTGACATGGGTCAGGGCTTAGGAATTCGTCCTGGAGTTATTGATGGGGCTATTAGTATCTCTGCAGTTCAGTGGTTGTGCAACGCTGACAAGTCCTCTCATAATCCACGACTAAGATTGAAGGCATTCTTTGAATCACTATACAAATGCTTAGCAAGGGGTGCAAGAGCAGTGTTGCAAGTTTATCCTGAAAATGTGCACCAACGTGAGTTGATTCTAGGTTTTGCTATGCGCGCAGGATTTGCTGGTGGTGTAGTCGTTGATTACCCACACAGTGCGAGGAGTAGAAAAGAGTACCTGGTGCTTACGTGTGGTCCACCATCCATTAGTACAACTGTTCCAAAGGGAAAGGATGGAGACTATGAGAGCTGTTCCGATGATGATATTGGTGAAGATGATGAAAATGAAACCGTTCGTATGGCAGCGCCAAGGAAAAGACAGAAAATTACAAAGAGACGCAAAGGAAGAGAGTGGGTACTGAAGAAGAAGGAACAAATGAGAAGAAAAGGGAACGTTGTGCCTCCTGACTCTAAATACACGGCTCGGAAACGCAAGGCCCGTTTTTGA MTSRPELQAPPEIFYNDAEARKYTSSSRIIEIQAKITDRALELLALPDDGVPRLLLDIGCGSGLSGETLSEHGHQWIGLDISQSMLNVALERETDGDLLLGDMGQGLGIRPGVIDGAISISAVQWLCNADKSSHNPRLRLKAFFESLYKCLARGARAVLQVYPENVHQRELILGFAMRAGFAGGVVVDYPHSARSRKEYLVLTCGPPSISTTVPKGKDGDYESCSDDDIGEDDENETVRMAAPRKRQKITKRRKGREWVLKKKEQMRRKGNVVPPDSKYTARKRKARF
BLAST of Cla002060 vs. Swiss-Prot
Match: WBS22_MOUSE (Probable 18S rRNA (guanine-N(7))-methyltransferase OS=Mus musculus GN=Wbscr22 PE=1 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 4.7e-85 Identity = 165/285 (57.89%), Postives = 200/285 (70.18%), Query Frame = 1
BLAST of Cla002060 vs. Swiss-Prot
Match: WBS22_BOVIN (Probable 18S rRNA (guanine-N(7))-methyltransferase OS=Bos taurus GN=WBSCR22 PE=2 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 3.5e-80 Identity = 158/288 (54.86%), Postives = 199/288 (69.10%), Query Frame = 1
BLAST of Cla002060 vs. Swiss-Prot
Match: WBS22_HUMAN (Probable 18S rRNA (guanine-N(7))-methyltransferase OS=Homo sapiens GN=WBSCR22 PE=1 SV=2) HSP 1 Score: 296.2 bits (757), Expect = 3.9e-79 Identity = 156/285 (54.74%), Postives = 196/285 (68.77%), Query Frame = 1
BLAST of Cla002060 vs. Swiss-Prot
Match: WBS22_DICDI (Probable 18S rRNA (guanine-N(7))-methyltransferase OS=Dictyostelium discoideum GN=DDB_G0269722 PE=3 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 3.3e-78 Identity = 146/292 (50.00%), Postives = 205/292 (70.21%), Query Frame = 1
BLAST of Cla002060 vs. Swiss-Prot
Match: BUD23_YEAST (18S rRNA (guanine(1575)-N(7))-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BUD23 PE=1 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 2.6e-67 Identity = 143/287 (49.83%), Postives = 185/287 (64.46%), Query Frame = 1
BLAST of Cla002060 vs. TrEMBL
Match: A0A0A0KQB5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G184280 PE=4 SV=1) HSP 1 Score: 571.2 bits (1471), Expect = 6.9e-160 Identity = 282/288 (97.92%), Postives = 285/288 (98.96%), Query Frame = 1
BLAST of Cla002060 vs. TrEMBL
Match: D7UBK9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0103g00250 PE=4 SV=1) HSP 1 Score: 494.6 bits (1272), Expect = 8.3e-137 Identity = 242/291 (83.16%), Postives = 267/291 (91.75%), Query Frame = 1
BLAST of Cla002060 vs. TrEMBL
Match: A0A061GRA7_THECC (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_039321 PE=4 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 2.0e-135 Identity = 240/291 (82.47%), Postives = 267/291 (91.75%), Query Frame = 1
BLAST of Cla002060 vs. TrEMBL
Match: A0A067F390_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043626mg PE=4 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 5.0e-134 Identity = 239/291 (82.13%), Postives = 265/291 (91.07%), Query Frame = 1
BLAST of Cla002060 vs. TrEMBL
Match: V4UV67_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009088mg PE=4 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 5.0e-134 Identity = 239/291 (82.13%), Postives = 265/291 (91.07%), Query Frame = 1
BLAST of Cla002060 vs. NCBI nr
Match: gi|449465850|ref|XP_004150640.1| (PREDICTED: probable 18S rRNA (guanine-N(7))-methyltransferase [Cucumis sativus]) HSP 1 Score: 571.2 bits (1471), Expect = 1.0e-159 Identity = 282/288 (97.92%), Postives = 285/288 (98.96%), Query Frame = 1
BLAST of Cla002060 vs. NCBI nr
Match: gi|659082293|ref|XP_008441765.1| (PREDICTED: ribosome biogenesis methyltransferase WBSCR22-like [Cucumis melo]) HSP 1 Score: 568.5 bits (1464), Expect = 6.5e-159 Identity = 281/288 (97.57%), Postives = 284/288 (98.61%), Query Frame = 1
BLAST of Cla002060 vs. NCBI nr
Match: gi|659082963|ref|XP_008442118.1| (PREDICTED: ribosome biogenesis methyltransferase WBSCR22-like [Cucumis melo]) HSP 1 Score: 557.0 bits (1434), Expect = 1.9e-155 Identity = 274/288 (95.14%), Postives = 281/288 (97.57%), Query Frame = 1
BLAST of Cla002060 vs. NCBI nr
Match: gi|225446283|ref|XP_002269268.1| (PREDICTED: probable 18S rRNA (guanine-N(7))-methyltransferase [Vitis vinifera]) HSP 1 Score: 494.6 bits (1272), Expect = 1.2e-136 Identity = 242/291 (83.16%), Postives = 267/291 (91.75%), Query Frame = 1
BLAST of Cla002060 vs. NCBI nr
Match: gi|720023101|ref|XP_010263231.1| (PREDICTED: probable 18S rRNA (guanine-N(7))-methyltransferase [Nelumbo nucifera]) HSP 1 Score: 492.3 bits (1266), Expect = 5.9e-136 Identity = 243/291 (83.51%), Postives = 271/291 (93.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |