Cla001996 (gene) Watermelon (97103) v1

NameCla001996
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr1 : 21378596 .. 21378766 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAGGAAAGTGATGCAGAGAGGATCACTAAGGCCGAACGCATCCAGAAGAATGTGAGGAAGATTAAAGAAGAGAAGAGAAAAGCAAAGGAGGTAGCAAAATCCAAAGAGAAGCTACCAGAGAAGAAAAAGCAAGTAAAAGAGGCGGCCAAGGCGTTTGGCGGATAG

mRNA sequence

ATGGAAGAGGAAAGTGATGCAGAGAGGATCACTAAGGCCGAACGCATCCAGAAGAATGTGAGGAAGATTAAAGAAGAGAAGAGAAAAGCAAAGGAGGTAGCAAAATCCAAAGAGAAGCTACCAGAGAAGAAAAAGCAAGTAAAAGAGGCGGCCAAGGCGTTTGGCGGATAG

Coding sequence (CDS)

ATGGAAGAGGAAAGTGATGCAGAGAGGATCACTAAGGCCGAACGCATCCAGAAGAATGTGAGGAAGATTAAAGAAGAGAAGAGAAAAGCAAAGGAGGTAGCAAAATCCAAAGAGAAGCTACCAGAGAAGAAAAAGCAAGTAAAAGAGGCGGCCAAGGCGTTTGGCGGATAG

Protein sequence

MEEESDAERITKAERIQKNVRKIKEEKRKAKEVAKSKEKLPEKKKQVKEAAKAFGG
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla001996Cla001996.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 13..40
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla001996Watermelon (97103) v2wmwmbB239
Cla001996Cucurbita maxima (Rimu)cmawmB197
Cla001996Cucurbita moschata (Rifu)cmowmB184
Cla001996Cucurbita pepo (Zucchini)cpewmB521